CmoCh16G008980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G008980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	ATP synthase gamma chain
Location	Cmo_Chr16 : 5274939 .. 5275997 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCACTTTCTCGAACCAAGATTCCACCAAACCCCATTTCCCCCCCTTCTCCGCCGTATCCCCAAATCTCCACCGTCCATTTCAATCCGATGCCGCGGCGGCGGCGCCCGCGACCTCCAATCTCGATTAGACTCCATCAACAACACCCAGAAGCTCACTGAAGCCATGAAGCTCGTCTCCGCCGCCAAAGTCCGCCGAGCCCAAGAAGCCGTAATCAACAGTCGCCCCTTTGCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACCACATGAAATCGATTTCCCCTTTCTAAACCCTGCACCCGTCGGAAAAGTCGCCCTCGTCGTCTTCACCGGCGACCGGGGACTCTGTGGGGGTTTCAACGCTTCCGTGATAAAAACAGCCGACACCCGATTGGCCGAATTGAAAAATCTCGATCTGGGTCACATCCTAATCAGCGTTGGAAAAAAGGGTAACTCGCATTTCCGCCGCCGGTCCGACGTTCAAGTCGATAAATACATAACCGGCTGCGGCGGCGGTTCAGTACCGACAGCAAAAGAAGCACAAACCATTGCAGACATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAACTAATTTACACAAAATTCGTTTCGTCGCTGAAATCTGAGCCTGTGATTGAGACATTGCTGCCATTGTTGGGCGATGGGGAAGGCATGGGAGATGGGGGGTTTAGATTGACAACGAAGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAATTTGGAGGAAATTCCGGCATTGTTGGAGTTCGAACAAGACCCAGTTCAGATCTTGGATGGGATGATAGCTCTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCCATGGCGAGTGAGGTGGCAGCGAGGATGAACGCCATGAGTAATGCTTCTGAGAATGCTCTGGAGTTGAAGAACTCTGTTTTGGTTGCTTATAATCGAGAGAGACAGGCTAAGATTACTGGGGAAATTCTGGAAATTGTTGCTGGAGCTGAGGCTCTTCAAGGATTTTGA

mRNA sequence

ATGACCCACTTTCTCGAACCAAGATTCCACCAAACCCCATTTCCCCCCCTTCTCCGCCGTATCCCCAAATCTCCACCGTCCATTTCAATCCGATGCCGCGGCGGCGGCGCCCGCGACCTCCAATCTCGATTAGACTCCATCAACAACACCCAGAAGCTCACTGAAGCCATGAAGCTCGTCTCCGCCGCCAAAGTCCGCCGAGCCCAAGAAGCCGTAATCAACAGTCGCCCCTTTGCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACCACATGAAATCGATTTCCCCTTTCTAAACCCTGCACCCGTCGGAAAAGTCGCCCTCGTCGTCTTCACCGGCGACCGGGGACTCTGTGGGGGTTTCAACGCTTCCGTGATAAAAACAGCCGACACCCGATTGGCCGAATTGAAAAATCTCGATCTGGGTCACATCCTAATCAGCGTTGGAAAAAAGGGTAACTCGCATTTCCGCCGCCGGTCCGACGTTCAAGTCGATAAATACATAACCGGCTGCGGCGGCGGTTCAGTACCGACAGCAAAAGAAGCACAAACCATTGCAGACATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAACTAATTTACACAAAATTCGTTTCGTCGCTGAAATCTGAGCCTGTGATTGAGACATTGCTGCCATTGTTGGGCGATGGGGAAGGCATGGGAGATGGGGGGTTTAGATTGACAACGAAGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAATTTGGAGGAAATTCCGGCATTGTTGGAGTTCGAACAAGACCCAGTTCAGATCTTGGATGGGATGATAGCTCTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCCATGGCGAGTGAGGTGGCAGCGAGGATGAACGCCATGAGTAATGCTTCTGAGAATGCTCTGGAGTTGAAGAACTCTGTTTTGGTTGCTTATAATCGAGAGAGACAGGCTAAGATTACTGGGGAAATTCTGGAAATTGTTGCTGGAGCTGAGGCTCTTCAAGGATTTTGA

Coding sequence (CDS)

ATGACCCACTTTCTCGAACCAAGATTCCACCAAACCCCATTTCCCCCCCTTCTCCGCCGTATCCCCAAATCTCCACCGTCCATTTCAATCCGATGCCGCGGCGGCGGCGCCCGCGACCTCCAATCTCGATTAGACTCCATCAACAACACCCAGAAGCTCACTGAAGCCATGAAGCTCGTCTCCGCCGCCAAAGTCCGCCGAGCCCAAGAAGCCGTAATCAACAGTCGCCCCTTTGCCCAATCCCTCGCCCAATTTCTCCATTTCATCACCCAACAAATCCAACCACATGAAATCGATTTCCCCTTTCTAAACCCTGCACCCGTCGGAAAAGTCGCCCTCGTCGTCTTCACCGGCGACCGGGGACTCTGTGGGGGTTTCAACGCTTCCGTGATAAAAACAGCCGACACCCGATTGGCCGAATTGAAAAATCTCGATCTGGGTCACATCCTAATCAGCGTTGGAAAAAAGGGTAACTCGCATTTCCGCCGCCGGTCCGACGTTCAAGTCGATAAATACATAACCGGCTGCGGCGGCGGTTCAGTACCGACAGCAAAAGAAGCACAAACCATTGCAGACATTGTGTTTTCTCTGTTCATCAGCGAAGAAGTGGACAAAGTGGAACTAATTTACACAAAATTCGTTTCGTCGCTGAAATCTGAGCCTGTGATTGAGACATTGCTGCCATTGTTGGGCGATGGGGAAGGCATGGGAGATGGGGGGTTTAGATTGACAACGAAGGAGGGGAAATTGAAGGTGGAGAGAGAGGGGAAAAGGGGGAATTTGGAGGAAATTCCGGCATTGTTGGAGTTCGAACAAGACCCAGTTCAGATCTTGGATGGGATGATAGCTCTGTATTTGAACAGCCAGATTTTGAGGGCTTTGCAGGAATCCATGGCGAGTGAGGTGGCAGCGAGGATGAACGCCATGAGTAATGCTTCTGAGAATGCTCTGGAGTTGAAGAACTCTGTTTTGGTTGCTTATAATCGAGAGAGACAGGCTAAGATTACTGGGGAAATTCTGGAAATTGTTGCTGGAGCTGAGGCTCTTCAAGGATTTTGA

Homology

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BLAST of CmoCh16G008980 vs. Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.0e-102
Identity = 209/337 (62.02%), Postives = 253/337 (75.07%), Query Frame = 1


Query: 24  SPPS--ISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQS 83
           SPPS   S+       R+L+ R+DS+ NTQK+TEAMKLV+AAKVRRAQEAV+N RPF+++
Sbjct: 38  SPPSRASSVSPLQASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSET 97

Query: 84  LAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAEL 143
           L + L+ I +Q+Q  ++D P     PV KVALVV TGDRGLCGGFN  +IK A+ R+ EL
Sbjct: 98  LVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKEL 157

Query: 144 KNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISE 203
           K L L + +ISVGKKGNS+F RR  + VDKY+     G++PTAKEAQ +AD VFSLFISE
Sbjct: 158 KGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLE---AGTLPTAKEAQAVADDVFSLFISE 217

Query: 204 EVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKLK 263
           EVDKVEL+YTKFVS +KSEPVI TLLPL   GE             D  FRLTTKEGKL 
Sbjct: 218 EVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLT 277

Query: 264 VEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSN 323
           VERE  R    +   +L+FEQDPVQILD ++ LYLNSQILRALQES+ASE+AARM+AMS+
Sbjct: 278 VERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSS 337

Query: 324 ASENALELKNSVLVAYNRERQAKITGEILEIVAGAEA 349
           AS+NA +LK S+ + YNR+RQAKITGEILEIVAGA A
Sbjct: 338 ASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371

[Close]

BLAST of CmoCh16G008980 vs. Swiss-Prot
Match: ATPG2_ARATH (ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.7e-100
Identity = 207/339 (61.06%), Postives = 253/339 (74.63%), Query Frame = 1


Query: 23  KSP-PSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQS 82
           +SP PSI IR    G R+L+ R+DS+ NTQK+TEAM+LV+AA+VRRAQ+AVI  RPF ++
Sbjct: 51  RSPLPSIQIRA---GIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTET 110

Query: 83  LAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAEL 142
           L + L+ I Q  Q  +IDFP     PV +VALVV TGD+GLCGGFN +V K A  R+ EL
Sbjct: 111 LVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQEL 170

Query: 143 KNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISE 202
           K   +  ++ISVGKKGN++F RR +  VDK I   GGG  PT KEAQ IAD VFSLF+SE
Sbjct: 171 KQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIE--GGGVFPTTKEAQVIADDVFSLFVSE 230

Query: 203 EVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKLK 262
           EVDKVEL+YTKFVS +KS+PVI TLLPL   GE           + D  FRLT+K+GKL 
Sbjct: 231 EVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRLTSKDGKLA 290

Query: 263 VEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSN 322
           VER        EI  L++FEQDPVQILD M+ LYLNSQILRALQES+ASE+A+RMNAMSN
Sbjct: 291 VERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSN 350

Query: 323 ASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQ 351
           A++NA+ELK ++ +AYNR RQAKITGE+LEIVAGAEAL+
Sbjct: 351 ATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEALR 384

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BLAST of CmoCh16G008980 vs. Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 6.3e-100
Identity = 200/324 (61.73%), Postives = 249/324 (76.85%), Query Frame = 1


Query: 36  GARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQP 95
           G RDL+ R++S+ NTQK+TEAMKLV+AAKVRRAQEAV+ +RPF+++L + L+ I +Q+Q 
Sbjct: 56  GLRDLRDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQT 115

Query: 96  HEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAELKNLDLGHILISVGK 155
            +ID P     PV KVALVV TGDRGLCGGFN  +IK A+ R+ +LK L + + +ISVGK
Sbjct: 116 DDIDVPLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGK 175

Query: 156 KGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVS 215
           KGNS+F RR  + VDK++    G ++PTAK+AQ IAD VFSLF+SEEVDKVEL+YTKFVS
Sbjct: 176 KGNSYFIRRPYIPVDKFLE---GSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVS 235

Query: 216 SLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKLKVEREGKRGNLEEIP 275
            +KSEPVI TLLPL   GE             D  FRLTTKEGKL VER+  R    +  
Sbjct: 236 LVKSEPVIHTLLPLSPKGEICDINGNCVDAANDEFFRLTTKEGKLTVERDIIRTKTTDFS 295

Query: 276 ALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSNASENALELKNSVLV 335
            +L+FEQDPVQILD ++ LYLNSQILRALQES+ASE+AARM+AMS+A++NA ELK ++  
Sbjct: 296 PILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSR 355

Query: 336 AYNRERQAKITGEILEIVAGAEAL 350
            YNR+RQAKITGEILEIVAGA+AL
Sbjct: 356 VYNRQRQAKITGEILEIVAGADAL 376

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BLAST of CmoCh16G008980 vs. Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 4.1e-99
Identity = 199/327 (60.86%), Postives = 248/327 (75.84%), Query Frame = 1


Query: 29  SIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQSLAQFLHF 88
           SI+C   G +DL++R+DS+ NTQK+TEAMKLV+AAKVRRAQEAV+N RPF+++L + L+ 
Sbjct: 49  SIQC---GLKDLKNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYS 108

Query: 89  ITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAELKNLDLGH 148
           I +Q+Q  +I+ P     PV KVALVV TGDRGLCGGFN +++K A+ R+AELK L L +
Sbjct: 109 INEQLQTDDIESPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKELGLEY 168

Query: 149 ILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISEEVDKVEL 208
            ++SVG+KGNS+F RR  + VD+++    GGS+PTAKEAQTIAD VFSLF+SEEVDKVEL
Sbjct: 169 TVVSVGRKGNSYFNRRPYIPVDRFLE---GGSLPTAKEAQTIADDVFSLFVSEEVDKVEL 228

Query: 209 IYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKLKVEREGKR 268
           +YTKFVS +KS P+I TLLPL   GE             D  FRLTTKEGKL VER+  R
Sbjct: 229 LYTKFVSLVKSNPIIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDVIR 288

Query: 269 GNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSNASENALE 328
               +   +L+FEQDPVQILD ++ LYLNSQILR LQES+ASE+AARM+AMS+A +NA E
Sbjct: 289 SKTVDFSPILQFEQDPVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASE 348

Query: 329 LKNSVLVAYNRERQAKITGEILEIVAG 346
           LK  +   YNR  QAKITGEILEIVAG
Sbjct: 349 LKTDLTRVYNRATQAKITGEILEIVAG 369

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BLAST of CmoCh16G008980 vs. Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.5e-98
Identity = 193/341 (56.60%), Postives = 262/341 (76.83%), Query Frame = 1


Query: 23  KSPP--SISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQ 82
           +SPP   + +RC     R+L++R+DS+ NTQK+TEAMKLV+AAKVRRAQEAV++SRPF++
Sbjct: 25  RSPPRSGLLVRC---SLRELRTRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSE 84

Query: 83  SLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAE 142
           +L + L+ + Q+IQ  +ID P     PV KVALVV TG+RGLCG FN +V+K A+TR+ E
Sbjct: 85  ALVEVLYNMNQEIQTEDIDLPLTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDE 144

Query: 143 LKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFIS 202
           LK L L + ++SVGKKGN++F+RR  + +++ +      SVPT K++Q I D+V+SLF+S
Sbjct: 145 LKQLGLQYTVVSVGKKGNAYFQRRPYIPLERDLE---VSSVPTVKDSQAICDLVYSLFVS 204

Query: 203 EEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKL 262
           EEVDKVEL+Y+KFVS ++S+P+I+TLLP+   GE             D  FRLTTKEGKL
Sbjct: 205 EEVDKVELLYSKFVSLVRSDPIIQTLLPMSPKGEICDVNGVCVDATEDELFRLTTKEGKL 264

Query: 263 KVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMS 322
            VERE  +   +    +++FEQDPVQILD ++ LYLNSQILRALQES+ASE+AARM+AMS
Sbjct: 265 TVEREKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMS 324

Query: 323 NASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQG 352
           +A++NA+EL+ ++ +AYNR+RQAKITGEILEIVAGA+AL G
Sbjct: 325 SATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGADALAG 359

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BLAST of CmoCh16G008980 vs. TrEMBL
Match: A0A0A0L6B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077620 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 7.4e-156
Identity = 295/352 (83.81%), Postives = 321/352 (91.19%), Query Frame = 1


Query: 1   MTHFLEPRFHQTPFPPLLRRIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLV 60
           M H LEP+FHQTPF  LLRRIPKSP  ISIRC GG  R+L+SRLDSI NTQKLTEAMKLV
Sbjct: 1   MIHSLEPKFHQTPFS-LLRRIPKSPHPISIRC-GGTTRELRSRLDSIKNTQKLTEAMKLV 60

Query: 61  SAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDR 120
           +AAKVRRAQEAVINSRPF+QSLAQFLHF+TQQIQ  +IDFPFLNP PVGKVA+VVFTGDR
Sbjct: 61  AAAKVRRAQEAVINSRPFSQSLAQFLHFLTQQIQREDIDFPFLNPRPVGKVAVVVFTGDR 120

Query: 121 GLCGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGS 180
           GLCGGFNASVIK A+ RLAELKNL++GH +IS+GKKGNS+FRRRSD++VD++ITG GG S
Sbjct: 121 GLCGGFNASVIKKAEARLAELKNLNMGHTVISIGKKGNSYFRRRSDIEVDRFITGGGGVS 180

Query: 181 VPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGMGDGG 240
           +PTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVS LKSEPV+ETLLPLLG+GE MGDGG
Sbjct: 181 LPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVVETLLPLLGEGEAMGDGG 240

Query: 241 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 300
           FRLTT EGKL VEREGK G L EI  LLEFEQDPVQILDGM+ALYLNSQILRALQESMAS
Sbjct: 241 FRLTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMAS 300

Query: 301 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 353
           EVAARMNAMSNASENA+ELK SV +AYNRERQAKITGEILEIVAGAEAL+ F
Sbjct: 301 EVAARMNAMSNASENAMELKKSVTIAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of CmoCh16G008980 vs. TrEMBL
Match: A0A059BMA6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00755 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.2e-105
Identity = 221/352 (62.78%), Postives = 270/352 (76.70%), Query Frame = 1


Query: 13  PFPPLLRR--IPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQE 72
           PF P   R  I +S     IRC   G R+L+ R++S+ NTQK+TEAMKLV+AAKVRRAQE
Sbjct: 38  PFSPWNGRSQIHQSSLDAPIRC---GLRELRERIESVKNTQKITEAMKLVAAAKVRRAQE 97

Query: 73  AVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASV 132
           AVIN+RPFA++L +FL ++ +Q+Q  ++D P  N   V +VALVV TGDRGLCGGFN +V
Sbjct: 98  AVINARPFAETLVEFLCYMNEQLQVEDVDVPLTNVRRVKRVALVVVTGDRGLCGGFNNAV 157

Query: 133 IKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTI 192
           ++ A+TR+AEL+NL L + +ISVGKKGNS+F RR +V VD+ I    G S PTAKEAQ I
Sbjct: 158 LRKAETRIAELENLGLDYTVISVGKKGNSYFMRRPNVPVDRLIE---GDSFPTAKEAQVI 217

Query: 193 ADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGM----------GDGG 252
           AD VFSLF+SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE +          GD  
Sbjct: 218 ADDVFSLFVSEEVDKVELVYTKFVSLIKSDPVICTLLPLSPKGEVLDVNGNSVDADGDEL 277

Query: 253 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 312
           FRLT+KEGKL VE E       EI  LL+FEQDPVQILD M+ LY+NSQILRALQES+AS
Sbjct: 278 FRLTSKEGKLSVEWEQTENRNSEISPLLQFEQDPVQILDAMMPLYMNSQILRALQESIAS 337

Query: 313 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 353
           E+AARMNAMSNA++NA+ELK ++ +AYNRERQAKITGE+LEIVAGAEAL+ F
Sbjct: 338 ELAARMNAMSNATDNAVELKKNLSIAYNRERQAKITGELLEIVAGAEALKDF 383

[Close]

BLAST of CmoCh16G008980 vs. TrEMBL
Match: M4DJH4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.7e-105
Identity = 216/342 (63.16%), Postives = 262/342 (76.61%), Query Frame = 1


Query: 20  RIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFA 79
           R P   PS S++ R G  R+L+ R+D++ NTQK+TEAMKLV+AA+VRRAQEAVIN RPF 
Sbjct: 40  RFPSRSPSPSLQIRAG-IRELRERIDTVKNTQKITEAMKLVAAARVRRAQEAVINCRPFT 99

Query: 80  QSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLA 139
           ++L   LH I Q  Q  ++DFP  N  PV +VALVV TGD+GLCGGFN +VIK A++R+ 
Sbjct: 100 EALVGILHSINQCAQSEDVDFPLSNVRPVKRVALVVVTGDKGLCGGFNNAVIKKANSRVD 159

Query: 140 ELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFI 199
           ELK   +  +++SVGKKGN++F RR DV+VDK I   GGG  PTAKEAQ IAD VFSLF+
Sbjct: 160 ELKQRGIECVVVSVGKKGNAYFSRRDDVEVDKCIQ--GGGVYPTAKEAQVIADDVFSLFV 219

Query: 200 SEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGK 259
           SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE           M D  FRLT+K+GK
Sbjct: 220 SEEVDKVELVYTKFVSLVKSDPVIHTLLPLTLKGESCDVEGVCVDAMEDEMFRLTSKDGK 279

Query: 260 LKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAM 319
           L VER        EI  L++FEQDPVQILD M+ LYLNSQILRALQES+ASE+A+RM+AM
Sbjct: 280 LSVERRKVEVERPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMSAM 339

Query: 320 SNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQG 352
           SNA++NA+ELK S+ VAYNRERQAKITGE+LEIVAGAEAL+G
Sbjct: 340 SNATDNAVELKKSLTVAYNRERQAKITGELLEIVAGAEALRG 378

[Close]

BLAST of CmoCh16G008980 vs. TrEMBL
Match: A0A0D3DPU1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=ATPC2 PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.5e-105
Identity = 217/342 (63.45%), Postives = 261/342 (76.32%), Query Frame = 1


Query: 20  RIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFA 79
           R P   PS S++ R G  R+L+ R+D++ NTQK+TEAMKLV+AA+VRRAQEAVIN RPF 
Sbjct: 40  RFPSRSPSPSLQIRAG-IRELRERIDTVKNTQKITEAMKLVAAARVRRAQEAVINCRPFT 99

Query: 80  QSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLA 139
           ++L   LH I Q  Q  +IDFP  N  PV +VALVV TGD+GLCGGFN +VIK A+ R+ 
Sbjct: 100 ETLVGILHSINQCAQLEDIDFPLSNVRPVKRVALVVVTGDKGLCGGFNNAVIKKANVRVD 159

Query: 140 ELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFI 199
           ELK   +  +++SVGKKGN++F RR DV+VDK I   GGG  PTAKEAQ IAD VFSLF+
Sbjct: 160 ELKQRGIECVVVSVGKKGNAYFSRRDDVEVDKCIE--GGGVYPTAKEAQVIADDVFSLFV 219

Query: 200 SEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGK 259
           SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE           M D  FRLT+K+GK
Sbjct: 220 SEEVDKVELVYTKFVSLVKSDPVIHTLLPLTMKGESCDVEGVCVDAMEDEMFRLTSKDGK 279

Query: 260 LKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAM 319
           L VER        EI  L++FEQDPVQILD M+ LYLNSQILRALQES+ASE+A+RM+AM
Sbjct: 280 LSVERRKVEVERPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMSAM 339

Query: 320 SNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQG 352
           SNA++NA+ELK S+ VAYNRERQAKITGE+LEIVAGAEAL+G
Sbjct: 340 SNATDNAVELKKSLTVAYNRERQAKITGELLEIVAGAEALRG 378

[Close]

BLAST of CmoCh16G008980 vs. TrEMBL
Match: A0A078E805_BRANA (BnaA08g23770D protein OS=Brassica napus GN=BnaA08g23770D PE=3 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.5e-105
Identity = 216/342 (63.16%), Postives = 262/342 (76.61%), Query Frame = 1


Query: 20  RIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFA 79
           R P   PS S++ R G  R+L+ R+D++ NTQK+TEAMKLV+AA+VRRAQEAVIN RPF 
Sbjct: 40  RFPSRSPSPSLQIRAG-IRELRERIDTVKNTQKITEAMKLVAAARVRRAQEAVINCRPFT 99

Query: 80  QSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLA 139
           ++L   LH I Q  Q  ++DFP  N  PV +VALVV TGD+GLCGGFN +VIK A++R+ 
Sbjct: 100 EALVGILHSINQCAQLEDVDFPLSNVRPVKRVALVVVTGDKGLCGGFNNAVIKKANSRVD 159

Query: 140 ELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFI 199
           ELK   +  +++SVGKKGN++F RR DV+VDK I   GGG  PTAKEAQ IAD VFSLF+
Sbjct: 160 ELKQRGIECVVVSVGKKGNAYFSRRDDVEVDKCIQ--GGGVYPTAKEAQVIADDVFSLFV 219

Query: 200 SEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGK 259
           SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE           M D  FRLT+K+GK
Sbjct: 220 SEEVDKVELVYTKFVSLVKSDPVIHTLLPLAMKGESCDVEGVCVDAMEDEMFRLTSKDGK 279

Query: 260 LKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAM 319
           L VER        EI  L++FEQDPVQILD M+ LYLNSQILRALQES+ASE+A+RM+AM
Sbjct: 280 LSVERRKVEVERPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMSAM 339

Query: 320 SNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQG 352
           SNA++NA+ELK S+ VAYNRERQAKITGE+LEIVAGAEAL+G
Sbjct: 340 SNATDNAVELKKSLTVAYNRERQAKITGELLEIVAGAEALRG 378

[Close]

BLAST of CmoCh16G008980 vs. TAIR10
Match: AT4G04640.1 (AT4G04640.1 ATPase, F1 complex, gamma subunit protein)

HSP 1 Score: 372.9 bits (956), Expect = 2.2e-103
Identity = 209/337 (62.02%), Postives = 253/337 (75.07%), Query Frame = 1


Query: 24  SPPS--ISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQS 83
           SPPS   S+       R+L+ R+DS+ NTQK+TEAMKLV+AAKVRRAQEAV+N RPF+++
Sbjct: 38  SPPSRASSVSPLQASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSET 97

Query: 84  LAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAEL 143
           L + L+ I +Q+Q  ++D P     PV KVALVV TGDRGLCGGFN  +IK A+ R+ EL
Sbjct: 98  LVEVLYNINEQLQTDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKEL 157

Query: 144 KNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISE 203
           K L L + +ISVGKKGNS+F RR  + VDKY+     G++PTAKEAQ +AD VFSLFISE
Sbjct: 158 KGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLE---AGTLPTAKEAQAVADDVFSLFISE 217

Query: 204 EVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKLK 263
           EVDKVEL+YTKFVS +KSEPVI TLLPL   GE             D  FRLTTKEGKL 
Sbjct: 218 EVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLT 277

Query: 264 VEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSN 323
           VERE  R    +   +L+FEQDPVQILD ++ LYLNSQILRALQES+ASE+AARM+AMS+
Sbjct: 278 VERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSS 337

Query: 324 ASENALELKNSVLVAYNRERQAKITGEILEIVAGAEA 349
           AS+NA +LK S+ + YNR+RQAKITGEILEIVAGA A
Sbjct: 338 ASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371

[Close]

BLAST of CmoCh16G008980 vs. TAIR10
Match: AT1G15700.1 (AT1G15700.1 ATPase, F1 complex, gamma subunit protein)

HSP 1 Score: 366.3 bits (939), Expect = 2.1e-101
Identity = 207/339 (61.06%), Postives = 253/339 (74.63%), Query Frame = 1


Query: 23  KSP-PSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQS 82
           +SP PSI IR    G R+L+ R+DS+ NTQK+TEAM+LV+AA+VRRAQ+AVI  RPF ++
Sbjct: 51  RSPLPSIQIRA---GIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTET 110

Query: 83  LAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAEL 142
           L + L+ I Q  Q  +IDFP     PV +VALVV TGD+GLCGGFN +V K A  R+ EL
Sbjct: 111 LVEILYSINQSAQLEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQEL 170

Query: 143 KNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISE 202
           K   +  ++ISVGKKGN++F RR +  VDK I   GGG  PT KEAQ IAD VFSLF+SE
Sbjct: 171 KQRGIDCVVISVGKKGNAYFSRRDEFDVDKCIE--GGGVFPTTKEAQVIADDVFSLFVSE 230

Query: 203 EVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGKLK 262
           EVDKVEL+YTKFVS +KS+PVI TLLPL   GE           + D  FRLT+K+GKL 
Sbjct: 231 EVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGESCDVKGECVDAIEDEMFRLTSKDGKLA 290

Query: 263 VEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAMSN 322
           VER        EI  L++FEQDPVQILD M+ LYLNSQILRALQES+ASE+A+RMNAMSN
Sbjct: 291 VERTKLEVEKPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMNAMSN 350

Query: 323 ASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQ 351
           A++NA+ELK ++ +AYNR RQAKITGE+LEIVAGAEAL+
Sbjct: 351 ATDNAVELKKNLTMAYNRARQAKITGELLEIVAGAEALR 384

[Close]

BLAST of CmoCh16G008980 vs. TAIR10
Match: AT2G33040.1 (AT2G33040.1 gamma subunit of Mt ATP synthase)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-23
Identity = 88/311 (28.30%), Postives = 151/311 (48.55%), Query Frame = 1


Query: 40  LQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEID 99
           +++R+ S+ N QK+T+AMK+V+A+K+R  Q    NSR   Q     L            D
Sbjct: 48  VRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPFTALLG-----------D 107

Query: 100 FPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNS 159
            P ++   V K  +V  + D+GLCGG N++V+K +          +     + VG+K  +
Sbjct: 108 NPSID---VKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKA 167

Query: 160 HFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKS 219
              R S   +   +T      +  A+ +    DI+ ++    E D + ++Y KF S +  
Sbjct: 168 IMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNV----EFDALRIVYNKFHSVVAF 227

Query: 220 EPVIETLLPLLGDGEGMGDGGFRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILD 279
            P + T+L               +  KE ++     GK G L+     +E  +   +IL 
Sbjct: 228 LPTVSTVLSP------------EIIEKESEIG----GKLGELDSYE--IEGGETKGEILQ 287

Query: 280 GMIALYLNSQILRALQESMASEVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEI 339
            +     +  +  A+ E+  SE+ ARM+AM ++S NA E+ + + + YNR RQA IT E+
Sbjct: 288 NLAEFQFSCVMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTEL 322

Query: 340 LEIVAGAEALQ 351
           +EI++GA AL+
Sbjct: 348 IEIISGASALE 322

[Close]

BLAST of CmoCh16G008980 vs. NCBI nr
Match: gi|659126889|ref|XP_008463415.1| (PREDICTED: LOW QUALITY PROTEIN: ATP synthase gamma chain 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 558.9 bits (1439), Expect = 6.3e-156
Identity = 297/352 (84.38%), Postives = 319/352 (90.62%), Query Frame = 1


Query: 1   MTHFLEPRFHQTPFPPLLRRIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLV 60
           M H LEP+FHQTP P LLRRIPKSP  ISIRC GG  R+L+SRLDSI NTQKLTEAMKLV
Sbjct: 1   MIHSLEPKFHQTPLP-LLRRIPKSPHPISIRC-GGATRELRSRLDSIKNTQKLTEAMKLV 60

Query: 61  SAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDR 120
           +AAKVRRAQEAVINSRPF+QSLAQFLHFITQQIQ  +IDFPFLNP PV KVA+VVFTGDR
Sbjct: 61  AAAKVRRAQEAVINSRPFSQSLAQFLHFITQQIQREDIDFPFLNPRPVRKVAVVVFTGDR 120

Query: 121 GLCGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGS 180
           GLCGGFNASV+K A+TRLAELKNL+LGH LISVGKKGNS+FRRRSD++VD++ITGC G S
Sbjct: 121 GLCGGFNASVLKKAETRLAELKNLNLGHTLISVGKKGNSYFRRRSDIEVDRFITGCSGVS 180

Query: 181 VPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGMGDGG 240
           +PTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVS LKSEPVIETLLPLLG+GE MGDGG
Sbjct: 181 LPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVIETLLPLLGEGEAMGDGG 240

Query: 241 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 300
           FRLTT EGKL VEREGK G +  I  LLEFEQDPVQILDGM+ALYLNSQILRALQESMAS
Sbjct: 241 FRLTTAEGKLTVEREGKGGGIRGISPLLEFEQDPVQILDGMMALYLNSQILRALQESMAS 300

Query: 301 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 353
           EVAARMNAMSNASENA+ELK SV  AYNRERQAKITGEILEIVAGAEAL+ F
Sbjct: 301 EVAARMNAMSNASENAMELKKSVTSAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of CmoCh16G008980 vs. NCBI nr
Match: gi|449470449|ref|XP_004152929.1| (PREDICTED: ATP synthase gamma chain 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 558.1 bits (1437), Expect = 1.1e-155
Identity = 295/352 (83.81%), Postives = 321/352 (91.19%), Query Frame = 1


Query: 1   MTHFLEPRFHQTPFPPLLRRIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLV 60
           M H LEP+FHQTPF  LLRRIPKSP  ISIRC GG  R+L+SRLDSI NTQKLTEAMKLV
Sbjct: 1   MIHSLEPKFHQTPFS-LLRRIPKSPHPISIRC-GGTTRELRSRLDSIKNTQKLTEAMKLV 60

Query: 61  SAAKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDR 120
           +AAKVRRAQEAVINSRPF+QSLAQFLHF+TQQIQ  +IDFPFLNP PVGKVA+VVFTGDR
Sbjct: 61  AAAKVRRAQEAVINSRPFSQSLAQFLHFLTQQIQREDIDFPFLNPRPVGKVAVVVFTGDR 120

Query: 121 GLCGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGS 180
           GLCGGFNASVIK A+ RLAELKNL++GH +IS+GKKGNS+FRRRSD++VD++ITG GG S
Sbjct: 121 GLCGGFNASVIKKAEARLAELKNLNMGHTVISIGKKGNSYFRRRSDIEVDRFITGGGGVS 180

Query: 181 VPTAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGMGDGG 240
           +PTAKEAQ IADIVFSLFISEEVDKVE+IYTKFVS LKSEPV+ETLLPLLG+GE MGDGG
Sbjct: 181 LPTAKEAQAIADIVFSLFISEEVDKVEVIYTKFVSLLKSEPVVETLLPLLGEGEAMGDGG 240

Query: 241 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 300
           FRLTT EGKL VEREGK G L EI  LLEFEQDPVQILDGM+ALYLNSQILRALQESMAS
Sbjct: 241 FRLTTAEGKLTVEREGKGGELGEISPLLEFEQDPVQILDGMMALYLNSQILRALQESMAS 300

Query: 301 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 353
           EVAARMNAMSNASENA+ELK SV +AYNRERQAKITGEILEIVAGAEAL+ F
Sbjct: 301 EVAARMNAMSNASENAMELKKSVTIAYNRERQAKITGEILEIVAGAEALKEF 350

[Close]

BLAST of CmoCh16G008980 vs. NCBI nr
Match: gi|1009111168|ref|XP_015899601.1| (PREDICTED: ATP synthase gamma chain, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 391.7 bits (1005), Expect = 1.3e-105
Identity = 224/360 (62.22%), Postives = 269/360 (74.72%), Query Frame = 1


Query: 9   FHQTPFPPLLRRIP------KSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSA 68
           F Q P  P L  +P      +S  + +I+C   G R+L+ R+DSI NTQK+TEAMKLVSA
Sbjct: 20  FLQNP-NPFLSPVPCPGGRSQSSSTAAIKC---GLRELRERIDSIKNTQKITEAMKLVSA 79

Query: 69  AKVRRAQEAVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGL 128
           AK+RRAQEAVINSRPF+++L + L+ I +Q+Q   ID P  +  PV KVALV+ T DRGL
Sbjct: 80  AKIRRAQEAVINSRPFSETLIEVLYSINEQLQSEAIDVPLTSVRPVKKVALVIITSDRGL 139

Query: 129 CGGFNASVIKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVP 188
           CGGFN ++IK A+TR+AELKNL L + +ISVGKKGNS+F RR +V V+ +I    GG+ P
Sbjct: 140 CGGFNNAIIKKAETRIAELKNLGLDYAVISVGKKGNSYFMRRPNVPVENFIE---GGTFP 199

Query: 189 TAKEAQTIADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE-------- 248
           TAK+AQ IAD VFSLF+SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE        
Sbjct: 200 TAKDAQMIADQVFSLFVSEEVDKVELLYTKFVSLIKSDPVIHTLLPLSPKGEVVDVNGNC 259

Query: 249 --GMGDGGFRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILR 308
              M D  FRLTTKEGKL VERE      +E   LL+FEQDPVQILD M+ LY+NSQILR
Sbjct: 260 VDAMEDEFFRLTTKEGKLTVERESLSRKRKEFSPLLQFEQDPVQILDAMMPLYMNSQILR 319

Query: 309 ALQESMASEVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 353
           ALQES ASE+AARMNAMSNA++NA+ELK ++   YNRERQAKITGEILEIVAGAEAL  F
Sbjct: 320 ALQESTASELAARMNAMSNATDNAVELKKTLSNVYNRERQAKITGEILEIVAGAEALIEF 372

[Close]

BLAST of CmoCh16G008980 vs. NCBI nr
Match: gi|702363484|ref|XP_010060339.1| (PREDICTED: ATP synthase gamma chain, chloroplastic-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 391.3 bits (1004), Expect = 1.7e-105
Identity = 221/352 (62.78%), Postives = 270/352 (76.70%), Query Frame = 1


Query: 13  PFPPLLRR--IPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQE 72
           PF P   R  I +S     IRC   G R+L+ R++S+ NTQK+TEAMKLV+AAKVRRAQE
Sbjct: 38  PFSPWNGRSQIHQSSLDAPIRC---GLRELRERIESVKNTQKITEAMKLVAAAKVRRAQE 97

Query: 73  AVINSRPFAQSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASV 132
           AVIN+RPFA++L +FL ++ +Q+Q  ++D P  N   V +VALVV TGDRGLCGGFN +V
Sbjct: 98  AVINARPFAETLVEFLCYMNEQLQVEDVDVPLTNVRRVKRVALVVVTGDRGLCGGFNNAV 157

Query: 133 IKTADTRLAELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTI 192
           ++ A+TR+AEL+NL L + +ISVGKKGNS+F RR +V VD+ I    G S PTAKEAQ I
Sbjct: 158 LRKAETRIAELENLGLDYTVISVGKKGNSYFMRRPNVPVDRLIE---GDSFPTAKEAQVI 217

Query: 193 ADIVFSLFISEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGEGM----------GDGG 252
           AD VFSLF+SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE +          GD  
Sbjct: 218 ADDVFSLFVSEEVDKVELVYTKFVSLIKSDPVICTLLPLSPKGEVLDVNGNSVDADGDEL 277

Query: 253 FRLTTKEGKLKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMAS 312
           FRLT+KEGKL VE E       EI  LL+FEQDPVQILD M+ LY+NSQILRALQES+AS
Sbjct: 278 FRLTSKEGKLSVEWEQTENRNSEISPLLQFEQDPVQILDAMMPLYMNSQILRALQESIAS 337

Query: 313 EVAARMNAMSNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQGF 353
           E+AARMNAMSNA++NA+ELK ++ +AYNRERQAKITGE+LEIVAGAEAL+ F
Sbjct: 338 ELAARMNAMSNATDNAVELKKNLSIAYNRERQAKITGELLEIVAGAEALKDF 383

[Close]

BLAST of CmoCh16G008980 vs. NCBI nr
Match: gi|685349817|ref|XP_009110475.1| (PREDICTED: ATP synthase gamma chain 2, chloroplastic [Brassica rapa])

HSP 1 Score: 390.2 bits (1001), Expect = 3.8e-105
Identity = 216/342 (63.16%), Postives = 262/342 (76.61%), Query Frame = 1


Query: 20  RIPKSPPSISIRCRGGGARDLQSRLDSINNTQKLTEAMKLVSAAKVRRAQEAVINSRPFA 79
           R P   PS S++ R G  R+L+ R+D++ NTQK+TEAMKLV+AA+VRRAQEAVIN RPF 
Sbjct: 40  RFPSRSPSPSLQIRAG-IRELRERIDTVKNTQKITEAMKLVAAARVRRAQEAVINCRPFT 99

Query: 80  QSLAQFLHFITQQIQPHEIDFPFLNPAPVGKVALVVFTGDRGLCGGFNASVIKTADTRLA 139
           ++L   LH I Q  Q  ++DFP  N  PV +VALVV TGD+GLCGGFN +VIK A++R+ 
Sbjct: 100 EALVGILHSINQCAQSEDVDFPLSNVRPVKRVALVVVTGDKGLCGGFNNAVIKKANSRVD 159

Query: 140 ELKNLDLGHILISVGKKGNSHFRRRSDVQVDKYITGCGGGSVPTAKEAQTIADIVFSLFI 199
           ELK   +  +++SVGKKGN++F RR DV+VDK I   GGG  PTAKEAQ IAD VFSLF+
Sbjct: 160 ELKQRGIECVVVSVGKKGNAYFSRRDDVEVDKCIQ--GGGVYPTAKEAQVIADDVFSLFV 219

Query: 200 SEEVDKVELIYTKFVSSLKSEPVIETLLPLLGDGE----------GMGDGGFRLTTKEGK 259
           SEEVDKVEL+YTKFVS +KS+PVI TLLPL   GE           M D  FRLT+K+GK
Sbjct: 220 SEEVDKVELVYTKFVSLVKSDPVIHTLLPLTLKGESCDVEGVCVDAMEDEMFRLTSKDGK 279

Query: 260 LKVEREGKRGNLEEIPALLEFEQDPVQILDGMIALYLNSQILRALQESMASEVAARMNAM 319
           L VER        EI  L++FEQDPVQILD M+ LYLNSQILRALQES+ASE+A+RM+AM
Sbjct: 280 LSVERRKVEVERPEISPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELASRMSAM 339

Query: 320 SNASENALELKNSVLVAYNRERQAKITGEILEIVAGAEALQG 352
           SNA++NA+ELK S+ VAYNRERQAKITGE+LEIVAGAEAL+G
Sbjct: 340 SNATDNAVELKKSLTVAYNRERQAKITGELLEIVAGAEALRG 378

The following BLAST results are available for this feature:

BLAST of CmoCh16G008980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATPG1_ARATH	4.0e-102	62.02	ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 ...	[more]
ATPG2_ARATH	3.7e-100	61.06	ATP synthase gamma chain 2, chloroplastic OS=Arabidopsis thaliana GN=ATPC2 PE=2 ...	[more]
ATPG_TOBAC	6.3e-100	61.73	ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1	[more]
ATPG_PEA	4.1e-99	60.86	ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1	[more]
ATPG_MAIZE	3.5e-98	56.60	ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1	[more]

BLAST of CmoCh16G008980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6B0_CUCSA	7.4e-156	83.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077620 PE=3 SV=1	[more]
A0A059BMA6_EUCGR	1.2e-105	62.78	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00755 PE=3 SV=1	[more]
M4DJH4_BRARP	2.7e-105	63.16	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]
A0A0D3DPU1_BRAOL	3.5e-105	63.45	Uncharacterized protein OS=Brassica oleracea var. oleracea GN=ATPC2 PE=3 SV=1	[more]
A0A078E805_BRANA	3.5e-105	63.16	BnaA08g23770D protein OS=Brassica napus GN=BnaA08g23770D PE=3 SV=1	[more]

BLAST of CmoCh16G008980 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04640.1	2.2e-103	62.02	ATPase, F1 complex, gamma subunit protein	[more]
AT1G15700.1	2.1e-101	61.06	ATPase, F1 complex, gamma subunit protein	[more]
AT2G33040.1	2.3e-23	28.30	gamma subunit of Mt ATP synthase	[more]

BLAST of CmoCh16G008980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126889\|ref\|XP_008463415.1\|	6.3e-156	84.38	PREDICTED: LOW QUALITY PROTEIN: ATP synthase gamma chain 1, chloroplastic-like [...	[more]
gi\|449470449\|ref\|XP_004152929.1\|	1.1e-155	83.81	PREDICTED: ATP synthase gamma chain 1, chloroplastic-like [Cucumis sativus]	[more]
gi\|1009111168\|ref\|XP_015899601.1\|	1.3e-105	62.22	PREDICTED: ATP synthase gamma chain, chloroplastic-like [Ziziphus jujuba]	[more]
gi\|702363484\|ref\|XP_010060339.1\|	1.7e-105	62.78	PREDICTED: ATP synthase gamma chain, chloroplastic-like isoform X1 [Eucalyptus g...	[more]
gi\|685349817\|ref\|XP_009110475.1\|	3.8e-105	63.16	PREDICTED: ATP synthase gamma chain 2, chloroplastic [Brassica rapa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000131	ATP_synth_F1_gsu
IPR023632	ATP_synth_F1_gsu_CS
IPR023633	ATPase, F1 complex, gamma subunit domain

Vocabulary: **Cellular Component**
Term	Definition
GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)

Vocabulary: **Molecular Function**
Term	Definition
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
GO:0046961	proton-transporting ATPase activity, rotational mechanism

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008980.1	CmoCh16G008980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000131	ATPase, F1 complex, gamma subunit	PRINTS	PR00126	ATPASEGAMMA	coord: 296..315 score: 2.8E-37coord: 327..348 score: 2.8E-37coord: 108..127 score: 2.8E-37coord: 204..221 score: 2.8
IPR000131	ATPase, F1 complex, gamma subunit	HAMAP	MF_00815	ATP_synth_gamma_bact	coord: 34..349 score: 29
IPR000131	ATPase, F1 complex, gamma subunit	PANTHER	PTHR11693	ATP SYNTHASE GAMMA CHAIN	coord: 24..351 score: 7.6E
IPR000131	ATPase, F1 complex, gamma subunit	PFAM	PF00231	ATP-synt	coord: 38..349 score: 2.6
IPR000131	ATPase, F1 complex, gamma subunit	TIGRFAMs	TIGR01146	TIGR01146	coord: 37..349 score: 6.3
IPR023632	ATPase, F1 complex, gamma subunit conserved site	PROSITE	PS00153	ATPASE_GAMMA	coord: 335..348 scor
IPR023633	ATPase, F1 complex, gamma subunit domain	unknown	SSF52943	ATP synthase (F1-ATPase), gamma subunit	coord: 37..236 score: 1.83E-74coord: 266..349 score: 1.83
None	No IPR available	GENE3D	G3DSA:1.10.287.80		coord: 298..344 score: 1.8E-22coord: 52..93 score: 7.8E-25coord: 264..297 score: 7.8
None	No IPR available	GENE3D	G3DSA:3.40.1380.10		coord: 101..229 score: 1.7
None	No IPR available	PANTHER	PTHR11693:SF21	ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC-RELATED	coord: 24..351 score: 7.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G008980	Cucsa.059970	Cucumber (Gy14) v1	cgycmoB0075
CmoCh16G008980	CmaCh16G008640	Cucurbita maxima (Rimu)	cmacmoB324
CmoCh16G008980	Cla005311	Watermelon (97103) v1	cmowmB289
CmoCh16G008980	Csa3G077620	Cucumber (Chinese Long) v2	cmocuB309
CmoCh16G008980	MELO3C025376	Melon (DHL92) v3.5.1	cmomeB283
CmoCh16G008980	ClCG10G005390	Watermelon (Charleston Gray)	cmowcgB274
CmoCh16G008980	CSPI03G05120	Wild cucumber (PI 183967)	cmocpiB317
CmoCh16G008980	Lsi05G005960	Bottle gourd (USVL1VR-Ls)	cmolsiB301
CmoCh16G008980	Cp4.1LG00g00020	Cucurbita pepo (Zucchini)	cmocpeB301
CmoCh16G008980	MELO3C025376.2	Melon (DHL92) v3.6.1	cmomedB322
CmoCh16G008980	CsaV3_3G005120	Cucumber (Chinese Long) v3	cmocucB0372
CmoCh16G008980	Cla97C10G189640	Watermelon (97103) v2	cmowmbB317
CmoCh16G008980	Bhi11G000479	Wax gourd	cmowgoB0406
CmoCh16G008980	CsGy3G005180	Cucumber (Gy14) v2	cgybcmoB303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G008980	Cucurbita moschata (Rifu)	cmocmoB285
CmoCh16G008980	Cucurbita moschata (Rifu)	cmocmoB290
CmoCh16G008980	Cucurbita maxima (Rimu)	cmacmoB700
CmoCh16G008980	Cucurbita maxima (Rimu)	cmacmoB704
CmoCh16G008980	Melon (DHL92) v3.5.1	cmomeB293
CmoCh16G008980	Cucurbita pepo (Zucchini)	cmocpeB312
CmoCh16G008980	Cucurbita pepo (Zucchini)	cmocpeB317
CmoCh16G008980	Silver-seed gourd	carcmoB0920
CmoCh16G008980	Silver-seed gourd	carcmoB0921