CmoCh17G001030 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGATAAATTAAATTGCATTTCAAATAGATGCCAGTGATTCTTCCGAAGATTTGAACCTTTTTTTCGTTGCTAATCAATTAGGGCTCTGGGAAATTGCGAGATTGATCCTACAAGTTCATTTTCCGGGCGATTCGAACGCCGTGAAAATCAGAATCTTTCGAGCGGGAAATTCAGAAGAGGAAGAAGATGAACGTGTTCAGATTGGCTGGGGATATGACCCATTTGGCCAGCATTCTGGTTTTGCTCCTCAAAATTCATACTATCAAGTCTTGTGCTGGTTCGTTTTCCTTCTCTAATTTTGCGCGTTTTTGGAATTTGACACTGTTTTTTTGCTTGTGAACTCTGTAATGCATTTCCGTTTTTGGAGCCAAATTGCATTCCATATCGTCTATGATTGGTCGTTCAAGAAAGGGGGAAATGAGTCTCAAACCCTAGATACTAGTTCTCAGTTTGGATAAGAGACGAGTTTGATATATTCTAGTCGTTGGCTGCCGAGCGATAAGAGTAGGCTGGAGTCGTCCTATCTACTTAGAAAGTTTTTCGAAGACTCTAATATTATCAAAATCAAGCCTCGCCCAACAACAGTACAATGCAGGGACTTCCCTCACACTTCTAATAGAACCAAGAGACTAGCTATATCTTTTGCGTGCTTCCTGTTGACTCCACTTCCATGGGAAACTAGTTCTCGGGTTGGATAAGAGCGAGTTTGATAAATTCTAGTCGTTGGCTGCCGAACGACAAGAATAAGCAGGAGTCATCCTATCTGCCTAGAAAGTTTTTCGAAGACCTTCTTGATAATCAAGCCTCACCCAACTACGATACAACATGGGACATATATTTTTTATCTCACACTTCTAATAGAACTAGGAGACTAGCTATATCTCTTGTGTGCTTTCTTGTTTACTCCACATCCCTCGTGTCAGTGGGATAGAGTAGCTCAGTTGTTTAGTGTACCAAGTTTGTACCGAGAGCAAGTTTAGAGAACTTGCCCATGCTTTCCACTCTCGTGTCAATGGGATAGACTAGCTATATCTCTTGCGTGCTCCTTGTTGACTCCGCTTCCCTCGTGCCAGCGGGATAGAGTAGCTTGGTTGTTTGGTGTACCAAATTTGTACCGAGAACAAGTGAAGAGAACTTGCTCATGCTTTCTAGACTCTAGCCTCACCCACCTACAGTACAACATGGAGACATTTTTTTTATCTCACACTTCTAATAGAACCAAGAGTCTAGCTATATCTATTGCATGCTTCCCTCTTGACTCCACTTCCCTCGTGTCAGTGGGATAGAGTAGCTATGGTTGTTTGGTGTACTAAGTTTGTATCGAAAGCAAGTAAAGAGAACTTGCTCACGCTTTCCAGGCCGTAGAGTGGCACGTGTAATTACCAAAACAAATATTGTTTGTATGGTTGGATGTGATGACAATTGGTGCTCATTGTAGAATGTGGAGAAGGGATTAGTTTGGAGGGAGTTCTTGATTTTCCTGCTCTTTTGGTAATTTGATTCGTATTAGAGCATTGAGCTATATATTGTTATGCTAGCATTATCATGTCTGAATCTGAGTACTGATTCTGCAGGCATTTCTTTGAAGACTCAAGAACTTTACGCCCTGGTTTTCGTTACCCGTTATTTGGATATATTTGACAGATTTGCATCAGTATATAATTTGATAATGAAATTAATATTTCTGGGGAGTTCTCTCTCCATTGTTTGGTATATGCGACGTCACAAAGTCGTGCGTAGATCGTACGACAAGGACCAGGACACGTTTCGTTATCAATTTATCGTGCTGCCTTGTCTGCTGTTGGCTCTGGTTGTTAATCATAAATTTACATTTAAAGAGGTACATTTAATGTTCCTTTTTCTTTTGTTTCTTTTGAACTGGATCATATCACATCCTAGGTTCACTGATCTCATCTATGCTGAAGATGTGTTAGTTCATCGCATTATAGATGTATGTAGCTTGGTATAATTTTTCTGCCCATGTTCTTTGATCTTAATGAATCGAAACGAGTAGGTTATGTGGACGTTTTCTCTATATGTCGAAGCCGTTGCCATTCTTCCTCAATTGGTGTTGCTACAAAGGACAAGGAATATCGACAATTTAACGGGACAATACGTCTTCCTTCTTGGGTAACTCTCCATTCCCAATCTTCTGAGTATTTGTAGCTTGAATCCGTACATAATCTCCTCGTTTTCTTCTCTTTTCTCTTTTCAGCGCGTACCGTGCATTGTACATATTGAATTGGATCTATCGCTACTTAACCGAACCTTACTTTGTTCATTGGATAAGTATGTTTCTCTCCTTTCTCACATACACGTGCACATACACGCACAGACGAAAATATTCGTTAACAAGGAACTAAATTAGCTACTCGTCCAACAAATTCACTCTTGCAGCATGGACGGCTGGTCTCGTGCAAACGTTGCTGTATGCTGATTTCTTTTACTACTATATCATGAGGTAAGTTCAATAACTTGATATGTATGTCCTCAATCCTGGGATGATTTTCTGACTCCATTTTAATCGATGTCTCTCAGCTGGAAGAACAACGTCAAGCTTGAGTTACCAGCTTAGCTTAAAAGGGTTAGCGTTAGAATTGTGTTAAGCTTTGGCAGAAAACGTAGCTTTTCTGTCAGTTTTGAATTAGTTGTAGTTTTGGGGACTTTATTTAAGTCGGGACTTTTTTTCAATCCTTTTGTAAGTTTACACTCTATAAACAAAGTCCTATTTGCACCTTCCTTTTATAAATATTAGATGCTTCTGTACTTAGCTCTCAAAATTGGCATTTTTTTTGCTCTCAAAATTGG TGGATAAATTAAATTGCATTTCAAATAGATGCCAGTGATTCTTCCGAAGATTTGAACCTTTTTTTCGTTGCTAATCAATTAGGGCTCTGGGAAATTGCGAGATTGATCCTACAAGTTCATTTTCCGGGCGATTCGAACGCCGTGAAAATCAGAATCTTTCGAGCGGGAAATTCAGAAGAGGAAGAAGATGAACGTGTTCAGATTGGCTGGGGATATGACCCATTTGGCCAGCATTCTGGTTTTGCTCCTCAAAATTCATACTATCAAGTCTTGTGCTGGCATTTCTTTGAAGACTCAAGAACTTTACGCCCTGGTTTTCGTTACCCGTTATTTGGATATATTTGACAGATTTGCATCAGTATATAATTTGATAATGAAATTAATATTTCTGGGGAGTTCTCTCTCCATTGTTTGGTATATGCGACGTCACAAAGTCGTGCGTAGATCGTACGACAAGGACCAGGACACGTTTCGTTATCAATTTATCGTGCTGCCTTGTCTGCTGTTGGCTCTGGTTGTTAATCATAAATTTACATTTAAAGAGGTTATGTGGACGTTTTCTCTATATGTCGAAGCCGTTGCCATTCTTCCTCAATTGGTGTTGCTACAAAGGACAAGGAATATCGACAATTTAACGGGACAATACGTCTTCCTTCTTGGCGCGTACCGTGCATTGTACATATTGAATTGGATCTATCGCTACTTAACCGAACCTTACTTTGTTCATTGGATAACATGGACGGCTGGTCTCGTGCAAACGTTGCTGTATGCTGATTTCTTTTACTACTATATCATGAGCTGGAAGAACAACGTCAAGCTTGAGTTACCAGCTTAGCTTAAAAGGGTTAGCGTTAGAATTGTGTTAAGCTTTGGCAGAAAACGTAGCTTTTCTGTCAGTTTTGAATTAGTTGTAGTTTTGGGGACTTTATTTAAGTCGGGACTTTTTTTCAATCCTTTTGTAAGTTTACACTCTATAAACAAAGTCCTATTTGCACCTTCCTTTTATAAATATTAGATGCTTCTGTACTTAGCTCTCAAAATTGGCATTTTTTTTGCTCTCAAAATTGG ATGAACGTGTTCAGATTGGCTGGGGATATGACCCATTTGGCCAGCATTCTGGTTTTGCTCCTCAAAATTCATACTATCAAGTCTTGTGCTGGCATTTCTTTGAAGACTCAAGAACTTTACGCCCTGGTTTTCGTTACCCGTTATTTGGATATATTTGACAGATTTGCATCAGTATATAATTTGATAATGAAATTAATATTTCTGGGGAGTTCTCTCTCCATTGTTTGGTATATGCGACGTCACAAAGTCGTGCGTAGATCGTACGACAAGGACCAGGACACGTTTCGTTATCAATTTATCGTGCTGCCTTGTCTGCTGTTGGCTCTGGTTGTTAATCATAAATTTACATTTAAAGAGGTTATGTGGACGTTTTCTCTATATGTCGAAGCCGTTGCCATTCTTCCTCAATTGGTGTTGCTACAAAGGACAAGGAATATCGACAATTTAACGGGACAATACGTCTTCCTTCTTGGCGCGTACCGTGCATTGTACATATTGAATTGGATCTATCGCTACTTAACCGAACCTTACTTTGTTCATTGGATAACATGGACGGCTGGTCTCGTGCAAACGTTGCTGTATGCTGATTTCTTTTACTACTATATCATGAGCTGGAAGAACAACGTCAAGCTTGAGTTACCAGCTTAG
BLAST of CmoCh17G001030 vs. Swiss-Prot
Match: ERD2_PETHY (ER lumen protein-retaining receptor OS=Petunia hybrida GN=ERD2 PE=2 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 1.1e-105 Identity = 185/215 (86.05%), Postives = 201/215 (93.49%), Query Frame = 1
BLAST of CmoCh17G001030 vs. Swiss-Prot
Match: ERD2B_ARATH (ER lumen protein-retaining receptor B OS=Arabidopsis thaliana GN=ERD2B PE=1 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 4.7e-98 Identity = 172/215 (80.00%), Postives = 193/215 (89.77%), Query Frame = 1
BLAST of CmoCh17G001030 vs. Swiss-Prot
Match: ERD2A_ARATH (ER lumen protein-retaining receptor A OS=Arabidopsis thaliana GN=ERD2A PE=2 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 2.7e-85 Identity = 151/215 (70.23%), Postives = 181/215 (84.19%), Query Frame = 1
BLAST of CmoCh17G001030 vs. Swiss-Prot
Match: ERD2_DROME (ER lumen protein-retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 8.2e-58 Identity = 111/215 (51.63%), Postives = 163/215 (75.81%), Query Frame = 1
BLAST of CmoCh17G001030 vs. Swiss-Prot
Match: ERD21_XENTR (ER lumen protein-retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.9e-55 Identity = 109/215 (50.70%), Postives = 153/215 (71.16%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TrEMBL
Match: A0A0A0LI81_CUCSA (ER lumen protein-retaining receptor OS=Cucumis sativus GN=Csa_2G139800 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 2.7e-108 Identity = 197/215 (91.63%), Postives = 206/215 (95.81%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TrEMBL
Match: A0A103YFS7_CYNCS (ER lumen protein-retaining receptor OS=Cynara cardunculus var. scolymus GN=Ccrd_013332 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 2.6e-103 Identity = 187/215 (86.98%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TrEMBL
Match: A0A0B2PSB7_GLYSO (ER lumen protein-retaining receptor OS=Glycine soja GN=glysoja_037369 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.2e-102 Identity = 187/215 (86.98%), Postives = 199/215 (92.56%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TrEMBL
Match: C6T4N9_SOYBN (ER lumen protein-retaining receptor OS=Glycine max GN=GLYMA_18G164800 PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.2e-102 Identity = 187/215 (86.98%), Postives = 199/215 (92.56%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TrEMBL
Match: I3SA95_MEDTR (ER lumen protein-retaining receptor OS=Medicago truncatula GN=MTR_7g056337 PE=2 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 4.9e-102 Identity = 183/215 (85.12%), Postives = 198/215 (92.09%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TAIR10
Match: AT3G25040.1 (AT3G25040.1 endoplasmic reticulum retention defective 2B) HSP 1 Score: 358.6 bits (919), Expect = 2.7e-99 Identity = 172/215 (80.00%), Postives = 193/215 (89.77%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TAIR10
Match: AT1G29330.1 (AT1G29330.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 316.2 bits (809), Expect = 1.5e-86 Identity = 151/215 (70.23%), Postives = 181/215 (84.19%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TAIR10
Match: AT3G25160.1 (AT3G25160.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 111.7 bits (278), Expect = 5.7e-25 Identity = 75/227 (33.04%), Postives = 126/227 (55.51%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TAIR10
Match: AT1G75760.1 (AT1G75760.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23 Identity = 72/215 (33.49%), Postives = 118/215 (54.88%), Query Frame = 1
BLAST of CmoCh17G001030 vs. TAIR10
Match: AT1G19970.1 (AT1G19970.1 ER lumen protein retaining receptor family protein) HSP 1 Score: 105.1 bits (261), Expect = 5.3e-23 Identity = 79/219 (36.07%), Postives = 119/219 (54.34%), Query Frame = 1
BLAST of CmoCh17G001030 vs. NCBI nr
Match: gi|449442387|ref|XP_004138963.1| (PREDICTED: ER lumen protein-retaining receptor-like [Cucumis sativus]) HSP 1 Score: 399.4 bits (1025), Expect = 3.9e-108 Identity = 197/215 (91.63%), Postives = 206/215 (95.81%), Query Frame = 1
BLAST of CmoCh17G001030 vs. NCBI nr
Match: gi|659114798|ref|XP_008457233.1| (PREDICTED: ER lumen protein-retaining receptor-like [Cucumis melo]) HSP 1 Score: 396.0 bits (1016), Expect = 4.3e-107 Identity = 195/215 (90.70%), Postives = 206/215 (95.81%), Query Frame = 1
BLAST of CmoCh17G001030 vs. NCBI nr
Match: gi|6685428|sp|Q9ZTN2.1|ERD2_PETHY (RecName: Full=ER lumen protein-retaining receptor; AltName: Full=HDEL receptor; AltName: Full=PGP169-12 [Petunia x hybrida]) HSP 1 Score: 384.0 bits (985), Expect = 1.7e-103 Identity = 185/215 (86.05%), Postives = 201/215 (93.49%), Query Frame = 1
BLAST of CmoCh17G001030 vs. NCBI nr
Match: gi|976924315|gb|KVI08300.1| (ER lumen protein retaining receptor [Cynara cardunculus var. scolymus]) HSP 1 Score: 382.9 bits (982), Expect = 3.7e-103 Identity = 187/215 (86.98%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of CmoCh17G001030 vs. NCBI nr
Match: gi|351722158|ref|NP_001237746.1| (uncharacterized protein LOC100527553 [Glycine max]) HSP 1 Score: 379.8 bits (974), Expect = 3.2e-102 Identity = 187/215 (86.98%), Postives = 199/215 (92.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |