CmoCh16G003080 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTGACGCACCGGAACGACCCCTTCTGCATTGGAAAATTTTTGCATTTAATAAAGCAAAGAGAAGCATAGTAGTTAGTTACATGGCAGAGTAAAGCGAAGGACAGTCACGTGCGGAGGATGGTCCTGATCCAGAGTCCACACAGTTGGCGAATACGCCAATTCCCCAAAAGCCAATAAACAAATCTCGAACACAAAGGGCGCCCAAATTCGCCATCGCAGCGACATGACAATCAGTGGCATCGTCGCCTTTAATATTGATATTCGGATCATATCACCCACTGGTCAAACGCAGACTCCATTTCTTTCAAAACCCGTCAAGTCTCTCCTCTTCCCCACCTCCATTTCGACCTCAATTCAGCCACCTCTTGCTGCTCGTTGCTCCTCCTCCTCCTCCGTCTCTCCTCTCGGTTAGCTTCCGTTTCCGTGATACTAACCTGTTTGATTCTTGTTTTTTAATCTATCTTTTTTGAGTTTTTGCTTAGTGGATTCATGGAATCGTTGGGTTTTCGTGGCGTACTGGCATTTATTATGGTCTATGATTTGTTTTTGCGTATTGTGTTGATTTTCTTCATTAAAGCGGTCACTCGGGTTGGATTAATGTTGATTACGTGTTGGGGTTTGATTTTGCGTTGCCGTGTTGTAATAGCTGTTGCAGTGATCAGACAAGGAAAATGGAATCAATCATTACGTTTGTGGTAGTGACGTCTATAGACTGTTTTTGGCTTTCTCAAATTGCATCATTCTCCAGGAAGGTTTCTCATAAAATTAGTTGTTCAGCTGAGTTAACATTTAAGAGGTTTGTCGTCAATCATGTTACACTCCCGTTCATTGTATCCCTCTCCGTCGGTCTGAGAGGGGATGGAGAAGGAAACGAAGCATTCTTTATGAGAGTAGGAATAAGAGAAGGGAACAAAACATTTCTTCTAAGAGTGTGGAAACATCTCCTTGAGAGACCTGACTTAAAACCTTGAACTTAACTTTTGATTGTTTTTAGTCTTTGGTTGGCTCTGAAGCTAGTATTGTTATTCTTTTGCAGATATGGACAACGGTGCAGGTCTCAGTTTGTATCCACTACATCGATGCAAAACAATTCACCTGGTCAGTATCAAATTTGAAAATTTCTTGGTTTTATATCAAATGAGTATTGCAGATGTGAAGCAGGTTGTATTTGACTTGAAGGGCATTCAAGATGGCCTTCTTTCTTGGCTTTTGCTCGCAAATCAAGGGCTCTTATAAAACAATGCATCCAGGTCAGGCATGCGCAAGGAATCCACAATGTTGATGGAGATAAGAGCTATAAAGCATATATGCGTCCTGAATTTTTTGATGCCCACATTACTCAGCTTGGATGGCAGCAGGTCAGGACGGGAGTTGTAAAAATTTAAATTGTAAAGAAGATAAAAGTAGAGTTAATTGGGAGAAAATTACTGATATGATATCTTTCAACTGTCACAGATTGATAATTTGCGTAAGCATGTTCATGCATCTGGTCTTTCCAGGAAGATTGAATTGGTAGTAACATCCCCTTTGCTCAGGTATGAATGTCATTATCTGCAGTTAACACTCTTTTATATACAACTTTATGTGTAAAACCTCCCCGTCATTTCTCGTTTCATGATGTTGACTCTCATTGTTGGCCTCACCAATATTTTAAAAAGAGGAGATCAATAAGGGTAGGAACATTAAACGATATCTTGTTACAGCAAAGGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCTTTTTGGGTTTTCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGATTTCCAGGGGCGTTTTGTTCTCTTCCCAACCGATGTGGGATCTCACAATCTATCTCCCTTCGAGGTCCACCGTCCTCGTTGACACTCATTTCTTTCTCCAATCGATGTGGGACCCCCAGCAAATCCACTCCCCTTCGGGGCCCAGCATCCTTGGTGGCACAACGCCTCGTGTTTACCCCTAAGCATGTGGGACCCCCACCAAATCCATCCCCCTACGGGGCCCAGCGTCTTTGCTGGCACACCGCCTCGTGTTTACCCCCTTCGGGGCTCAGCCTCCTCGCTGCCACATTGGCTAGTGTCTGGTTCTTATACCATTTGTAACGGCTTAGACCCACCTCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTTCTCTCAAGGTTTTTAAAACGTGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGGATGTTCCGTTCTCCTCCCCAACCAACGTGGGATCTCACAAAATTCTTGTTTGTAACCAATATTAGTAGTCTTGGAAGAAACTTACCTTTTCATGGTTTGACAAGTTCAGTCACACACCCATACATACTTTCTTCTTGGGTAGTAATAACCGTTGAATTCAACTGAGATAGTTTGCCTTTGATGATGATTATGTGAGACATGCAATTCCCACGATTTACTTGACTACCAAGTCTCAGTAGTCCCTAATTTAGATCAATTTAACTCAGAGAGATTGGAGAAGGAATAAAAGGTTTTTAATTACTGAAGAAGAAGCTGAAAGATCAAAAAGAGGAGAGTTGAACGTGTTTGTTCCACTTCAAGTGCAAAGTAGATACTTGAACGTTTTGAGTTCCTCAAAATACAGTTTTTTTCCTTTTCAATGCTTATTTTAATTGTTATTTCATGTTTACTTTGCTGGGAAGTCGATAGTAACCCAAGTTAGATATCTAAGGAATCATATACCAATATGGAAAATCTGAAGATTTTTTCTTATGGTTGATTATTTTCTAGGACTCTACAAACCGCTGTTGGAGTATTTGGTGGTGAAGGCTATACAACTGGAATGGACGTGCTGCCACTAATGATTGCAAATGCAGGCAATAGTGCACGAGCTGCAATTTCAAGTCTAAACTGCCCACCTATTGCTGCTGTTGAGCTTTGTCGTGAACATTTGGTATGTGTTAGATAAATTTGATTCTTCTCAGTTATGTTTATGTATGCTGCAACAGGTGGGTGTTAGATTGCTTCATGATTTAGAATGTAAATGACTTAAATCTGGGCTGGGGGTTAGTTAACTTTACTGATACATGCAGTCTTTTGTATGAGTCTGTTATTCAATGCTATCGATATTAGAAATCCACTAATGCACCTCATATGCAAGTATGTCGAGGAAATTTTTTTATTTTCTTCCTATTTTTGCACGATGCAGTGTCAAGTATAAAGTTCGGGTCCTCCCAATCGTTCATCGATTTCTAATTTATTATACCTTCGTTCTCCCCCTTTTTCTTCTGAGGGAGCTATTTAGCAGAGACTTATTGTTTTCGTTATATATTATATTTGTAGTTCTTATATGTGTTCTATATCTAACAGGGAGTTCATCCTTGTGACAAGAGGAGAAACATCAGCGACTATCAATTCCTCTTTCCTGCAGTCGATTTTTCACTGGCAAGTACCTGGGATGTTATAATGAGCTGTGGGAAATTTGTTGTTTATAATCTTTTTAGGAAACTTTTCATTCAAGAAAATGTAACAATGGTGGATGAGTTGTGTTGTTGATTAACACTCAAAAGTTCCATGCAGATAGAAAGTGACGAGGATGTATTGTGGAAGGCTGACATTAGAGAGACAAAAGAAGAGCTGGCAGCCAGAGGCTTGCAATTCCTGAATTGGTGAATATTTTGTTTATTAGACTTTCGTGTTTTTTTACTTTGATTTCTTTAGGATGCCCTGCTGATATAAAAAAATGTGAGCACGAGGAAATGTTTGCGTACCGCTTGCATATCTCAAAGTCTATTTAAATGAAGGACACTCCAGAATTAAGCCATTGCTATGAAATTTCGTCGGCTATCTGTTTACCACAAGTCACCGATACATGATGTGGTTTTCAGTGGTCTTAAATCTGAAGATGATTAGTGTTTTAGTTACAAAATCTTGACTCATTTGGAGGCCGGATTGAATAGCTTTTAGTGTGCAACCTACAGTTTTTTTATACCTAGCTGCACTCGACAGTTATCATCTTCATTGTTCCTGTTTATAAGCAACTAGGGACTTTTATGTACTTGAGATTGATTACAAAACCTCGAGTCCGGGGTCGGGCATGGACCTTATAATGAACAACAAAGCGTCCCCCGTTTATCCAGGATATTCCTTTGTTCATGCTGACTGATAACTGGAGTCTTCTTCTGTAACTGGTGTTGAGATTTTCTGCTCTGGTTTTAGCTTCTCTTGTTAGGCTTGTTTTTCTATGAATGAAAATATCATACGGATAGAATTTGGTTTTGTTTTTACTCCAAAGATAGATAAAACACAATAGAACAAAACTATTCCACTGATATCACCTTGTTTGTTAATCTGGTATAGCTTTTTTTCTCCTTTCTTGCAGGTTGTGGACAAGGAAGGAGAAGGAGATAGCCGTTGTTACTCATAGTGGATTTTTGTTTCATACTCTAACTGCGTTTGGAAATGACTGTCACCCTTCGGTGAAAAAGGAAATATGCACACAGTTAGTGAACCCAATACACCTCTACCTCGAAACTATTCGATATATTTAAATTTCATCGACACTGACTTTTGCGTTAATCGTAACCTTTAGCGTGTCGTGTATGCTGCTCTCGTATTCTCATTAAGATGTCAGACTGTCAGTCCTCTATCAGATGCCTTTGGCTTGGTTATGTTTAAACCAACAATAACAGAAAATGCATGTTCTTTCTTGGTTATGTTTACATTCACTAATTTCATTTTCGGCTTGGTTACATTGGCGGGCTCTCGATTAGGGAACGTTTGAATGCATCGACTCTGCAATGATGTGTGCAATGTCTACTTGCAGATTTGCAAATTGCGAGCTTCGATCCATTGTCATAGTAGATAGAAGGTGAGTTTTGTTTATGAGCTTTTGTAGACTTGAAAGAAAATTCCTTTTCCTGATCATCACGTTTCTCGTGCTGCCAGTATGGTCGGGTCGGATTCCTCGACAACTAATTATCCTGGAAAGATACCTCCGGGGCTGGATATCCCTAGTGATGCTGTGGATGACAAAAGCATGAAGGAAGAGAAACAACCAGTCGATTCTGAACCGAAGGAACATGAAAATATGTAAGTCTTATACGGCTATAGATAGAGAGATATTCAAATGTTGAGTGTCATTTATACAAACAAGTATTTTTGAAACTGCCTTATCTAGACACAGCACAACGCCTATATATTTACTTCTGATATCCGCATTTCAAGAATTTGTGCTTTGAGGATTTCTCCAGTTGAGCTACAAAGTCTGCACTTAGTATATGAATTTTCTTTTTCTTTTTTTCATTATGAGTTGGCCGGGAGTAGAATCTGTAACGGCCAAAGCCCACCGCTAGCAAATACTGTTTGATTTTTCCTTTCGGGCTTTCCC GGTTGACGCACCGGAACGACCCCTTCTGCATTGGAAAATTTTTGCATTTAATAAAGCAAAGAGAAGCATAGTAGTTAGTTACATGGCAGAGTAAAGCGAAGGACAGTCACGTGCGGAGGATGGTCCTGATCCAGAGTCCACACAGTTGGCGAATACGCCAATTCCCCAAAAGCCAATAAACAAATCTCGAACACAAAGGGCGCCCAAATTCGCCATCGCAGCGACATGACAATCAGTGGCATCGTCGCCTTTAATATTGATATTCGGATCATATCACCCACTGGTCAAACGCAGACTCCATTTCTTTCAAAACCCGTCAAGTCTCTCCTCTTCCCCACCTCCATTTCGACCTCAATTCAGCCACCTCTTGCTGCTCGTTGCTCCTCCTCCTCCTCCGTCTCTCCTCTCGATATGGACAACGGTGCAGGTCTCAGTTTGTATCCACTACATCGATGCAAAACAATTCACCTGGTCAGGCATGCGCAAGGAATCCACAATGTTGATGGAGATAAGAGCTATAAAGCATATATGCGTCCTGAATTTTTTGATGCCCACATTACTCAGCTTGGATGGCAGCAGATTGATAATTTGCGTAAGCATGTTCATGCATCTGGTCTTTCCAGGAAGATTGAATTGGTAGTAACATCCCCTTTGCTCAGGACTCTACAAACCGCTGTTGGAGTATTTGGTGGTGAAGGCTATACAACTGGAATGGACGTGCTGCCACTAATGATTGCAAATGCAGGCAATAGTGCACGAGCTGCAATTTCAAGTCTAAACTGCCCACCTATTGCTGCTGTTGAGCTTTGTCGTGAACATTTGGGAGTTCATCCTTGTGACAAGAGGAGAAACATCAGCGACTATCAATTCCTCTTTCCTGCAGTCGATTTTTCACTGATAGAAAGTGACGAGGATGTATTGTGGAAGGCTGACATTAGAGAGACAAAAGAAGAGCTGGCAGCCAGAGGCTTGCAATTCCTGAATTGGTTGTGGACAAGGAAGGAGAAGGAGATAGCCGTTGTTACTCATAGTGGATTTTTGTTTCATACTCTAACTGCGTTTGGAAATGACTGTCACCCTTCGGTGAAAAAGGAAATATGCACACAATTTGCAAATTGCGAGCTTCGATCCATTGTCATAGTAGATAGAAGTATGGTCGGGTCGGATTCCTCGACAACTAATTATCCTGGAAAGATACCTCCGGGGCTGGATATCCCTAGTGATGCTGTGGATGACAAAAGCATGAAGGAAGAGAAACAACCAGTCGATTCTGAACCGAAGGAACATGAAAATATGTAAGTCTTATACGGCTATAGATAGAGAGATATTCAAATGTTGAGTGTCATTTATACAAACAAGTATTTTTGAAACTGCCTTATCTAGACACAGCACAACGCCTATATATTTACTTCTGATATCCGCATTTCAAGAATTTGTGCTTTGAGGATTTCTCCAGTTGAGCTACAAAGTCTGCACTTAGTATATGAATTTTCTTTTTCTTTTTTTCATTATGAGTTGGCCGGGAGTAGAATCTGTAACGGCCAAAGCCCACCGCTAGCAAATACTGTTTGATTTTTCCTTTCGGGCTTTCCC ATGACAATCAGTGGCATCGTCGCCTTTAATATTGATATTCGGATCATATCACCCACTGGTCAAACGCAGACTCCATTTCTTTCAAAACCCGTCAAGTCTCTCCTCTTCCCCACCTCCATTTCGACCTCAATTCAGCCACCTCTTGCTGCTCGTTGCTCCTCCTCCTCCTCCGTCTCTCCTCTCGATATGGACAACGGTGCAGGTCTCAGTTTGTATCCACTACATCGATGCAAAACAATTCACCTGGTCAGGCATGCGCAAGGAATCCACAATGTTGATGGAGATAAGAGCTATAAAGCATATATGCGTCCTGAATTTTTTGATGCCCACATTACTCAGCTTGGATGGCAGCAGATTGATAATTTGCGTAAGCATGTTCATGCATCTGGTCTTTCCAGGAAGATTGAATTGGTAGTAACATCCCCTTTGCTCAGGACTCTACAAACCGCTGTTGGAGTATTTGGTGGTGAAGGCTATACAACTGGAATGGACGTGCTGCCACTAATGATTGCAAATGCAGGCAATAGTGCACGAGCTGCAATTTCAAGTCTAAACTGCCCACCTATTGCTGCTGTTGAGCTTTGTCGTGAACATTTGGGAGTTCATCCTTGTGACAAGAGGAGAAACATCAGCGACTATCAATTCCTCTTTCCTGCAGTCGATTTTTCACTGATAGAAAGTGACGAGGATGTATTGTGGAAGGCTGACATTAGAGAGACAAAAGAAGAGCTGGCAGCCAGAGGCTTGCAATTCCTGAATTGGTTGTGGACAAGGAAGGAGAAGGAGATAGCCGTTGTTACTCATAGTGGATTTTTGTTTCATACTCTAACTGCGTTTGGAAATGACTGTCACCCTTCGGTGAAAAAGGAAATATGCACACAATTTGCAAATTGCGAGCTTCGATCCATTGTCATAGTAGATAGAAGTATGGTCGGGTCGGATTCCTCGACAACTAATTATCCTGGAAAGATACCTCCGGGGCTGGATATCCCTAGTGATGCTGTGGATGACAAAAGCATGAAGGAAGAGAAACAACCAGTCGATTCTGAACCGAAGGAACATGAAAATATGTAA
BLAST of CmoCh16G003080 vs. Swiss-Prot
Match: PGML1_ARATH (Phosphoglycerate mutase-like protein 1 OS=Arabidopsis thaliana GN=At5g64460 PE=2 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 5.8e-133 Identity = 222/282 (78.72%), Postives = 255/282 (90.43%), Query Frame = 1
BLAST of CmoCh16G003080 vs. Swiss-Prot
Match: PGML2_ARATH (Phosphoglycerate mutase-like protein 2 OS=Arabidopsis thaliana GN=At1g58280 PE=2 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 8.7e-105 Identity = 200/343 (58.31%), Postives = 235/343 (68.51%), Query Frame = 1
BLAST of CmoCh16G003080 vs. Swiss-Prot
Match: PGM_ARATH (Phosphoglycerate mutase-like protein OS=Arabidopsis thaliana GN=PGM PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 3.3e-104 Identity = 176/271 (64.94%), Postives = 218/271 (80.44%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TrEMBL
Match: A0A0A0KW79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179150 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 1.0e-184 Identity = 325/357 (91.04%), Postives = 335/357 (93.84%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TrEMBL
Match: A0A061E0N2_THECC (Phosphoglycerate mutase family protein isoform 1 OS=Theobroma cacao GN=TCM_007307 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 2.0e-140 Identity = 239/301 (79.40%), Postives = 267/301 (88.70%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TrEMBL
Match: A0A0D2V9M6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G053200 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 1.3e-139 Identity = 235/294 (79.93%), Postives = 262/294 (89.12%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TrEMBL
Match: A0A0D2VB20_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G053200 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 2.9e-139 Identity = 241/323 (74.61%), Postives = 270/323 (83.59%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TrEMBL
Match: A0A0D2S8Y7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G053200 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 9.3e-138 Identity = 230/277 (83.03%), Postives = 253/277 (91.34%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TAIR10
Match: AT5G64460.2 (AT5G64460.2 Phosphoglycerate mutase family protein) HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-134 Identity = 222/282 (78.72%), Postives = 255/282 (90.43%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TAIR10
Match: AT1G58280.2 (AT1G58280.2 Phosphoglycerate mutase family protein) HSP 1 Score: 381.7 bits (979), Expect = 4.9e-106 Identity = 200/343 (58.31%), Postives = 235/343 (68.51%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TAIR10
Match: AT2G17280.1 (AT2G17280.1 Phosphoglycerate mutase family protein) HSP 1 Score: 379.8 bits (974), Expect = 1.9e-105 Identity = 176/271 (64.94%), Postives = 218/271 (80.44%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TAIR10
Match: AT1G09935.1 (AT1G09935.1 Phosphoglycerate mutase family protein) HSP 1 Score: 262.3 bits (669), Expect = 4.3e-70 Identity = 124/243 (51.03%), Postives = 164/243 (67.49%), Query Frame = 1
BLAST of CmoCh16G003080 vs. TAIR10
Match: AT1G09932.1 (AT1G09932.1 Phosphoglycerate mutase family protein) HSP 1 Score: 212.2 bits (539), Expect = 5.1e-55 Identity = 105/249 (42.17%), Postives = 148/249 (59.44%), Query Frame = 1
BLAST of CmoCh16G003080 vs. NCBI nr
Match: gi|659108893|ref|XP_008454443.1| (PREDICTED: uncharacterized protein LOC103494848 isoform X1 [Cucumis melo]) HSP 1 Score: 655.6 bits (1690), Expect = 5.0e-185 Identity = 326/357 (91.32%), Postives = 335/357 (93.84%), Query Frame = 1
BLAST of CmoCh16G003080 vs. NCBI nr
Match: gi|449459558|ref|XP_004147513.1| (PREDICTED: phosphoglycerate mutase-like protein 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 654.1 bits (1686), Expect = 1.4e-184 Identity = 325/357 (91.04%), Postives = 335/357 (93.84%), Query Frame = 1
BLAST of CmoCh16G003080 vs. NCBI nr
Match: gi|590687787|ref|XP_007042763.1| (Phosphoglycerate mutase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 506.9 bits (1304), Expect = 2.9e-140 Identity = 239/301 (79.40%), Postives = 267/301 (88.70%), Query Frame = 1
BLAST of CmoCh16G003080 vs. NCBI nr
Match: gi|823260185|ref|XP_012462814.1| (PREDICTED: phosphoglycerate mutase-like protein 1 isoform X2 [Gossypium raimondii]) HSP 1 Score: 504.2 bits (1297), Expect = 1.9e-139 Identity = 235/294 (79.93%), Postives = 262/294 (89.12%), Query Frame = 1
BLAST of CmoCh16G003080 vs. NCBI nr
Match: gi|823260183|ref|XP_012462813.1| (PREDICTED: phosphoglycerate mutase-like protein 1 isoform X1 [Gossypium raimondii]) HSP 1 Score: 503.1 bits (1294), Expect = 4.1e-139 Identity = 241/323 (74.61%), Postives = 270/323 (83.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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