CmoCh16G010860 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAGCTCAGAAAAAAGGGAAAACCCAAATTAATTTATTAAAAAAAAATGAAAAATATCACTCCTTCTCCGTCTCCGCCTCTCCACCATTACCAATCTTCTCCGTTCTTCTCTGTAAATCTCTTTCTCAATTCGTTTCATAATCTCTTTGAATCGTTGAAAAAATGAATCCAAATTAAGTAATAATCTCTGTGATTGTTGTTTCTTTCTTTGTTTTACAGATCGTTCCAAACAGTGAGAGAACAGAGGAGGAAGATGAGTTCAACAGAGCAACCCCAGGTAGTTGTACGGACGCCGGAGCAAAGCACCACCCGACGCCGCTCCACCTGCATTCTCACGGCGGAGATGAGATTCTTCCCAAACGTTCCACCAAGAAACGCCTGGAGCCAGTGGCTTCCGTCGGCGGCGGTGGATCGGTGTCCTGCAGCAAGTGCAGGCCACATGCTCGAGAAAAGTTCTCTGTGGTTCCGGTGGATTACAATGGCGTTGCTAAGCAGTTTTTCTCAATGGCGAGTCCTAATGGAATATTGAAATCTATTGTGTCGTCGTTGACAGGAAAAAGCCCTAAATCGATGAAGGAAGGAGCGGATTGGGCGGTGAGAGAAGAGCAGTGGAAAATCGCTTTCGGGGAAGTTTCGCATAAACTGATTGAAGCGACGAGGAAAAGAGATGAAGCGATTCTTGAAGCTTCGAGGCTGAAATATTCCATGGCGGAATTGGAGAAGAAACTCAATAAACTCGAAATCTATTGCCATAGTTTGAAGTCCGAGCTCTATAAATGCGTTTCAAATCCGCGAAACCCTAACCTAGAAGTTCCAACGAACAGCGATTCGATTTCAGACAAAATAATCGAGAATTTCTTATTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAACATTTGCCTTATTACTATAGGTATCTCTCCATTTATTGTTATTTCCATTTATTACTATTTTCATATCCTTGTAATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTCAGCAAACATTCACATGGTATCAGAGCCATTTTGGTTTAGCAACCTAGATCCTTTCTTTTCAATGGCTTTTGAAATCTTCTACTGTTCTTCTCCACCACCATTGTTGTTTTTGATGCCGCAGGGGCAGTCGTCATGGCTGTCACATGCAGAGTCGATTGATTATTCTTCGGCTCCACCTTTTTGACCTCCAAATCATCCTTCGCCATACTCTGTACATACAACCTCACCTTTTCCAAACATAGCCTCTTTCATTTTCTTCCCAATTTTTCCTTCATCCTTCACAAAAACCCTAATCTTAGGATCTTCATCAGCATTCCTCTTCGAAAATATACAGAATCTCAATAAGCCCATCGACCTTCTGCAGAGATTTACCTTTGGAATCTGGGCGCCGCACTGGCATCTTCGCCAACCAAGTTGCCACTGCCCTTCTCGCCAAAATTGGCTCCTTCGCCCCAATGTGGCGACTCTTCCAACTGCCCTTCTCGCCAAAATTGGCTCCTTCGCCCCAATGTGGCGACTCTTCCAGCTGCCCTTCTCGCCAAAATTGGCTCATTCGCCCAATGTGGCGACTCTTCCGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTCCCCTTCTACTTCTTGGGGTTAGACATATTCTCACCAGAGCCAAGTCAGCATCGTCGCTAAGCGACAATCCCTCTTCATGGGTTAGACATATTCTCACCGAAGCCAAGGCAGCATTGCTGCTGAGCGGCGATCTCTCTGCAGTTTTCGATGGCCAAGAAAGTGTTTCTCTACGCCTCCTCTGAACCAGGTTGTTAACATCTTCACGAAAAGTGTTTTTCAACCCCTTTGAATTTTTCAGATTCAAGCTTCACGTTCGTTTAAATCCGACGCTTAGCTTGCGGTGGGGTGTTAAGGATATTTAGTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTATTATAAGGCAAATATCTAACATTTGCCTTATTACTATAGGTATCTCTCCATTTATTGTTATTTCCATTTATTACTATTTTCATATCCTTGTAATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTTTCATATCCTTGTAATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTCAGCAAACATTCACATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTCAGCAAACATTCACACTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTCAGCAAACATTCACACTTATCATCCGTTTCCGAATCGCGATCGTCCGTGAGGCAGTTAAGCCGATCACTAGCGATGCAACTCCATCACATCGGAGGCAAAATCTACGAGAGGATTCAATTCCTCCTCCGATCTCACGAAATTAAAATCTCTCTCTCGAAAAACAGTAAAACCTCACTAATCTTCCATCTCGAAGCGATTCTAAACAGAGCATTCTTCGAGGATTTCGAATCGATAGGGTTTCAGAAGAACTCACCGAATCAGATCCTGAATCCTTCGGATCGGACGGAATCGAACATCGCGTCGTTCAATCGCCTCCACCGGCTGAGTTGGGAGGAAGTTTTAGGAAAAGGAACGAGGCATTTCAGCGAGGATTTCAGCAGATTCTGCGACCGGAAGATGAGCGACATTATTGCGATGCTTGAGTGGAACAGAGCATGGCCGGAGCCGCTACTGCAGGCGTTCTTCATGGCAGCGAAGAGCGTTTGGCTTGTTCATCTTCTCGCCAACGCCGTTCATCCGAGCTTGCCGATATTCAGAGTGGATTCGGGCGTGAGATTCGACGGCGTTTACATGGAGGACATTGCAGGTGAGAAAGCCAGAGAACTGGCTCCGGCGACGGTGAGAATAATGGTGGCGCCGGGATTTTATGCGTTTGATGGGTTGATCAAGTGTAAGGTTATGTGTAGGTACCACACTAATCTTAATAATTAA CCAAAGCTCAGAAAAAAGGGAAAACCCAAATTAATTTATTAAAAAAAAATGAAAAATATCACTCCTTCTCCGTCTCCGCCTCTCCACCATTACCAATCTTCTCCGTTCTTCTCTATCGTTCCAAACAGTGAGAGAACAGAGGAGGAAGATGAGTTCAACAGAGCAACCCCAGGTAGTTGTACGGACGCCGGAGCAAAGCACCACCCGACGCCGCTCCACCTGCATTCTCACGGCGGAGATGAGATTCTTCCCAAACGTTCCACCAAGAAACGCCTGGAGCCAGTGGCTTCCGTCGGCGGCGGTGGATCGGTGTCCTGCAGCAAGTGCAGGCCACATGCTCGAGAAAAGTTCTCTGTGGTTCCGGTGGATTACAATGGCGTTGCTAAGCAGTTTTTCTCAATGGCGAGTCCTAATGGAATATTGAAATCTATTGTGTCGTCGTTGACAGGAAAAAGCCCTAAATCGATGAAGGAAGGAGCGGATTGGGCGGTGAGAGAAGAGCAGTGGAAAATCGCTTTCGGGGAAGTTTCGCATAAACTGATTGAAGCGACGAGGAAAAGAGATGAAGCGATTCTTGAAGCTTCGAGGCTGAAATATTCCATGGCGGAATTGGAGAAGAAACTCAATAAACTCGAAATCTATTGCCATAGTTTGAATAAAACCTCACTAATCTTCCATCTCGAAGCGATTCTAAACAGAGCATTCTTCGAGGATTTCGAATCGATAGGGTTTCAGAAGAACTCACCGAATCAGATCCTGAATCCTTCGGATCGGACGGAATCGAACATCGCGTCGTTCAATCGCCTCCACCGGCTGAGTTGGGAGGAAGTTTTAGGAAAAGGAACGAGGCATTTCAGCGAGGATTTCAGCAGATTCTGCGACCGGAAGATGAGCGACATTATTGCGATGCTTGAGTGGAACAGAGCATGGCCGGAGCCGCTACTGCAGGCGTTCTTCATGGCAGCGAAGAGCGTTTGGCTTGTTCATCTTCTCGCCAACGCCGTTCATCCGAGCTTGCCGATATTCAGAGTGGATTCGGGCGTGAGATTCGACGGCGTTTACATGGAGGACATTGCAGGTGAGAAAGCCAGAGAACTGGCTCCGGCGACGGTGAGAATAATGGTGGCGCCGGGATTTTATGCGTTTGATGGGTTGATCAAGTGTAAGGTTATGTGTAGGTACCACACTAATCTTAATAATTAA ATGAAAAATATCACTCCTTCTCCGTCTCCGCCTCTCCACCATTACCAATCTTCTCCGTTCTTCTCTATCGTTCCAAACAGTGAGAGAACAGAGGAGGAAGATGAGTTCAACAGAGCAACCCCAGGTAGTTGTACGGACGCCGGAGCAAAGCACCACCCGACGCCGCTCCACCTGCATTCTCACGGCGGAGATGAGATTCTTCCCAAACGTTCCACCAAGAAACGCCTGGAGCCAGTGGCTTCCGTCGGCGGCGGTGGATCGGTGTCCTGCAGCAAGTGCAGGCCACATGCTCGAGAAAAGTTCTCTGTGGTTCCGGTGGATTACAATGGCGTTGCTAAGCAGTTTTTCTCAATGGCGAGTCCTAATGGAATATTGAAATCTATTGTGTCGTCGTTGACAGGAAAAAGCCCTAAATCGATGAAGGAAGGAGCGGATTGGGCGGTGAGAGAAGAGCAGTGGAAAATCGCTTTCGGGGAAGTTTCGCATAAACTGATTGAAGCGACGAGGAAAAGAGATGAAGCGATTCTTGAAGCTTCGAGGCTGAAATATTCCATGGCGGAATTGGAGAAGAAACTCAATAAACTCGAAATCTATTGCCATAGTTTGAATAAAACCTCACTAATCTTCCATCTCGAAGCGATTCTAAACAGAGCATTCTTCGAGGATTTCGAATCGATAGGGTTTCAGAAGAACTCACCGAATCAGATCCTGAATCCTTCGGATCGGACGGAATCGAACATCGCGTCGTTCAATCGCCTCCACCGGCTGAGTTGGGAGGAAGTTTTAGGAAAAGGAACGAGGCATTTCAGCGAGGATTTCAGCAGATTCTGCGACCGGAAGATGAGCGACATTATTGCGATGCTTGAGTGGAACAGAGCATGGCCGGAGCCGCTACTGCAGGCGTTCTTCATGGCAGCGAAGAGCGTTTGGCTTGTTCATCTTCTCGCCAACGCCGTTCATCCGAGCTTGCCGATATTCAGAGTGGATTCGGGCGTGAGATTCGACGGCGTTTACATGGAGGACATTGCAGGTGAGAAAGCCAGAGAACTGGCTCCGGCGACGGTGAGAATAATGGTGGCGCCGGGATTTTATGCGTTTGATGGGTTGATCAAGTGTAAGGTTATGTGTAGGTACCACACTAATCTTAATAATTAA
BLAST of CmoCh16G010860 vs. Swiss-Prot
Match: IRKI_ARATH (IRK-interacting protein OS=Arabidopsis thaliana GN=IRKI PE=1 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-47 Identity = 89/187 (47.59%), Postives = 129/187 (68.98%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TrEMBL
Match: A0A0A0L1R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036460 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.4e-94 Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TrEMBL
Match: A0A078G6J0_BRANA (BnaA08g24790D protein OS=Brassica napus GN=BnaA08g24790D PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 1.2e-87 Identity = 201/431 (46.64%), Postives = 260/431 (60.32%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TrEMBL
Match: A0A078EA74_BRANA (BnaA06g08220D protein OS=Brassica napus GN=BnaA06g08220D PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.2e-79 Identity = 179/380 (47.11%), Postives = 237/380 (62.37%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TrEMBL
Match: A0A067FJZ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011754mg PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 2.4e-75 Identity = 135/184 (73.37%), Postives = 156/184 (84.78%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TrEMBL
Match: V4TJW0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019946mg PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 2.4e-75 Identity = 135/184 (73.37%), Postives = 156/184 (84.78%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TAIR10
Match: AT1G12330.1 (AT1G12330.1 unknown protein) HSP 1 Score: 246.9 bits (629), Expect = 2.0e-65 Identity = 120/198 (60.61%), Postives = 149/198 (75.25%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TAIR10
Match: AT5G12900.1 (AT5G12900.1 unknown protein) HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48 Identity = 89/187 (47.59%), Postives = 129/187 (68.98%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TAIR10
Match: AT3G60680.1 (AT3G60680.1 Plant protein of unknown function (DUF641)) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-10 Identity = 54/179 (30.17%), Postives = 81/179 (45.25%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TAIR10
Match: AT5G58960.1 (AT5G58960.1 Plant protein of unknown function (DUF641)) HSP 1 Score: 55.8 bits (133), Expect = 6.6e-08 Identity = 52/173 (30.06%), Postives = 71/173 (41.04%), Query Frame = 1
BLAST of CmoCh16G010860 vs. TAIR10
Match: AT2G45260.1 (AT2G45260.1 Plant protein of unknown function (DUF641)) HSP 1 Score: 55.5 bits (132), Expect = 8.6e-08 Identity = 49/206 (23.79%), Postives = 83/206 (40.29%), Query Frame = 1
BLAST of CmoCh16G010860 vs. NCBI nr
Match: gi|659096073|ref|XP_008448912.1| (PREDICTED: leucine zipper protein 1-like [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 1.0e-95 Identity = 171/181 (94.48%), Postives = 175/181 (96.69%), Query Frame = 1
BLAST of CmoCh16G010860 vs. NCBI nr
Match: gi|449460433|ref|XP_004147950.1| (PREDICTED: uncharacterized protein LOC101204074 [Cucumis sativus]) HSP 1 Score: 354.8 bits (909), Expect = 2.0e-94 Identity = 168/181 (92.82%), Postives = 175/181 (96.69%), Query Frame = 1
BLAST of CmoCh16G010860 vs. NCBI nr
Match: gi|674912142|emb|CDY21046.1| (BnaA08g24790D [Brassica napus]) HSP 1 Score: 331.6 bits (849), Expect = 1.8e-87 Identity = 201/431 (46.64%), Postives = 260/431 (60.32%), Query Frame = 1
BLAST of CmoCh16G010860 vs. NCBI nr
Match: gi|674935420|emb|CDX98071.1| (BnaA06g08220D [Brassica napus]) HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79 Identity = 179/380 (47.11%), Postives = 237/380 (62.37%), Query Frame = 1
BLAST of CmoCh16G010860 vs. NCBI nr
Match: gi|502138195|ref|XP_004503320.1| (PREDICTED: uncharacterized protein LOC101511046 [Cicer arietinum]) HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75 Identity = 142/234 (60.68%), Postives = 175/234 (74.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |