CmoCh17G001670 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCATCGCTTTGTTTCCCTTTGCTTATTTTCTCGAAAGGTACTGTGATTTTCATCTTGAATTCGTCTTTTTTATTCTAATTCATCAAAGATAGAGAAAGAAACAAAAGATGGAATTTGAACATCTTCTCCATCATTTGATCACATAAATCCTCAGAACTTGAGGATTATCGTGAAATCCAACATCGGTTGGAGAGAAGAACGAAACATTCCTTATAATTGTGGGGAAACCTCTCTTTAATAGACGCGTTAGAAAAAACTGTGAGGCTAACAATGTTATGTAACGGGTAAGAACGGACAATATCTACTACAAATGGTATCAGAGTGAGCAGTGTACTGGCAAGGACACTAACCCCCAATGGGGTGTGGATTGTGAGATCCCCACATAAGTTGGAGAGAAAAAACGAAACATTTCTTATAAGAGCGTGAAAACCTCTCCCTAACAGACACGTTTTTAAAATCGTGAGACTGATGACGCTACGTAACGGGTCAAAATAGATAATAACTATTAGCGTTGGGCTTGGGTTGTATGAACATTTCTTTTACCCGTATGAACGTTTCTTTGGTTTATGTAGAAAATCAAGACCGAGGATCACGATGACATTATTCTTAGAAATTTTTGTTCTTTCACTTTTCGGGTAAGTTTCGATTAATGTCACACATTTAATTCATTCCGATATCTAAACGAAATGAAATTGCAGGTCGAGTTTGAGTCAAAACATGTACTACTCAAGCATGAGATACACATCTCCTACCTTCCTCTCATCAATGGTTAACACTATAGCTTGCTTGACATTCATAATTGCAGTGATGTTCAAGTTCAGTTCTTTAGATTTTCACGAACTTAAAAACTATTGATGAACACATATTTGATCGAAATGAAGAACTGATACTCTTAACTCTTTGATCATGGGCAGATTGGAGGTTGTTGACCTTCGAAATCCAAGAGGAATAGCCAAAGTGTTGGGGACATTGGTTTCATTGGGCGGTGCGATGGTAATGACTTTCTATAAGGGACCCATCATTAGAAATCTGTGGCATCCTTTAATCCATATGCAACACACAGCTACTCATCATGTTCATGAGAATTGGCTTAAGGGTTCGGTTCTTACTGTTTCAAGCTGCATTTCTTGGGCCCTTTCCTACATTATGCAGGTCCCTTAATCCTCATTTAAACTCCCTACTAAATTTTATAACTTTTGTAAGTTTCATCTTCTTAACCTGTTCTAAATATTTCTCGTTGTCGTCGTTGCCATCGTCAAAAGCCTAGTCTAGATTTCAAACGACGAAGAATGGTCATTCTTCACTCGGATCTAGAATGACGAGGGTGGGGGCAATGTTGACGATATGAGATAATGTTGTGTTATGATGTCTGCTGCTCATTTATAGCTTAAACTATATATGGAAACTGGGAGTGGTCAAATTATATATGGTAGATGAACGGGTTAAAACGGGCCAATATCTATTAGTAGTGGGCCTCGGGTTGTTACAAAATGGTTCGGAGCTAGATATTGGGCGATGTGTTAGCAAGGACTTTGGCCACTGAGAGGGTGGATTGTGAGATCCCACGTCAGTTGGAGAGGGGAACAACCCACTCTTTATAAGGGTATGGAAACCTTCCCTAGTAGATGTGTTTTAAAAACCGTGAGGTTGACGACGATACATAACAGGCCAGAGTGAACAATATCGGCTAGCGGTGGGATTGAGTTGTTACAAATGGTACCAGAGCCAGTCACCGGGCAGTGTGTCAATGAGTTTGTTGGCCCCCGAGAGGGTGGATTGTGAGATTCCACGTCAGCTGGAGGAACGAAACATTACTTATAAGGGTGTGGAAACCTCTCACTAGCAAACATTACTTTCTTCATTCTCTGTATTCTATCAGGCATGAAATCATCAATATAATCCTTTAGTCAATACTCTTCTTTGCATTTTTTTCTTTCTCTCTGTTCTTTGTGTTCATCTAGATTGAATGTGTACTTTGTTGCACGACACATCACCATTGTTTTGAACAATAGATATGTATATATATTAATCTCAGGTAAAATATGCAGGCATTTACATTAAAACGATACCCGGCTCAGCTATCGCTAACGACATGGATGAACCTGATCGGAGCAGCACAAACAGGCGTGTTCGCACTGTTGACACAACACAAGCCAGGAGTTTGGAAGGTTGGAATCAACATTGATCTATGGTGCATTATCTATGCTGTAAGGAAACTCAGGAAAGCAACCTTGATAGCCTCAGATTGTGATGTGTTATAGTGATGCTAGAAATGAATACTCGCAGGGCATTGTGGGCTCAGCTTTGGTGGTATATATACAACTTTGGTGCACTGAAAAAAAAGGCCCAGTTTTCGCGACCATGTACAGTCCACTTGGTGCCGTTTTGGTTGCGCTTTTGGCTTACTTTGTTCTTGGACAAAGGCTTTACGTCGGCAGGTAAGAAGCTTCATATCTTTATAATGGACATTGAGATGAACACTAAATTTTATGCTATTGTTCTATTTCTGTAGCATTGTTGGTGGAGTTATCGTGGTGGTTGGGCTTTATTTATTGTTATGGGGCAAAGAAGATGAACATATGCTTCAAGATGACTCAATCGCTAGTAAAAATGTTTCACAAGATGAGCCTTAGTTCGTATGCTCGTGGAATAGATTATCATTGAACGTTTCTTGTTTAG TACCATCGCTTTGTTTCCCTTTGCTTATTTTCTCGAAAGAAAATCAAGACCGAGGATCACGATGACATTATTCTTAGAAATTTTTGTTCTTTCACTTTTCGGGTCGAGTTTGAGTCAAAACATGTACTACTCAAGCATGAGATACACATCTCCTACCTTCCTCTCATCAATGATTGGAGGTTGTTGACCTTCGAAATCCAAGAGGAATAGCCAAAGTGTTGGGGACATTGGTTTCATTGGGCGGTGCGATGGTAATGACTTTCTATAAGGGACCCATCATTAGAAATCTGTGGCATCCTTTAATCCATATGCAACACACAGCTACTCATCATGTTCATGAGAATTGGCTTAAGGGTTCGGTTCTTACTGTTTCAAGCTGCATTTCTTGGGCCCTTTCCTACATTATGCAGGCATTTACATTAAAACGATACCCGGCTCAGCTATCGCTAACGACATGGATGAACCTGATCGGAGCAGCACAAACAGGCGTGTTCGCACTGTTGACACAACACAAGCCAGGAGTTTGGAAGGTTGGAATCAACATTGATCTATGGTGCATTATCTATGCTGGCATTGTGGGCTCAGCTTTGGTGGTATATATACAACTTTGGTGCACTGAAAAAAAAGGCCCAGTTTTCGCGACCATGTACAGTCCACTTGGTGCCGTTTTGGTTGCGCTTTTGGCTTACTTTGTTCTTGGACAAAGGCTTTACGTCGGCAGCATTGTTGGTGGAGTTATCGTGGTGGTTGGGCTTTATTTATTGTTATGGGGCAAAGAAGATGAACATATGCTTCAAGATGACTCAATCGCTAGTAAAAATGTTTCACAAGATGAGCCTTAGTTCGTATGCTCGTGGAATAGATTATCATTGAACGTTTCTTGTTTAG ATGGTAATGACTTTCTATAAGGGACCCATCATTAGAAATCTGTGGCATCCTTTAATCCATATGCAACACACAGCTACTCATCATGTTCATGAGAATTGGCTTAAGGGTTCGGTTCTTACTGTTTCAAGCTGCATTTCTTGGGCCCTTTCCTACATTATGCAGGCATTTACATTAAAACGATACCCGGCTCAGCTATCGCTAACGACATGGATGAACCTGATCGGAGCAGCACAAACAGGCGTGTTCGCACTGTTGACACAACACAAGCCAGGAGTTTGGAAGGTTGGAATCAACATTGATCTATGGTGCATTATCTATGCTGGCATTGTGGGCTCAGCTTTGGTGGTATATATACAACTTTGGTGCACTGAAAAAAAAGGCCCAGTTTTCGCGACCATGTACAGTCCACTTGGTGCCGTTTTGGTTGCGCTTTTGGCTTACTTTGTTCTTGGACAAAGGCTTTACGTCGGCAGCATTGTTGGTGGAGTTATCGTGGTGGTTGGGCTTTATTTATTGTTATGGGGCAAAGAAGATGAACATATGCTTCAAGATGACTCAATCGCTAGTAAAAATGTTTCACAAGATGAGCCTTAG
BLAST of CmoCh17G001670 vs. Swiss-Prot
Match: WTR31_ARATH (WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 8.1e-36 Identity = 76/200 (38.00%), Postives = 123/200 (61.50%), Query Frame = 1
BLAST of CmoCh17G001670 vs. Swiss-Prot
Match: WTR38_ARATH (WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 7.5e-34 Identity = 72/191 (37.70%), Postives = 121/191 (63.35%), Query Frame = 1
BLAST of CmoCh17G001670 vs. Swiss-Prot
Match: 5NG4_PINTA (Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.3e-33 Identity = 70/206 (33.98%), Postives = 121/206 (58.74%), Query Frame = 1
BLAST of CmoCh17G001670 vs. Swiss-Prot
Match: WTR32_ARATH (WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30 Identity = 70/201 (34.83%), Postives = 116/201 (57.71%), Query Frame = 1
BLAST of CmoCh17G001670 vs. Swiss-Prot
Match: WTR13_ARATH (WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30 Identity = 71/197 (36.04%), Postives = 115/197 (58.38%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TrEMBL
Match: A0A0A0LLJ5_CUCSA (WAT1-related protein OS=Cucumis sativus GN=Csa_2G179220 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 2.5e-76 Identity = 137/196 (69.90%), Postives = 172/196 (87.76%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TrEMBL
Match: A0A061EMV3_THECC (WAT1-related protein OS=Theobroma cacao GN=TCM_020864 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.3e-68 Identity = 120/198 (60.61%), Postives = 160/198 (80.81%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TrEMBL
Match: A0A061ELT3_THECC (WAT1-related protein OS=Theobroma cacao GN=TCM_020864 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.3e-68 Identity = 120/198 (60.61%), Postives = 160/198 (80.81%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TrEMBL
Match: A0A061EUQ0_THECC (WAT1-related protein (Fragment) OS=Theobroma cacao GN=TCM_020864 PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 7.3e-68 Identity = 120/198 (60.61%), Postives = 160/198 (80.81%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TrEMBL
Match: M5XGK5_PRUPE (WAT1-related protein OS=Prunus persica GN=PRUPE_ppa015276mg PE=3 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 3.6e-67 Identity = 121/196 (61.73%), Postives = 155/196 (79.08%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TAIR10
Match: AT4G08290.1 (AT4G08290.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 151.8 bits (382), Expect = 4.5e-37 Identity = 76/200 (38.00%), Postives = 123/200 (61.50%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TAIR10
Match: AT5G07050.1 (AT5G07050.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 145.2 bits (365), Expect = 4.3e-35 Identity = 72/191 (37.70%), Postives = 121/191 (63.35%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TAIR10
Match: AT4G08300.1 (AT4G08300.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 134.0 bits (336), Expect = 9.8e-32 Identity = 70/201 (34.83%), Postives = 116/201 (57.71%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TAIR10
Match: AT2G37460.1 (AT2G37460.1 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 134.0 bits (336), Expect = 9.8e-32 Identity = 71/197 (36.04%), Postives = 115/197 (58.38%), Query Frame = 1
BLAST of CmoCh17G001670 vs. TAIR10
Match: AT2G37450.2 (AT2G37450.2 nodulin MtN21 /EamA-like transporter family protein) HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31 Identity = 77/202 (38.12%), Postives = 116/202 (57.43%), Query Frame = 1
BLAST of CmoCh17G001670 vs. NCBI nr
Match: gi|449449012|ref|XP_004142259.1| (PREDICTED: WAT1-related protein At4g08300-like [Cucumis sativus]) HSP 1 Score: 293.1 bits (749), Expect = 3.6e-76 Identity = 137/196 (69.90%), Postives = 172/196 (87.76%), Query Frame = 1
BLAST of CmoCh17G001670 vs. NCBI nr
Match: gi|700206493|gb|KGN61612.1| (hypothetical protein Csa_2G179220 [Cucumis sativus]) HSP 1 Score: 293.1 bits (749), Expect = 3.6e-76 Identity = 137/196 (69.90%), Postives = 172/196 (87.76%), Query Frame = 1
BLAST of CmoCh17G001670 vs. NCBI nr
Match: gi|659121384|ref|XP_008460633.1| (PREDICTED: LOW QUALITY PROTEIN: WAT1-related protein At4g08300-like [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74 Identity = 130/179 (72.63%), Postives = 162/179 (90.50%), Query Frame = 1
BLAST of CmoCh17G001670 vs. NCBI nr
Match: gi|590659275|ref|XP_007035083.1| (Nodulin MtN21 /EamA-like transporter family protein isoform 2, partial [Theobroma cacao]) HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67 Identity = 120/198 (60.61%), Postives = 160/198 (80.81%), Query Frame = 1
BLAST of CmoCh17G001670 vs. NCBI nr
Match: gi|590659279|ref|XP_007035084.1| (Nodulin MtN21 /EamA-like transporter family protein isoform 3 [Theobroma cacao]) HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67 Identity = 120/198 (60.61%), Postives = 160/198 (80.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |