CmoCh17G004300 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh17G004300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionNuclear transport factor 2 (NTF2) family protein
LocationCmo_Chr17 : 2861895 .. 2868031 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATTTTCCCGCAAGAAACTTGGGAAGAAGATATTTTCACCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCAAACCATCCATGTTTGTAAATTGCAATGGCGACGATCTTCCCTTTTCAATCACGTACGTCTCTTCAAACATCTCTCAACGCCATTCGACCTAATCGCCCTCTCAAAATCTGCAAAATCCGATGTCAAGGGGAAAATCCCGCTACCGGTTCGCCGAAGAATCGAGAATCTAAGCCCGAGAATGCGGTGTTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCGCAGGAGCTTGCGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCGTACTTCGTCACAGGTTTGGGAAATTTTTGTTTATGCGAGAGATTACTATTGTGCGTTGGTTTTGTCTCTGGATGTTTGGAAGTTCTAGAGTTCTAGGGTTCTTTTGAAATCAAGATAGTTTGTTTTGTTCAATTCAAGTTGTTCTTGAAACCATAAGCAGTAAGTTGAAACTAAATCTAAACCATAAATACTCAAATTATCGGAATTATATTGAAACTTTTTAAGATCATAGAGATTAAATTCAAATTTTATCCAAACCATGGAAGCTAAATTTGTAATTTAGCATAAGTAATGATTTTCATCCTCAATATTGTTGTCCTTAACTGTGTAATAGATGAACATATGTATATTACACTGCTAACGTGGGTATATAAGGAACAATGAAGTAGGTGAATTATAGAGTAGGTTGATATTAGATGACATTATAAAAGTTTTGAATACGACAAGAAACTACTAGGCACAAAATCGAAAGTTTAGGGATTGAATAAACATTTTTTTTAATTTAGGAACTTGTTAGACACAATATTAAGAGTTCGGGGTTTGTTAACATTTTTGTAAATTTAAAGATTTTTAGACACAAGCGACTAAATTTGTAATTCAACTTCAAAAGTTGATCGACTAAAAGTGACCTCTTCAAAGTAAAAGAATGAGTATCCCGTGAGGGGCAGACTCGTTGGCAAGGGCTTAGTTTCTCTTGGATATACTAGTTTAGAGGTCCCAAGTCCGATCCTTCGGGTGAGCTTAATACCAAAAACCCTCAATGTCTCACGGGTTCGAGCCTTGGGGAGGGTGCAGGTGCCCCCAAGTATAGGGATAAAAGCTCCGACTCCCAATCAAATAAAAGTAAGTTGAAGAACATTACATTAAAAAATACTTATTCAATGAATAAAAAAGTTAGAAAAGATTGCATAAAGAATCTAATTAGCAAAACAATGAAGTGAATGTGTTCATTTATATTAACTTTGGCTGACTCATTGTAGAACTTGTGAGCAGTTTTTCCAAGTTTTGTTCATTTGTATTTGGTGATGATCAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGTGAGCTCAGTCTATAGAGATTACTGTTTTTTGTTTACTAAGCTTAGTGTTGAATTGTTGGTTGATTGGATTGAGTACAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGGTATGTTTAATTTATGATGCTTCAGAGCTAGTTTGAGATAATTTCTTGGAATGGTGTTATTTCAGTGAAGTACTTCTGGAATGAGCACTAATTAAGTTTTTTCTCTGAGAACATTCTCTGCTTTGAAATGGTAATAAAAAGTAATTTTAACCGAAATCCCACGTCGGTTAGAGAGGAGAACAAAACATTTTTTATAAGAGTGTGGAAACCTCTCTTTAGCATATGCGTTTTAAAAACCTTGAGGAGAATACCGGCCGGTGTGCCAACAAGGACGTTGGGTCCAGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAATCTTTCTCTAGCAGACGCGTTTTAAAAACCTTGAGTGAAAGCCCAAAAGGGAAAGCACAAAAAGGACAATATCTGCTAGCGGTGGGTTTGGGCCATTACAAATATTGGGGGTCCCACGTCGATTTGAGAAGGGAATGAGTGCCACCGAGGATGCTGGGCCCTGAAGGGGGGTGGATAGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCATTTTAAAAGCCTTGAGGGGAAAGCCCGAAAGGGAAACCCAAAGAGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACTTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACTTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGACAATATCTGCTAGCAATGGGTTTTGATCGTTACAAATATTGGAGGGTCCCACATCAATTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACTTAGAGAAAGGAACAAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGAGGTGGATCGTGAGATCCCACATCGGTTGGAGTGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTATAAACCTTGAGGGGAAGTCCAAACGGGAAATCTTAGAGATGACAATATCTGCTAGCGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGGTGGGTTTGGGTCATTACAAATATTGGGGGGTTCCACATCGATTAAAGAAGGGAACAAGTGCCAGTGAGGATGCTGGGCCCAAAAAGGGGTGGATTGTGAGATCCGAAGCATTATTTATAAGGGTATAGAAACCTCTCATTGGCAGACAAAATTTAAAACCTTGAGGGGAAGCTTGAAAGTGGAAACCCAAATAGGACAATATCTGCTAGTGGTGGGCTTGGGCCGTTACCGTTCGAAATCATTTTGGACTATACAACCCCTAGTAAGATGAAAATTTAAGACTACCTTCAATTGATTAATGCATTTTCTCTTCAAAAAAGATTCATAGAGTTTAAGATAAGTTTTGTGTTAAATTTGTATAGAGGTATTGTGAAGTTATTGTGAATACTCTGAGAAAAATATTGAATATTGCAGCAACTGGATATACAGAGTATTATTTTGATGCTGGATCTGGAAAAGTAAGCAGGTAAGAATGAATACCCACTTTATTATAGGCAGACCTCTAAATCCATTGGTGTTTCTGAATCTTTGTTGCTAAAGAATCACCATTTCTCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAACCAAATTTTGAGACCCACTCGAGCTTGGTTGTGGTTTAAGAAACCAGGTGCTGCCTGATTCTTCTTTCTCATTAAGAACACAGCTTAGATCATAAACCTTTTCTTGTCAATGTTTTAATTTGATCTAGAAATCATATTTTGTGGGGTAATGTAAGGAAATTATATGTAATAGAGAGTTTTTTTTTTTTTTTTTCTTTTTGTTTTTGTTTCATAAAGTATTTGTAATAGATAGAGATTTATACAGATGGAACATGGAAGAATGAGATAGTATACAGCAGGTTGATTGGTGCCTACCTTTTTCTCTGAGTGGAATCTGCC

mRNA sequence

AAAATTTTCCCGCAAGAAACTTGGGAAGAAGATATTTTCACCTCTCATGGCTGCCATTCGTTTTCGCGCGGCAAAGCTCCAAAGCATTCTGATTCAATCAACTACCAAACCATCCATGTTTGTAAATTGCAATGGCGACGATCTTCCCTTTTCAATCACGTACGTCTCTTCAAACATCTCTCAACGCCATTCGACCTAATCGCCCTCTCAAAATCTGCAAAATCCGATGTCAAGGGGAAAATCCCGCTACCGGTTCGCCGAAGAATCGAGAATCTAAGCCCGAGAATGCGGTGTTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCGCAGGAGCTTGCGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCGTACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGCAACTGGATATACAGAGTATTATTTTGATGCTGGATCTGGAAAAGTAAGCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAACCAAATTTTGAGACCCACTCGAGCTTGGTTGTGGTTTAAGAAACCAGGTGCTGCCTGATTCTTCTTTCTCATTAAGAACACAGCTTAGATCATAAACCTTTTCTTGTCAATGTTTTAATTTGATCTAGAAATCATATTTTGTGGGGTAATGTAAGGAAATTATATGTAATAGAGAGTTTTTTTTTTTTTTTTTCTTTTTGTTTTTGTTTCATAAAGTATTTGTAATAGATAGAGATTTATACAGATGGAACATGGAAGAATGAGATAGTATACAGCAGGTTGATTGGTGCCTACCTTTTTCTCTGAGTGGAATCTGCC

Coding sequence (CDS)

ATGGCGACGATCTTCCCTTTTCAATCACGTACGTCTCTTCAAACATCTCTCAACGCCATTCGACCTAATCGCCCTCTCAAAATCTGCAAAATCCGATGTCAAGGGGAAAATCCCGCTACCGGTTCGCCGAAGAATCGAGAATCTAAGCCCGAGAATGCGGTGTTGAAGGTCGCTTGGTATGGCTCCGAGCTCTTGGGGATCGCCGCTTCATTTCTCCGTCCGCCGACGGATGTTGAAACGCCTGTTAGGGCGCAGGAGCTTGCGAGAGATGTGTCCGGTGCAATTCGTCGCCCTGTGATTGTGGAAACGATTAAGAAGGATTTTGAGCGGTCGTACTTCGTCACAGGGAACCTTACTGTTGAAGCTTATGAAGAGCAGTGCGAATTTGCTGATCCGGCTGGTTCTTTCAAAGGTCTTAGCCGATTTAAAAGAAACTGTACAAATTTTGGATCCCTTGTTGATAAGTCAAACATGAAGCTTACCAAATGGGAGGATTTTGAGGACAAGGGCATTGGACATTGGAAGTTCAGTTGTATCTTGTCATTTCCTTGGAGACCAATTCTATCTGCAACTGGATATACAGAGTATTATTTTGATGCTGGATCTGGAAAAGTAAGCAGGCATGTAGAACACTGGAATGTTCCTAAAATGGCTTTACTGAACCAAATTTTGAGACCCACTCGAGCTTGGTTGTGGTTTAAGAAACCAGGTGCTGCCTGA
Homology
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BLAST of CmoCh17G004300 vs. TrEMBL
Match: A0A0A0K7I1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006760 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.7e-98
Identity = 173/207 (83.57%), Postives = 186/207 (89.86%), Query Frame = 1 

Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATI  FQ  +SL TSLN+IRPN  L+IC+I CQG NP T SP N+ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQPHSSLHTSLNSIRPNPSLRICRIHCQGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAAS+LRPP DV+TP+RAQEL  DVSG+I RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASYLRPPLDVQTPLRAQELTTDVSGSIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           +AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWE FEDKGIGHWKFSCIL
Sbjct: 121 QAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEGFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSR 208
           SFPWRPILSATGYTEYYFDA SGKV R
Sbjct: 181 SFPWRPILSATGYTEYYFDARSGKVCR 207

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BLAST of CmoCh17G004300 vs. TrEMBL
Match: F6I656_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02050 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 6.7e-92
Identity = 166/238 (69.75%), Postives = 191/238 (80.25%), Query Frame = 1 

Query: 1   MATIFPFQSRT---SLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKV 60
           M ++  F S T   S +   +  RPN   KI + RC GENP + S   +ES+PENA+LKV
Sbjct: 17  MTSLLSFTSVTPHISFRHRNDFFRPNYHHKIHRFRCDGENPRSNSSTAQESEPENALLKV 76

Query: 61  AWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGN 120
           AWYGSELLGIAASF R P+ VE P RA +LA D SGA+ R  +VETIK+DF+RSYFVTGN
Sbjct: 77  AWYGSELLGIAASFFRSPSSVEAPERAIDLAGDGSGAVDRAALVETIKEDFQRSYFVTGN 136

Query: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT+ AYE+ CEFADPAGSF+GL RFKRNCTNFGSL+ KSNMKL KWEDFEDKGIGHW+FS
Sbjct: 137 LTLSAYEDDCEFADPAGSFRGLRRFKRNCTNFGSLIQKSNMKLMKWEDFEDKGIGHWRFS 196

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKK 236
           C+LSFPW+PILSATGYTEYYFD+ SGKV RHVEHWNVPKMALL QILRP+R + W KK
Sbjct: 197 CVLSFPWKPILSATGYTEYYFDSQSGKVCRHVEHWNVPKMALLKQILRPSRGF-WGKK 253

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BLAST of CmoCh17G004300 vs. TrEMBL
Match: A0A061DSV4_THECC (Nuclear transport factor 2 family protein OS=Theobroma cacao GN=TCM_005275 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.3e-89
Identity = 155/207 (74.88%), Postives = 177/207 (85.51%), Query Frame = 1 

Query: 30  KIRCQGENPATGSPKNRESKPENAVLKVAWYGSELLGIAASFLRPPTDVETPVRAQ-ELA 89
           +IRC GENP +  P  +ES PENA+LKVAWYGSELLGIAASFLRPP++VE   +   +L 
Sbjct: 33  RIRCNGENPRSDLPTRQESAPENALLKVAWYGSELLGIAASFLRPPSNVEAAAKNDLKLG 92

Query: 90  RDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTN 149
            D SGAI R  +VETIK D+ERSYFVTG LT++AYEE CEFADPAGSFKGL RFKRNCTN
Sbjct: 93  LDGSGAIDRTAVVETIKNDYERSYFVTGQLTLDAYEENCEFADPAGSFKGLRRFKRNCTN 152

Query: 150 FGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSATGYTEYYFDAGSGKVSRH 209
           FGSL++KSNMKL KWEDFE+KG+GHW+FSC++SFPWRPILSATGYTEYYFDA SGKV RH
Sbjct: 153 FGSLIEKSNMKLMKWEDFENKGVGHWRFSCVMSFPWRPILSATGYTEYYFDAQSGKVCRH 212

Query: 210 VEHWNVPKMALLNQILRPTRAWLWFKK 236
           VEHWNVPKMALL Q+LRPTR + W K+
Sbjct: 213 VEHWNVPKMALLKQLLRPTRGF-WLKR 238

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BLAST of CmoCh17G004300 vs. TrEMBL
Match: A0A059C0X3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00102 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.9e-87
Identity = 159/244 (65.16%), Postives = 183/244 (75.00%), Query Frame = 1 

Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPL---KICKIRCQGENPATGSPKNR----ESKPENA 60
           MA I PF   T  ++S +      P    +I ++RC GENP  GS        E +PENA
Sbjct: 36  MAAILPFAPTTPRRSSGHKFASPFPASHPRIERLRCFGENPTRGSSAEAKPEPEPEPENA 95

Query: 61  VLKVAWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYF 120
           +LK AWYGSELLGIAAS  RPP   E P R  ELA D +GA  R  +VETIK+D++RSYF
Sbjct: 96  LLKAAWYGSELLGIAASLFRPPASAEAPAREFELAGDGAGAFDRSAVVETIKEDYQRSYF 155

Query: 121 VTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGH 180
           VTGNLT+ AYEE CEFADPAGSF+GL RFKRNCTNFGSL++KSNMKL KWEDFEDKG+GH
Sbjct: 156 VTGNLTLHAYEEDCEFADPAGSFRGLRRFKRNCTNFGSLIEKSNMKLMKWEDFEDKGVGH 215

Query: 181 WKFSCILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWF 238
           W+FSCILSFPWRPILSATGYTEY+++A SGKV RHVEHW VPKM LL QI +P+R W W 
Sbjct: 216 WRFSCILSFPWRPILSATGYTEYFYNAQSGKVCRHVEHWKVPKMVLLKQIFKPSR-WAWE 275

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BLAST of CmoCh17G004300 vs. TrEMBL
Match: A0A059BZM1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00102 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.4e-86
Identity = 158/242 (65.29%), Postives = 182/242 (75.21%), Query Frame = 1 

Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPL---KICKIRCQGENPATGSPKNR----ESKPENA 60
           MA I PF   T  ++S +      P    +I ++RC GENP  GS        E +PENA
Sbjct: 36  MAAILPFAPTTPRRSSGHKFASPFPASHPRIERLRCFGENPTRGSSAEAKPEPEPEPENA 95

Query: 61  VLKVAWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYF 120
           +LK AWYGSELLGIAAS  RPP   E P R  ELA D +GA  R  +VETIK+D++RSYF
Sbjct: 96  LLKAAWYGSELLGIAASLFRPPASAEAPAREFELAGDGAGAFDRSAVVETIKEDYQRSYF 155

Query: 121 VTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGH 180
           VTGNLT+ AYEE CEFADPAGSF+GL RFKRNCTNFGSL++KSNMKL KWEDFEDKG+GH
Sbjct: 156 VTGNLTLHAYEEDCEFADPAGSFRGLRRFKRNCTNFGSLIEKSNMKLMKWEDFEDKGVGH 215

Query: 181 WKFSCILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWF 236
           W+FSCILSFPWRPILSATGYTEY+++A SGKV RHVEHW VPKM LL QI +P+R W W 
Sbjct: 216 WRFSCILSFPWRPILSATGYTEYFYNAQSGKVCRHVEHWKVPKMVLLKQIFKPSR-WAWE 275

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BLAST of CmoCh17G004300 vs. TAIR10
Match: AT2G46100.1 (AT2G46100.1 Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-81
Identity = 136/208 (65.38%), Postives = 165/208 (79.33%), Query Frame = 1 

Query: 21  RPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWYGSELLGIAASFLRPPTDVET 80
           R NR  +   + C+G+NP      ++  +P+N +LK+AWYGSELLGIAAS  R P +   
Sbjct: 27  RTNRRFEATGVSCRGQNPTDEPQTSKGPEPDNVLLKIAWYGSELLGIAASVFRSP-ETSP 86

Query: 81  PVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLS 140
            V   E+  D SG   R  +V++IK+DF+RSYFVTGNLT E YEE+CEFADPAGSFKGL+
Sbjct: 87  IVTGFEVPVDCSGRAVRVAVVDSIKQDFKRSYFVTGNLTPEVYEEKCEFADPAGSFKGLA 146

Query: 141 RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCILSFPWRPILSATGYTEYYFDA 200
           RFKRNCTNFGSL++KSNMKL KWE+FEDKGIGHWKFSC++SFPW+PILSATGYTEYYFD 
Sbjct: 147 RFKRNCTNFGSLIEKSNMKLMKWENFEDKGIGHWKFSCVMSFPWKPILSATGYTEYYFDT 206

Query: 201 GSGKVSRHVEHWNVPKMALLNQILRPTR 229
            SGK+ RHVEHWNVPK+AL  Q+LRP+R
Sbjct: 207 ESGKICRHVEHWNVPKIALFKQLLRPSR 233

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BLAST of CmoCh17G004300 vs. TAIR10
Match: AT3G04890.2 (AT3G04890.2 Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-12
Identity = 33/104 (31.73%), Postives = 51/104 (49.04%), Query Frame = 1 

Query: 100 IVETIKKDFERSYFVTGNLTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMK 159
           ++  ++ D+   YFVTG LT   Y + C F DP  SF+G   ++RN       ++ ++++
Sbjct: 80  VMGILRSDYRNFYFVTGVLTSAIYSDDCIFEDPTISFQGTELYERNLKLLVPFLEDASIE 139

Query: 160 LTKWEDFEDKG----IGHWKFSCILSFPWRPILSATGYTEYYFD 200
           L   E  E       +  WK    L  PWRP++S  G T Y  D
Sbjct: 140 LQNMEKSESSQRNYILATWKLRTYLKLPWRPLISINGNTVYDLD 183

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BLAST of CmoCh17G004300 vs. NCBI nr
Match: gi|659116628|ref|XP_008458172.1| (PREDICTED: uncharacterized protein LOC103497690 [Cucumis melo])

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-117
Identity = 203/237 (85.65%), Postives = 215/237 (90.72%), Query Frame = 1 

Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATI  FQ  +SLQTSL +IRPN  L+IC+I C+G NP T SP N+ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQLHSSLQTSLYSIRPNPSLRICRIHCRGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAASFLRPP+DV+TPVRAQEL  DVSGAI RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASFLRPPSDVQTPVRAQELTTDVSGAIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           EAYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL
Sbjct: 121 EAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 238
           SFPWRPILSATGYT+YYFDA SGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 SFPWRPILSATGYTDYYFDARSGKVCRHVEHWNVPKMALLKQILRPTRDWLWFKKAG 237

[Close]
BLAST of CmoCh17G004300 vs. NCBI nr
Match: gi|449441428|ref|XP_004138484.1| (PREDICTED: uncharacterized protein LOC101218208 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 1.9e-116
Identity = 200/237 (84.39%), Postives = 213/237 (89.87%), Query Frame = 1 

Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATI  FQ  +SL TSLN+IRPN  L+IC+I CQG NP T SP N+ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQPHSSLHTSLNSIRPNPSLRICRIHCQGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAAS+LRPP DV+TP+RAQEL  DVSG+I RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASYLRPPLDVQTPLRAQELTTDVSGSIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           +AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWE FEDKGIGHWKFSCIL
Sbjct: 121 QAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEGFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKKPG 238
           SFPWRPILSATGYTEYYFDA SGKV RHVEHWNVPKMALL QILRPTR WLWFKK G
Sbjct: 181 SFPWRPILSATGYTEYYFDARSGKVCRHVEHWNVPKMALLKQILRPTREWLWFKKAG 237

[Close]
BLAST of CmoCh17G004300 vs. NCBI nr
Match: gi|700190486|gb|KGN45690.1| (hypothetical protein Csa_6G006760 [Cucumis sativus])

HSP 1 Score: 365.9 bits (938), Expect = 5.3e-98
Identity = 173/207 (83.57%), Postives = 186/207 (89.86%), Query Frame = 1 

Query: 1   MATIFPFQSRTSLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKVAWY 60
           MATI  FQ  +SL TSLN+IRPN  L+IC+I CQG NP T SP N+ESKPENAVLKVAWY
Sbjct: 1   MATIVSFQPHSSLHTSLNSIRPNPSLRICRIHCQGNNPTTDSPNNQESKPENAVLKVAWY 60

Query: 61  GSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGNLTV 120
           GSELLGIAAS+LRPP DV+TP+RAQEL  DVSG+I RP+IVETIK+DF RSYFVTGNLT+
Sbjct: 61  GSELLGIAASYLRPPLDVQTPLRAQELTTDVSGSIPRPLIVETIKEDFRRSYFVTGNLTL 120

Query: 121 EAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFSCIL 180
           +AYEEQCEFADPAGSFKGL RFKRNCTNFGSLVDKSNMKLTKWE FEDKGIGHWKFSCIL
Sbjct: 121 QAYEEQCEFADPAGSFKGLRRFKRNCTNFGSLVDKSNMKLTKWEGFEDKGIGHWKFSCIL 180

Query: 181 SFPWRPILSATGYTEYYFDAGSGKVSR 208
           SFPWRPILSATGYTEYYFDA SGKV R
Sbjct: 181 SFPWRPILSATGYTEYYFDARSGKVCR 207

[Close]
BLAST of CmoCh17G004300 vs. NCBI nr
Match: gi|225454326|ref|XP_002277369.1| (PREDICTED: uncharacterized protein LOC100258452 [Vitis vinifera])

HSP 1 Score: 345.1 bits (884), Expect = 9.6e-92
Identity = 166/238 (69.75%), Postives = 191/238 (80.25%), Query Frame = 1 

Query: 1   MATIFPFQSRT---SLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKV 60
           M ++  F S T   S +   +  RPN   KI + RC GENP + S   +ES+PENA+LKV
Sbjct: 17  MTSLLSFTSVTPHISFRHRNDFFRPNYHHKIHRFRCDGENPRSNSSTAQESEPENALLKV 76

Query: 61  AWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGN 120
           AWYGSELLGIAASF R P+ VE P RA +LA D SGA+ R  +VETIK+DF+RSYFVTGN
Sbjct: 77  AWYGSELLGIAASFFRSPSSVEAPERAIDLAGDGSGAVDRAALVETIKEDFQRSYFVTGN 136

Query: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT+ AYE+ CEFADPAGSF+GL RFKRNCTNFGSL+ KSNMKL KWEDFEDKGIGHW+FS
Sbjct: 137 LTLSAYEDDCEFADPAGSFRGLRRFKRNCTNFGSLIQKSNMKLMKWEDFEDKGIGHWRFS 196

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKK 236
           C+LSFPW+PILSATGYTEYYFD+ SGKV RHVEHWNVPKMALL QILRP+R + W KK
Sbjct: 197 CVLSFPWKPILSATGYTEYYFDSQSGKVCRHVEHWNVPKMALLKQILRPSRGF-WGKK 253

[Close]
BLAST of CmoCh17G004300 vs. NCBI nr
Match: gi|297745341|emb|CBI40421.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 345.1 bits (884), Expect = 9.6e-92
Identity = 166/238 (69.75%), Postives = 191/238 (80.25%), Query Frame = 1 

Query: 1   MATIFPFQSRT---SLQTSLNAIRPNRPLKICKIRCQGENPATGSPKNRESKPENAVLKV 60
           M ++  F S T   S +   +  RPN   KI + RC GENP + S   +ES+PENA+LKV
Sbjct: 1   MTSLLSFTSVTPHISFRHRNDFFRPNYHHKIHRFRCDGENPRSNSSTAQESEPENALLKV 60

Query: 61  AWYGSELLGIAASFLRPPTDVETPVRAQELARDVSGAIRRPVIVETIKKDFERSYFVTGN 120
           AWYGSELLGIAASF R P+ VE P RA +LA D SGA+ R  +VETIK+DF+RSYFVTGN
Sbjct: 61  AWYGSELLGIAASFFRSPSSVEAPERAIDLAGDGSGAVDRAALVETIKEDFQRSYFVTGN 120

Query: 121 LTVEAYEEQCEFADPAGSFKGLSRFKRNCTNFGSLVDKSNMKLTKWEDFEDKGIGHWKFS 180
           LT+ AYE+ CEFADPAGSF+GL RFKRNCTNFGSL+ KSNMKL KWEDFEDKGIGHW+FS
Sbjct: 121 LTLSAYEDDCEFADPAGSFRGLRRFKRNCTNFGSLIQKSNMKLMKWEDFEDKGIGHWRFS 180

Query: 181 CILSFPWRPILSATGYTEYYFDAGSGKVSRHVEHWNVPKMALLNQILRPTRAWLWFKK 236
           C+LSFPW+PILSATGYTEYYFD+ SGKV RHVEHWNVPKMALL QILRP+R + W KK
Sbjct: 181 CVLSFPWKPILSATGYTEYYFDSQSGKVCRHVEHWNVPKMALLKQILRPSRGF-WGKK 237

The following BLAST results are available for this feature:
BLAST of CmoCh17G004300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh17G004300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7I1_CUCSA3.7e-9883.57Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006760 PE=4 SV=1[more]
F6I656_VITVI6.7e-9269.75Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02050 PE=4 SV=... [more]
A0A061DSV4_THECC5.3e-8974.88Nuclear transport factor 2 family protein OS=Theobroma cacao GN=TCM_005275 PE=4 ... [more]
A0A059C0X3_EUCGR2.9e-8765.16Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00102 PE=4 SV=1[more]
A0A059BZM1_EUCGR1.4e-8665.29Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00102 PE=4 SV=1[more]
BLAST of CmoCh17G004300 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46100.11.6e-8165.38 Nuclear transport factor 2 (NTF2) family protein[more]
AT3G04890.26.1e-1231.73 Uncharacterized conserved protein (DUF2358)[more]
BLAST of CmoCh17G004300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116628|ref|XP_008458172.1|1.7e-11785.65PREDICTED: uncharacterized protein LOC103497690 [Cucumis melo][more]
gi|449441428|ref|XP_004138484.1|1.9e-11684.39PREDICTED: uncharacterized protein LOC101218208 [Cucumis sativus][more]
gi|700190486|gb|KGN45690.1|5.3e-9883.57hypothetical protein Csa_6G006760 [Cucumis sativus][more]
gi|225454326|ref|XP_002277369.1|9.6e-9269.75PREDICTED: uncharacterized protein LOC100258452 [Vitis vinifera][more]
gi|297745341|emb|CBI40421.3|9.6e-9269.75unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009536 plastid
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G004300.1CmoCh17G004300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018790Protein of unknown function DUF2358PFAMPF10184DUF2358coord: 100..208
score: 8.0
NoneNo IPR availablePANTHERPTHR34123FAMILY NOT NAMEDcoord: 21..237
score: 1.1E
NoneNo IPR availablePANTHERPTHR34123:SF1SUBFAMILY NOT NAMEDcoord: 21..237
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh17G004300Cucsa.135740Cucumber (Gy14) v1cgycmoB0368
CmoCh17G004300CmaCh17G004530Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G004300Cla006631Watermelon (97103) v1cmowmB346
CmoCh17G004300Csa6G006760Cucumber (Chinese Long) v2cmocuB357
CmoCh17G004300MELO3C021185Melon (DHL92) v3.5.1cmomeB306
CmoCh17G004300ClCG06G003450Watermelon (Charleston Gray)cmowcgB325
CmoCh17G004300CSPI06G00770Wild cucumber (PI 183967)cmocpiB360
CmoCh17G004300Lsi09G015920Bottle gourd (USVL1VR-Ls)cmolsiB320
CmoCh17G004300Cp4.1LG12g03870Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G004300MELO3C021185.2Melon (DHL92) v3.6.1cmomedB351
CmoCh17G004300CsaV3_6G000860Cucumber (Chinese Long) v3cmocucB0432
CmoCh17G004300Cla97C06G112820Watermelon (97103) v2cmowmbB361
CmoCh17G004300Bhi12G001689Wax gourdcmowgoB0458
CmoCh17G004300CsGy6G000840Cucumber (Gy14) v2cgybcmoB733
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G004300Cucurbita moschata (Rifu)cmocmoB240
CmoCh17G004300Cucurbita moschata (Rifu)cmocmoB321
CmoCh17G004300Cucumber (Gy14) v1cgycmoB0828
CmoCh17G004300Cucurbita maxima (Rimu)cmacmoB898
CmoCh17G004300Melon (DHL92) v3.5.1cmomeB305
CmoCh17G004300Watermelon (Charleston Gray)cmowcgB311
CmoCh17G004300Watermelon (97103) v1cmowmB343
CmoCh17G004300Cucurbita pepo (Zucchini)cmocpeB341
CmoCh17G004300Cucumber (Gy14) v2cgybcmoB599
CmoCh17G004300Melon (DHL92) v3.6.1cmomedB350
CmoCh17G004300Silver-seed gourdcarcmoB0819