CmoCh16G006450 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G006450
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Hydroxyproline-rich glycoprotein family protein
Location	Cmo_Chr16 : 3181069 .. 3181945 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTCTCCTGATGGGCCTTCCTCCATTTTTGCCATTGGCCCATTTGCTCATGAAACACAGCTTGTCTCCACCTTTGAATCAACTGCTCCCTTCACTCCTGAGTCTACCCACTTGATTAGGCCTTCTTCCCCTGAAGTTCCTTTTGCTCAGGTTCTTCTACCTAGCCTACAGAAAGCTGAGTCTGATAATCAATGTTCATTTCCTAATGATTACTTCCAATCTTACCAATTCTATCCTTGCAGCCCGATTAGTCACCTCATATCGCCACGGCCAGTCATTTCTCGTTCTGGGTCGTCATCGCGTTTGCCTGATTGTGATTTTGCTTCCTCTGGCTCGCAGTTTTCGAATTTCCCATTAGAAGTTCCACCTACATTATTGGACCTTGACAAATGTTCCACTTATAGCTGGCAACAACGGCGAAGCACTGATTCTTACTCTCAAGATTCTATAGGATTCAAATCAAGTAATGATTTTGTTTTGAATCCCCAAATTTCAGAATCTATGTCAGATCACCACGCAACAAATGAATCCCAAAATATTCGAATTCTCATTGATGGAAGCCGAAAGGAGGAAGCCTGTTGCTGCTAATCATAGATTCTCATTTGAGTTATCTGATGCAGATGCTTTATTAAGAAGCGTAGGAAGTAAGCCGCTGGAATCAAATGAACTGGAAGTTGCATCATCTCAATTACATGAACCATTTGAAACGGCTAAAGAAAATTCTCCTGCTGTCTGTCATACCTCAAATGGTACAGAAGAATATGCAAAAACAAACGGTGAACATGCACATCAGCATCAAGAACACCACTCCCTTACCCTTGGGTTTGTGAAGGAATTCAATTTTGATCATGGCAATGGATGTGATACTCTTTAA

mRNA sequence

ATGTGTTCTCCTGATGGGCCTTCCTCCATTTTTGCCATTGGCCCATTTGCTCATGAAACACAGCTTGTCTCCACCTTTGAATCAACTGCTCCCTTCACTCCTGAGTCTACCCACTTGATTAGGCCTTCTTCCCCTGAAGTTCCTTTTGCTCAGGTTCTTCTACCTAGCCTACAGAAAGCTGAGTCTGATAATCAATGTTCATTTCCTAATGATTACTTCCAATCTTACCAATTCTATCCTTGCAGCCCGATTAGTCACCTCATATCGCCACGGCCAGTCATTTCTCGTTCTGGGTCGTCATCGCGTTTGCCTGATTGTGATTTTGCTTCCTCTGGCTCGCAGTTTTCGAATTTCCCATTAGAAGTTCCACCTACATTATTGGACCTTGACAAATGTTCCACTTATAGCTGGCAACAACGGCGAAGCACTGATTCTTACTCTCAAGATTCTATAGGATTCAAATCAACCGAAAGGAGGAAGCCTGTTGCTGCTAATCATAGATTCTCATTTGAGTTATCTGATGCAGATGCTTTATTAAGAAGCGTAGGAAGTAAGCCGCTGGAATCAAATGAACTGGAAGTTGCATCATCTCAATTACATGAACCATTTGAAACGGCTAAAGAAAATTCTCCTGCTGTCTGTCATACCTCAAATGGTACAGAAGAATATGCAAAAACAAACGGTGAACATGCACATCAGCATCAAGAACACCACTCCCTTACCCTTGGGTTTGTGAAGGAATTCAATTTTGATCATGGCAATGGATGTGATACTCTTTAA

Coding sequence (CDS)

ATGTGTTCTCCTGATGGGCCTTCCTCCATTTTTGCCATTGGCCCATTTGCTCATGAAACACAGCTTGTCTCCACCTTTGAATCAACTGCTCCCTTCACTCCTGAGTCTACCCACTTGATTAGGCCTTCTTCCCCTGAAGTTCCTTTTGCTCAGGTTCTTCTACCTAGCCTACAGAAAGCTGAGTCTGATAATCAATGTTCATTTCCTAATGATTACTTCCAATCTTACCAATTCTATCCTTGCAGCCCGATTAGTCACCTCATATCGCCACGGCCAGTCATTTCTCGTTCTGGGTCGTCATCGCGTTTGCCTGATTGTGATTTTGCTTCCTCTGGCTCGCAGTTTTCGAATTTCCCATTAGAAGTTCCACCTACATTATTGGACCTTGACAAATGTTCCACTTATAGCTGGCAACAACGGCGAAGCACTGATTCTTACTCTCAAGATTCTATAGGATTCAAATCAACCGAAAGGAGGAAGCCTGTTGCTGCTAATCATAGATTCTCATTTGAGTTATCTGATGCAGATGCTTTATTAAGAAGCGTAGGAAGTAAGCCGCTGGAATCAAATGAACTGGAAGTTGCATCATCTCAATTACATGAACCATTTGAAACGGCTAAAGAAAATTCTCCTGCTGTCTGTCATACCTCAAATGGTACAGAAGAATATGCAAAAACAAACGGTGAACATGCACATCAGCATCAAGAACACCACTCCCTTACCCTTGGGTTTGTGAAGGAATTCAATTTTGATCATGGCAATGGATGTGATACTCTTTAA

Homology

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BLAST of CmoCh16G006450 vs. TrEMBL
Match: A0A0A0KY57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047980 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 171/304 (56.25%), Postives = 194/304 (63.82%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP-ESTHLIRPSSPEVPFAQ 60
           M SPDGPSSIFAIGPFAHE QLVS        T E + PFTP ES HL  PSSPEVPFAQ
Sbjct: 17  MYSPDGPSSIFAIGPFAHEPQLVSPPLNFSTLTTEPSTPFTPPESIHLTTPSSPEVPFAQ 76

Query: 61  VLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFASS 120
            + P+L K ESDNQ +FPND FQSYQFYP SP+SHLISPR VISRSG+SS LPD DFAS 
Sbjct: 77  FVQPTLPKVESDNQYTFPNDDFQSYQFYPGSPVSHLISPRSVISRSGASSPLPDYDFASF 136

Query: 121 GSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTERRKPVAANHRFSFE 180
           GSQF NFPLEVPPTLL+LDK S ++W+QR+STDS +QDSI FKS+        N + S  
Sbjct: 137 GSQFLNFPLEVPPTLLNLDKHSIHNWRQRQSTDSCTQDSIEFKSS---NDFVLNPQTSES 196

Query: 181 LSDADA--------LLRSVGSK----PLESNE------------LEVASSQLHEPFETA- 240
           +SD  A        +L   GSK    P  +N             L+   S+  E  E A 
Sbjct: 197 MSDHHATNESQNIQILIDDGSKKEEEPGATNHRFSFELSDGDVLLQSVGSKPLESNELAV 256

Query: 241 ------------KENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGN 259
                       KENSP   HTSN  EE  K +G+ AHQ QEHHS+TLG VKEFNFD+GN
Sbjct: 257 ESSPIHEPFETTKENSPHGDHTSNVIEEKTKADGDEAHQRQEHHSVTLGSVKEFNFDNGN 316

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BLAST of CmoCh16G006450 vs. TrEMBL
Match: B9RCD8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1687100 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.9e-45
Identity = 128/291 (43.99%), Postives = 163/291 (56.01%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP--ESTHLIRPSSPEVPFA 60
           M SP GP+SIFAIGP+AHETQLVS        T  STAPFTP  ES  L  PSSPEVPFA
Sbjct: 132 MYSPSGPASIFAIGPYAHETQLVSPPAFSTFTTEPSTAPFTPPPESVQLTTPSSPEVPFA 191

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q+L PS +  E+  +  F N  FQSYQFYP SP+  LISP   IS SG+SS  PD +FA+
Sbjct: 192 QLLEPSNRNGEAGLRFPFSNYEFQSYQFYPGSPVGQLISPSSGISGSGTSSPFPDGEFAA 251

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKS--------------- 180
           +G +F  F + VPP LL+LDK S +    R+ + + + D++   S               
Sbjct: 252 AGPRFLEFQMAVPPKLLNLDKLSVHECGSRQGSGTLTPDAVRATSCSFPLDRQCSDIASN 311

Query: 181 ----TERRKPVAANHRFSFELSDADALLRSVGSKPL-------ESNELEVASSQLHEPFE 240
                E +    A+ R SF+LS  DA LR    KP        ES + E+A+ ++ +  E
Sbjct: 312 RHSDNENKDDQVADLRVSFDLSAEDA-LRYAEPKPASPVKIMPESMKNEIAAEKVQKSSE 371

Query: 241 TAKENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGNG 256
                   V  TSNG  E A T GE   +HQ+H +LTLG  KEFNFD+ +G
Sbjct: 372 IRHNFECRVGETSNGILEQASTGGEKTPRHQKHRTLTLGTFKEFNFDNADG 421

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BLAST of CmoCh16G006450 vs. TrEMBL
Match: M5WM36_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005552mg PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 8.2e-43
Identity = 128/298 (42.95%), Postives = 160/298 (53.69%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP--ESTHLIRPSSPEVPFA 60
           M SP GP+SIFAIGP+AHETQLVS        T  STAPFTP  ES HL  PSSPEVPFA
Sbjct: 125 MYSPSGPTSIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSSPEVPFA 184

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q+L P  +  E   +    +  FQSYQ YP SP+  LISP   IS SG+SS  PD +FA+
Sbjct: 185 QLLDPHFRNGEGGQRFPLSHYEFQSYQLYPGSPVGQLISPSSGISGSGTSSPFPDLEFAA 244

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTE------------- 180
            G  F  F    PP LL+LD  ST  W  R  + S + D  G KST              
Sbjct: 245 RGHHFLEFRTGDPPKLLNLDILSTRDWGSRLGSGSVTPD--GAKSTSSDGFLLKPQTPEV 304

Query: 181 ----------RRKPVAANHRFSFELSDADALLRSVGSKPLESNELEVASSQLHEPFET-- 240
                     R   ++ NHR SFELS ++ ++R V  KP+   E    S +  E  ++  
Sbjct: 305 VLNPRSNNRGRNNDISINHRVSFELS-SEEVIRCVEKKPVALAEAVSTSLEDTEKAQSKE 364

Query: 241 --AKENSPAVC---HTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGNGCDT 259
             +K  S ++C    TSN   E A  +GE A  H +  S+TLG VKEFNFD+ +G D+
Sbjct: 365 DPSKVVSSSICPVGETSNDAAEKAVADGEEAQLHPKQRSITLGSVKEFNFDNPDGGDS 419

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BLAST of CmoCh16G006450 vs. TrEMBL
Match: A0A067JZI1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20571 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-41
Identity = 124/295 (42.03%), Postives = 162/295 (54.92%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP--ESTHLIRPSSPEVPFA 60
           M SP GPSSIFAIGP+AHETQLVS        T  STAPFTP  ES HL  PSSPEVPFA
Sbjct: 128 MYSPSGPSSIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSSPEVPFA 187

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q+L PS++  E+  +    N  FQSYQ YP SP+  LISP   IS SG+SS  PD +FA+
Sbjct: 188 QLLDPSIRNVEAGLRFPLSNYEFQSYQLYPGSPVGQLISPSSGISGSGTSSPFPDGEFAA 247

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTE------------- 180
               F  F +  PP LL+LDK ST+ W  R  + + + D++   S               
Sbjct: 248 G---FLEFRMGEPPKLLNLDKLSTHEWGSRCGSGTLTPDAVRPTSCSFTPDRPFSDFVSH 307

Query: 181 ------RRKPVAANHRFSFELSDADALLRSVGSKPL-------ESNELEVASSQLHEPFE 240
                  +     +HR SFEL+ A+ +L      P        +S E    +++  +  E
Sbjct: 308 KHSDNGNQNDEVGDHRLSFELA-AEGVLGCEEQNPASPVKIIGDSLENGTVAARTEDSTE 367

Query: 241 TAKENSPAVCHTSNGTEEYAKTNGEHA-HQHQEHHSLTLGFVKEFNFDHGNGCDT 259
              +    V  TSNGT E A T+GE A  +H++H S+TLG +KEFNFD+ +G D+
Sbjct: 368 VVDDFESRVGETSNGTPEKASTDGEKAPPRHEKHRSITLGSLKEFNFDNVDGGDS 418

[Close]

BLAST of CmoCh16G006450 vs. TrEMBL
Match: W9QH33_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024256 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-40
Identity = 125/291 (42.96%), Postives = 158/291 (54.30%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP--ESTHLIRPSSPEVPFA 60
           M SP GP+SIFAIGP+AHETQLVS        T  STAPFTP  ES HL  PSSPEVPFA
Sbjct: 130 MYSPGGPASIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSSPEVPFA 189

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q+L P++   E   +    ++ FQSY F P SPI  LISP   IS SG+SS  PD +FA+
Sbjct: 190 QLLDPNIHNGEPGQRFPIFHNEFQSYYFQPGSPIGQLISPSSGISGSGTSSPFPDPEFAA 249

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSI----GFKSTERRKP----- 180
            G  F  F    PP LL+LDK S + W  R+ + S + DS+     F+     KP     
Sbjct: 250 RGPHFLEFRTGDPPKLLNLDKLSKFDWGSRQGSGSLTPDSVKPISTFEVAPHLKPNGRCR 309

Query: 181 ---VAANHRFSFELSDADALLRSVGSKPLESNELEVAS------------SQLHEPFETA 240
                A+ R SF++S  D ++R V  K +   E  + S            S  ++  E  
Sbjct: 310 NAENVADRRVSFDVSTED-VIRYVEKKTVPLAEAMLTSLKDTTMGQREENSDSNKVEEIG 369

Query: 241 KENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGNGCD 258
            EN   V  TSN   + A T+GE   QHQ+H S+TLG  KEFNFD+ +  D
Sbjct: 370 CEN--RVGETSNEEPDKAPTSGEEVLQHQKHRSITLGSSKEFNFDNADAGD 417

[Close]

BLAST of CmoCh16G006450 vs. TAIR10
Match: AT5G52430.1 (AT5G52430.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16
Identity = 64/161 (39.75%), Postives = 81/161 (50.31%), Query Frame = 1


Query: 3   SPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP---ESTHLIRPSSPEVPFAQ 62
           SP  P S+F +GP+A+ETQ V+        T  STAP+TP    S H+  PSSPEVPFAQ
Sbjct: 121 SPKEPQSVFTVGPYANETQPVTPPVFSAFITEPSTAPYTPPPESSVHITTPSSPEVPFAQ 180

Query: 63  VLLPSLQKAESD-----NQCSFPNDY-FQSYQFYPCSP-ISHLISPRPVISRSGSSSRLP 122
           +L  SL+    D     NQ    + Y F+S Q  P SP   +LISP  VIS SG+SS  P
Sbjct: 181 LLTSSLELTRRDSTSGMNQKFSSSHYEFRSNQVCPGSPGGGNLISPGSVISNSGTSSPYP 240

Query: 123 DCDFASSGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDS 146
                   S    F +  PP  L  +  +   W  R  + S
Sbjct: 241 ------GKSPMVEFRIGEPPKFLGFEHFTARKWGSRFGSGS 275

[Close]

BLAST of CmoCh16G006450 vs. TAIR10
Match: AT1G63720.1 (AT1G63720.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1))

HSP 1 Score: 72.8 bits (177), Expect = 3.5e-13
Identity = 79/246 (32.11%), Postives = 107/246 (43.50%), Query Frame = 1


Query: 9   SIFAIGPFAHETQLVS--------TFESTAPFTP----ESTHL--IRPSSPEVPFAQVLL 68
           SIFAIGP+AHETQLVS        T  S+AP TP     S +L    PSSPEVPFAQ+  
Sbjct: 130 SIFAIGPYAHETQLVSPPVFSTYTTEPSSAPITPPLDDSSIYLTTTTPSSPEVPFAQLFN 189

Query: 69  PSLQKAESDNQCSFPNDY-FQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFASSGS 128
            + Q      +    + Y FQ YQ  P SP+  LISP P    SG +S  PD       S
Sbjct: 190 SNHQTGSYGYKFPMSSSYEFQFYQLPPGSPLGQLISPSP---GSGPTSPFPD----GETS 249

Query: 129 QFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTERRKPVAANHR-FSFEL 188
            F +F +  PP LL                   S  + G  +  + + +   H+  SF+L
Sbjct: 250 LFPHFQVSDPPKLL-------------------SPKTAGVTTPCKEQKIVRPHKPVSFDL 309

Query: 189 SDADALLRSVGSKPLESNELEVASSQLHEPFETAKENSPAVCHTSNGTEEYAKTNGEHAH 239
            DAD ++R V  K             L   F  A  +  ++ H+S G+ +      +  H
Sbjct: 310 -DADHVIRCVDQK-------------LRTTFPEASSDQESMNHSSLGSNKEFNFGTDEKH 335

[Close]

BLAST of CmoCh16G006450 vs. TAIR10
Match: AT4G25620.1 (AT4G25620.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.6e-11
Identity = 92/302 (30.46%), Postives = 128/302 (42.38%), Query Frame = 1


Query: 7   PSSIFAIGPFAHETQLVS--------TFESTAPFTPESTHLIRPSSPEVPFAQVLLPSLQ 66
           P S F IGP+AHETQ V+        T  STAPFTP       PSSPEVPFAQ+L  SL+
Sbjct: 122 PPSAFTIGPYAHETQPVTPPVFSAFTTEPSTAPFTPPPES---PSSPEVPFAQLLTSSLE 181

Query: 67  KAESDN------QCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFASSG 126
           +A  ++      + S  +  F+S Q YP SP  +LISP      SG+SS  P        
Sbjct: 182 RARRNSGGGMNQKFSAAHYEFKSCQVYPGSPGGNLISP-----GSGTSSPYP------GK 241

Query: 127 SQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTERRKPVAANHRFSFEL 186
                F +  PP  L  +  +   W  R  + S +    G +          +   S  +
Sbjct: 242 CSIIEFRIGEPPKFLGFEHFTARKWGSRFGSGSITPAGQGSRLGSGALTPDGSKLTSGVV 301

Query: 187 --SDADALLR-SVGS-KPLESNEL-----EVAS-------SQLHE----------PFE-T 246
             + A+ ++R S G+  PLE + L     EVAS       S  H            FE T
Sbjct: 302 TPNGAETVIRMSYGNLTPLEGSLLDSQISEVASLANSDHGSSRHNDEALVVPHRVSFELT 361

Query: 247 AKENSPAVCHTSNGTEEYAKTNGEH-------------AHQHQEHHSLTLGFVKEFNFDH 255
            ++ +  +    N +  + K +GEH             + Q Q+  S + G  KEF FD 
Sbjct: 362 GEDVARCLASKLNRSGSHEKASGEHLRPNCCKTSGETESEQSQKLRSFSTGSNKEFKFDS 409

[Close]

BLAST of CmoCh16G006450 vs. NCBI nr
Match: gi|659102256|ref|XP_008452033.1| (PREDICTED: uncharacterized protein LOC103493162 isoform X2 [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 2.6e-74
Identity = 175/303 (57.76%), Postives = 195/303 (64.36%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS---------TFESTAPFTP-ESTHLIRPSSPEVPFA 60
           M SPDGPSSIFAIGPFAHE QLVS         T  ST PFTP ES HL  PSSPEVPFA
Sbjct: 128 MYSPDGPSSIFAIGPFAHEPQLVSPPLNFSTLTTEPSTPPFTPPESIHLTTPSSPEVPFA 187

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q + PSLQK ESDNQ +FPND FQSYQFYP SP+SHLISPR VISRSG+SS LPD DFAS
Sbjct: 188 QFVPPSLQKVESDNQYTFPNDDFQSYQFYPGSPVSHLISPRSVISRSGASSPLPDYDFAS 247

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTE------RRKPVAA 180
            GSQF NFPLEVPPTL +LDK S ++W+QR+STDS +QDSI FKS+              
Sbjct: 248 FGSQFLNFPLEVPPTLSNLDKHSIHNWRQRQSTDSCTQDSIEFKSSNDFVLNPHTSESMC 307

Query: 181 NHRFSFELSDADALLRSVGSKPLE------------------------SNELE-----VA 240
           +H  + E  +   L+   GSK  E                        S  LE     V 
Sbjct: 308 DHHATNESQNIQILIDD-GSKREEEPGATNHRFSFELSDGDVLSQSVGSKPLESNELPVE 367

Query: 241 SSQLHEPFETAKENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGNG 259
           SS +HEPFET KENSP   HTSN  EE  K +G+ AHQHQEHHS+ LG VKEFNFD+ NG
Sbjct: 368 SSPIHEPFETTKENSPHGDHTSNVIEEKTKADGDEAHQHQEHHSVALGSVKEFNFDNRNG 427

[Close]

BLAST of CmoCh16G006450 vs. NCBI nr
Match: gi|659102254|ref|XP_008452032.1| (PREDICTED: uncharacterized protein LOC103493162 isoform X1 [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 2.6e-74
Identity = 175/303 (57.76%), Postives = 195/303 (64.36%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS---------TFESTAPFTP-ESTHLIRPSSPEVPFA 60
           M SPDGPSSIFAIGPFAHE QLVS         T  ST PFTP ES HL  PSSPEVPFA
Sbjct: 129 MYSPDGPSSIFAIGPFAHEPQLVSPPLNFSTLTTEPSTPPFTPPESIHLTTPSSPEVPFA 188

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q + PSLQK ESDNQ +FPND FQSYQFYP SP+SHLISPR VISRSG+SS LPD DFAS
Sbjct: 189 QFVPPSLQKVESDNQYTFPNDDFQSYQFYPGSPVSHLISPRSVISRSGASSPLPDYDFAS 248

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTE------RRKPVAA 180
            GSQF NFPLEVPPTL +LDK S ++W+QR+STDS +QDSI FKS+              
Sbjct: 249 FGSQFLNFPLEVPPTLSNLDKHSIHNWRQRQSTDSCTQDSIEFKSSNDFVLNPHTSESMC 308

Query: 181 NHRFSFELSDADALLRSVGSKPLE------------------------SNELE-----VA 240
           +H  + E  +   L+   GSK  E                        S  LE     V 
Sbjct: 309 DHHATNESQNIQILIDD-GSKREEEPGATNHRFSFELSDGDVLSQSVGSKPLESNELPVE 368

Query: 241 SSQLHEPFETAKENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGNG 259
           SS +HEPFET KENSP   HTSN  EE  K +G+ AHQHQEHHS+ LG VKEFNFD+ NG
Sbjct: 369 SSPIHEPFETTKENSPHGDHTSNVIEEKTKADGDEAHQHQEHHSVALGSVKEFNFDNRNG 428

[Close]

BLAST of CmoCh16G006450 vs. NCBI nr
Match: gi|449457656|ref|XP_004146564.1| (PREDICTED: uncharacterized protein LOC101220378 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.9e-69
Identity = 171/304 (56.25%), Postives = 194/304 (63.82%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP-ESTHLIRPSSPEVPFAQ 60
           M SPDGPSSIFAIGPFAHE QLVS        T E + PFTP ES HL  PSSPEVPFAQ
Sbjct: 129 MYSPDGPSSIFAIGPFAHEPQLVSPPLNFSTLTTEPSTPFTPPESIHLTTPSSPEVPFAQ 188

Query: 61  VLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFASS 120
            + P+L K ESDNQ +FPND FQSYQFYP SP+SHLISPR VISRSG+SS LPD DFAS 
Sbjct: 189 FVQPTLPKVESDNQYTFPNDDFQSYQFYPGSPVSHLISPRSVISRSGASSPLPDYDFASF 248

Query: 121 GSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTERRKPVAANHRFSFE 180
           GSQF NFPLEVPPTLL+LDK S ++W+QR+STDS +QDSI FKS+        N + S  
Sbjct: 249 GSQFLNFPLEVPPTLLNLDKHSIHNWRQRQSTDSCTQDSIEFKSS---NDFVLNPQTSES 308

Query: 181 LSDADA--------LLRSVGSK----PLESNE------------LEVASSQLHEPFETA- 240
           +SD  A        +L   GSK    P  +N             L+   S+  E  E A 
Sbjct: 309 MSDHHATNESQNIQILIDDGSKKEEEPGATNHRFSFELSDGDVLLQSVGSKPLESNELAV 368

Query: 241 ------------KENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGN 259
                       KENSP   HTSN  EE  K +G+ AHQ QEHHS+TLG VKEFNFD+GN
Sbjct: 369 ESSPIHEPFETTKENSPHGDHTSNVIEEKTKADGDEAHQRQEHHSVTLGSVKEFNFDNGN 428

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BLAST of CmoCh16G006450 vs. NCBI nr
Match: gi|700198179|gb|KGN53337.1| (hypothetical protein Csa_4G047980 [Cucumis sativus])

HSP 1 Score: 271.2 bits (692), Expect = 1.9e-69
Identity = 171/304 (56.25%), Postives = 194/304 (63.82%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP-ESTHLIRPSSPEVPFAQ 60
           M SPDGPSSIFAIGPFAHE QLVS        T E + PFTP ES HL  PSSPEVPFAQ
Sbjct: 17  MYSPDGPSSIFAIGPFAHEPQLVSPPLNFSTLTTEPSTPFTPPESIHLTTPSSPEVPFAQ 76

Query: 61  VLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFASS 120
            + P+L K ESDNQ +FPND FQSYQFYP SP+SHLISPR VISRSG+SS LPD DFAS 
Sbjct: 77  FVQPTLPKVESDNQYTFPNDDFQSYQFYPGSPVSHLISPRSVISRSGASSPLPDYDFASF 136

Query: 121 GSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKSTERRKPVAANHRFSFE 180
           GSQF NFPLEVPPTLL+LDK S ++W+QR+STDS +QDSI FKS+        N + S  
Sbjct: 137 GSQFLNFPLEVPPTLLNLDKHSIHNWRQRQSTDSCTQDSIEFKSS---NDFVLNPQTSES 196

Query: 181 LSDADA--------LLRSVGSK----PLESNE------------LEVASSQLHEPFETA- 240
           +SD  A        +L   GSK    P  +N             L+   S+  E  E A 
Sbjct: 197 MSDHHATNESQNIQILIDDGSKKEEEPGATNHRFSFELSDGDVLLQSVGSKPLESNELAV 256

Query: 241 ------------KENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGN 259
                       KENSP   HTSN  EE  K +G+ AHQ QEHHS+TLG VKEFNFD+GN
Sbjct: 257 ESSPIHEPFETTKENSPHGDHTSNVIEEKTKADGDEAHQRQEHHSVTLGSVKEFNFDNGN 316

[Close]

BLAST of CmoCh16G006450 vs. NCBI nr
Match: gi|255537511|ref|XP_002509822.1| (PREDICTED: uncharacterized protein LOC8287397 [Ricinus communis])

HSP 1 Score: 189.9 bits (481), Expect = 5.6e-45
Identity = 128/291 (43.99%), Postives = 163/291 (56.01%), Query Frame = 1


Query: 1   MCSPDGPSSIFAIGPFAHETQLVS--------TFESTAPFTP--ESTHLIRPSSPEVPFA 60
           M SP GP+SIFAIGP+AHETQLVS        T  STAPFTP  ES  L  PSSPEVPFA
Sbjct: 132 MYSPSGPASIFAIGPYAHETQLVSPPAFSTFTTEPSTAPFTPPPESVQLTTPSSPEVPFA 191

Query: 61  QVLLPSLQKAESDNQCSFPNDYFQSYQFYPCSPISHLISPRPVISRSGSSSRLPDCDFAS 120
           Q+L PS +  E+  +  F N  FQSYQFYP SP+  LISP   IS SG+SS  PD +FA+
Sbjct: 192 QLLEPSNRNGEAGLRFPFSNYEFQSYQFYPGSPVGQLISPSSGISGSGTSSPFPDGEFAA 251

Query: 121 SGSQFSNFPLEVPPTLLDLDKCSTYSWQQRRSTDSYSQDSIGFKS--------------- 180
           +G +F  F + VPP LL+LDK S +    R+ + + + D++   S               
Sbjct: 252 AGPRFLEFQMAVPPKLLNLDKLSVHECGSRQGSGTLTPDAVRATSCSFPLDRQCSDIASN 311

Query: 181 ----TERRKPVAANHRFSFELSDADALLRSVGSKPL-------ESNELEVASSQLHEPFE 240
                E +    A+ R SF+LS  DA LR    KP        ES + E+A+ ++ +  E
Sbjct: 312 RHSDNENKDDQVADLRVSFDLSAEDA-LRYAEPKPASPVKIMPESMKNEIAAEKVQKSSE 371

Query: 241 TAKENSPAVCHTSNGTEEYAKTNGEHAHQHQEHHSLTLGFVKEFNFDHGNG 256
                   V  TSNG  E A T GE   +HQ+H +LTLG  KEFNFD+ +G
Sbjct: 372 IRHNFECRVGETSNGILEQASTGGEKTPRHQKHRTLTLGTFKEFNFDNADG 421

The following BLAST results are available for this feature:

BLAST of CmoCh16G006450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh16G006450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY57_CUCSA	1.3e-69	56.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047980 PE=4 SV=1	[more]
B9RCD8_RICCO	3.9e-45	43.99	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1687100 PE=4 SV=1	[more]
M5WM36_PRUPE	8.2e-43	42.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005552mg PE=4 SV=1	[more]
A0A067JZI1_JATCU	1.2e-41	42.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20571 PE=4 SV=1	[more]
W9QH33_9ROSA	1.7e-40	42.96	Uncharacterized protein OS=Morus notabilis GN=L484_024256 PE=4 SV=1	[more]

BLAST of CmoCh16G006450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52430.1	7.6e-16	39.75	hydroxyproline-rich glycoprotein family protein	[more]
AT1G63720.1	3.5e-13	32.11	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glyc...	[more]
AT4G25620.1	5.6e-11	30.46	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CmoCh16G006450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102256\|ref\|XP_008452033.1\|	2.6e-74	57.76	PREDICTED: uncharacterized protein LOC103493162 isoform X2 [Cucumis melo]	[more]
gi\|659102254\|ref\|XP_008452032.1\|	2.6e-74	57.76	PREDICTED: uncharacterized protein LOC103493162 isoform X1 [Cucumis melo]	[more]
gi\|449457656\|ref\|XP_004146564.1\|	1.9e-69	56.25	PREDICTED: uncharacterized protein LOC101220378 [Cucumis sativus]	[more]
gi\|700198179\|gb\|KGN53337.1\|	1.9e-69	56.25	hypothetical protein Csa_4G047980 [Cucumis sativus]	[more]
gi\|255537511\|ref\|XP_002509822.1\|	5.6e-45	43.99	PREDICTED: uncharacterized protein LOC8287397 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006450.1	CmoCh16G006450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31798	FAMILY NOT NAMED	coord: 1..170 score: 8.2
None	No IPR available	PANTHER	PTHR31798:SF2	SUBFAMILY NOT NAMED	coord: 1..170 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G006450	Cucsa.106790	Cucumber (Gy14) v1	cgycmoB0244
CmoCh16G006450	CmaCh16G005950	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G006450	CmaCh04G007380	Cucurbita maxima (Rimu)	cmacmoB700
CmoCh16G006450	Cla014629	Watermelon (97103) v1	cmowmB301
CmoCh16G006450	Csa4G047980	Cucumber (Chinese Long) v2	cmocuB325
CmoCh16G006450	MELO3C016355	Melon (DHL92) v3.5.1	cmomeB294
CmoCh16G006450	ClCG07G008110	Watermelon (Charleston Gray)	cmowcgB294
CmoCh16G006450	CSPI04G05770	Wild cucumber (PI 183967)	cmocpiB332
CmoCh16G006450	Lsi07G008860	Bottle gourd (USVL1VR-Ls)	cmolsiB317
CmoCh16G006450	Cp4.1LG14g02100	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G006450	Cp4.1LG01g00030	Cucurbita pepo (Zucchini)	cmocpeB313
CmoCh16G006450	Cp4.1LG01g06770	Cucurbita pepo (Zucchini)	cmocpeB316
CmoCh16G006450	MELO3C016355.2	Melon (DHL92) v3.6.1	cmomedB336
CmoCh16G006450	CsaV3_4G005930	Cucumber (Chinese Long) v3	cmocucB0388
CmoCh16G006450	Cla97C07G135260	Watermelon (97103) v2	cmowmbB336
CmoCh16G006450	Bhi01G001808	Wax gourd	cmowgoB0428
CmoCh16G006450	CsGy4G005640	Cucumber (Gy14) v2	cgybcmoB467
CmoCh16G006450	Carg14135	Silver-seed gourd	carcmoB1258
CmoCh16G006450	Carg22200	Silver-seed gourd	carcmoB0803

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G006450	CmoCh04G007840	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G006450	Wild cucumber (PI 183967)	cmocpiB338
CmoCh16G006450	Cucumber (Chinese Long) v2	cmocuB330
CmoCh16G006450	Melon (DHL92) v3.5.1	cmomeB277
CmoCh16G006450	Watermelon (Charleston Gray)	cmowcgB284
CmoCh16G006450	Watermelon (97103) v1	cmowmB313
CmoCh16G006450	Bottle gourd (USVL1VR-Ls)	cmolsiB288
CmoCh16G006450	Bottle gourd (USVL1VR-Ls)	cmolsiB310
CmoCh16G006450	Cucumber (Gy14) v2	cgybcmoB309
CmoCh16G006450	Cucumber (Gy14) v2	cgybcmoB596
CmoCh16G006450	Melon (DHL92) v3.6.1	cmomedB314
CmoCh16G006450	Cucumber (Chinese Long) v3	cmocucB0400
CmoCh16G006450	Cucumber (Chinese Long) v3	cmocucB0403
CmoCh16G006450	Watermelon (97103) v2	cmowmbB311
CmoCh16G006450	Watermelon (97103) v2	cmowmbB330
CmoCh16G006450	Cucurbita moschata (Rifu)	cmocmoB238
CmoCh16G006450	Cucumber (Gy14) v1	cgycmoB0825
CmoCh16G006450	Cucurbita maxima (Rimu)	cmacmoB290