CmoCh16G008140 (gene) Cucurbita moschata (Rifu)

NameCmoCh16G008140
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPHD finger alfin-like protein
LocationCmo_Chr16 : 4208228 .. 4210835 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAGAAAGACTGGTTATCACTGGTTGCTGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGGTTTGGGAAGAATGAAAGGTATGTAACTGTACTTTATGACTATAATAAATTCCTTATAAGACATTTTCAGCTTTAATACTACCGTTTCTTAAATTTTTTATGATTCGGTCCTATGCATCATCATCGCTGTATAATTGGGAAATAAATGTATTAAGAACTGCTTCACCATATGCCTCTTCCTCTTTTCCATATAGTGATAATAATTTGACACATAATTGTGAATGGAGCCAGGGAATGCGGTTTACTAGTTGTTCTAGCATGTTCTGTTTGAAAATATTTAGAAAAAAACAATGTAATTGAGGCGCTTGAATGACACTGTCTATGCACGAGGCTTGAATAATTTTGTGTGCTAAGTTACTCTTCCTTTATTTATTTTTTTACTTTAGGATGTATCTTCGTGTCCTGGGGGAATTTTTTAACATCGAGTTGACTTTAGTCCTCTTGTCTCATCTTTCATTATTATTTTCTTCAGAAAAACTTATATCTACTTGCCATGATGTCATTTTAATGAATTATTTGGCGTGTTGTTTTTCATGTGCATTCAAATGCTTTAATCTCTGGTTTGTTTCATGTCATCAATGACATCTTCCATGGAACACCTTGTAGTCTCTGCTTTCCCATTTCATTTTGTCACTTACTATAACTCGCAAATCCATACGTGAATTACACGTGACAAACTATTATTTATAAGGGTGTTCTAGTGCGTTGTAGATTCTTATATAAGACTTGTATCTCCTACGAAAATAGCTTAAACTAAACTCAATTCTAGCTTGAGAATTGTAGAATGTATCTTTTCAAAAATGTATTTCTTTTTTGTTTTCTCATAAAAAAATATGTAAACACTTTAACATACTGTCTTTGTCATGCTCGTATCATATATTTTTCAGAAGTAACTTGTCAGGCCCATGTTTCTTTGGGAAAAGACATAGTTTTATTTCACTTTCTTTATTTGGCTAATTTTTATTAACTCTCTTCAATAGATTCTTATTAAGTCAAATCTAAGCTATACTTTGGTGAGAATGCACTTCCTTTTTTCGTCTTTCCTTTATTTATTTCTACGAAGATCTGAATGGTGCTACAAGGAAATGGGATTACACGATAAGGTCTGGCTTCCTTTTGTACTGTGCATCACTCATTTTAGACTACGATTGTTGACAAAGAGGAGAACTTTTGTAATTTCTTAAGGAACCTGTAGGGGTGAACCTTTTTATGGAGTCATACAGTCAAAAGGATTTTTACCTCTTGTTCAGGCTAATATTTGAGGTGAGCAGCTGAGTGAAAGAAAGCCCTATGGATAATTTGACCTGTCTTTTGCCTTCTTTGCTTGAACCTGTTAGTTGGTTCTCAAATTAATGTAGCTTTTGTTCTTGAATTTATTTTTGCATGCCTTACTCCTTGTGAACTTGTAGGCACATTAATCTCCATGTTTTACGGATATCAGGAAATTAGCAGGATTCTTGTGGTGTTTTTAAGCATGTTATGATTTTAATCTTACTTTTGCGTTTTGCCATGTCTTGTTCATTTGAATTACACCTTGATCTACTAAAGTCATGCTTATGTGGCATATTAAGCCATTTTATTTTAGTTGCATTTGTGTATTTTTCAGCACATGACGATATTTAAATATGGTAAATATCCAGCAATTCCTCCATCGTTAAAGGAGGAAAATATAGTCATCAATTCTTAAGATGACTTCATTTATGCCAATAATATATTTTGGCCATGGTCTGAGACAAACATGACTCAGTTTGAGATTGGACATTTCAGGAAGAGGCTATTCCAGTTGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGAGTGGAAATGGTAAGCAGTCAAAAGAACAGTCTGCCACTCATAACAATGGCAGCAAAAGCAAGTCGAGTGGGAAGACGGTAAGTAATTTCCAAAGTTCATGATCAATTCAGCAATGTTCTTCATTGTTTTGCCGCAACCTCATACCGTACATGAATCCTGCTATTCTTTGCCGTCTTACAGCAGTCTCGGCAATTGGAGTCTCATAGCAAGGGAGTGAAGATGTCTCCACCACCAAAAGAAGACGAAGATAGCGGGGAAGATGAGGAGGAAGAAGAAGACGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAACGACGAATTCTGGATTTGTTGCGATGTGTGCGAAAGATGGTTCCATGGAAAATGCGTGAAGATTACTCCCGCAAAGGCGGAGCATATCAAGCAGTACAAGTGTCCAAGTTGCAGTAACAAGAGGGCAAGGGTTTGAATTTAGGATCTTAAAGTTGGAGATAATTGCAAGGAACGAAAAAAGAAGACGAAGAAGAAGAAAGCAAGCAGGCAGCACGACTCCAGAACTTGTTATTACGATTATAAAGCTAAGTATGGTTGTTAAAATCAGTTGACAAAATTTGGTGAATTGGGATGAAATTTCAAGTTTTCCTACTCGTGTTATTCTTCTGTCCAATTCTAGAATTAGCGGTTTCTGTATGAATCCCCCCCCCCC

mRNA sequence

ATGCAGGAGAAAGACTGGTTATCACTGGTTGCTGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGGTTTGGGAAGAATGAAAGGAAGAGGCTATTCCAGTTGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGAGTGGAAATGGTAAGCAGTCAAAAGAACAGTCTGCCACTCATAACAATGGCAGCAAAAGCAAGTCGAGTGGGAAGACGCAGTCTCGGCAATTGGAGTCTCATAGCAAGGGAGTGAAGATGTCTCCACCACCAAAAGAAGACGAAGATAGCGGGGAAGATGAGGAGGAAGAAGAAGACGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAACGACGAATTCTGGATTTGTTGCGATGTGTGCGAAAGATGGTTCCATGGAAAATGCGTGAAGATTACTCCCGCAAAGGCGGAGCATATCAAGCAGTACAAGTGTCCAAGTTGCAGTAACAAGAGGGCAAGGGTTTGAATTTAGGATCTTAAAGTTGGAGATAATTGCAAGGAACGAAAAAAGAAGACGAAGAAGAAGAAAGCAAGCAGGCAGCACGACTCCAGAACTTGTTATTACGATTATAAAGCTAAGTATGGTTGTTAAAATCAGTTGACAAAATTTGGTGAATTGGGATGAAATTTCAAGTTTTCCTACTCGTGTTATTCTTCTGTCCAATTCTAGAATTAGCGGTTTCTGTATGAATCCCCCCCCCCC

Coding sequence (CDS)

ATGCAGGAGAAAGACTGGTTATCACTGGTTGCTGTTCACAGTGACTCATGGTTGCTTGCTGTTGCATTCTATTTTGGTGCTCGTTTTGGGTTTGGGAAGAATGAAAGGAAGAGGCTATTCCAGTTGATCAACGATCTCCCAAGTGTATTTGAAGTTGTGAGTGGAAATGGTAAGCAGTCAAAAGAACAGTCTGCCACTCATAACAATGGCAGCAAAAGCAAGTCGAGTGGGAAGACGCAGTCTCGGCAATTGGAGTCTCATAGCAAGGGAGTGAAGATGTCTCCACCACCAAAAGAAGACGAAGATAGCGGGGAAGATGAGGAGGAAGAAGAAGACGATGAACAGGGTGCAACATGTGGGGCTTGTGGGGACAACTACGGCAACGACGAATTCTGGATTTGTTGCGATGTGTGCGAAAGATGGTTCCATGGAAAATGCGTGAAGATTACTCCCGCAAAGGCGGAGCATATCAAGCAGTACAAGTGTCCAAGTTGCAGTAACAAGAGGGCAAGGGTTTGA
BLAST of CmoCh16G008140 vs. Swiss-Prot
Match: ALFIN_MEDSA (PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.8e-74
Identity = 136/172 (79.07%), Postives = 150/172 (87.21%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKN+RKRLFQ+INDLP+VFE+ +G  KQS
Sbjct: 86  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNDRKRLFQMINDLPTVFELATGTAKQS 145

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+Q   HNNGS SK     +SRQ ES +KGVKMS P KE+ DSGE EEEE+DDEQGATCG
Sbjct: 146 KDQLTAHNNGSNSKYKSSGKSRQSESQTKGVKMSAPVKEEVDSGE-EEEEDDDEQGATCG 205

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYG DEFWICCD+CE+WFHGKCVKITPAKAEHIKQYKCP CS K+ R+
Sbjct: 206 ACGDNYGTDEFWICCDMCEKWFHGKCVKITPAKAEHIKQYKCPGCSIKKPRI 256

BLAST of CmoCh16G008140 vs. Swiss-Prot
Match: ALFL6_ARATH (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-70
Identity = 137/173 (79.19%), Postives = 151/173 (87.28%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDW+SLVAVHSDSWLL+VAFYFGARFGFGKNERKRLFQ+IN+LP++FEVVSGN KQS
Sbjct: 85  MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNAKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKM-SPPPK-EDEDSGEDEEEEEDDEQGAT 120
           K+ S  +NN SKSK SG  +SRQ ES SK  KM SPPPK E+E+  E E+E EDDEQGA 
Sbjct: 145 KDLS-VNNNNSKSKPSG-VKSRQSESLSKVAKMSSPPPKEEEEEEDESEDESEDDEQGAV 204

Query: 121 CGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRAR 172
           CGACGDNYG DEFWICCD CE+WFHGKCVKITPAKAEHIK YKCP+CSNKRAR
Sbjct: 205 CGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSNKRAR 255

BLAST of CmoCh16G008140 vs. Swiss-Prot
Match: ALFL7_ARATH (PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.0e-70
Identity = 128/169 (75.74%), Postives = 150/169 (88.76%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDW+SLVAVHSDSWL++VAFYFGARFGFGKNERKRLFQ+INDLP++FEVV+GN KQS
Sbjct: 85  MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+QSA HN+ S+SKSSG  + R  ESH+K  KMSPPP+++++SG   +E+EDDEQGA CG
Sbjct: 145 KDQSANHNS-SRSKSSG-GKPRHSESHTKASKMSPPPRKEDESG---DEDEDDEQGAVCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKR 170
           ACGDNYG DEFWICCD CE+WFHGKCVKITPAKAEHIK YKCPSC+  +
Sbjct: 205 ACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCTTSK 248

BLAST of CmoCh16G008140 vs. Swiss-Prot
Match: ALFL8_ORYSI (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica GN=OsI_35671 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-61
Identity = 121/174 (69.54%), Postives = 139/174 (79.89%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGK-Q 60
           M EKDWLSLVAVHSD+WLLAVAFYFGARFGF K  RKRLF +IN+LP+++EVV+G  K Q
Sbjct: 83  MDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINNLPTIYEVVTGTAKKQ 142

Query: 61  SKEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATC 120
           SKE+  T     KS  SG   SRQ E +S+G KM PPPK+++DSG +EEEEE+D +   C
Sbjct: 143 SKEK--TPKTSGKSNKSGTKPSRQPEPNSRGPKM-PPPKDEDDSGGEEEEEEEDHENTLC 202

Query: 121 GACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSC--SNKRAR 172
           GACGDNYG DEFWICCD CE WFHGKCVKITPAKAEHIK YKCP+C  S+KRAR
Sbjct: 203 GACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSSSSKRAR 253

BLAST of CmoCh16G008140 vs. Swiss-Prot
Match: ALFL8_ORYSJ (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica GN=Os11g0244800 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-61
Identity = 121/174 (69.54%), Postives = 139/174 (79.89%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGK-Q 60
           M EKDWLSLVAVHSD+WLLAVAFYFGARFGF K  RKRLF +IN+LP+++EVV+G  K Q
Sbjct: 83  MDEKDWLSLVAVHSDTWLLAVAFYFGARFGFDKESRKRLFSMINNLPTIYEVVTGTAKKQ 142

Query: 61  SKEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATC 120
           SKE+  T     KS  SG   SRQ E +S+G KM PPPK+++DSG +EEEEE+D +   C
Sbjct: 143 SKEK--TPKTSGKSNKSGTKPSRQPEPNSRGPKM-PPPKDEDDSGGEEEEEEEDHENTLC 202

Query: 121 GACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSC--SNKRAR 172
           GACGDNYG DEFWICCD CE WFHGKCVKITPAKAEHIK YKCP+C  S+KRAR
Sbjct: 203 GACGDNYGQDEFWICCDACETWFHGKCVKITPAKAEHIKHYKCPNCSSSSKRAR 253

BLAST of CmoCh16G008140 vs. TrEMBL
Match: A0A0A0L6S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113340 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 2.5e-88
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGK ERKRLFQ+INDLPSVFEVV+GNGKQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           KEQSATHNNGSKSKSSGK  SRQLESHSKGVKMSPPPKEDEDSG++EEEEEDDEQGATCG
Sbjct: 145 KEQSATHNNGSKSKSSGK-MSRQLESHSKGVKMSPPPKEDEDSGDEEEEEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYGNDEFWICCD CERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGNDEFWICCDACERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 255

BLAST of CmoCh16G008140 vs. TrEMBL
Match: F6KVS6_9ROSI (PHD finger family protein OS=Corylus heterophylla PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.2e-80
Identity = 151/172 (87.79%), Postives = 162/172 (94.19%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+INDLP++FEVV+GN KQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNVKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+QSATHN+ SKSK SGKTQSRQ E   KGVKMSPPPKE+++SG  EE+EEDDEQGATCG
Sbjct: 145 KDQSATHNS-SKSKLSGKTQSRQSEPQPKGVKMSPPPKEEDESG--EEDEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYG DEFWICCD+CERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGTDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 253

BLAST of CmoCh16G008140 vs. TrEMBL
Match: M5XFJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010294mg PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-78
Identity = 150/173 (86.71%), Postives = 159/173 (91.91%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+INDLP++FEVV+GN KQ 
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQP 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLE-SHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATC 120
           K+QSA HNN SK+KSSGK QSRQ E   SKGVKMSP PKE+E+SG  EEEEEDDEQGATC
Sbjct: 145 KDQSAPHNNSSKNKSSGKVQSRQSELPQSKGVKMSPLPKEEEESG--EEEEEDDEQGATC 204

Query: 121 GACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           GACGDNYG DEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCP CS+KRARV
Sbjct: 205 GACGDNYGADEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPGCSSKRARV 255

BLAST of CmoCh16G008140 vs. TrEMBL
Match: K9P2Z6_9ROSI (PHD5 OS=Morella rubra PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 5.2e-78
Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+IN+LP++FEVV+GN KQ 
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINELPTIFEVVTGNVKQP 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+QSATHN+ SKSKSSGK  SRQ E  +KGVKMSPPPKE+++SGE  EEEEDDEQGATCG
Sbjct: 145 KDQSATHNS-SKSKSSGKA-SRQTEPQAKGVKMSPPPKEEDESGE--EEEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYG DEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGTDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 252

BLAST of CmoCh16G008140 vs. TrEMBL
Match: A0A0L9TT05_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g318700 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 8.8e-78
Identity = 147/172 (85.47%), Postives = 159/172 (92.44%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+INDLP++FE+V+G+ KQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFELVTGSVKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+Q A HNNGSK KSSGK  SRQ ES +KG+KMS PPKE++DSG  EEEEEDDEQGATCG
Sbjct: 145 KDQPAAHNNGSKFKSSGKV-SRQSESQAKGMKMSAPPKEEDDSG--EEEEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYG DEFWICCD+CERWFHGKCVKITPAKAEHIKQYKCPSCSNKR RV
Sbjct: 205 ACGDNYGTDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRVRV 253

BLAST of CmoCh16G008140 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6)

HSP 1 Score: 267.3 bits (682), Expect = 6.5e-72
Identity = 137/173 (79.19%), Postives = 151/173 (87.28%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDW+SLVAVHSDSWLL+VAFYFGARFGFGKNERKRLFQ+IN+LP++FEVVSGN KQS
Sbjct: 85  MQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNERKRLFQMINELPTIFEVVSGNAKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKM-SPPPK-EDEDSGEDEEEEEDDEQGAT 120
           K+ S  +NN SKSK SG  +SRQ ES SK  KM SPPPK E+E+  E E+E EDDEQGA 
Sbjct: 145 KDLS-VNNNNSKSKPSG-VKSRQSESLSKVAKMSSPPPKEEEEEEDESEDESEDDEQGAV 204

Query: 121 CGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRAR 172
           CGACGDNYG DEFWICCD CE+WFHGKCVKITPAKAEHIK YKCP+CSNKRAR
Sbjct: 205 CGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCSNKRAR 255

BLAST of CmoCh16G008140 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7)

HSP 1 Score: 266.5 bits (680), Expect = 1.1e-71
Identity = 128/169 (75.74%), Postives = 150/169 (88.76%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDW+SLVAVHSDSWL++VAFYFGARFGFGKNERKRLFQ+INDLP++FEVV+GN KQS
Sbjct: 85  MQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+QSA HN+ S+SKSSG  + R  ESH+K  KMSPPP+++++SG   +E+EDDEQGA CG
Sbjct: 145 KDQSANHNS-SRSKSSG-GKPRHSESHTKASKMSPPPRKEDESG---DEDEDDEQGAVCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKR 170
           ACGDNYG DEFWICCD CE+WFHGKCVKITPAKAEHIK YKCPSC+  +
Sbjct: 205 ACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCTTSK 248

BLAST of CmoCh16G008140 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4)

HSP 1 Score: 223.8 bits (569), Expect = 8.2e-59
Identity = 119/175 (68.00%), Postives = 138/175 (78.86%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGK-Q 60
           M EKDWLSLVAVHSD+WLLAVAF+FGARFGF K +RKRLF ++NDLP++FEVV+G  K Q
Sbjct: 85  MAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQ 144

Query: 61  SKEQSATHNNGS-KSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEED-DEQGA 120
            K++S+  NN S +SKSS K  S      SK     P PK+DE+  E+  EEED DEQG 
Sbjct: 145 GKDKSSVSNNSSNRSKSSSKRGSESRAKFSK-----PEPKDDEEEEEEGVEEEDEDEQGE 204

Query: 121 T-CGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRAR 172
           T CGACG++Y  DEFWICCD+CE WFHGKCVKITPA+AEHIKQYKCPSCSNKRAR
Sbjct: 205 TQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 254

BLAST of CmoCh16G008140 vs. TAIR10
Match: AT3G42790.1 (AT3G42790.1 alfin-like 3)

HSP 1 Score: 217.6 bits (553), Expect = 5.9e-57
Identity = 107/171 (62.57%), Postives = 133/171 (77.78%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           + EK+WLSLVA+HSD+WLL+V+FYFG+RF F K ERKRLF +IND+P++FEVV+G  K  
Sbjct: 86  LSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMINDVPTIFEVVTGMAKAK 145

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
            + SA + NG+KSKS+ K ++    S  K  K   P +EDE   E +E++EDD     CG
Sbjct: 146 DKSSAANQNGNKSKSNSKVRT----SEGKSSKTKQPKEEDE---EIDEDDEDDHGETLCG 205

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRAR 172
           ACGD+ G DEFWICCD+CE+WFHGKCVKITPA+AEHIKQYKCPSCSNKRAR
Sbjct: 206 ACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNKRAR 249

BLAST of CmoCh16G008140 vs. TAIR10
Match: AT5G20510.1 (AT5G20510.1 alfin-like 5)

HSP 1 Score: 215.3 bits (547), Expect = 2.9e-56
Identity = 110/176 (62.50%), Postives = 144/176 (81.82%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNG-KQ 60
           MQE++WLSLVAVHSD+WLL+V+FYFG+RFGF + +RKRLF +IN++P+V+EVV+GN  KQ
Sbjct: 86  MQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMINEVPTVYEVVTGNAEKQ 145

Query: 61  SKEQ-SATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKE--DEDSGEDEEEEEDDEQG 120
           +KE  S+ + NG++SKS+ K   R LES S     +   +E  + + GE+EE+E++DE G
Sbjct: 146 TKEMPSSANQNGNRSKSNSKM--RGLESKSSKTIHAKDEEEGLELEEGEEEEDEDEDEHG 205

Query: 121 AT-CGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRAR 172
            T CGACGDNY +DEFWICCD+CE+WFHG+CVKITPA+AEHIK YKCP+CSNKRAR
Sbjct: 206 ETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPARAEHIKHYKCPTCSNKRAR 259

BLAST of CmoCh16G008140 vs. NCBI nr
Match: gi|659102546|ref|XP_008452190.1| (PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 165/172 (95.93%), Postives = 169/172 (98.26%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGK ERKRLFQ+INDLPSVFEVV+GNGKQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           KEQSATHNNGSKSKSSGK  SRQLESHSKGVKMSPPPKEDEDSG++EEEEEDDEQGATCG
Sbjct: 145 KEQSATHNNGSKSKSSGK-MSRQLESHSKGVKMSPPPKEDEDSGDEEEEEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 255

BLAST of CmoCh16G008140 vs. NCBI nr
Match: gi|449431906|ref|XP_004133741.1| (PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 3.6e-88
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGK ERKRLFQ+INDLPSVFEVV+GNGKQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKTERKRLFQMINDLPSVFEVVTGNGKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           KEQSATHNNGSKSKSSGK  SRQLESHSKGVKMSPPPKEDEDSG++EEEEEDDEQGATCG
Sbjct: 145 KEQSATHNNGSKSKSSGK-MSRQLESHSKGVKMSPPPKEDEDSGDEEEEEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYGNDEFWICCD CERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGNDEFWICCDACERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 255

BLAST of CmoCh16G008140 vs. NCBI nr
Match: gi|333696835|gb|AEF79998.1| (PHD finger family protein [Corylus heterophylla])

HSP 1 Score: 305.4 bits (781), Expect = 6.1e-80
Identity = 151/172 (87.79%), Postives = 162/172 (94.19%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+INDLP++FEVV+GN KQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNVKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+QSATHN+ SKSK SGKTQSRQ E   KGVKMSPPPKE+++SG  EE+EEDDEQGATCG
Sbjct: 145 KDQSATHNS-SKSKLSGKTQSRQSEPQPKGVKMSPPPKEEDESG--EEDEEDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYG DEFWICCD+CERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGTDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 253

BLAST of CmoCh16G008140 vs. NCBI nr
Match: gi|1012004365|ref|XP_015940106.1| (PREDICTED: PHD finger protein Alfin1 [Arachis duranensis])

HSP 1 Score: 303.1 bits (775), Expect = 3.0e-79
Identity = 148/172 (86.05%), Postives = 162/172 (94.19%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+INDLP++FE+V+G+ KQS
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEIVTGSAKQS 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLESHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATCG 120
           K+Q A HNNG+KSKSSGK  SRQ E+ +KGVKMS PPKE++DSG  EEEE+DDEQGATCG
Sbjct: 145 KDQPAAHNNGNKSKSSGK-MSRQSENQAKGVKMSAPPKEEDDSG--EEEEDDDEQGATCG 204

Query: 121 ACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           ACGDNYGNDEFWICCD+CERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
Sbjct: 205 ACGDNYGNDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 253

BLAST of CmoCh16G008140 vs. NCBI nr
Match: gi|596200627|ref|XP_007223688.1| (hypothetical protein PRUPE_ppa010294mg [Prunus persica])

HSP 1 Score: 299.7 bits (766), Expect = 3.3e-78
Identity = 150/173 (86.71%), Postives = 159/173 (91.91%), Query Frame = 1

Query: 1   MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQLINDLPSVFEVVSGNGKQS 60
           MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQ+INDLP++FEVV+GN KQ 
Sbjct: 85  MQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNAKQP 144

Query: 61  KEQSATHNNGSKSKSSGKTQSRQLE-SHSKGVKMSPPPKEDEDSGEDEEEEEDDEQGATC 120
           K+QSA HNN SK+KSSGK QSRQ E   SKGVKMSP PKE+E+SG  EEEEEDDEQGATC
Sbjct: 145 KDQSAPHNNSSKNKSSGKVQSRQSELPQSKGVKMSPLPKEEEESG--EEEEEDDEQGATC 204

Query: 121 GACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV 173
           GACGDNYG DEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCP CS+KRARV
Sbjct: 205 GACGDNYGADEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPGCSSKRARV 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ALFIN_MEDSA3.8e-7479.07PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1[more]
ALFL6_ARATH1.1e-7079.19PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1[more]
ALFL7_ARATH2.0e-7075.74PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1 SV=1[more]
ALFL8_ORYSI2.2e-6169.54PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica GN=OsI_35671 PE=3 ... [more]
ALFL8_ORYSJ2.2e-6169.54PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica GN=Os11g0244800 ... [more]
Match NameE-valueIdentityDescription
A0A0A0L6S9_CUCSA2.5e-8895.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113340 PE=4 SV=1[more]
F6KVS6_9ROSI4.2e-8087.79PHD finger family protein OS=Corylus heterophylla PE=2 SV=1[more]
M5XFJ3_PRUPE2.3e-7886.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010294mg PE=4 SV=1[more]
K9P2Z6_9ROSI5.2e-7887.21PHD5 OS=Morella rubra PE=2 SV=1[more]
A0A0L9TT05_PHAAN8.8e-7885.47Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g318700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G02470.16.5e-7279.19 alfin-like 6[more]
AT1G14510.11.1e-7175.74 alfin-like 7[more]
AT5G26210.18.2e-5968.00 alfin-like 4[more]
AT3G42790.15.9e-5762.57 alfin-like 3[more]
AT5G20510.12.9e-5662.50 alfin-like 5[more]
Match NameE-valueIdentityDescription
gi|659102546|ref|XP_008452190.1|1.2e-8895.93PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis melo][more]
gi|449431906|ref|XP_004133741.1|3.6e-8895.35PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis sativus][more]
gi|333696835|gb|AEF79998.1|6.1e-8087.79PHD finger family protein [Corylus heterophylla][more]
gi|1012004365|ref|XP_015940106.1|3.0e-7986.05PREDICTED: PHD finger protein Alfin1 [Arachis duranensis][more]
gi|596200627|ref|XP_007223688.1|3.3e-7886.71hypothetical protein PRUPE_ppa010294mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR011011Znf_FYVE_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR021998Alfin
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0042393 histone binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G008140.1CmoCh16G008140.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 118..166
score: 4.9
IPR011011Zinc finger, FYVE/PHD-typeunknownSSF57903FYVE/PHD zinc fingercoord: 107..169
score: 3.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 111..169
score: 4.9
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 119..165
scor
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 119..167
score: 4.0
IPR019787Zinc finger, PHD-fingerPROFILEPS50016ZF_PHD_2coord: 116..168
score: 9
IPR021998AlfinPFAMPF12165DUF3594coord: 1..54
score: 1.2
NoneNo IPR availablePANTHERPTHR12321CPG BINDING PROTEINcoord: 1..171
score: 4.3E
NoneNo IPR availablePANTHERPTHR12321:SF60PHD FINGER PROTEIN ALFIN-LIKE 6-RELATEDcoord: 1..171
score: 4.3E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G008140CmaCh04G008780Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G008140Cla004564Watermelon (97103) v1cmowmB296
CmoCh16G008140Cp4.1LG01g08840Cucurbita pepo (Zucchini)cmocpeB312
CmoCh16G008140Carg25865Silver-seed gourdcarcmoB0014
The following gene(s) are paralogous to this gene:

None