CmoCh16G008130 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G008130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPHD finger ALFIN-LIKE 7-like protein
LocationCmo_Chr16 : 4203499 .. 4204779 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAAATTGAAAATAAACTGACATTTTCTCTCCCGTTCTTTCTCCCCTTGTTTTTCTGTCTTCAACTCATTGTTACTTACAAAAACCCAACAAACCCTAAAACTGTCCCTTCAATTTTTCTTCTTCATTTCTTCGATTACTAGTTTTATACCTCAATTTCAGCTCTTCCTTCCAAGAAATTTGCAGTTTCAGTATTGAAATTCCTACTGAAATCCCTAATCTTCTCAGTGGGCGGCTCATTTTGGAGAGGAAAATGGAGGGAATGCCGCTCCCAATACCCCGTACAGTGGAGGAGGTCTATGGCGACTTCAAAGGCAGGCGTGCTGGCTTGATTAAAGCCCTAACCACTGGTCTCTTCATCTTTTTTCTTCTTCCTTCCTTCTTCTGCTCATTTTTTATATGTGGAGTCGTTTTTACTATCTTGGTGTTGTTCGTCCTAGATGTAGGTTGACTGTGTAGTTGTTTCTGTACGAATTCTTGCACTTTAATCTTTCTCTTTGTTTTTTTTTTTTTTTTTTTGTGTGTTTTTGCAGATGTTGAGAAGTTTTACCAGCAGTGCGATCCTGGTGGGTTTTCTCTTTCCTCTATTGGTCTCGCTATACCTATTGTTTGTCTGAAATATTTGAACTTATTTCGTTTTTAGAAATTTATTGGTCGCTGTTTTTTAGTTCTTCCGTATGTTTGGGGTCTTGAATTCTGTTNGTTTCCATGGGTCTGAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTCACTTTGATGAAGAATCATAGGCGTGTCTCCATGAAACAAGTATTTCTGCTGAATTGAGTTTATATGTTTTTTATTTGTTGTTCGTTCGCTCGTTCTCCACATCGAACTCGATAATGTTTTTTTCCCTTTTTTGTCGCAAATCTATTCGGTTTGAGATTCACCTGTGCGTAGGATTTTCCCAATGATTGTTTTCACTTTACTTGAAAGTCTAAATTCAGTTTATCGAAGTATTTGGCGGCCTGGGGCTGTGCTAGAACTGGAGATATTTGTGCGTTTTTTTAACCCCTAGGGTAGATCTGGACATAACATTGTAAGTGGTTTGAGTCACTGGCTAAATTTGATACCCTAGTGGATATTCACTATCAAGCTGATGGGGTGGTGCGGTGCCGACACTTGGTCACAAATTTTGAATCTCATAAATAGGAGGTTGGAGAGGGAAAAATACTGCATATATGTCTATCTACTCAACTGGTTGTTTTTGATATTGTTATTACTTTAAGACTGTCTGTTTTTAA

mRNA sequence

AGTAAATTGAAAATAAACTGACATTTTCTCTCCCGTTCTTTCTCCCCTTGTTTTTCTGTCTTCAACTCATTGTTACTTACAAAAACCCAACAAACCCTAAAACTGTCCCTTCAATTTTTCTTCTTCATTTCTTCGATTACTAGTTTTATACCTCAATTTCAGCTCTTCCTTCCAAGAAATTTGCAGTTTCAGTATTGAAATTCCTACTGAAATCCCTAATCTTCTCAGTGGGCGGCTCATTTTGGAGAGGAAAATGGAGGGAATGCCGCTCCCAATACCCCGTACAGTGGAGGAGGTCTATGGCGACTTCAAAGGCAGGCGTGCTGGCTTGATTAAAGCCCTAACCACTGATGTTGAGAAGTTTTACCAGCAGTGCGATCCTGGTGGGTTTTCTCTTTCCTCTATTGGTCTCGCTATACCTATTAATCATAGGCGTGTCTCCATGAAACAAACTGTCTGTTTTTAA

Coding sequence (CDS)

ATGGAGGGAATGCCGCTCCCAATACCCCGTACAGTGGAGGAGGTCTATGGCGACTTCAAAGGCAGGCGTGCTGGCTTGATTAAAGCCCTAACCACTGATGTTGAGAAGTTTTACCAGCAGTGCGATCCTGGTGGGTTTTCTCTTTCCTCTATTGGTCTCGCTATACCTATTAATCATAGGCGTGTCTCCATGAAACAAACTGTCTGTTTTTAA
Homology
[Close]
BLAST of CmoCh16G008130 vs. Swiss-Prot
Match: ALFL7_ARATH (PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.6e-15
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+  PIPRTVEEV+ DF+GRRAGLIKAL+TDV+KFY QCDP   +L   GL
Sbjct: 1  MEGIQHPIPRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. Swiss-Prot
Match: ALFL6_ARATH (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.0e-14
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+  PIPRTVEEV+ DF+GRRAGLIKALT D+ KFYQ CDP   +L   GL
Sbjct: 1  MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. Swiss-Prot
Match: ALFIN_MEDSA (PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 4.5e-13
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 1 

Query: 1  MEGMPL-PIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP 44
          MEGM   P+PRTVEEV+ D+KGRRAGLIKALTTDVEKFYQ  DP
Sbjct: 1  MEGMAQHPVPRTVEEVFSDYKGRRAGLIKALTTDVEKFYQLVDP 44

[Close]
BLAST of CmoCh16G008130 vs. Swiss-Prot
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-11
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1 

Query: 3  GMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          G  L  PRTVEEV+ DFKGRR  ++KALTTDV++FYQQCDP   +L   GL
Sbjct: 4  GAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGL 54

[Close]
BLAST of CmoCh16G008130 vs. Swiss-Prot
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-11
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 

Query: 9  PRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP 44
          PRTVEEV+ DFKGRRAG+I+ALTTDVE F+QQCDP
Sbjct: 10 PRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDP 44

[Close]
BLAST of CmoCh16G008130 vs. TrEMBL
Match: A0A0A0L6S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113340 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-17
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEGMP PIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP   +L   GL
Sbjct: 1  MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TrEMBL
Match: A0A0B0N5K7_GOSAR (PHD finger ALFIN-LIKE 7-like protein OS=Gossypium arboreum GN=F383_16385 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEGMP PIPRTVEEV+ DFKGRR+GLIKALTTDV+KFYQQCDP   +L   GL
Sbjct: 1  MEGMPHPIPRTVEEVFNDFKGRRSGLIKALTTDVDKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TrEMBL
Match: A0A0D2UNM4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G168100 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+P PIPRTVEEV+ DFKGRRAGLIKALTTDV+KFYQQCDP   +L   GL
Sbjct: 1  MEGIPHPIPRTVEEVFNDFKGRRAGLIKALTTDVDKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TrEMBL
Match: A0A0B0PSJ0_GOSAR (PHD finger Alfin1 OS=Gossypium arboreum GN=F383_03915 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+P PIPRTVEEV+ DFKGRRAGLIKALTTDV+KFYQQCDP   +L   GL
Sbjct: 1  MEGIPHPIPRTVEEVFNDFKGRRAGLIKALTTDVDKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TrEMBL
Match: A0A0D2TLA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G168100 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+P PIPRTVEEV+ DFKGRRAGLIKALTTDV+KFYQQCDP   +L   GL
Sbjct: 1  MEGIPHPIPRTVEEVFNDFKGRRAGLIKALTTDVDKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7)

HSP 1 Score: 81.6 bits (200), Expect = 2.1e-16
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+  PIPRTVEEV+ DF+GRRAGLIKAL+TDV+KFY QCDP   +L   GL
Sbjct: 1  MEGIQHPIPRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-15
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+  PIPRTVEEV+ DF+GRRAGLIKALT D+ KFYQ CDP   +L   GL
Sbjct: 1  MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. TAIR10
Match: AT3G42790.1 (AT3G42790.1 alfin-like 3)

HSP 1 Score: 70.1 bits (170), Expect = 6.2e-13
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1 

Query: 3  GMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          G  L  PRTVEEV+ DFKGRR  ++KALTTDV++FYQQCDP   +L   GL
Sbjct: 4  GAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGL 54

[Close]
BLAST of CmoCh16G008130 vs. TAIR10
Match: AT5G20510.1 (AT5G20510.1 alfin-like 5)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-12
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 

Query: 9  PRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP 44
          PRTVEEV+ DFKGRRAG+I+ALTTDVE F+QQCDP
Sbjct: 10 PRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDP 44

[Close]
BLAST of CmoCh16G008130 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-11
Identity = 27/35 (77.14%), Postives = 33/35 (94.29%), Query Frame = 1 

Query: 9  PRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP 44
          PRTVEEV+ DFKGRRAG+IKALTTDV++F++ CDP
Sbjct: 9  PRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDP 43

[Close]
BLAST of CmoCh16G008130 vs. NCBI nr
Match: gi|449431906|ref|XP_004133741.1| (PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-17
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEGMP PIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP   +L   GL
Sbjct: 1  MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. NCBI nr
Match: gi|659102546|ref|XP_008452190.1| (PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-17
Identity = 45/53 (84.91%), Postives = 46/53 (86.79%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEGMP PIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDP   +L   GL
Sbjct: 1  MEGMPHPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. NCBI nr
Match: gi|747089230|ref|XP_011092243.1| (PREDICTED: PHD finger protein Alfin1-like [Sesamum indicum])

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-15
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG P PIPRTVEEV+ DFKGRRAGLIKALTTDVEKFYQQCDP   +L   GL
Sbjct: 1  MEGTPHPIPRTVEEVFNDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. NCBI nr
Match: gi|728830290|gb|KHG09733.1| (PHD finger ALFIN-LIKE 7 -like protein [Gossypium arboreum])

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEGMP PIPRTVEEV+ DFKGRR+GLIKALTTDV+KFYQQCDP   +L   GL
Sbjct: 1  MEGMPHPIPRTVEEVFNDFKGRRSGLIKALTTDVDKFYQQCDPEKENLCLYGL 53

[Close]
BLAST of CmoCh16G008130 vs. NCBI nr
Match: gi|823225085|ref|XP_012445333.1| (PREDICTED: PHD finger protein ALFIN-LIKE 7-like [Gossypium raimondii])

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = 1 

Query: 1  MEGMPLPIPRTVEEVYGDFKGRRAGLIKALTTDVEKFYQQCDPGGFSLSSIGL 54
          MEG+P PIPRTVEEV+ DFKGRRAGLIKALTTDV+KFYQQCDP   +L   GL
Sbjct: 1  MEGIPHPIPRTVEEVFNDFKGRRAGLIKALTTDVDKFYQQCDPEKENLCLYGL 53

The following BLAST results are available for this feature:
BLAST of CmoCh16G008130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALFL7_ARATH3.6e-1569.81PHD finger protein ALFIN-LIKE 7 OS=Arabidopsis thaliana GN=AL7 PE=1 SV=1[more]
ALFL6_ARATH4.0e-1467.92PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana GN=AL6 PE=2 SV=1[more]
ALFIN_MEDSA4.5e-1379.55PHD finger protein Alfin1 OS=Medicago sativa GN=ALFIN-1 PE=1 SV=1[more]
ALFL3_ARATH1.1e-1162.75PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1[more]
ALFL5_ARATH2.4e-1182.86PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1[more]
BLAST of CmoCh16G008130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6S9_CUCSA2.1e-1784.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G113340 PE=4 SV=1[more]
A0A0B0N5K7_GOSAR1.5e-1577.36PHD finger ALFIN-LIKE 7-like protein OS=Gossypium arboreum GN=F383_16385 PE=4 SV... [more]
A0A0D2UNM4_GOSRA1.9e-1577.36Uncharacterized protein OS=Gossypium raimondii GN=B456_009G168100 PE=4 SV=1[more]
A0A0B0PSJ0_GOSAR1.9e-1577.36PHD finger Alfin1 OS=Gossypium arboreum GN=F383_03915 PE=4 SV=1[more]
A0A0D2TLA9_GOSRA1.9e-1577.36Uncharacterized protein OS=Gossypium raimondii GN=B456_009G168100 PE=4 SV=1[more]
BLAST of CmoCh16G008130 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14510.12.1e-1669.81 alfin-like 7[more]
AT2G02470.12.3e-1567.92 alfin-like 6[more]
AT3G42790.16.2e-1362.75 alfin-like 3[more]
AT5G20510.11.4e-1282.86 alfin-like 5[more]
AT5G26210.11.2e-1177.14 alfin-like 4[more]
BLAST of CmoCh16G008130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431906|ref|XP_004133741.1|3.0e-1784.91PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis sativus][more]
gi|659102546|ref|XP_008452190.1|3.0e-1784.91PREDICTED: PHD finger protein ALFIN-LIKE 7 [Cucumis melo][more]
gi|747089230|ref|XP_011092243.1|2.1e-1579.25PREDICTED: PHD finger protein Alfin1-like [Sesamum indicum][more]
gi|728830290|gb|KHG09733.1|2.1e-1577.36PHD finger ALFIN-LIKE 7 -like protein [Gossypium arboreum][more]
gi|823225085|ref|XP_012445333.1|2.8e-1577.36PREDICTED: PHD finger protein ALFIN-LIKE 7-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021998Alfin
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0042393 histone binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G008130.1CmoCh16G008130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021998AlfinPFAMPF12165DUF3594coord: 11..48
score: 3.5
NoneNo IPR availablePANTHERPTHR12321CPG BINDING PROTEINcoord: 1..43
score: 1.9
NoneNo IPR availablePANTHERPTHR12321:SF60PHD FINGER PROTEIN ALFIN-LIKE 6-RELATEDcoord: 1..43
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G008130Lsi05G007690Bottle gourd (USVL1VR-Ls)cmolsiB305
CmoCh16G008130Cp4.1LG14g00710Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G008130Cp4.1LG01g08860Cucurbita pepo (Zucchini)cmocpeB312
CmoCh16G008130CsaV3_3G006760Cucumber (Chinese Long) v3cmocucB0380
CmoCh16G008130Cla97C10G191260Watermelon (97103) v2cmowmbB322
CmoCh16G008130Bhi11G000807Wax gourdcmowgoB0407
CmoCh16G008130CsGy3G006740Cucumber (Gy14) v2cgybcmoB313
CmoCh16G008130Carg05869Silver-seed gourdcarcmoB1366
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G008130CmoCh04G009390Cucurbita moschata (Rifu)cmocmoB285
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G008130Bottle gourd (USVL1VR-Ls)cmolsiB302
CmoCh16G008130Melon (DHL92) v3.6.1cmomedB333
CmoCh16G008130Silver-seed gourdcarcmoB0014
CmoCh16G008130Wax gourdcmowgoB0421
CmoCh16G008130Cucumber (Gy14) v1cgycmoB0705
CmoCh16G008130Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G008130Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G008130Wild cucumber (PI 183967)cmocpiB326
CmoCh16G008130Cucumber (Chinese Long) v2cmocuB318
CmoCh16G008130Melon (DHL92) v3.5.1cmomeB285
CmoCh16G008130Watermelon (Charleston Gray)cmowcgB278
CmoCh16G008130Watermelon (97103) v1cmowmB296