CmoCh17G003180 (gene) Cucurbita moschata (Rifu)

NameCmoCh17G003180
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr17 : 1922721 .. 1925526 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGTGCTCCTGTTGGTGATGCTAAACCTCAAATATAAGATCGATCAACTCAACTGGAAGTTTTTTATGTGTTTCTTCTGAAAATCTAGATAAGATTCCTGGGATTGGGCTTGAACGAATAATGTATTTTGGTAGAGGTTGTATCTATGGAAGACATTTATTTTTGAAGGAGTTTGAGTAGGAGCAATATTTCAATTGGTAGCATTCTTTATCATTTTCTCTTTTGATGGAGCTTTTGGGAGTTCACATTCGTTTAGATTATAGAAATTTTTCAAAATGTGTCCCTCCTATTAATCCCATTATTGTCACCCAATACCTTAAATGCTATCTAATTGTAAGTTATTGGGTCTACAAAGTACAAACAAGGAGGTCGAGTACAGAGTTTTCCGGGAGATAAACTTCACAGATTTCGTAACTATTTTCATCAAATTTGAACTAAAACAGGATATGCCAAATAATCTGCTGTGTTAGAAGCAATATTTGAATCTCATTTTCACATGTTCGTGAATCCTGTATTATATACTCAAATGATTCGAAACAATAATGGGCAAGGATGTGCATAAAAATGAAAAATTTTAAGGGAAGGAAAGGATGGAATGATGATCAAAAGGACATTTAAGTAAAGACTTGAGCTTCACTTCAATATTTGAAGAATGTAAAGATGCAGATCAGTATCTTATTTCAGTTTGTACAACGGTTATGACTTTATTTGAAAAATGGATCATAAAAACTTCATGCGGAAGTGATATAGAAAAATTACAGAGTCGTACCACTCCAGCGTCATTGATGATCAACGGTGCCAAGTGATTGGCTCAGCACAACTCCGATAAACCTTTGGGTCTTAGCCCTCGTGATCCAGCCATGAGTGTCCCGTTCTGCATCTGAGCATAGAGTCTCACAACTTCAAAATCCATCAATATAACCTGCTTTAATTTAAAACAGGATCGGTTTCCCATCAGTTGGTGAGTTATGAATATCATACTTTCACAGGAAAAACGGTATAGATGTATGTTTTTTTTTTTTTTTTTTTTTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTTTTTTTTTTTTTTTTTTTTTTGGGATAAGAGACAGAGACTTCAGTAGTAATGATTTCTTTTTCAGGGATCATATAGAGACAGGTTCATTAAACAATCTAAGTCTAAACCACCTAACACATGAGAGACACAAAAGACTAGTTCAAATGGGATAAAAAGCTTCAAAAAATAACAAAACTTAATATTGCAGTCTTTATATTCAAGCAAAGTTAACAACTGAAGTAGCAAACAACAAGACTTGGATAATAACGCCTAAGAAATGAGAGAACCCCTGTTTACCTTTATGCAAACCCGAGATTATTCATCTTCTCGCAATGAGGAGTTGGGAGATTTTTATTCCACTTGCGTCTCTGGAGTTCTATATGACAATAACGCCAAACCATGTTTTTGTAATCCCTAATCACACTACTCTCTATTTCAGATCGAGCTCCGCTTCCAAGAGGATATCTTTCATCAAAATCTGATGATTTGACAAAAAACTCCACTCCATGTTTCTCCGTAGCCATGGGAATACTGTAGGATAGATTTTTATGCAAAGAATAGTCTGGCTCTGGAAAGGGCATATAAGCCAACAAGACAATTAACAAGAATGGTAACATTAGAAGTAAAATCAACAAGTTGGGACCTCCCCCATCAGATTCTGTCCTCCGTTGGCTTCTCGCACCTCCAGTGCTATAAGTATAAGCACGACTCGTCTGAAACATATTTCCTTGCCCAAAGAACGCCCTGAATATCTCATCAGGATCAAAATTTTCTTCAAACAAATCACGACCAGTTCTCCTGCGCCTTACATTATGCTGTTGGTTGTACTCATATTGATCAACCAAAGCTGTGTGGTCATATTGCCTTCTCGACGTGTCATTGCTCAAACACATGAAAGCCTTGGATAATTTCTTGAATGCTTCATCTGAACCAGGAGCCTTGTTCTTATCAGGGTGAACTTTCAAGGACAATTTCTTATAAGCTCTCTTAATTTCTTCAGCCGAACTAGTTTTCTCCACACCGAGAATTTTGTAATAGTCCTTAGCTGTTTTTATCTGCCTGATCAATTGAACATGTTCAATACTGTAATTACGTTCACCATTCAAACCGTCAACATGATTCGCCGAACCAGAAACACTATGAACTTTTCCCGCGCGTTTCCCATCGGAGGAAGATGAAGGTGATTTCGAGTCAATATCCTCGCACGCCGACAATAACTCGTTCACTTCCAAACTCCGATTAAGGCGACAAGCAATTTTAATGAATTTAAGTGCTCGCTCTTTATTCCCCGATGCAATTGCTTCTTCCGCTATGCGAATACATCTTAAAGCTTCGTCCTTATTCCCATCCATAATCGCACCGACACAATCTTTCAAAGAAAACCCTAAACCGCCGGATTTCCTTCAGCACAATTTCATATACAATTCCAACTATACTGATAACAAATTCGAGACAGATAAGACCTAA

mRNA sequence

ATGCAGAGTGCTCCTGTTGATAAGATTCCTGGGATTGGGCTTGAACGAATAATAGACAGAGACTTCAGTAGTAATGATTTCTTTTTCAGGGATCATATAGAGACAGGTGATTTCGAGTCAATATCCTCGCACGCCGACAATAACTCGTTCACTTCCAAACTCCGATTAAGGCGACAAGCAATTTTAATGAATTTAAGTGCTCGCTCTTTATTCCCCGATGCAATTGCTTCTTCCGCTATGCGAATACATCTTAAAGCTTCGTCCTTATTCCCATCCATAATCGCACCGACACAATCTTTCAAAGAAAACCCTAAACCGCCGGATTTCCTTCAGCACAATTTCATATACAATTCCAACTATACTGATAACAAATTCGAGACAGATAAGACCTAA

Coding sequence (CDS)

ATGCAGAGTGCTCCTGTTGATAAGATTCCTGGGATTGGGCTTGAACGAATAATAGACAGAGACTTCAGTAGTAATGATTTCTTTTTCAGGGATCATATAGAGACAGGTGATTTCGAGTCAATATCCTCGCACGCCGACAATAACTCGTTCACTTCCAAACTCCGATTAAGGCGACAAGCAATTTTAATGAATTTAAGTGCTCGCTCTTTATTCCCCGATGCAATTGCTTCTTCCGCTATGCGAATACATCTTAAAGCTTCGTCCTTATTCCCATCCATAATCGCACCGACACAATCTTTCAAAGAAAACCCTAAACCGCCGGATTTCCTTCAGCACAATTTCATATACAATTCCAACTATACTGATAACAAATTCGAGACAGATAAGACCTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh17G003180.1CmoCh17G003180.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh17G003180Cucurbita pepo (Zucchini)cmocpeB334
CmoCh17G003180Cucurbita pepo (Zucchini)cmocpeB335
CmoCh17G003180Cucurbita pepo (Zucchini)cmocpeB340
CmoCh17G003180Cucurbita pepo (Zucchini)cmocpeB365
CmoCh17G003180Cucurbita pepo (Zucchini)cmocpeB373
CmoCh17G003180Bottle gourd (USVL1VR-Ls)cmolsiB320
CmoCh17G003180Bottle gourd (USVL1VR-Ls)cmolsiB331
CmoCh17G003180Bottle gourd (USVL1VR-Ls)cmolsiB339
CmoCh17G003180Bottle gourd (USVL1VR-Ls)cmolsiB342
CmoCh17G003180Cucumber (Gy14) v2cgybcmoB317
CmoCh17G003180Melon (DHL92) v3.6.1cmomedB351
CmoCh17G003180Melon (DHL92) v3.6.1cmomedB384
CmoCh17G003180Melon (DHL92) v3.6.1cmomedB385
CmoCh17G003180Silver-seed gourdcarcmoB0097
CmoCh17G003180Silver-seed gourdcarcmoB0824
CmoCh17G003180Silver-seed gourdcarcmoB0958
CmoCh17G003180Cucumber (Chinese Long) v3cmocucB0416
CmoCh17G003180Cucumber (Chinese Long) v3cmocucB0420
CmoCh17G003180Cucumber (Chinese Long) v3cmocucB0442
CmoCh17G003180Cucumber (Chinese Long) v3cmocucB0443
CmoCh17G003180Watermelon (97103) v2cmowmbB347
CmoCh17G003180Watermelon (97103) v2cmowmbB351
CmoCh17G003180Watermelon (97103) v2cmowmbB361
CmoCh17G003180Wax gourdcmowgoB0462
CmoCh17G003180Wax gourdcmowgoB0472
CmoCh17G003180Cucurbita moschata (Rifu)cmocmoB196
CmoCh17G003180Cucurbita moschata (Rifu)cmocmoB198
CmoCh17G003180Cucurbita moschata (Rifu)cmocmoB308
CmoCh17G003180Cucurbita moschata (Rifu)cmocmoB310
CmoCh17G003180Cucumber (Gy14) v1cgycmoB0106
CmoCh17G003180Cucumber (Gy14) v1cgycmoB0178
CmoCh17G003180Cucumber (Gy14) v1cgycmoB0707
CmoCh17G003180Cucurbita maxima (Rimu)cmacmoB251
CmoCh17G003180Cucurbita maxima (Rimu)cmacmoB353
CmoCh17G003180Cucurbita maxima (Rimu)cmacmoB810
CmoCh17G003180Cucurbita maxima (Rimu)cmacmoB887
CmoCh17G003180Wild cucumber (PI 183967)cmocpiB349
CmoCh17G003180Wild cucumber (PI 183967)cmocpiB352
CmoCh17G003180Cucumber (Chinese Long) v2cmocuB342
CmoCh17G003180Cucumber (Chinese Long) v2cmocuB345
CmoCh17G003180Melon (DHL92) v3.5.1cmomeB306
CmoCh17G003180Melon (DHL92) v3.5.1cmomeB334
CmoCh17G003180Melon (DHL92) v3.5.1cmomeB335
CmoCh17G003180Watermelon (Charleston Gray)cmowcgB312
CmoCh17G003180Watermelon (Charleston Gray)cmowcgB316
CmoCh17G003180Watermelon (Charleston Gray)cmowcgB325
CmoCh17G003180Watermelon (97103) v1cmowmB341
CmoCh17G003180Watermelon (97103) v1cmowmB344
CmoCh17G003180Watermelon (97103) v1cmowmB353