CmoCh16G004050 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTGAATTTGGAGCCGATGAGTCCAAAACCCTTCTTCCAAGGAGAAGGTGGATCCTTCCATAAATGGTTCCCTTCGGATTTTCCGATGATTGCTCACACCAAAGTCGGCGCCGGCCGACTCCTCCTCCGGCCACGTGGCTTCGCCCTTCCCCATAACTCCGATTCCTCCAAAGTTGGATACGTTCTTCAAGGTTTTTATTTATTTATTTTTATTTTTAATATTTAGTGTAAATTGAGAAATAAGGGTCGTGTAAGATGGTTCGTAAATTGAATTGGGTCGGGTTGGAATATCTTTTATAAAATTTTTTAATCAAACAACTTTTATTAAATAATTAATTTTATTTTTTTAATAAAAATAATAAATTAATTTATAATATATTTATTTATTTTGAAACCCATAATTAAGATTTACTACTGAATTAAATAAATATATGTACATATAATTGTATTCAGGTATTGGACTTGCCGGGATTCTATTCCCAGGAAGCTCCGACGAAGCAGTGGTGAGACTTAAGAAAGGCGACCTGATTCCGGTGCCGGAGGGAGTCACCTCCTGGTGGTTCAAGAGACTCCGATTTCGAAGTCCTTCTCGTCGGCGACACCCGAAACGCCCTAATTCCCGGCGATATTACCTACGTCGTCTTCACCGGACCCCTTGGAGTACTACAAGGCTTCTCGCCGGACTACGTTAA ATGGAGTTGAATTTGGAGCCGATGAGTCCAAAACCCTTCTTCCAAGGAGAAGGTGGATCCTTCCATAAATGGTTCCCTTCGGATTTTCCGATGATTGCTCACACCAAAGTCGGCGCCGGCCGACTCCTCCTCCGGCCACGTGGCTTCGCCCTTCCCCATAACTCCGATTCCTCCAAAGTTGGATACGTTCTTCAAGGTATTGGACTTGCCGGGATTCTATTCCCAGGAAGCTCCGACGAAGCAGTGGTGAGACTTAAGAAAGGCGACCTGATTCCGGTGCCGGAGGGAGTCACCTCCTGGTGGTTCAAGAGACTCCGATTTCGAAGTCCTTCTCGTCGGCGACACCCGAAACGCCCTAATTCCCGGCGATATTACCTACGTCGTCTTCACCGGACCCCTTGGAGTACTACAAGGCTTCTCGCCGGACTACGTTAA ATGGAGTTGAATTTGGAGCCGATGAGTCCAAAACCCTTCTTCCAAGGAGAAGGTGGATCCTTCCATAAATGGTTCCCTTCGGATTTTCCGATGATTGCTCACACCAAAGTCGGCGCCGGCCGACTCCTCCTCCGGCCACGTGGCTTCGCCCTTCCCCATAACTCCGATTCCTCCAAAGTTGGATACGTTCTTCAAGGTATTGGACTTGCCGGGATTCTATTCCCAGGAAGCTCCGACGAAGCAGTGGTGAGACTTAAGAAAGGCGACCTGATTCCGGTGCCGGAGGGAGTCACCTCCTGGTGGTTCAAGAGACTCCGATTTCGAAGTCCTTCTCGTCGGCGACACCCGAAACGCCCTAATTCCCGGCGATATTACCTACGTCGTCTTCACCGGACCCCTTGGAGTACTACAAGGCTTCTCGCCGGACTACGTTAA
BLAST of CmoCh16G004050 vs. Swiss-Prot
Match: LEGB4_VICFA (Legumin type B OS=Vicia faba GN=LEB4 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.7e-07 Identity = 31/121 (25.62%), Postives = 50/121 (41.32%), Query Frame = 1
BLAST of CmoCh16G004050 vs. Swiss-Prot
Match: LEGJ_PEA (Legumin J OS=Pisum sativum GN=LEGJ PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 31/121 (25.62%), Postives = 51/121 (42.15%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TrEMBL
Match: A0A0A0LC21_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G218170 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 6.3e-45 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TrEMBL
Match: Q9M674_CUCME (Globulin-like protein (Fragment) OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.2e-42 Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TrEMBL
Match: A0A0A0L6K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G218160 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-35 Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TrEMBL
Match: A0A0A0K550_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G337100 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.5e-33 Identity = 63/102 (61.76%), Postives = 85/102 (83.33%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TrEMBL
Match: A0A0A0KA23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368140 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30 Identity = 62/101 (61.39%), Postives = 83/101 (82.18%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TAIR10
Match: AT1G07750.1 (AT1G07750.1 RmlC-like cupins superfamily protein) HSP 1 Score: 115.2 bits (287), Expect = 3.4e-26 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 1
BLAST of CmoCh16G004050 vs. TAIR10
Match: AT2G28680.1 (AT2G28680.1 RmlC-like cupins superfamily protein) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-25 Identity = 51/102 (50.00%), Postives = 65/102 (63.73%), Query Frame = 1
BLAST of CmoCh16G004050 vs. NCBI nr
Match: gi|700202448|gb|KGN57581.1| (hypothetical protein Csa_3G218170 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 9.1e-45 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 1
BLAST of CmoCh16G004050 vs. NCBI nr
Match: gi|778680244|ref|XP_011651276.1| (PREDICTED: legumin J-like [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 9.1e-45 Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 1
BLAST of CmoCh16G004050 vs. NCBI nr
Match: gi|659112131|ref|XP_008456077.1| (PREDICTED: glutelin type-B 2-like [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 2.2e-43 Identity = 83/102 (81.37%), Postives = 91/102 (89.22%), Query Frame = 1
BLAST of CmoCh16G004050 vs. NCBI nr
Match: gi|7595348|gb|AAF64423.1|AF206627_1 (globulin-like protein [Cucumis melo]) HSP 1 Score: 179.9 bits (455), Expect = 3.2e-42 Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 1
BLAST of CmoCh16G004050 vs. NCBI nr
Match: gi|449467587|ref|XP_004151504.1| (PREDICTED: legumin J [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 2.2e-35 Identity = 68/99 (68.69%), Postives = 81/99 (81.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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