CmoCh16G006030 (gene) Cucurbita moschata (Rifu)

NameCmoCh16G006030
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr16 : 2942952 .. 2945787 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAATGTGAAAAGCCACCATTTACAATGTCCTTACATCCTGCAGAAGTTGAGCCGAAGCAGAAGGTAGATTCCTTGCTTTCGAGCTTTTCGATGTTCTCAATAGTTTGATTACTGAATAAGTTCTCTTGCGAAAGCTGCAGCTGATGATGGTCGTGGTCATTTTCCTTCTTTTCTTGTATTTTTGGTGAATGACATGATTGGGCTAAATAGTTTCCTTGGGAACAAGTGTGCTTTCCTCGATAGGTAATGTCAAACACAGAATGATCTTCATCTGATCTCTGCACTTGCTTTATTGCCCAACAATTCTGTGTATTGCGGAAAGTGCATCTATAGTAGCTTCTGCAAGTACACAACAAACAGGTATTAGATTTATTGATGTGAAACAGTAATAAGATTATAATTATAGGTCTACAATATATTTTGATATGGAAAATTGGATTCTTGTATTTTATTTGGTTTGGGTTCATGATAATTTTTTCTTTGTTTCTTTTCAGTTAGCTTTAAAGAAAGTGGACTTTAACTTTGAATTTTTAGCCGCCGACGTTTCCTCCTTTTTTATGTCAAATTCCTTGTAGTTTCTTCTGGTTTTCCTTCATTGGGCCAATAGCATTCCTCCATTACAAGAACATCAAAATTTAAGATCTCCCCTCCCCCTAGCATGTTTGTATATATACTGAAGCAATGATATTTGTTTAAAATATTACTGTGGGGTATTAAAATATATGTTACCGTGTATGCCTTGCGTGTTTTTCGAGCAGGAAGGAGAAGTCATCTCACCTGGGAAATGTTGCACCAAGTATGTCCTTTTGGCCATATTTTCTCCAGCTATAACCATCCTCATGGGGTCCTTCGAATCCCGTCTCGGAGTTCACTTTCACTTGTTCTGTCCATCTGGGCTGTGTCTTTCTGTAATCACAGAATCATAAAGATTTTTTTATTTGTTTCCAAGAATTGAACTTGTTTACTAACTAAGCTCATATTTGTTCTAAGGTTGACTTTGAAAAGCTGGAAAGAAAATTCTTAAATTCACCTCTTCATTGATTCTTTTCTGGGGTCCTGAGGGTCCTTGAGGCCTTTACCAGAGTCATCACTAGAAAGACTTCCATTAACAGAAATTGGAGAGCCTGGCAAAGCAAAAGCTGCTTCTACCATTTGAGGTTGACTCATTGGTCCATTCCATTTCAGTATCGAAAGAGCCTTATCATATGAAGATATAATCCCATGTACTAATGATCCTCTGCTTTCTTCTGCAGATGCTGAACTCAACTCTGCTTTCAACTGCTTGGTAAGCTCCATCCCCTGAATTAGCTCACCAATGAGTGACTTTTGATCCCAGCTCCACCCACTTTCCATTTTCAATTCCTCTCAGTTTTCGTAAAACGAACTGAACCACCCTACCCTACCACTGTGCTAGTTCATGGTAGGAAGAACAAGAGCTCAGTGCATTTCAGTTCGGATTTGTAGGTAAGTCAAGAAGCAGAAGCTAGAGGAAATGGAAGACCCAAATGGTAAAGAATCAGAGACAACAAACATGGAAGTAGCCAGATGAGGTAATTTGGTTAACTGGGTATATTTGTGTTTATTTAAAACTGAACTGAGAGAGAAGAAGAAGAAGAATGCTTTGGTTTTAATAAGAACCGATCTTGGTTTTATACAAGTTCAAAAAGGAAGACAACTTTATTTCATTTTTCTTAAAAGAAAATGCTGTTGAACAGTTAGAAGTTGGGGAAACTTTGACTGAGACAGCCCCCTCAGTTGCTTTCTGGTCTTTGGTCATTGGCTGAGTGGAGTAAGATTAGTGTGGAAGTCCAGGTTCTAAAGCTGACCAAGTCCACTTCCACTTCATAATTTAACTTCCAAAAGGGTTTCTGTTTCTCTCTCTAGATCCTACGGCTGTGATTTGTTGAGAATGAAAATTTCATAATTGAGATAGTGAGACAAGTGGAAAGTCAGAGTTCAAGCTTGGAGAGTAGACTAAGAATTTTCAAACCTTTCGTCCGCGTTGTGGTATAGTAAACAACTACTTTTCATCTTTATTATTATTATTATTATTTTCTCTTTTTTTTTTAAATCTCTAAGGCTTATGATTGTGAGTGGACTGCTCTTTTCATGCTATTTTTTTGTTCTCTTGCTGATTTTTCCTTAATCCTACTTGGTTTAAATCTTAGAGCTTAGTATTAGAAAAGCTTGGTCAAAATTAATGATTTCTGTGGGCATATTTGTTTTACTAAATTTTGTAATTTGGTCATTCTGGTTGGGCTTGATTATTTTTATCTGATATGACGTCATAATAGTAAGGTGATGTGATGTGATGTAATTGAAATTGCTACATTAAATTTCATTCTTGACCTTTCAGCCAATTTCATATTTAATTTTTAGTTAGTATCTTTTTGGTTAATCACATATTTAATTTATGTGTCGGGTTCTTTATCTTATGTATTCTTGACACGAGGGATGAAATTTTTATTCTCAGGTAAATTGGCTTGTTGATCCTGTACGTCGGATCAAAGTCAGGCATTTAAAGAAATTTTGGTCCTTAAAAGACTTTATGTCTTTAAATTTTATAATATTCAAATCGCTTTCCTTTCAAAAAGTCTTCAGCCTTTTGATCTTTGCAAGTCTTCACAATGCTTTTAAATGTGTTTGTGTGAGCTTTGGGTTCTATTATTTGGATTTGGAACACTGAACTCGAATTCAAATATTATGACTCAATTTGACTAAACTAGGCTTATTTTTTATTATATGGTCATTATGAACATTATAAAAGCTTCAATTTGTAATTAATTTAAATTCAATATTTTTTTAATTTCTTCAGACAGTTGAGAAATAA

mRNA sequence

ATGGCTAAATGTGAAAAGCCACCATTTACAATGTCCTTACATCCTGCAGAAGTTGAGCCGAAGCAGAAGTTAGCTTTAAAGAAAGTGGACTTTAACTTTGAATTTTTAGCCGCCGACGAAGGAGAAGTCATCTCACCTGGGAAATGTTGCACCAATATCGAAAGAGCCTTATCATATGAAGATATAATCCCATGTACTAATGATCCTCTGCTTTCTTCTGCAGATGCTGAACTCAACTCTGCTTTCAACTGCTTGACAGTTGAGAAATAA

Coding sequence (CDS)

ATGGCTAAATGTGAAAAGCCACCATTTACAATGTCCTTACATCCTGCAGAAGTTGAGCCGAAGCAGAAGTTAGCTTTAAAGAAAGTGGACTTTAACTTTGAATTTTTAGCCGCCGACGAAGGAGAAGTCATCTCACCTGGGAAATGTTGCACCAATATCGAAAGAGCCTTATCATATGAAGATATAATCCCATGTACTAATGATCCTCTGCTTTCTTCTGCAGATGCTGAACTCAACTCTGCTTTCAACTGCTTGACAGTTGAGAAATAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G006030.1CmoCh16G006030.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G006030MELO3C032815.2Melon (DHL92) v3.6.1cmomedB345
CmoCh16G006030Carg22243Silver-seed gourdcarcmoB0803
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G006030Cucumber (Gy14) v2cgybcmoB309
CmoCh16G006030Cucumber (Gy14) v2cgybcmoB467
CmoCh16G006030Cucumber (Gy14) v2cgybcmoB596
CmoCh16G006030Melon (DHL92) v3.6.1cmomedB314
CmoCh16G006030Melon (DHL92) v3.6.1cmomedB336
CmoCh16G006030Silver-seed gourdcarcmoB0056
CmoCh16G006030Silver-seed gourdcarcmoB0489
CmoCh16G006030Cucumber (Chinese Long) v3cmocucB0388
CmoCh16G006030Cucumber (Chinese Long) v3cmocucB0400
CmoCh16G006030Cucumber (Chinese Long) v3cmocucB0403
CmoCh16G006030Watermelon (97103) v2cmowmbB311
CmoCh16G006030Watermelon (97103) v2cmowmbB330
CmoCh16G006030Watermelon (97103) v2cmowmbB338
CmoCh16G006030Wax gourdcmowgoB0423
CmoCh16G006030Wax gourdcmowgoB0433
CmoCh16G006030Cucurbita moschata (Rifu)cmocmoB238
CmoCh16G006030Cucurbita moschata (Rifu)cmocmoB285
CmoCh16G006030Cucumber (Gy14) v1cgycmoB0244
CmoCh16G006030Cucumber (Gy14) v1cgycmoB0825
CmoCh16G006030Cucurbita maxima (Rimu)cmacmoB290
CmoCh16G006030Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G006030Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G006030Wild cucumber (PI 183967)cmocpiB332
CmoCh16G006030Wild cucumber (PI 183967)cmocpiB338
CmoCh16G006030Cucumber (Chinese Long) v2cmocuB325
CmoCh16G006030Cucumber (Chinese Long) v2cmocuB330
CmoCh16G006030Melon (DHL92) v3.5.1cmomeB277
CmoCh16G006030Melon (DHL92) v3.5.1cmomeB294
CmoCh16G006030Melon (DHL92) v3.5.1cmomeB301
CmoCh16G006030Watermelon (Charleston Gray)cmowcgB284
CmoCh16G006030Watermelon (Charleston Gray)cmowcgB296
CmoCh16G006030Watermelon (97103) v1cmowmB313
CmoCh16G006030Watermelon (97103) v1cmowmB304
CmoCh16G006030Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G006030Cucurbita pepo (Zucchini)cmocpeB313
CmoCh16G006030Bottle gourd (USVL1VR-Ls)cmolsiB288
CmoCh16G006030Bottle gourd (USVL1VR-Ls)cmolsiB310
CmoCh16G006030Bottle gourd (USVL1VR-Ls)cmolsiB314