CmoCh16G010840 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCCTTTCCACTCCCTCTCCGCCGCCCAGCTTGCGCTTGGCCGCAATCTCACCTTCTTCGAGACCCTCTGGTTCAACTACTCCCACGACAAGTCCGATTACTTCCTCTTTTGCCATAACATTCTCTTCCTGTTCTTGATTTTCTCCTTTATTCCCCTTCCCCTTATCTTTCTCGAGATCTTGCACGCCTCCGGGATTCACAAGTACAAAATTCAGCCCAAAGTCCGGTTGCCATTTTCCGAGATCTTCCGCTGCTACAAGGATGTTATGCGCATGTTCTTCCTTGTTGTTGGTCCTCTTCAGCTCGTCTCATTCCCTTCCATTCAGGTGAATCTCGGGTTTCGATTTCGCGATTTCTACCCTCTTGTTGATTTAGGATTTTGATTTTGAGATTGTTTTTCGGTTTCTCTTGGATCATTAGATGATTGGAATCAGGACGGGTTTGCCATTGCCTTCTGGTTGGGAAATTGTTTCTCAATTGGTGGTGTATTTCATGGTGGAGGATTATACCAATTATTGGATTCATAGATTCCTCCATTGCAAATGGGGGTATGAGAATATCCATCAAGTTCATCATGAATACACTGCTCCTATTGGATTTGCAGCTCCTTACGCTCATTGGGCGGAGGTTTTGATCCTTGGAATCCCCTCTTTTCTTGGTCCTGCTATGGTTCCTGGTCATATGATCACCTTCTGGTTGTGGATTGCGCTAAGGCAGATTGAGGCCATTGACACGCATAGTGGGTATGAATTCTAAAGCTATATCTCTCTCACACTGTGTTAAAAGTACTTTTAATCTGAAGGATCTTGAATGGTGGGCTTACCTCTTTTTTGACTACGACCGAGATCTGCTCTATTGCTTTCTTCTCTTTTAATCTTGATTTCCTTTTCCTCATTATATATATATATATATATATATATTTTATCTATATGGAGTTCCATCATTACTGTATGAATTTATTGCATGCTGAATGATTGATCCTACTAACTTGATATAACGAAGTTTGAAGTTTTGTGTTGAGAAATATTGAAAGGGTTAAATTTACCCTTCTTTGAGTTGTCTAGCATCAACTTTTTCAGCTTCCACATTCTTCATACAGCTGTGTGAAAGCTCGATATTCCTTTGAATTTATCGTAAGGGGGTGTATATATCTTCTATGAGAAGCTTAGCTATGAAGCTTGATTCTTGTATACTAAACTTATTATAGGGCCCACTACCCCTTTATGCTTTAAGCTTATGGATATCATTTCAAGATCCATGATTTAACATGCTATGAAGTAGCTAGTATTGAGTATTGTTATTTTTTTCTTCTCAATTTTGTATTAGGCTTTGTGTGCTAACATTTGACTTTACTTTCTCTGATTAGTGGGACCGTAGGTGTATTAGACTATAGTTTTTAGTGAAGAATGAGATTCGTGTATGAGGAAAGGAAAAACAACGACGTGGTTGTGTCAATGTGTGATGATATCGGTGGGCAAAGATCATGAACATGATTATAACCGAACCTTCTTGGTTCAAACATTCTTCACTTCAGGGGAGCCTTTAGCTCACGATCATTCCCGATCTTCTGTATCTTACTCCATTGTAGTTGTTTTTGGGGCTTCACCTTTTCGATCTCATTGTTAAGATTTCATAACCTTGGGATTGTTGGGAAATGAAAGGAAGTTCGGAGCTGTTGTGTAGAAAGAAATCTTTAGAGAATTGCTTCTAGCCCGATGGAGTAGACATATAGGGTGCTCACGGGTTAGACTCGTGTAACTTGGGTTAAGAAGCCTAACATATTCTAGCATACGGTTTGCTTATTTTGATCTACGAGTTTGTTAATTCCCTGGGTTACATAAACCCACTAGTTATACGAATCCAAGTTTCCATAACTGTGAGATCCCACCTCGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTTTCCCCAGCAGACAGTGTTTTGAAAACTTTGAAGGGAAACCCGACGGGAAAGCCCATCTGCTAGCGGTGGGCTTGGGCTGTTACAATAATCTACCACTCAGTACGTTCTGAACACAAATAAATTATATAAACTCAGCTTTTCAATAAACCAACCTTATTCAATTGTATTGTTCCTCTTCCTCCTCAGAAGAATCGAGAAGCTCTGTTATTCATGTTGGCTCAATCGTTTTAGAGGAGTGTAGAGGTAACAAAAGTAAATTGACATCTCAAAGGGCCAGCTTACTCAAATAAGAATCCATTGATTTGACCTCCAAATTGTTTAGTTGGTCAGAAACGAAAAATAATTGATGTCAGGCTTATGGCTGGGAACAAATGCGGTGTCAGACAATCATTTCTTTGGTCATGTAGGACATAGCTTCACTCTTGGTGGGTTTCCTGTGGCTGAACATCCCTTTAGCCCTTGGCTGAACTCGAATAACTTTATGTGTTATTATTTTATATCCCTGAAGTTTAATTGTTTTGTCTCTTTCACAGAAATATTGAGATTCGTATGCACATTGATGGAAAGTTGTTGTATAACTTTTGGTGCTAACGAGAAAGTCGAAAAAATTTTAAAAATGAAGAAACTCACATCAATAATCTGAAGTTGAACTATTGACTTCTTTGGACTTTCCCTTTGTATTATGTTTTCTATCGATGTGAATGAGAGGAATGATGGTTTAATGGGTAAGCCTTACTGCATATCTCCAAAATCTACTGTTTTCTCTCTTTACCATGTCGACTTAAACTTACTACTTGTGAGATCCCACCTCGATTGGAGAGGAAAATGAAACATTTTTTACAAGGGTGTGGAAACCTTTTCCAGTAGACGCATTCTAAAACCATGAGGGGATATCCATAAGGGAAATCCAAAAAGGACAATATCTGCTAGCGGTGGGCTTGAGTTGTTACACTACTAGAGATGTTATGGGAGGTATACCAAACTAGAGGGACTATAATAAACTTTTAAAACTATAGAGATCAAGTTGAAGTCAAGTGCAAACCATAGAGACTAAAATCGTAATACAATCATACTTTGAGATCTCACATCGATTGGAGAGAACAAGTGCATTCTTTATAAGGGTGTGAAAACTTCTCTCTAGCAGACGCGTTTTAAAAACCTTGAGGGAGGGAAAATCCCAAAGAAGATAATATCTACTCGCGGTCGCTGGGCGTCAAAGGGGATGGATTGTAAGATTCCACATCGATTGGAGAGAAGAATGATTGCATTCTTTATAAGGGTGTGAAAATCTTTCTTAGAAGACATGGTTGGAAAGCCTAAAGAGGACAAAATACATCATTTATCTTCCTTTTAGTGTGTTCTTTTTCTTTTCCTCCTCTGCTTTTCTCTGAGATTGTGCTTTTATGATGGCCTGTTGAGATCATCCCTGGTTTTATTCATACATATTATATTCATATTCAGGTATGATTTCCCCTGGAGTCTAACGAAATTCATACCATTTTACGGTGGTTCGGACCATCATGATTACCATCACTATGTTGGAGGACAAAGCCATAGCAACTTTGCTTCAGTATTTACCTACTGTGATTATATTTACGGAACTGACAAGGTAGTTATGCTGCTCCTCTTATAATTTTACCTCCCACTTGTTCTTCCAGTTAAACCATGCTCATAAAAGTTACTCGTTTGTTTACTTCCTCAGGGGTATCGCTATCAAAAGAAGATCCTTAAGAAGGTAAGCATTTTGTTTTCGCCTCCGCCCCCACCTTCACCCCGAAAATTGATTGTATATGATGTCGTGAGCTTGCATTGATTTCATGTTTTCTCCAACTGGACATTAGATATACTCATCTATGAGCTTGCTTCGATTGCGTGGCCTTGGGATTGCTAGTTTAACTATATTTGGTTGGATCAAATGTGAGATCCCACATTGGTTGGAGAGGGGAACGGAGCATTCCTTATTGGGTGTGGAAACCTCTCCCTAACAGACGTGTTTTAAAACCGTGATGCTGACAGCGATACGTAGCAGGCTAAAATGGACAATATTTGTTAGCGGTGGGTTTGGGTTGTTACAAATGGTATTAAAGCCAGACACCGGGCGGTGTCCCAGTGATGTCGCTGGGTCCCTAAGGGGGTAGATTGTGAGATCTCACGTCGGTTGGAGAGGGGAACAAAGCATTCCTCATAGGATGTGGAAACCTCTCCCTAACAGACACATTTGATAACCATGAGACTAACGGGATACGCAAGTGGCTAAAACGGACAATATCTACTAACGGTGGGCAGCTTGGGCTGTTACATCAAATCTATTTCCTTTGTTCTTTTTAACCGGCTACCCCGTACCTGTTAAATCATTGTGTGTTCTAATTGTTTGTTGGTGGTGGAATCAGTTGAAGGAAGAAGTGAAAAGCAGTGAAGGATCATACTACAGCACAGCCGAAGATGTTAAAGTGGACTAGACGATGAATCGGGGAACGAGGGATATTCATGTTTTGAAGGATGGGGGGTTTTTTTTCGTGTCGGTAGCAATGTTACGTGGTCTCATCGACGAGGTAGTTAGGGAGTGGGATGGGAAGGAAATTAACATGGGGTCTATAAAAAAAGTTTAATTTTTGTTAGCTTAATATGTCGAGGCAGAGAAGTCATATTCTCCCGTGGCTATGTGTGTGGGTTTAACCTTATTGTGCAGACAAAACTGGTAATATAAATATGTATTCTGGTTGTGAAATTTAA ATGTTGCCTTTCCACTCCCTCTCCGCCGCCCAGCTTGCGCTTGGCCGCAATCTCACCTTCTTCGAGACCCTCTGGTTCAACTACTCCCACGACAAGTCCGATTACTTCCTCTTTTGCCATAACATTCTCTTCCTGTTCTTGATTTTCTCCTTTATTCCCCTTCCCCTTATCTTTCTCGAGATCTTGCACGCCTCCGGGATTCACAAGTACAAAATTCAGCCCAAAGTCCGGTTGCCATTTTCCGAGATCTTCCGCTGCTACAAGGATGTTATGCGCATGTTCTTCCTTGTTGTTGGTCCTCTTCAGCTCGTCTCATTCCCTTCCATTCAGGTGAATCTCGGGTTTCGATTTCGCGATTTCTACCCTCTTATGATTGGAATCAGGACGGGTTTGCCATTGCCTTCTGGTTGGGAAATTGTTTCTCAATTGGTGGTGTATTTCATGGTGGAGGATTATACCAATTATTGGATTCATAGATTCCTCCATTGCAAATGGGGGTATGAGAATATCCATCAAGTTCATCATGAATACACTGCTCCTATTGGATTTGCAGCTCCTTACGCTCATTGGGCGGAGGTTTTGATCCTTGGAATCCCCTCTTTTCTTGGTCCTGCTATGGTTCCTGGTCATATGATCACCTTCTGGTTGTGGATTGCGCTAAGGCAGATTGAGGCCATTGACACGCATAGTGGGTATGATTTCCCCTGGAGTCTAACGAAATTCATACCATTTTACGGTGGTTCGGACCATCATGATTACCATCACTATGTTGGAGGACAAAGCCATAGCAACTTTGCTTCAGTATTTACCTACTGTGATTATATTTACGGAACTGACAAGGGGTATCGCTATCAAAAGAAGATCCTTAAGAAGGTAAGCATTTTGTTTTCGCCTCCGCCCCCACCTTCACCCCGAAAATTGATTTTGAAGGAAGAAGTGAAAAGCAGTGAAGGATCATACTACAGCACAGCCGAAGATGTTAAAGTGGACTAGACGATGAATCGGGGAACGAGGGATATTCATGTTTTGAAGGATGGGGGGTTTTTTTTCGTGTCGGTAGCAATGTTACGTGGTCTCATCGACGAGGTAGTTAGGGAGTGGGATGGGAAGGAAATTAACATGGGGTCTATAAAAAAAGTTTAATTTTTGTTAGCTTAATATGTCGAGGCAGAGAAGTCATATTCTCCCGTGGCTATGTGTGTGGGTTTAACCTTATTGTGCAGACAAAACTGGTAATATAAATATGTATTCTGGTTGTGAAATTTAA ATGTTGCCTTTCCACTCCCTCTCCGCCGCCCAGCTTGCGCTTGGCCGCAATCTCACCTTCTTCGAGACCCTCTGGTTCAACTACTCCCACGACAAGTCCGATTACTTCCTCTTTTGCCATAACATTCTCTTCCTGTTCTTGATTTTCTCCTTTATTCCCCTTCCCCTTATCTTTCTCGAGATCTTGCACGCCTCCGGGATTCACAAGTACAAAATTCAGCCCAAAGTCCGGTTGCCATTTTCCGAGATCTTCCGCTGCTACAAGGATGTTATGCGCATGTTCTTCCTTGTTGTTGGTCCTCTTCAGCTCGTCTCATTCCCTTCCATTCAGGTGAATCTCGGGTTTCGATTTCGCGATTTCTACCCTCTTATGATTGGAATCAGGACGGGTTTGCCATTGCCTTCTGGTTGGGAAATTGTTTCTCAATTGGTGGTGTATTTCATGGTGGAGGATTATACCAATTATTGGATTCATAGATTCCTCCATTGCAAATGGGGGTATGAGAATATCCATCAAGTTCATCATGAATACACTGCTCCTATTGGATTTGCAGCTCCTTACGCTCATTGGGCGGAGGTTTTGATCCTTGGAATCCCCTCTTTTCTTGGTCCTGCTATGGTTCCTGGTCATATGATCACCTTCTGGTTGTGGATTGCGCTAAGGCAGATTGAGGCCATTGACACGCATAGTGGGTATGATTTCCCCTGGAGTCTAACGAAATTCATACCATTTTACGGTGGTTCGGACCATCATGATTACCATCACTATGTTGGAGGACAAAGCCATAGCAACTTTGCTTCAGTATTTACCTACTGTGATTATATTTACGGAACTGACAAGGGGTATCGCTATCAAAAGAAGATCCTTAAGAAGGTAAGCATTTTGTTTTCGCCTCCGCCCCCACCTTCACCCCGAAAATTGATTTTGAAGGAAGAAGTGAAAAGCAGTGAAGGATCATACTACAGCACAGCCGAAGATGTTAAAGTGGACTAG
BLAST of CmoCh16G010840 vs. Swiss-Prot
Match: SMO12_ARATH (Methylsterol monooxygenase 1-2 OS=Arabidopsis thaliana GN=SMO1-2 PE=2 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.8e-128 Identity = 212/294 (72.11%), Postives = 252/294 (85.71%), Query Frame = 1
BLAST of CmoCh16G010840 vs. Swiss-Prot
Match: SMO11_ARATH (Methylsterol monooxygenase 1-1 OS=Arabidopsis thaliana GN=SMO1-1 PE=1 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125 Identity = 208/294 (70.75%), Postives = 253/294 (86.05%), Query Frame = 1
BLAST of CmoCh16G010840 vs. Swiss-Prot
Match: SMO13_ARATH (Methylsterol monooxygenase 1-3 OS=Arabidopsis thaliana GN=SMO1-3 PE=2 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 2.7e-116 Identity = 190/289 (65.74%), Postives = 239/289 (82.70%), Query Frame = 1
BLAST of CmoCh16G010840 vs. Swiss-Prot
Match: SMO22_ARATH (Methylsterol monooxygenase 2-2 OS=Arabidopsis thaliana GN=SMO2-2 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 4.5e-55 Identity = 113/271 (41.70%), Postives = 156/271 (57.56%), Query Frame = 1
BLAST of CmoCh16G010840 vs. Swiss-Prot
Match: SMO21_ARATH (Methylsterol monooxygenase 2-1 OS=Arabidopsis thaliana GN=SMO2-1 PE=2 SV=2) HSP 1 Score: 198.0 bits (502), Expect = 1.6e-49 Identity = 112/270 (41.48%), Postives = 151/270 (55.93%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TrEMBL
Match: A0A0A0L5P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G036480 PE=3 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 4.2e-161 Identity = 282/330 (85.45%), Postives = 295/330 (89.39%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TrEMBL
Match: A0A067JRW8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20744 PE=3 SV=1) HSP 1 Score: 499.2 bits (1284), Expect = 3.8e-138 Identity = 241/330 (73.03%), Postives = 274/330 (83.03%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TrEMBL
Match: V4TJW5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021364mg PE=3 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 1.9e-137 Identity = 230/292 (78.77%), Postives = 255/292 (87.33%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TrEMBL
Match: A0A067FJY9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021962mg PE=3 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 2.5e-137 Identity = 230/292 (78.77%), Postives = 255/292 (87.33%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TrEMBL
Match: V7AMK5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G081300g PE=3 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 6.1e-136 Identity = 229/296 (77.36%), Postives = 257/296 (86.82%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TAIR10
Match: AT4G22756.1 (AT4G22756.1 sterol C4-methyl oxidase 1-2) HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-129 Identity = 212/294 (72.11%), Postives = 252/294 (85.71%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TAIR10
Match: AT4G12110.1 (AT4G12110.1 sterol-4alpha-methyl oxidase 1-1) HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-126 Identity = 208/294 (70.75%), Postives = 253/294 (86.05%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TAIR10
Match: AT4G22753.1 (AT4G22753.1 sterol 4-alpha methyl oxidase 1-3) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-117 Identity = 190/289 (65.74%), Postives = 239/289 (82.70%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TAIR10
Match: AT1G07420.1 (AT1G07420.1 sterol 4-alpha-methyl-oxidase 2-1) HSP 1 Score: 216.5 bits (550), Expect = 2.5e-56 Identity = 113/271 (41.70%), Postives = 156/271 (57.56%), Query Frame = 1
BLAST of CmoCh16G010840 vs. TAIR10
Match: AT2G29390.1 (AT2G29390.1 sterol 4-alpha-methyl-oxidase 2-2) HSP 1 Score: 198.0 bits (502), Expect = 9.3e-51 Identity = 112/270 (41.48%), Postives = 151/270 (55.93%), Query Frame = 1
BLAST of CmoCh16G010840 vs. NCBI nr
Match: gi|778675550|ref|XP_011650426.1| (PREDICTED: methylsterol monooxygenase 1-2-like [Cucumis sativus]) HSP 1 Score: 575.5 bits (1482), Expect = 6.0e-161 Identity = 282/330 (85.45%), Postives = 295/330 (89.39%), Query Frame = 1
BLAST of CmoCh16G010840 vs. NCBI nr
Match: gi|659096077|ref|XP_008448914.1| (PREDICTED: methylsterol monooxygenase 1-2-like [Cucumis melo]) HSP 1 Score: 572.4 bits (1474), Expect = 5.1e-160 Identity = 283/331 (85.50%), Postives = 294/331 (88.82%), Query Frame = 1
BLAST of CmoCh16G010840 vs. NCBI nr
Match: gi|1009157042|ref|XP_015896561.1| (PREDICTED: methylsterol monooxygenase 1-1 [Ziziphus jujuba]) HSP 1 Score: 507.7 bits (1306), Expect = 1.5e-140 Identity = 246/334 (73.65%), Postives = 278/334 (83.23%), Query Frame = 1
BLAST of CmoCh16G010840 vs. NCBI nr
Match: gi|802741448|ref|XP_012087086.1| (PREDICTED: methylsterol monooxygenase 1-1-like [Jatropha curcas]) HSP 1 Score: 499.2 bits (1284), Expect = 5.5e-138 Identity = 241/330 (73.03%), Postives = 274/330 (83.03%), Query Frame = 1
BLAST of CmoCh16G010840 vs. NCBI nr
Match: gi|567895868|ref|XP_006440422.1| (hypothetical protein CICLE_v10021364mg [Citrus clementina]) HSP 1 Score: 496.9 bits (1278), Expect = 2.7e-137 Identity = 230/292 (78.77%), Postives = 255/292 (87.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|