CmoCh16G003250 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G003250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box family protein
LocationCmo_Chr16 : 1485072 .. 1486562 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTGAGGCTGAGATCCGTGGAGTCCAAGGAGACTCTCAGAATTGAAGTTCCCGATCAATCTACCATCGAGCACCTGAAACAGACGCTCCTCCAGGCACTGTCTTCTTCCTTTTCCGCTGATTCTCTTCACCTCTCTCTCAATCGGAAGGACGAGCTTCAAGGATCGTCGCCGGAGGATTCGCTGCACTCCACTGGTATCACTTCAGGTGACCTTGTTTTCTTCACTTTTAAACCTTCCGGGTTTTCTTCTCGAGGAGGTACGTCGATTCAAGCTTCTTCACAAGATTCGTCTTCGTCGCGACCAGGAAAGGAAATTCAAGGCATCGATTGTGATATTAAAAAACCTAGGTTGGAGAATTCGATGCCTGAATCCATAGAATCCAAGTCCTTGGATGCAGAAATGACTACAGGCGGCATGGTCGAGGACGGGGAGAAATTTTTGGAGTCGGATTGTGAAGAAATGGACGTTGAGGAAGATCCAATCGTTGATGTGGTGAAGAAATGTTCGAGGCCGATCTTTTTGAGGAGAGTGCTGAAGGAGGAGCTAGGTTATGATCGTAATGCTCACAAGCTTTTGGTAACTGCCGTTCACGCAGTACTTCTGGAGTCTGGATTTGTGCTGATTGATCCTAATTTAGGTTCTGAGGATAATCCTTTCCGTATGCCGGAAGATTGGCCTTCCCCATCGTTTACGATGTCGCTTTGGTACACCCTACCTAAACTTTTGGCCAAGGAGGACAAGAGTTCTACCATGACTGAAGTAGTTTTATTGAAGTTTCAGAGTTTGGGGCACTTTGTTAATGTTTATGGGTCTCTTAACTGCAGTAGAGGATCTAGTGTTTATCGTATATCTTTGGATGAGAGAAAATTTGCACCAAATCTTGATCTGATTTGGGTGGATTCAGTATCCAGCTACATAATGGATGAAAAAGAAGGGGACCCAGATAAACAAGTTTTTGAACTCTGGAAGCTAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATCTCTGTGAAAAAACTGGTTTACCAACTCCTGCAAGCTTTATGCTACTCCCAGCTGATCTGAAGATGAAGATCTTAGAGGCTCTTCCTGGTGTTGATATTGCAAGAGTTGAATGTGTGTGTACTGAATTGCTTTACTTGGCCTCCAGCAATGAGCTGTGGAAGATGAAGTTCACTGAAGAGTTTGGTTCCGAGGACAGTGTTTCAGGAAAAAGGCTATGGAAGTCACAATTTGTTGCACGTTACGAAAACGAAAAGTTGAGAAGCAGGAGAACTAACCATGTGAGGGATTTTCTTAGTTTAGGGTGGCCGGTGCGTCGACCCCCTTATCCGTTCCCAGCTCCTCATGTTATTGGGGGAGATTATGATATTGTGCCTAGTATCAGGCTCCCTACACATGGAATTCCTGGACAATCGTTACGGTGGACGCCGAGGCGTCGACAAGTTTTCATTCCACATTACGATTTGATAGGACGATGA

mRNA sequence

ATGAAATTGAGGCTGAGATCCGTGGAGTCCAAGGAGACTCTCAGAATTGAAGTTCCCGATCAATCTACCATCGAGCACCTGAAACAGACGCTCCTCCAGGCACTGTCTTCTTCCTTTTCCGCTGATTCTCTTCACCTCTCTCTCAATCGGAAGGACGAGCTTCAAGGATCGTCGCCGGAGGATTCGCTGCACTCCACTGGTATCACTTCAGGTGACCTTGTTTTCTTCACTTTTAAACCTTCCGGGTTTTCTTCTCGAGGAGGTACGTCGATTCAAGCTTCTTCACAAGATTCGTCTTCGTCGCGACCAGGAAAGGAAATTCAAGGCATCGATTGTGATATTAAAAAACCTAGGTTGGAGAATTCGATGCCTGAATCCATAGAATCCAAGTCCTTGGATGCAGAAATGACTACAGGCGGCATGGTCGAGGACGGGGAGAAATTTTTGGAGTCGGATTGTGAAGAAATGGACGTTGAGGAAGATCCAATCGTTGATGTGGTGAAGAAATGTTCGAGGCCGATCTTTTTGAGGAGAGTGCTGAAGGAGGAGCTAGGTTATGATCGTAATGCTCACAAGCTTTTGGTAACTGCCGTTCACGCAGTACTTCTGGAGTCTGGATTTGTGCTGATTGATCCTAATTTAGGTTCTGAGGATAATCCTTTCCGTATGCCGGAAGATTGGCCTTCCCCATCGTTTACGATGTCGCTTTGGTACACCCTACCTAAACTTTTGGCCAAGGAGGACAAGAGTTCTACCATGACTGAAGTAGTTTTATTGAAGTTTCAGAGTTTGGGGCACTTTGTTAATGTTTATGGGTCTCTTAACTGCAGTAGAGGATCTAGTGTTTATCGTATATCTTTGGATGAGAGAAAATTTGCACCAAATCTTGATCTGATTTGGGTGGATTCAGTATCCAGCTACATAATGGATGAAAAAGAAGGGGACCCAGATAAACAAGTTTTTGAACTCTGGAAGCTAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATCTCTGTGAAAAAACTGGTTTACCAACTCCTGCAAGCTTTATGCTACTCCCAGCTGATCTGAAGATGAAGATCTTAGAGGCTCTTCCTGGTGTTGATATTGCAAGAGTTGAATGTGTGTGTACTGAATTGCTTTACTTGGCCTCCAGCAATGAGCTGTGGAAGATGAAGTTCACTGAAGAGTTTGGTTCCGAGGACAGTGTTTCAGGAAAAAGGCTATGGAAGTCACAATTTGTTGCACGTTACGAAAACGAAAAGTTGAGAAGCAGGAGAACTAACCATGTGAGGGATTTTCTTAGTTTAGGGTGGCCGGTGCGTCGACCCCCTTATCCGTTCCCAGCTCCTCATGTTATTGGGGGAGATTATGATATTGTGCCTAGTATCAGGCTCCCTACACATGGAATTCCTGGACAATCGTTACGGTGGACGCCGAGGCGTCGACAAGTTTTCATTCCACATTACGATTTGATAGGACGATGA

Coding sequence (CDS)

ATGAAATTGAGGCTGAGATCCGTGGAGTCCAAGGAGACTCTCAGAATTGAAGTTCCCGATCAATCTACCATCGAGCACCTGAAACAGACGCTCCTCCAGGCACTGTCTTCTTCCTTTTCCGCTGATTCTCTTCACCTCTCTCTCAATCGGAAGGACGAGCTTCAAGGATCGTCGCCGGAGGATTCGCTGCACTCCACTGGTATCACTTCAGGTGACCTTGTTTTCTTCACTTTTAAACCTTCCGGGTTTTCTTCTCGAGGAGGTACGTCGATTCAAGCTTCTTCACAAGATTCGTCTTCGTCGCGACCAGGAAAGGAAATTCAAGGCATCGATTGTGATATTAAAAAACCTAGGTTGGAGAATTCGATGCCTGAATCCATAGAATCCAAGTCCTTGGATGCAGAAATGACTACAGGCGGCATGGTCGAGGACGGGGAGAAATTTTTGGAGTCGGATTGTGAAGAAATGGACGTTGAGGAAGATCCAATCGTTGATGTGGTGAAGAAATGTTCGAGGCCGATCTTTTTGAGGAGAGTGCTGAAGGAGGAGCTAGGTTATGATCGTAATGCTCACAAGCTTTTGGTAACTGCCGTTCACGCAGTACTTCTGGAGTCTGGATTTGTGCTGATTGATCCTAATTTAGGTTCTGAGGATAATCCTTTCCGTATGCCGGAAGATTGGCCTTCCCCATCGTTTACGATGTCGCTTTGGTACACCCTACCTAAACTTTTGGCCAAGGAGGACAAGAGTTCTACCATGACTGAAGTAGTTTTATTGAAGTTTCAGAGTTTGGGGCACTTTGTTAATGTTTATGGGTCTCTTAACTGCAGTAGAGGATCTAGTGTTTATCGTATATCTTTGGATGAGAGAAAATTTGCACCAAATCTTGATCTGATTTGGGTGGATTCAGTATCCAGCTACATAATGGATGAAAAAGAAGGGGACCCAGATAAACAAGTTTTTGAACTCTGGAAGCTAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATCTCTGTGAAAAAACTGGTTTACCAACTCCTGCAAGCTTTATGCTACTCCCAGCTGATCTGAAGATGAAGATCTTAGAGGCTCTTCCTGGTGTTGATATTGCAAGAGTTGAATGTGTGTGTACTGAATTGCTTTACTTGGCCTCCAGCAATGAGCTGTGGAAGATGAAGTTCACTGAAGAGTTTGGTTCCGAGGACAGTGTTTCAGGAAAAAGGCTATGGAAGTCACAATTTGTTGCACGTTACGAAAACGAAAAGTTGAGAAGCAGGAGAACTAACCATGTGAGGGATTTTCTTAGTTTAGGGTGGCCGGTGCGTCGACCCCCTTATCCGTTCCCAGCTCCTCATGTTATTGGGGGAGATTATGATATTGTGCCTAGTATCAGGCTCCCTACACATGGAATTCCTGGACAATCGTTACGGTGGACGCCGAGGCGTCGACAAGTTTTCATTCCACATTACGATTTGATAGGACGATGA
Homology
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BLAST of CmoCh16G003250 vs. Swiss-Prot
Match: SKI22_ARATH (F-box protein SKIP22 OS=Arabidopsis thaliana GN=SKIP22 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.3e-61
Identity = 191/516 (37.02%), Postives = 274/516 (53.10%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLR  E++ETL++E+ D  T+  L++ +   + SS     +HLSLNRKDEL   SPE
Sbjct: 1   MKLRLRHHETRETLKLELADADTLHDLRRRINPTVPSS-----VHLSLNRKDELITPSPE 60

Query: 61  DSLHSTGITSGDLVFFTFKP---SGFSSRGGTSIQASSQDSSSSRPGKEIQGIDCDIKKP 120
           D+L S G+ SGDL++F+ +    S +  R   ++ AS  +S+ +     I   + D+   
Sbjct: 61  DTLRSLGLISGDLIYFSLEAGESSNWKLRDSETV-ASQSESNQTSVHDSIGFAEVDVVPD 120

Query: 121 RLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKKCSRPIFLR 180
           + +++   S+E    D E    GM E  E     D E++D+E        K+ S P FL+
Sbjct: 121 QAKSNPNTSVE----DPEGDISGM-EGPEPM---DVEQLDMELAAAGS--KRLSEPFFLK 180

Query: 181 RVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTMSLW 240
            +L E+ G D +    L  +VHAV+LESGFVL+  N GS+   F           T+SL 
Sbjct: 181 NILLEKSG-DTSELTTLALSVHAVMLESGFVLL--NHGSDKFNFS------KELLTVSLR 240

Query: 241 YTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDERKFAPNLD 300
           YTLP+L+  +D ++   E V +KFQ+LG  V VYG++  S G     ++LD+R+F P +D
Sbjct: 241 YTLPELIKSKDTNTI--ESVSVKFQNLGPVVVVYGTVGGSSGR--VHMNLDKRRFVPVID 300

Query: 301 LIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFMLLPAD 360
           L+   S S    +E      ++VF  W++VKD L +PLLI +C+K GL  P   M LP +
Sbjct: 301 LVMDTSTSD---EEGSSSIYREVFMFWRMVKDRLVIPLLIGICDKAGLEPPPCLMRLPTE 360

Query: 361 LKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFG------SEDSVSGKRLW 420
           LK+KILE LPGV I  + CVCTE+ YLAS N+LWK K  EE        + DSV+    W
Sbjct: 361 LKLKILELLPGVSIGNMACVCTEMRYLASDNDLWKQKCLEEVNNFVVTEAGDSVN----W 420

Query: 421 KSQFVARYENEKLRS------RRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSI 480
           K++F   +  ++L +      R+    R  +S G    R    FP    I GD       
Sbjct: 421 KARFATFWRQKQLAAASDTFWRQNQLGRRNISTG----RSGIRFPR---IIGDPPFTWFN 473

Query: 481 RLPTHGI----PGQSLRWTPRRR--QVFIPHYDLIG 496
               HG     PGQS R   RR   Q+F P  +L G
Sbjct: 481 GDRMHGSIGIHPGQSARGLGRRTWGQLFTPRCNLGG 473

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BLAST of CmoCh16G003250 vs. Swiss-Prot
Match: FB17_ARATH (Putative F-box protein At1g23770 OS=Arabidopsis thaliana GN=At1g23770 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.9e-42
Identity = 111/263 (42.21%), Postives = 161/263 (61.22%), Query Frame = 1 

Query: 168 KKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDW 227
           K+ S P FL+ VL E+ G D +    L  +VHAV+LESGFVL+D   GS+   F      
Sbjct: 41  KRLSEPFFLKNVLLEKSG-DTSDLTALALSVHAVMLESGFVLLDH--GSDKFSFS----- 100

Query: 228 PSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSL--NCSRGSSVYRI 287
                ++SL YTLP+L+ ++D ++   E V ++FQ++G  + VYG+L  +C R   V+  
Sbjct: 101 -KKLLSVSLRYTLPELITRKDTNTV--ESVTVRFQNIGPRLVVYGTLGGSCKR---VHMT 160

Query: 288 SLDERKFAPNLDLIWVDSVSSYIMDEKEGDPD--KQVFELWKLVKDALALPLLIDLCEKT 347
           SLD+ +F P +DL+ VD++      EK+G     ++VF LW++VKD L +PLLI LC+K 
Sbjct: 161 SLDKSRFLPVIDLV-VDTLKF----EKQGSSSYYREVFMLWRMVKDELVIPLLIGLCDKA 220

Query: 348 GLPTPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGS-- 407
           GL +P   MLLP +LK+KILE LPGV I  + CVCTE+ YLAS N+LW+ K  EE     
Sbjct: 221 GLESPPCLMLLPTELKLKILELLPGVSIGYMACVCTEMRYLASDNDLWEHKCLEEGKGCL 280

Query: 408 EDSVSGKRLWKSQFVARYENEKL 425
               +G   WK +F + +  ++L
Sbjct: 281 WKLYTGDVDWKRKFASFWRRKRL 284

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BLAST of CmoCh16G003250 vs. Swiss-Prot
Match: FB81_ARATH (F-box protein At1g70360 OS=Arabidopsis thaliana GN=At1g70360 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-21
Identity = 75/199 (37.69%), Postives = 108/199 (54.27%), Query Frame = 1 

Query: 193 LLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTMSLWYTLPKLLAKEDKSST 252
           +++  VHAV+LESGFVL DP     D+  R      S    +SL YTLP +         
Sbjct: 12  IVIMTVHAVMLESGFVLFDP-----DSSMRFSF---SKKTLVSLNYTLPSVKG------- 71

Query: 253 MTEVVLLKFQS---LGHFVNVYGSLNCSRGSSVYRISLDERKFAPNLDLIWVDSVSSYIM 312
              +V L F+    +G FV V              +S+D+R +   +DL+ ++++ S   
Sbjct: 72  ---IVGLNFEKEAIVGSFVRV--------------VSIDKRSYVHIVDLL-METLKS--- 131

Query: 313 DEKEG--DPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFMLLPADLKMKILEALP 372
           DE+E     D +V   W+++KD +  PLL+DLC KTGL  P  F+ LP +LK KILE+LP
Sbjct: 132 DEEEDTLSIDCKVLVWWRMIKDGIVTPLLVDLCYKTGLELPPCFISLPRELKHKILESLP 174

Query: 373 GVDIARVECVCTELLYLAS 387
           GVDI  + CV +EL  +AS
Sbjct: 192 GVDIGTLACVSSELRDMAS 174

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BLAST of CmoCh16G003250 vs. TrEMBL
Match: E5GBH4_CUCME (F-box family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 3.7e-217
Identity = 398/510 (78.04%), Postives = 435/510 (85.29%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLRS+ESK+TLRIEVPD ST+ HLKQTLLQ LSSSFSADSLHLSLNRKDELQ SSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSTGITSGDLVFFTFKPSGFSSRGG--TSIQA---------SSQDSSSSRP---GKE 120
           DSLHS GITSGDLVFFTFKPS FSS G   T IQ+         SS  SSSS P   GK+
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 121 IQGIDCDIKKPRLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDV 180
           + GIDCD+KKPRLENS PES+   S  AE+TT  M+E      ESDCEEM+VEE+P V V
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIE------ESDCEEMEVEEEPTVVV 180

Query: 181 VKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPED 240
            KKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLI+PNLG ED+PFRMPED
Sbjct: 181 EKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPED 240

Query: 241 WPSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRIS 300
           WPSPSFTMSLWYTLP+LL K  K+STMTEVVLLKFQSLG+FVNVYGSLNCSRGSSVYR+S
Sbjct: 241 WPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS 300

Query: 301 LDERKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLP 360
           LDERKFAPNLDLIWVDSVS+YIMDEKEG+P+KQVFE WK+VKDALALPLLID+CEKTGLP
Sbjct: 301 LDERKFAPNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLP 360

Query: 361 TPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVS 420
            PASFMLLPAD+K+KILEALPGVDIARVECVCTEL YLASSNELWKMKF +EFG ED VS
Sbjct: 361 PPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVS 420

Query: 421 GKRLWKSQFVARYENEKLRSRRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSIR 480
           G R+WK++FV  YE EK R+RRT+++RD +S G   RRPPYPFP PH+IGGDYDIV  IR
Sbjct: 421 GNRVWKTKFVEYYEREKQRNRRTSNMRDAISFG-RHRRPPYPFPVPHIIGGDYDIVSGIR 480

Query: 481 LPTHGIPGQSLRWTPRRRQVFIPHYDLIGR 497
           LP +G+PGQSL   PRR  V IPHYDL GR
Sbjct: 481 LPVYGVPGQSLPRIPRRHAV-IPHYDLRGR 502

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BLAST of CmoCh16G003250 vs. TrEMBL
Match: A0A0A0KT22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000590 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 4.2e-213
Identity = 385/507 (75.94%), Postives = 433/507 (85.40%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLRS+ES ++LRIEVPD ST++HLK TLLQ LSSSFSADSLHLSLNRKDELQ SSPE
Sbjct: 1   MKLRLRSLESNQSLRIEVPDPSTLDHLKHTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQA--------SSQDSSSSRP---GKEIQG 120
           DSLHS GITSGDL+FFTFKP  FSS G TSIQ+        SSQ SSSS P   GK++ G
Sbjct: 61  DSLHSLGITSGDLLFFTFKPPEFSSLGATSIQSFQPPLPGSSSQVSSSSLPQVEGKQLLG 120

Query: 121 IDCDIKKPRLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKK 180
           IDCD+KKPRLENS PES+  +S  AE+T   M+E      ESDCEEM+VEE+P V V  +
Sbjct: 121 IDCDLKKPRLENSEPESVVPESSSAELTACSMIE------ESDCEEMEVEEEPTVVVENR 180

Query: 181 CSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPS 240
           CSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLI+PNLG +D+PFRMPEDWPS
Sbjct: 181 CSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFDDSPFRMPEDWPS 240

Query: 241 PSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDE 300
           PSFTMSLWYT+P+LL K +K+STMTEVVLLKFQSLG+FVNVYGSL+ SRGSSVYR+SLDE
Sbjct: 241 PSFTMSLWYTIPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDE 300

Query: 301 RKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPA 360
           RKFAPNLDLIWVDSVS+YI+DEKEG+P+KQVFE WK+VKDALALPLLID+CEKTGLP PA
Sbjct: 301 RKFAPNLDLIWVDSVSNYILDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPA 360

Query: 361 SFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVSGKR 420
           SFMLLPAD+K+KILEAL GVDIARVECVCTEL YLASSNELWKMKF +EFG ED VSG R
Sbjct: 361 SFMLLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNR 420

Query: 421 LWKSQFVARYENEKLRSRRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSIRLPT 480
            WK++FV  YE EK R+RRT+++RD ++ G   RRPPYPFP PH+IGGD+DIVP IRLP 
Sbjct: 421 NWKAKFVEYYEKEKQRNRRTSNMRDLINFG-RRRRPPYPFPVPHIIGGDFDIVPGIRLPV 480

Query: 481 HGIPGQSLRWTPRRRQVFIPHYDLIGR 497
           +G+PGQSL   PRR  V IPHYDL GR
Sbjct: 481 YGVPGQSLPRIPRRHAV-IPHYDLRGR 499

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BLAST of CmoCh16G003250 vs. TrEMBL
Match: A0A061E8A5_THECC (F-box family protein, putative OS=Theobroma cacao GN=TCM_007263 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.8e-91
Identity = 215/497 (43.26%), Postives = 296/497 (59.56%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSA--DSLHLSLNRKDELQGSS 60
           MKLRLR+ ESKETLRI+VP   +   L++TL  +L +   +   SL  SLN KD L   S
Sbjct: 1   MKLRLRNYESKETLRIQVPSPCSFLQLQETLSLSLPTPHPSPPSSLRFSLNAKDLLHAPS 60

Query: 61  PEDSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQASSQDSSSSRPGKEIQGI-DCDIKKP 120
           P  SL S G++SGDL++F+  P  FS        +S+QD  ++   +E   I +    + 
Sbjct: 61  PHASLQSIGVSSGDLIYFSLNPMVFSPI------SSNQDLQTATLVEETNEIPESSTNQE 120

Query: 121 RLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKKCSRPIFLR 180
                +P+  E  S + ++       +G ++++ D             V ++ S P FLR
Sbjct: 121 ASAQELPQLQEPMSTEPQVFQETEKTEGTEYMDIDA----------FAVSERFSEPYFLR 180

Query: 181 RVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTMSLW 240
           +VLKEEL  D + HKLL  AVHAVLLESGFV  DP  G + + F  P++WPSP   +S+ 
Sbjct: 181 KVLKEELADDGSNHKLLAIAVHAVLLESGFVGFDPVSGLQIDGFHFPDEWPSP---VSIC 240

Query: 241 YTLPKLLAKEDKS-STMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDERKFAPNL 300
           Y+LP+LL  +D S S +T+  +LKFQ+LGHFV VYGSL    GS +Y++SLDE +FAP L
Sbjct: 241 YSLPELLINDDNSGSNLTDYAVLKFQTLGHFVQVYGSL-VKGGSGLYKLSLDEYRFAPTL 300

Query: 301 DLIWVDSVSSYIMDEKEGD---PDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFML 360
           DL+W +   +   ++   +   P+ +VFE WK+VKD LALPLLIDL  +TGL  PA  M 
Sbjct: 301 DLVWANFDKNDSTNDNNNNNSYPENEVFEFWKIVKDGLALPLLIDLSYRTGLSLPACLMR 360

Query: 361 LPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVSGKRLWKS 420
           LP +LK++ILE+LPG DIAR+ CVC+E+ YLAS+N+LWK KF EEFG          WK 
Sbjct: 361 LPTELKLRILESLPGADIARMGCVCSEMQYLASNNDLWKQKFREEFGDCPGTMEIGNWKE 420

Query: 421 QFVARYENEKLRSRRTNHVRDFLSL----GWPVRRPPYPFPAPHVIGGDYDIVPSIRL-- 480
            F + +E+ K   R     R F  +     +P+RR P PF AP +IGGDYD +P + L  
Sbjct: 421 MFNSCWESRKKPKRAIPRWRGFRRVVRPFYFPIRRDPNPFLAPVMIGGDYDRLPGLVLAP 477

Query: 481 PTHGIPGQSL-RWTPRR 484
           P +  PG  L R+  RR
Sbjct: 481 PVYVPPGLRLPRFQGRR 477

[Close]
BLAST of CmoCh16G003250 vs. TrEMBL
Match: B9S7Z0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1382940 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.9e-90
Identity = 222/513 (43.27%), Postives = 303/513 (59.06%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADS-LHLSLNRKDELQGSSP 60
           MKLRLRSVESKET+++EVP+   ++ LK+TL+ ALSSS S+ S LH SLNRKDEL  SS 
Sbjct: 1   MKLRLRSVESKETVKLEVPNDCNLQQLKETLILALSSSSSSSSSLHFSLNRKDELLSSSL 60

Query: 61  EDSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQASSQDSSS------------SRPGKEI 120
           +DSL S GITSGDL++FT KP G  S    + Q + Q+S S                KEI
Sbjct: 61  QDSLQSLGITSGDLIYFTQKPDGLFSPSQQTQQRTFQESESFAQENAAQLNIKEPSSKEI 120

Query: 121 Q--------GIDCDIKKPRLENS-MPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDV 180
           +        G++C  ++   ++S + E+ +     +    G  +E+ + +   D  ++  
Sbjct: 121 EISEELEVIGLNCSNQETSFQDSSIKETRQGLPAVSNTQFGETLENDQGYARGDDMDVGT 180

Query: 181 EEDPIVDVVKKCSRPIFLRRVLKEE-LGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSE 240
           E   +    K+ S P FL+RVL EE    D + +KLL  A+HAV LESGFV  D   G  
Sbjct: 181 ESADVDVKSKRISEPCFLKRVLGEEDFAVDFSDNKLLFIAIHAVFLESGFVGFDSVSGLR 240

Query: 241 DNPFRMPEDWPSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCS 300
            + F + ++ P  +FT S+ YTLP+LL  ++    + + V+LKFQ+LG FVNVYGS+  S
Sbjct: 241 VDLFHLLQEQPLMNFTTSVSYTLPELLDNDN----VIDSVVLKFQTLGQFVNVYGSVAKS 300

Query: 301 RGSSVYRISLDERKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLI 360
           R S VYR  LD+ ++ P +  IW+    S    E     +  VFELWK+VKD LALPLLI
Sbjct: 301 R-SLVYRSCLDKCRYVPAIGSIWITWDKSDTAYENNSYTENVVFELWKIVKDHLALPLLI 360

Query: 361 DLCEKTGLPTPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTE 420
           DLCEKTGL  P   M LPAD+K KILE+LPG+ IAR+ CVC E+ YL+SSN+LWK K+ E
Sbjct: 361 DLCEKTGLVLPPCLMRLPADIKHKILESLPGIAIARMACVCKEMQYLSSSNDLWKQKYGE 420

Query: 421 EFGSEDSVSGKRLWKSQFVARYENEKLRSRRTNHVRDFLSLGWPVRRPPYPFPAPH---- 480
           EFGS         WK +F + +EN K R +R+      ++    +R  PY F  P     
Sbjct: 421 EFGSGTLQQEMVNWKVKFASSWENRKKRRKRSFVRPTPVNF---IRSEPYRFMVPPQIGS 480

Query: 481 --VIGGDYDIVPSIRL-PTHGIPGQSLRWTPRR 484
             +IGGDYD +P + + P  G PG++LR   RR
Sbjct: 481 RIIIGGDYDRLPGLGVPPPFGQPGRNLRNIVRR 505

[Close]
BLAST of CmoCh16G003250 vs. TrEMBL
Match: A0A0D2TV86_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G052000 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.7e-87
Identity = 204/480 (42.50%), Postives = 279/480 (58.13%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSA-DSLHLSLNRKDELQGSSP 60
           MKLRLR+ ES+ETLRI++P   +   L++TL  +L        SL   LN  D L   SP
Sbjct: 1   MKLRLRNHESRETLRIQLPSPCSFLQLQETLSLSLPPPHPPPSSLRFYLNDNDLLLPPSP 60

Query: 61  EDSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQASSQDSSSSRPGKEIQGIDCDIKKPRL 120
             SLHS G+ +GDL++F+  P+ FS+     +  +  D  +  P       D +  +   
Sbjct: 61  HSSLHSLGVVAGDLLYFSSNPTAFSA-----VSVTQMDDRNQVP-------DNNNNQETQ 120

Query: 121 ENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKKCSRPIFLRRV 180
              +P+  E  S D E +                E MD++   + +   + S P FLR+V
Sbjct: 121 MQELPQFEEPMSQDPEFSA---------------ETMDIDASALSE---RLSEPYFLRKV 180

Query: 181 LKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTMSLWYT 240
           L EELG     HKLL  +VHAVLLESGFV IDP  G   + F  P+++PSP   +S  Y+
Sbjct: 181 LGEELGDSGCIHKLLAISVHAVLLESGFVGIDPISGLRTDRFHWPDEFPSP---VSFHYS 240

Query: 241 LPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDERKFAPNLDLI 300
           LP+LL      S +T+ V LKFQ+LGHF  VYGSL   +GSS+Y++SLDE +FAP L+L+
Sbjct: 241 LPELLR-----SNLTDYVALKFQTLGHFFQVYGSL--FKGSSLYKLSLDETRFAPTLNLV 300

Query: 301 WVDSVSSYIMDEKEGD-----PDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFMLL 360
           W +   +  MD+K+       P+ +VFE WK+VKD LALPLLIDLC+KTGL  P   + L
Sbjct: 301 WENCDKNVAMDDKKDGSFVSYPESEVFEFWKIVKDGLALPLLIDLCDKTGLALPVCLIRL 360

Query: 361 PADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVSGKRLWKSQ 420
           PA+LK+KILE+LPG DIAR+ECVC+E+ YLAS+N+LWK KF EEFG          WK  
Sbjct: 361 PAELKVKILESLPGADIARMECVCSEMRYLASNNDLWKQKFKEEFGCTSGTVAMGNWKKM 420

Query: 421 FVARYENEKLRSRRTNHVRDFL-----SLGWPVRRPPYP----FPAPHVIGGDYDIVPSI 466
           F++ +E+ K R+R     + F       L +P+ R P P    F  PHVIGG++D  P +
Sbjct: 421 FISCWESRKKRNRAITRWQGFARVDNRPLYFPIWRDPNPFFPSFGVPHVIGGEHDASPFV 440

[Close]
BLAST of CmoCh16G003250 vs. TAIR10
Match: AT1G23780.1 (AT1G23780.1 F-box family protein)

HSP 1 Score: 236.5 bits (602), Expect = 3.5e-62
Identity = 191/516 (37.02%), Postives = 274/516 (53.10%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLR  E++ETL++E+ D  T+  L++ +   + SS     +HLSLNRKDEL   SPE
Sbjct: 1   MKLRLRHHETRETLKLELADADTLHDLRRRINPTVPSS-----VHLSLNRKDELITPSPE 60

Query: 61  DSLHSTGITSGDLVFFTFKP---SGFSSRGGTSIQASSQDSSSSRPGKEIQGIDCDIKKP 120
           D+L S G+ SGDL++F+ +    S +  R   ++ AS  +S+ +     I   + D+   
Sbjct: 61  DTLRSLGLISGDLIYFSLEAGESSNWKLRDSETV-ASQSESNQTSVHDSIGFAEVDVVPD 120

Query: 121 RLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKKCSRPIFLR 180
           + +++   S+E    D E    GM E  E     D E++D+E        K+ S P FL+
Sbjct: 121 QAKSNPNTSVE----DPEGDISGM-EGPEPM---DVEQLDMELAAAGS--KRLSEPFFLK 180

Query: 181 RVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTMSLW 240
            +L E+ G D +    L  +VHAV+LESGFVL+  N GS+   F           T+SL 
Sbjct: 181 NILLEKSG-DTSELTTLALSVHAVMLESGFVLL--NHGSDKFNFS------KELLTVSLR 240

Query: 241 YTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDERKFAPNLD 300
           YTLP+L+  +D ++   E V +KFQ+LG  V VYG++  S G     ++LD+R+F P +D
Sbjct: 241 YTLPELIKSKDTNTI--ESVSVKFQNLGPVVVVYGTVGGSSGR--VHMNLDKRRFVPVID 300

Query: 301 LIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFMLLPAD 360
           L+   S S    +E      ++VF  W++VKD L +PLLI +C+K GL  P   M LP +
Sbjct: 301 LVMDTSTSD---EEGSSSIYREVFMFWRMVKDRLVIPLLIGICDKAGLEPPPCLMRLPTE 360

Query: 361 LKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFG------SEDSVSGKRLW 420
           LK+KILE LPGV I  + CVCTE+ YLAS N+LWK K  EE        + DSV+    W
Sbjct: 361 LKLKILELLPGVSIGNMACVCTEMRYLASDNDLWKQKCLEEVNNFVVTEAGDSVN----W 420

Query: 421 KSQFVARYENEKLRS------RRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSI 480
           K++F   +  ++L +      R+    R  +S G    R    FP    I GD       
Sbjct: 421 KARFATFWRQKQLAAASDTFWRQNQLGRRNISTG----RSGIRFPR---IIGDPPFTWFN 473

Query: 481 RLPTHGI----PGQSLRWTPRRR--QVFIPHYDLIG 496
               HG     PGQS R   RR   Q+F P  +L G
Sbjct: 481 GDRMHGSIGIHPGQSARGLGRRTWGQLFTPRCNLGG 473

[Close]
BLAST of CmoCh16G003250 vs. TAIR10
Match: AT1G23770.1 (AT1G23770.1 F-box family protein)

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-43
Identity = 111/263 (42.21%), Postives = 161/263 (61.22%), Query Frame = 1 

Query: 168 KKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDW 227
           K+ S P FL+ VL E+ G D +    L  +VHAV+LESGFVL+D   GS+   F      
Sbjct: 41  KRLSEPFFLKNVLLEKSG-DTSDLTALALSVHAVMLESGFVLLDH--GSDKFSFS----- 100

Query: 228 PSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSL--NCSRGSSVYRI 287
                ++SL YTLP+L+ ++D ++   E V ++FQ++G  + VYG+L  +C R   V+  
Sbjct: 101 -KKLLSVSLRYTLPELITRKDTNTV--ESVTVRFQNIGPRLVVYGTLGGSCKR---VHMT 160

Query: 288 SLDERKFAPNLDLIWVDSVSSYIMDEKEGDPD--KQVFELWKLVKDALALPLLIDLCEKT 347
           SLD+ +F P +DL+ VD++      EK+G     ++VF LW++VKD L +PLLI LC+K 
Sbjct: 161 SLDKSRFLPVIDLV-VDTLKF----EKQGSSSYYREVFMLWRMVKDELVIPLLIGLCDKA 220

Query: 348 GLPTPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGS-- 407
           GL +P   MLLP +LK+KILE LPGV I  + CVCTE+ YLAS N+LW+ K  EE     
Sbjct: 221 GLESPPCLMLLPTELKLKILELLPGVSIGYMACVCTEMRYLASDNDLWEHKCLEEGKGCL 280

Query: 408 EDSVSGKRLWKSQFVARYENEKL 425
               +G   WK +F + +  ++L
Sbjct: 281 WKLYTGDVDWKRKFASFWRRKRL 284

[Close]
BLAST of CmoCh16G003250 vs. TAIR10
Match: AT1G70360.1 (AT1G70360.1 F-box family protein)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-22
Identity = 75/199 (37.69%), Postives = 108/199 (54.27%), Query Frame = 1 

Query: 193 LLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTMSLWYTLPKLLAKEDKSST 252
           +++  VHAV+LESGFVL DP     D+  R      S    +SL YTLP +         
Sbjct: 12  IVIMTVHAVMLESGFVLFDP-----DSSMRFSF---SKKTLVSLNYTLPSVKG------- 71

Query: 253 MTEVVLLKFQS---LGHFVNVYGSLNCSRGSSVYRISLDERKFAPNLDLIWVDSVSSYIM 312
              +V L F+    +G FV V              +S+D+R +   +DL+ ++++ S   
Sbjct: 72  ---IVGLNFEKEAIVGSFVRV--------------VSIDKRSYVHIVDLL-METLKS--- 131

Query: 313 DEKEG--DPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFMLLPADLKMKILEALP 372
           DE+E     D +V   W+++KD +  PLL+DLC KTGL  P  F+ LP +LK KILE+LP
Sbjct: 132 DEEEDTLSIDCKVLVWWRMIKDGIVTPLLVDLCYKTGLELPPCFISLPRELKHKILESLP 174

Query: 373 GVDIARVECVCTELLYLAS 387
           GVDI  + CV +EL  +AS
Sbjct: 192 GVDIGTLACVSSELRDMAS 174

[Close]
BLAST of CmoCh16G003250 vs. NCBI nr
Match: gi|659108851|ref|XP_008454420.1| (PREDICTED: F-box protein SKIP22-like [Cucumis melo])

HSP 1 Score: 762.3 bits (1967), Expect = 5.2e-217
Identity = 398/510 (78.04%), Postives = 435/510 (85.29%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLRS+ESK+TLRIEVPD ST+ HLKQTLLQ LSSSFSADSLHLSLNRKDELQ SSPE
Sbjct: 1   MKLRLRSLESKQTLRIEVPDPSTLNHLKQTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSTGITSGDLVFFTFKPSGFSSRGG--TSIQA---------SSQDSSSSRP---GKE 120
           DSLHS GITSGDLVFFTFKPS FSS G   T IQ+         SS  SSSS P   GK+
Sbjct: 61  DSLHSLGITSGDLVFFTFKPSEFSSLGARATPIQSFQPPPLSGSSSLVSSSSLPQVKGKQ 120

Query: 121 IQGIDCDIKKPRLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDV 180
           + GIDCD+KKPRLENS PES+   S  AE+TT  M+E      ESDCEEM+VEE+P V V
Sbjct: 121 LLGIDCDLKKPRLENSEPESMVPDSSGAELTTSSMIE------ESDCEEMEVEEEPTVVV 180

Query: 181 VKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPED 240
            KKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLI+PNLG ED+PFRMPED
Sbjct: 181 EKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFEDSPFRMPED 240

Query: 241 WPSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRIS 300
           WPSPSFTMSLWYTLP+LL K  K+STMTEVVLLKFQSLG+FVNVYGSLNCSRGSSVYR+S
Sbjct: 241 WPSPSFTMSLWYTLPELLTKRGKNSTMTEVVLLKFQSLGYFVNVYGSLNCSRGSSVYRVS 300

Query: 301 LDERKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLP 360
           LDERKFAPNLDLIWVDSVS+YIMDEKEG+P+KQVFE WK+VKDALALPLLID+CEKTGLP
Sbjct: 301 LDERKFAPNLDLIWVDSVSNYIMDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLP 360

Query: 361 TPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVS 420
            PASFMLLPAD+K+KILEALPGVDIARVECVCTEL YLASSNELWKMKF +EFG ED VS
Sbjct: 361 PPASFMLLPADVKLKILEALPGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVS 420

Query: 421 GKRLWKSQFVARYENEKLRSRRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSIR 480
           G R+WK++FV  YE EK R+RRT+++RD +S G   RRPPYPFP PH+IGGDYDIV  IR
Sbjct: 421 GNRVWKTKFVEYYEREKQRNRRTSNMRDAISFG-RHRRPPYPFPVPHIIGGDYDIVSGIR 480

Query: 481 LPTHGIPGQSLRWTPRRRQVFIPHYDLIGR 497
           LP +G+PGQSL   PRR  V IPHYDL GR
Sbjct: 481 LPVYGVPGQSLPRIPRRHAV-IPHYDLRGR 502

[Close]
BLAST of CmoCh16G003250 vs. NCBI nr
Match: gi|449465099|ref|XP_004150266.1| (PREDICTED: F-box protein SKIP22 [Cucumis sativus])

HSP 1 Score: 748.8 bits (1932), Expect = 6.0e-213
Identity = 385/507 (75.94%), Postives = 433/507 (85.40%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLRS+ES ++LRIEVPD ST++HLK TLLQ LSSSFSADSLHLSLNRKDELQ SSPE
Sbjct: 1   MKLRLRSLESNQSLRIEVPDPSTLDHLKHTLLQTLSSSFSADSLHLSLNRKDELQASSPE 60

Query: 61  DSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQA--------SSQDSSSSRP---GKEIQG 120
           DSLHS GITSGDL+FFTFKP  FSS G TSIQ+        SSQ SSSS P   GK++ G
Sbjct: 61  DSLHSLGITSGDLLFFTFKPPEFSSLGATSIQSFQPPLPGSSSQVSSSSLPQVEGKQLLG 120

Query: 121 IDCDIKKPRLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKK 180
           IDCD+KKPRLENS PES+  +S  AE+T   M+E      ESDCEEM+VEE+P V V  +
Sbjct: 121 IDCDLKKPRLENSEPESVVPESSSAELTACSMIE------ESDCEEMEVEEEPTVVVENR 180

Query: 181 CSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPS 240
           CSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLI+PNLG +D+PFRMPEDWPS
Sbjct: 181 CSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLINPNLGFDDSPFRMPEDWPS 240

Query: 241 PSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDE 300
           PSFTMSLWYT+P+LL K +K+STMTEVVLLKFQSLG+FVNVYGSL+ SRGSSVYR+SLDE
Sbjct: 241 PSFTMSLWYTIPELLTKREKNSTMTEVVLLKFQSLGYFVNVYGSLSYSRGSSVYRVSLDE 300

Query: 301 RKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPA 360
           RKFAPNLDLIWVDSVS+YI+DEKEG+P+KQVFE WK+VKDALALPLLID+CEKTGLP PA
Sbjct: 301 RKFAPNLDLIWVDSVSNYILDEKEGNPEKQVFEFWKIVKDALALPLLIDICEKTGLPPPA 360

Query: 361 SFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVSGKR 420
           SFMLLPAD+K+KILEAL GVDIARVECVCTEL YLASSNELWKMKF +EFG ED VSG R
Sbjct: 361 SFMLLPADVKLKILEALTGVDIARVECVCTELRYLASSNELWKMKFNQEFGLEDGVSGNR 420

Query: 421 LWKSQFVARYENEKLRSRRTNHVRDFLSLGWPVRRPPYPFPAPHVIGGDYDIVPSIRLPT 480
            WK++FV  YE EK R+RRT+++RD ++ G   RRPPYPFP PH+IGGD+DIVP IRLP 
Sbjct: 421 NWKAKFVEYYEKEKQRNRRTSNMRDLINFG-RRRRPPYPFPVPHIIGGDFDIVPGIRLPV 480

Query: 481 HGIPGQSLRWTPRRRQVFIPHYDLIGR 497
           +G+PGQSL   PRR  V IPHYDL GR
Sbjct: 481 YGVPGQSLPRIPRRHAV-IPHYDLRGR 499

[Close]
BLAST of CmoCh16G003250 vs. NCBI nr
Match: gi|297736405|emb|CBI25128.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 386.0 bits (990), Expect = 1.0e-103
Identity = 235/515 (45.63%), Postives = 313/515 (60.78%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADS--LHLSLNRKDELQGSS 60
           MKLR+RS+ESKETL+I+VPD  +++H    L  A+SSS S+ S  ++LSLNRKDELQ SS
Sbjct: 1   MKLRVRSLESKETLKIQVPDPCSLQHFIHLLSLAISSSSSSSSSIIYLSLNRKDELQVSS 60

Query: 61  PEDSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQASSQDSSSSRPGKEIQGIDCDIKKPR 120
             D+L S G+TSGDL+F++F P+ FS    T I + +  S+S R            K+  
Sbjct: 61  SLDTLQSLGVTSGDLIFYSFNPTAFSQ---TPIPSETLVSNSER------------KETL 120

Query: 121 LENSMPESIESKSLDAEMTTGGMVEDGEK------------FLESDCEEMDVEEDPIVDV 180
           LE+     +   +       G +V D +K             +E      D +++PIV V
Sbjct: 121 LESQTLAPLAQANPHEPKEYGSLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIV-V 180

Query: 181 VKKCSRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPED 240
            K  S P FLR+VL+EE+G D N HKLLV AVHAV+LESGFV  D   G   + F + E+
Sbjct: 181 KKSFSEPCFLRKVLREEVGDDGNEHKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEE 240

Query: 241 WPSPSFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRIS 300
           +P  + +MSLWYTLP+LL      S   + V LKFQ LG F+N+YGSL+ +R S+V+ +S
Sbjct: 241 YPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNR-STVHWVS 300

Query: 301 LDERKFAPNLDLIWVDSVSSYIMDEKEGD--PDKQVFELWKLVKDALALPLLIDLCEKTG 360
           LDE +FAP LDL+W  S S+   D    +  P+ +VFE WK+VKD LALPLL DLCEK G
Sbjct: 301 LDEYRFAPTLDLMWTHSDSAEEKDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGG 360

Query: 361 LPTPASFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDS 420
           L  P   M LP +LK+KILE LPGVD+ +V CVC+EL+YL+S+N+LWK KFTEEFG+   
Sbjct: 361 LLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNVRV 420

Query: 421 VSGKRLWKSQFVARYENEKLRSRRTNHVRDFLSLG----WPVRRPPYPFPAPHVIGGDYD 480
             G  LWK +F   +EN K R R +     F SL     +P+RR P PF  P  IGGDYD
Sbjct: 421 GQGFSLWKDKFATWWENRKKRKRVSGMCTWFPSLEAPSYFPIRRDPNPFAIPPTIGGDYD 480

Query: 481 IVPSIRLPT-HGIPGQSLRWTPRRRQVFIPHYDLI 495
             P++ +P+  G PG+        R   IP +D +
Sbjct: 481 HFPALGIPSPFGQPGRRYHRFLAPRNT-IPRFDFL 497

[Close]
BLAST of CmoCh16G003250 vs. NCBI nr
Match: gi|645261365|ref|XP_008236258.1| (PREDICTED: F-box protein SKIP22-like [Prunus mume])

HSP 1 Score: 354.4 bits (908), Expect = 3.3e-94
Identity = 228/511 (44.62%), Postives = 312/511 (61.06%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLR+RS+E+KETLR+EVP+  ++  LK T+ Q +S+S S  SL LSLNR+DEL  SSP 
Sbjct: 1   MKLRVRSIETKETLRVEVPNLCSLHQLKLTISQLISASPS--SLRLSLNRRDELHASSPG 60

Query: 61  DSLHSTGITSGDLVFFTFKPSGFS------SRGGTSIQASSQDSSSSRPGKEIQGIDCDI 120
           DSLHS G+TSGDL+F+T  PS  +      S   +S+Q+ +Q+ ++  P    QG   + 
Sbjct: 61  DSLHSLGLTSGDLIFYTVDPSSQTLAPPPHSISHSSVQSHNQNLTTGVP----QG--SNF 120

Query: 121 KKPRLENSMPESIESKSLDAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKKCSRPI 180
           + P  E  + E   +  L AE     +V + E  + S  E M++++      +KK S P 
Sbjct: 121 QNP--ETLIGEGSAAGDLIAEEQRS-LVSNSETLVASGPESMEIDDGSDGIGLKKYSVPF 180

Query: 181 FLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSPSFTM 240
           FL+RVL+EELG DR+ HKLLV AVHA +LESGFV  D   G   N F + ++WP  + TM
Sbjct: 181 FLKRVLREELGEDRSNHKLLVIAVHAAVLESGFVGFDSVSGMGSNRFHLADEWPRTAITM 240

Query: 241 SLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSLNCSRGSSVYRISLDERKFAP 300
           S+ YTLP++L     +    E V+LKFQSLG FVNVYGSL  S G+  YR+ LDER+F P
Sbjct: 241 SISYTLPEILKNRGNNGNGVEGVMLKFQSLGRFVNVYGSL-ASGGAGPYRVCLDERRFGP 300

Query: 301 NLDLIWVDSVSSYIMDEKEG-DPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPASFML 360
            ++ +W     +  ++E++G   +++VFE WK+VKD + LPLLIDLC K GLPTP S M 
Sbjct: 301 IIESVW----ENRNVNERDGLVSEREVFEFWKIVKDGITLPLLIDLCAKAGLPTPPSLMR 360

Query: 361 LPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVSGKRL-WK 420
           LP +LKMK+LE L GVDIA+V  VC EL  LA+++ELWK K+ EEFGS     G  + WK
Sbjct: 361 LPPELKMKVLEPLSGVDIAKVGGVCKELRNLANNDELWKKKYAEEFGSGTGGEGTMINWK 420

Query: 421 SQFVARYENEKLRSRRTNHVRDFLSLGW-PVRRPPYPF---PAPHVIGGDYDIVPSI-RL 480
            +F   +E  + + +   H R +    +  +RR P P    P   +IGGDYD  P    L
Sbjct: 421 HKFARNWEIAEQQRKAVGHWRSYERPYFNRIRRDPNPLFVPPVTGIIGGDYDRFPVFGAL 480

Query: 481 PTHGIPGQSLRWTPRR---RQVFIPHYDLIG 496
              G P   L+  PRR   R+ F P+ +L G
Sbjct: 481 NPTGQPHPILQ-PPRRFPARRNFSPNCNLEG 494

[Close]
BLAST of CmoCh16G003250 vs. NCBI nr
Match: gi|470106826|ref|XP_004289759.1| (PREDICTED: F-box protein SKIP22-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91
Identity = 219/514 (42.61%), Postives = 300/514 (58.37%), Query Frame = 1 

Query: 1   MKLRLRSVESKETLRIEVPDQSTIEHLKQTLLQALSSSFSADSLHLSLNRKDELQGSSPE 60
           MKLRLRS+E+KETLR+EVP+  ++ HLKQ+L Q++S++ S+ SL LSLNR+DEL  SSP+
Sbjct: 1   MKLRLRSLETKETLRLEVPNLCSLNHLKQSLSQSISAAPSS-SLRLSLNRRDELLASSPD 60

Query: 61  DSLHSTGITSGDLVFFTFKPSGFSSRGGTSIQASSQDSSSSRPGKEIQGIDCDIKKPRLE 120
            SL S G+TSGDL+F++    G  +  G +     +  S +  G++    +   + P  +
Sbjct: 61  ASLASLGVTSGDLIFYSQTLIGDGASTGEATAEDPRSGSETVIGED----EALAEDPSFD 120

Query: 121 NSMPESI-ESKSL---------DAEMTTGGMVEDGEKFLESDCEEMDVEEDPIVDVVKKC 180
           + M   I E  S+         D +    G     E  +      M+++E+    V KK 
Sbjct: 121 SGMETLIGEGASIAGDARYAVSDTQTLMDGSNSISETLIGEGSSGMEIDEESSGVVRKKY 180

Query: 181 SRPIFLRRVLKEELGYDRNAHKLLVTAVHAVLLESGFVLIDPNLGSEDNPFRMPEDWPSP 240
           S P FLRRV++EEL  DR+ HKLLV A+HAVL ES FV  D   G+  +   +P++WP+ 
Sbjct: 181 SVPFFLRRVMREELAEDRSDHKLLVIALHAVLSESRFVRFDSVSGARADRCHLPKEWPAV 240

Query: 241 SFTMSLWYTLPKLLAKEDKSSTMTEVVLLKFQSLGHFVNVYGSL-NCSRGSSVYRISLDE 300
           ++T+SL YTLP++L   D      E V+LK Q+LG FVNVYGSL    RGS  YR+SLD 
Sbjct: 241 AYTLSLSYTLPEILQNRDNGGGGVEAVVLKIQTLGRFVNVYGSLAGGGRGSGPYRVSLDV 300

Query: 301 RKFAPNLDLIWVDSVSSYIMDEKEGDPDKQVFELWKLVKDALALPLLIDLCEKTGLPTPA 360
            +FAP LD +W    S  + D +   P+ ++FE W++VKD +  PLLIDLCEK GLP P 
Sbjct: 301 ERFAPMLDFVWG---SRNVSDSEVFVPEIEIFEFWRIVKDGITYPLLIDLCEKAGLPEPP 360

Query: 361 SFMLLPADLKMKILEALPGVDIARVECVCTELLYLASSNELWKMKFTEEFGSEDSVSGKR 420
           SFM LP D+KM ILE L G DIA+V C C EL  LA+++ELWK KF EEFGS     G  
Sbjct: 361 SFMCLPLDVKMNILERLSGADIAKVGCACKELQNLANNDELWKQKFLEEFGS--GAGGTG 420

Query: 421 LWKSQFVARYENEKLRSRRTNHVRDFLSLGW-PVRRPPYPFPA--PHVIG-----GDYDI 480
            WK +F  ++E  + + +     RD    G+ P+RR P PF    P +IG     G  D 
Sbjct: 421 NWKFRFAGKWEYREQQKKALVMWRDHNRPGFIPMRREPIPFAPGFPGIIGDPPGFGVPDP 480

Query: 481 VPSIRLPTHGIPGQSLRWTPRRRQVFIPHYDLIG 496
               RLP     GQ + +   RR  F P+ +L G
Sbjct: 481 FRRPRLPYPFGGGQPVIFRHGRRNTFSPNCNLGG 504

The following BLAST results are available for this feature:
BLAST of CmoCh16G003250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKI22_ARATH6.3e-6137.02F-box protein SKIP22 OS=Arabidopsis thaliana GN=SKIP22 PE=1 SV=1[more]
FB17_ARATH2.9e-4242.21Putative F-box protein At1g23770 OS=Arabidopsis thaliana GN=At1g23770 PE=3 SV=1[more]
FB81_ARATH3.7e-2137.69F-box protein At1g70360 OS=Arabidopsis thaliana GN=At1g70360 PE=2 SV=1[more]
BLAST of CmoCh16G003250 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBH4_CUCME3.7e-21778.04F-box family protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KT22_CUCSA4.2e-21375.94Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000590 PE=4 SV=1[more]
A0A061E8A5_THECC1.8e-9143.26F-box family protein, putative OS=Theobroma cacao GN=TCM_007263 PE=4 SV=1[more]
B9S7Z0_RICCO5.9e-9043.27Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1382940 PE=4 SV=1[more]
A0A0D2TV86_GOSRA2.7e-8742.50Uncharacterized protein OS=Gossypium raimondii GN=B456_013G052000 PE=4 SV=1[more]
BLAST of CmoCh16G003250 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G23780.13.5e-6237.02 F-box family protein[more]
AT1G23770.11.6e-4342.21 F-box family protein[more]
AT1G70360.12.1e-2237.69 F-box family protein[more]
BLAST of CmoCh16G003250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108851|ref|XP_008454420.1|5.2e-21778.04PREDICTED: F-box protein SKIP22-like [Cucumis melo][more]
gi|449465099|ref|XP_004150266.1|6.0e-21375.94PREDICTED: F-box protein SKIP22 [Cucumis sativus][more]
gi|297736405|emb|CBI25128.3|1.0e-10345.63unnamed protein product [Vitis vinifera][more]
gi|645261365|ref|XP_008236258.1|3.3e-9444.62PREDICTED: F-box protein SKIP22-like [Prunus mume][more]
gi|470106826|ref|XP_004289759.1|2.0e-9142.61PREDICTED: F-box protein SKIP22-like [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR001810F-box_dom
IPR024682Npl4_Ub-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G003250.1CmoCh16G003250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 1..83
score: 8
IPR001810F-box domainPROFILEPS50181FBOXcoord: 348..394
score: 10
IPR001810F-box domainunknownSSF81383F-box domaincoord: 345..419
score: 1.31
IPR024682Nuclear pore localisation protein Npl4, ubiquitin-like domainPFAMPF11543UN_NPL4coord: 10..76
score: 8.
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 352..428
score: 8.7
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..81
score: 1.
NoneNo IPR availablePANTHERPTHR15537FAMILY NOT NAMEDcoord: 2..493
score: 7.6
NoneNo IPR availablePANTHERPTHR15537:SF2F-BOX ONLY PROTEIN 7coord: 2..493
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G003250Cucsa.298500Cucumber (Gy14) v1cgycmoB0818
CmoCh16G003250CmaCh16G003060Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G003250CmaCh04G004320Cucurbita maxima (Rimu)cmacmoB701
CmoCh16G003250Cla006455Watermelon (97103) v1cmowmB287
CmoCh16G003250Csa4G000590Cucumber (Chinese Long) v2cmocuB322
CmoCh16G003250MELO3C018024Melon (DHL92) v3.5.1cmomeB298
CmoCh16G003250ClCG10G010030Watermelon (Charleston Gray)cmowcgB273
CmoCh16G003250CSPI04G00100Wild cucumber (PI 183967)cmocpiB329
CmoCh16G003250Lsi03G010070Bottle gourd (USVL1VR-Ls)cmolsiB294
CmoCh16G003250Cp4.1LG14g04500Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G003250Cp4.1LG01g02760Cucurbita pepo (Zucchini)cmocpeB311
CmoCh16G003250MELO3C018024.2Melon (DHL92) v3.6.1cmomedB342
CmoCh16G003250CsaV3_4G000070Cucumber (Chinese Long) v3cmocucB0385
CmoCh16G003250Cla97C10G193040Watermelon (97103) v2cmowmbB316
CmoCh16G003250Bhi11G000913Wax gourdcmowgoB0405
CmoCh16G003250CsGy4G000110Cucumber (Gy14) v2cgybcmoB465
CmoCh16G003250Carg08106Silver-seed gourdcarcmoB0509
CmoCh16G003250Carg19699Silver-seed gourdcarcmoB0402
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G003250CmoCh04G004630Cucurbita moschata (Rifu)cmocmoB286
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G003250Cucumber (Chinese Long) v3cmocucB0409
CmoCh16G003250Cucurbita moschata (Rifu)cmocmoB096
CmoCh16G003250Cucumber (Gy14) v1cgycmoB0625
CmoCh16G003250Cucurbita maxima (Rimu)cmacmoB133
CmoCh16G003250Cucurbita maxima (Rimu)cmacmoB502
CmoCh16G003250Wild cucumber (PI 183967)cmocpiB344
CmoCh16G003250Cucumber (Chinese Long) v2cmocuB338
CmoCh16G003250Melon (DHL92) v3.5.1cmomeB280
CmoCh16G003250Cucurbita pepo (Zucchini)cmocpeB321
CmoCh16G003250Melon (DHL92) v3.6.1cmomedB317