CmoCh16G011990 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCAGTGCTCGTCGTGCTTGGAGGGAATCGGAGGTTTTTCGGAGTAGAAAGCTCCATTTCATCACTCCACAGTCTCCCTGTTTGTCGAAAGTAAACACTCTCAACGTTCATAATCTTCTTATGTTTCCAATTTCTAAGTTCCTTTCTGGATAATGAATCATGATCATGGCTACTGCTCAATCTTGGGTTCGATTGAATTTCTGATTCACTGTCTTCTTCCACTTCAAATTCGCATGTTCTTCCTGTGTTCTGGGTTTCTCTTCTTCACCGATACTTTTTGCTTTTGATTTTAGAATATAGTGAATGAATGTTTCTTATACCAACTTGTTTTCAGCTGGGTGTTGTCGGGATTATGCAATTAAACATCCTTTACAATGATTAGATGAAAAAAAGAGGGAAAAAATCCATTTGAGTTACTGTAGTTGTGTTCAATATGACTTTGATTGTTGCTATGCTTAACTAAAAGCCATTTGTTTCGTTCTAGTTTGATAACCATTTTGTTGGTTTTTTGTTTTTGAAATTTGATTAAGATTTCAGAGTCATGTTCAAAATATGATAGATGTGATATCCTCATCGGTTGGGGAGGAGAACGAAACACCCTTTATATGGGTGTGAAATCCTCTCCCTAGCTGAGAGGGAAAGCCCAACGAGGACAATATTTGCTAGCGGTAGGCCTGAGCCATTACAAACGGTATTAGAGCCAGACACGGGGCGATGTGCCATTGAGGAGGTTGTAGACATTAGGCGGTGTGCCAGCAAGGACGCTGGGCCCCAAAGGGGGTGGATTTGGTAGGGGTCCCACATTGATTGGAGAAATGAGCGAATGCCAGCGAAGACGCTGGGTCTTGAAGGGGGGTGGATTGTGACATCCTACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGGGCGTGGAAACGGTGGATTTGGTAGAGGTCCCACATCGATTGGAGAAAAGAACGAGTACCAGCGAAGACGCTGGGCCCTGAAAGGGGATGGATTATGACATCCCACATTGGTTGGGGAGGAGAATGAAACACCCTTTATAAGGGCGTGGAAACCTCTCCCTAGTAGAAGCGTTTTAAAAACCTTGAAGGTAAGCCCGAAAGGAAAAACCCAAAGAGGATAATATCTGTTAGCGGTGTGGTACATGTTACAATTACTAGAAAAGATTACATAGTACATGTTATTTTAGAAGCATTCTTTTCGTCGAACTAGAAACAAAATTGTTATCAAACTGAGTCTTAGCGGTGTAATTTATCATTTGAAGTCCCATCAACCTTTGTTTCCAGCATAGACCAGCACAATGGAAGACAGTAAAAACCATTCTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAGTAAGGTTGAGATTTCTCCATAATCATGTTCGAACAACTCCACGATATAATGTCTCGAAAGTTGACGTCGTTATTACATTTTTATGCAGATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCGATTATGATTTTGACCAAGATGGGTTCGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGTATCAGGAAATCGTCGTGTTTATATTTTCATCGACTTTTTTCAGCATCGGGATGTTTTCTATACTAGAAAGATAATGATGTCTAGGCTTTGCTCCTTTTTTCTTTCATGTCTCTTAAACTATTCATATAACTTATTGTCTGTTTCTTACTGTTTGGAGCTCTTACTTTTTGATGTAGTTTCAATGTTATTCTTGATGGGTGCTGTAAAAGTCTTTTAGATGTTCTTATTACACATACATTATGGGGGAAAATTCAATATTTACCACTGTACTTTGACTCATTGAATCAGTTTAAACTTCAGCTTTCAATTTGTTAAATCCTAAAGTTGAATATGTGGTGTGTTAGACAAACACGACTCTCCACAATGGTATAATATTGTCCACTTTGAGCTTAAGCTCTCATGGCTTTGCATTGGACTTCCCCAAAAGGCTTCAAACCAATAGAGAGTGTATTCTTTAATTATAAACCCATGACCGTTCCCTAAATTAACCGATGTGGGACACTTTCATCCAACATGGTGAAATCAATGCCTTCAATTAGTTAAGCTTCTATCTTCTTGAAAATTTGTGGTTAGTAAGGAGTATTATGAGATCTCACATCGGTTGGAGAGAAGAACGAAATATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCATTCTAAAAACCTTGAGGGGGAGCCCGAAAGGAAAAGCCCAAAGAGGATAATATCTGCTAACGGTGGGTTTGGGCTGTTACAAAAGGTATTGGAGTTAGACACCGGATGATGTGCTAGTGATGACACTGAGCCCCAAAGGGGTAGACACCGGGCGGTTTGTCAGCGAAGACGTTGGGCCCTGAAGGGGGTGGATTTGTGAGATCCCACATCGATTAGAGAGTGGAACGAGTGTTAGCGAGGATGCTGGGTATCAAAGGGGAGTGAATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCTTTTTAAGGGTGTGAAAACCTCTCCTTAACAAGCACGTTTTTAAAACCTTGAGGGGAAACCCGAAAGGGAAAGTCCAAAGAGAATAATATCTGCTTGCGGTGGACTTAGGCTGTTACAGTATTCTTGTGGTTGGACAAAAGTATTTTTGTGAGTATTGATTTTTCTGGTTATATCTGATGTTTCTTAACTGGGTAAGAGCACGTGGTTTGATTTAAAAGAAGTACGAGATTTAATACGCTACTATATCATACGCTTTGCATTTTAACTGGATGTTTATGGATGTGGAAAAGGTAGATAGCTACCGTGGAAGGGATCTTTAACTTTTGGTTTTTCCTTTTGGAGATGTTTATCATCTTTTTATTATCCCAAAGAACACATTTTAAAAACTGTTTGCTTCTCCAGGGCCTGCAGAATATCTTTGATGAGCAGAAGATGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGGTATTCTACTCATCATGATGTAGCTTCGAACCGTTTGATGCTCTCTTTTGATGATTTTGATGTGTGCTATACCCTTATATACTCAGAACAATTCAAGTATTTCATTTCCATTTATAAAGGAGATAGACAATATCATGACCGCTGTTTATGTAACAACCCAAGGTTTTTAAAACGCGTATGCTAGCGAGATGTTTCCATACCCTTATAAAGAATGCTTTGTTCCCTTCTCCAATTGACGTGGGATCTCACAATCCACCCCCTTTCGAGGCCCAGCGTCTTCGCTGGCACTCGTTCCTCTCTCTAATCGATGTGGGATCTCAAAATCCACCCACTTTCGGGGCCCAGCTTCTTCGTTGGCACATCGTCCGATGTCCACCCCCTTCGGGGGCTCAGTGTCCTCGCTGGCACGCCGTCTGGTGTTTTGACTCTAATACCATTTGTAACAGCCCAAGCCCACCGTTAACAGATATTATTCTTCTTGGGCTTTTCCTTTCGAGCTTCCCCTCAAGATTTTTAAAACGTGTATGTTAGGGAGAGGTTTCCACACCCTTATAAAAAATGCTTCGTTTCCTTCTCCAACCGATGTGGGATCTCACAATCCACTCCCTTTCGGGGCTCAGCGTTCTCGCTGGCACTCGTTCCTCTCTCCAATCGATGTGGGATCTCACAATCTACCCACCTTCGAGGCTCAGCTTTCTCGTTGGTACACCGATGTCCACCCCTTTCGGGGCTCAGCATCCTCGCTAGCACACTACCTAGTGTTTGGCTCTGATACTATTTGTAACAGCCAAAGCCCACCACTAGCTAATATTGTCCTCTTTGGGCTTTCACTTTCGGGCTTCTCTTCAAAGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAACAATGTTTCGTTCCCCTCTCTAACCGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACTGATTGAGATCTCACTTGAGGAAATCTCGCATAGTAGTTGACACATTGGTGTACTAAACTATATATGATATTTGGACAATACTTTTAATACCACCACCTACCGTTCTCTATTGTACTTAATCCTCTAGCTAAAGTTTTTGTTGCTTCTCTATACACCTGCAAATGGTCACTCTTATTTTCCACCATTCAAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGGCACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGGTGAGTCACTCCCTTTTTAATTATCGACTTATTTAAAAACTTGTCTTAATTATCGACTTCGAATCGATTACTTTCCAGTTTACAGTTCATGGGAAGTGGGGAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTAATAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAGCTCACATAATCGGTAACAGATAAGCTAATCATTTTCCATGCTTCATCTCTGTGTTCTTATGAAATACAAGAGATAAGTATTATGGCTGTCTTTTATGTTCAAAGATGATATGCATAATCACAATCATTAGCCGGCCATAATAAGTCTGTATTTTTCTTCCATATTGTAATGTACTTCTGCTTGTATTGATCAATATTCAGTGGCTGTAATCTTTGTTCTGAGAATGCAAAACTTGGTTATCTTAAGCTGTTGTTTGCATTTGGGATG GTCCAGTGCTCGTCGTGCTTGGAGGGAATCGGAGGTTTTTCGGAGTAGAAAGCTCCATTTCATCACTCCACAGTCTCCCTGTTTGTCGAAACATAGACCAGCACAATGGAAGACAGTAAAAACCATTCTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCGATTATGATTTTGACCAAGATGGGTTCGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGGCCTGCAGAATATCTTTGATGAGCAGAAGATGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGGCACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGTTTACAGTTCATGGGAAGTGGGGAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTAATAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAGCTCACATAATCGGTAACAGATAAGCTAATCATTTTCCATGCTTCATCTCTGTGTTCTTATGAAATACAAGAGATAAGTATTATGGCTGTCTTTTATGTTCAAAGATGATATGCATAATCACAATCATTAGCCGGCCATAATAAGTCTGTATTTTTCTTCCATATTGTAATGTACTTCTGCTTGTATTGATCAATATTCAGTGGCTGTAATCTTTGTTCTGAGAATGCAAAACTTGGTTATCTTAAGCTGTTGTTTGCATTTGGGATG ATGGAAGACAGTAAAAACCATTCTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCGATTATGATTTTGACCAAGATGGGTTCGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGGCCTGCAGAATATCTTTGATGAGCAGAAGATGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGGCACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGTTTACAGTTCATGGGAAGTGGGGAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTAATAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAG
BLAST of CmoCh16G011990 vs. Swiss-Prot
Match: EYA4_MOUSE (Eyes absent homolog 4 OS=Mus musculus GN=Eya4 PE=2 SV=2) HSP 1 Score: 144.4 bits (363), Expect = 2.1e-33 Identity = 97/272 (35.66%), Postives = 133/272 (48.90%), Query Frame = 1
BLAST of CmoCh16G011990 vs. Swiss-Prot
Match: EYA4_HUMAN (Eyes absent homolog 4 OS=Homo sapiens GN=EYA4 PE=1 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 3.5e-33 Identity = 96/272 (35.29%), Postives = 135/272 (49.63%), Query Frame = 1
BLAST of CmoCh16G011990 vs. Swiss-Prot
Match: EYA2_BOVIN (Eyes absent homolog 2 OS=Bos taurus GN=EYA2 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 4.6e-33 Identity = 93/272 (34.19%), Postives = 135/272 (49.63%), Query Frame = 1
BLAST of CmoCh16G011990 vs. Swiss-Prot
Match: EYA2_HUMAN (Eyes absent homolog 2 OS=Homo sapiens GN=EYA2 PE=1 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 1.8e-32 Identity = 98/303 (32.34%), Postives = 146/303 (48.18%), Query Frame = 1
BLAST of CmoCh16G011990 vs. Swiss-Prot
Match: EYA2_MOUSE (Eyes absent homolog 2 OS=Mus musculus GN=Eya2 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-32 Identity = 91/272 (33.46%), Postives = 135/272 (49.63%), Query Frame = 1
BLAST of CmoCh16G011990 vs. TrEMBL
Match: A0A0A0L1X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011790 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 4.6e-157 Identity = 269/311 (86.50%), Postives = 291/311 (93.57%), Query Frame = 1
BLAST of CmoCh16G011990 vs. TrEMBL
Match: W9RN72_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023285 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 6.8e-124 Identity = 206/311 (66.24%), Postives = 258/311 (82.96%), Query Frame = 1
BLAST of CmoCh16G011990 vs. TrEMBL
Match: F6HTB0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01000 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-123 Identity = 210/307 (68.40%), Postives = 253/307 (82.41%), Query Frame = 1
BLAST of CmoCh16G011990 vs. TrEMBL
Match: A0A061G4B8_THECC (Eyes absent OS=Theobroma cacao GN=TCM_015742 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 5.4e-121 Identity = 211/323 (65.33%), Postives = 252/323 (78.02%), Query Frame = 1
BLAST of CmoCh16G011990 vs. TrEMBL
Match: M5WMU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009279mg PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 2.7e-120 Identity = 204/298 (68.46%), Postives = 249/298 (83.56%), Query Frame = 1
BLAST of CmoCh16G011990 vs. TAIR10
Match: AT2G35320.1 (AT2G35320.1 EYES ABSENT homolog) HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-110 Identity = 188/297 (63.30%), Postives = 234/297 (78.79%), Query Frame = 1
BLAST of CmoCh16G011990 vs. NCBI nr
Match: gi|659095671|ref|XP_008448705.1| (PREDICTED: eyes absent homolog 2 [Cucumis melo]) HSP 1 Score: 573.9 bits (1478), Expect = 1.7e-160 Identity = 275/320 (85.94%), Postives = 299/320 (93.44%), Query Frame = 1
BLAST of CmoCh16G011990 vs. NCBI nr
Match: gi|449462007|ref|XP_004148733.1| (PREDICTED: eyes absent homolog 4 [Cucumis sativus]) HSP 1 Score: 562.0 bits (1447), Expect = 6.7e-157 Identity = 269/311 (86.50%), Postives = 291/311 (93.57%), Query Frame = 1
BLAST of CmoCh16G011990 vs. NCBI nr
Match: gi|703129316|ref|XP_010104334.1| (hypothetical protein L484_023285 [Morus notabilis]) HSP 1 Score: 451.8 bits (1161), Expect = 9.7e-124 Identity = 206/311 (66.24%), Postives = 258/311 (82.96%), Query Frame = 1
BLAST of CmoCh16G011990 vs. NCBI nr
Match: gi|225427254|ref|XP_002278688.1| (PREDICTED: eyes absent homolog 2 isoform X1 [Vitis vinifera]) HSP 1 Score: 451.1 bits (1159), Expect = 1.7e-123 Identity = 210/307 (68.40%), Postives = 253/307 (82.41%), Query Frame = 1
BLAST of CmoCh16G011990 vs. NCBI nr
Match: gi|720044745|ref|XP_010269985.1| (PREDICTED: eyes absent homolog 2 [Nelumbo nucifera]) HSP 1 Score: 449.5 bits (1155), Expect = 4.8e-123 Identity = 210/300 (70.00%), Postives = 249/300 (83.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |