CmoCh16G002550 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G002550
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Pectin lyase-like superfamily protein) (Polygalacturonase-like protein)
LocationCmo_Chr16 : 1137304 .. 1140170 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTATTTTTCTGTCGGGTTTTATCTTTTTCACTGTTTCGTGGACTGTATTAGCTTCATCTTCTTTCAATGTTCTCGATTATGGAGCTGCTGGAAATGGCGAAACTGATGATACAGAAGTATGTAATTTAAACTCGATTTTTTATTTCCATGAAAAATTGATTGATTCGCACTCTAATTTTTCTCTTTGTTATAAGGCTTTTGTGAAAGCTTGGAAGGATGTCTGTGAAGCAACCGATGACATTCCAACATTGCAAGTACCTGCTGCAAAAATTTACCTTTTGAACCCTATCACATTTGAAGGTCCTTGCAAGTCTGAACAAGTCAATTTCGAGGTAATTTATCTTACTCATATATATATATATATCTATAAAAAAAATTTTGTCACATTTTCTTTTATCATATGATTTTTGAACGTATTGTGAATTTGCAGCTTAAAGGAACTCTAATGGCTCCGAGCAAAGATGCATGGCCAAATGATAACGATAAATGGATTCAATTTGTGGACATAGATGGACTTACTATCAATGGAGGAGGAAAAATAAACGGCCAAGGTTCTCTTTGGTGGGAAGGTTGTGAAGAACACTGCGATCACCCAACGGTAAAATTTAAAATTTCTTTACGTTTTAATTTACATTGAGTATATAACTAAAATTTGATATTTATAATATATGGTTTTTTAGGCATTATTTTTCCACAATTGCAACGGGCTTCATTTACAGAATACCGAACACATTGACAGTGCCAAGAATCACATCTCCATAAATTTTTGCAATGATGTCACTGTCTCAGATATTCACGTTAATGCTCCTGAAGACAGTCCTAATACAGATGGAATTGACATTTCTAGATCAACAAATGTTATTATTCAAAATTCTTTCATGTTAACGGGTAACAAATTAGTATTATTCTTCGGTACTATTACTTTTATATATATGAATTTAATGCATATTGTACAAAAATAATTATATTTATACATCTTTATCGAAGGGGATGACTGTATTGCCATTAACAATGGATCTTCATACATTACTATCAAGGGGGTTACTTGTGGCCCCGGCCATGGTATAAGGTAAAAATATCATTTTTTTTTAACAAAAACTACATAAAATCTAATCTTATGAACGGTTAATTAATTCCCTATTTAATTTTGTATGGTTTTATTTGAATGCAGCGTTGGGAGCTTGGGAGAAGATGGGCAATTCAACTCTGTCGAAAATATCTATGTGAGCGATAGCCTTTTGAAGGGAACTCAAAATGGAGTTAGAATCAAGACGTGGGAGGTGATAATTAGTTTTAATTAATTTTATGTATACTATAAAAAATTAATTATTTTTTTTTAACGTAATTACAGAGCGGATATGGATATGCAAGGAACATCACATTTGAACAAATAACATTCGAGGATGTAAAAAACCCGATCATTATTGATCAATATTACACATCTTTTGCATCTACAAGGGAAAATAAGGTACATTAAATTATATTTTTTAAATCTTTTTTTTCATCCTATTTTGACGTGAATATTTTTTTTTTAAAATTATGTTTACTTATTTATAGGAAATGGGCATAAAGGTGAGCGATGTGACTTATCGAGGAGTTAATGGAACATCAGCAGATGAAAACGTAATTACTTTCAAGTGTTCTCAAGCTAGTTGCACTGTGAATGTTTGCTTAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGGAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATAGTAATAAGGCAAATGTTAGATATTTGCCTTATAATAAAATATCAAATATAATATATATGATAAACTATAATTTATTACTAAATATCCTTAACACCCCACCGCAAGCTAAGCGTCGGATTTAAACGAACGTGAAGCTTGAATCTGAAAAATTTAAAGAGGTTGAAAAACACTTTTCGTGAAGATGTTAACAACCTGGTTTAGAGGAGGCGTAGAGAAACACTTTCTTGGCCATCGAAAACTGCAGAGAGATCGCCGCTCAGCGGCGATGCTGCCTTGGCTTCGGTGAGAATATGTCTAACCCATGAAGAGGGATTGTCACTTAGCGACGATGCTGACTTGGCTCTGGTGAGAATATGTCTAACCCCAAGAAGTAGAAGGGGAAACCTAGAGCAAGGGACAAAGACAATGTTGAAGCCGGAAGAGTCGCCACATTGGGCAAATGAGCCAATTTTGGCGAGAAGGGCGGCGGCAACTTGGTTGGCGAAGATGCCAGTGCGGCACCCGGATTCCAAAGGTAAATCTTTGGAGAAGGTCAATAGGTTTAGGTTAAGGTTTTTGTGAAGGATGAAGGGAAGATTGGAAAGAACATGAAAGAGACTATGTTGGTTGAGGGAAAATTGATTGTGTTGGAGGAGGTGAGGTTGTATGTACAGAGTATGGCGAAAGGTGATTTGGAGGTCAAAAGGGTGGAGCCAAAGAGTAATCAATCGACTCCGCTTGCGGCAGCCATGGCGACTGCACGTGCAGCGTCAAAGCCAGCAACGGTGGTGGAGAAAAACAGTGGAAGATTCAAAAGCCATTGAAAAGAAAGGATTGGGGTTGTTAAACCGCAAAGGCTCTGATACCATGAGAATATTAAATCTGATTCAACTTAACATGCACCAATATTATATTGGACCATGTGGACATACAAATGTCGGATCCCGATGACGAAGCTAAAGTGTTTTGTCAAAATGTTATTGGAAAAGCGAAATCTGTCGTTCCTATTGTTCCTTGCTTATCAGAATTTTAGTAAACTTCCGATAAGTATTTTTGATATTTTTATTAAGTTATCGTTGGAGAAAAGAATTAATTAA

mRNA sequence

ATGAAGCTTATTTTTCTGTCGGGTTTTATCTTTTTCACTGTTTCGTGGACTGTATTAGCTTCATCTTCTTTCAATGTTCTCGATTATGGAGCTGCTGGAAATGGCGAAACTGATGATACAGAAGCTTTTGTGAAAGCTTGGAAGGATGTCTGTGAAGCAACCGATGACATTCCAACATTGCAAGTACCTGCTGCAAAAATTTACCTTTTGAACCCTATCACATTTGAAGGTCCTTGCAAGTCTGAACAAGTCAATTTCGAGCTTAAAGGAACTCTAATGGCTCCGAGCAAAGATGCATGGCCAAATGATAACGATAAATGGATTCAATTTGTGGACATAGATGGACTTACTATCAATGGAGGAGGAAAAATAAACGGCCAAGGTTCTCTTTGGTGGGAAGGTTGTGAAGAACACTGCGATCACCCAACGGCATTATTTTTCCACAATTGCAACGGGCTTCATTTACAGAATACCGAACACATTGACAGTGCCAAGAATCACATCTCCATAAATTTTTGCAATGATGTCACTGTCTCAGATATTCACGTTAATGCTCCTGAAGACAGTCCTAATACAGATGGAATTGACATTTCTAGATCAACAAATGTTATTATTCAAAATTCTTTCATGTTAACGGGGGATGACTGTATTGCCATTAACAATGGATCTTCATACATTACTATCAAGGGGGTTACTTGTGGCCCCGGCCATGGTATAAGCGTTGGGAGCTTGGGAGAAGATGGGCAATTCAACTCTGTCGAAAATATCTATGTGAGCGATAGCCTTTTGAAGGGAACTCAAAATGGAGTTAGAATCAAGACGTGGGAGAGCGGATATGGATATGCAAGGAACATCACATTTGAACAAATAACATTCGAGGATGTAAAAAACCCGATCATTATTGATCAATATTACACATCTTTTGCATCTACAAGGGAAAATAAGGAAATGGGCATAAAGGTGAGCGATGTGACTTATCGAGGATTATCGTTGGAGAAAAGAATTAATTAA

Coding sequence (CDS)

ATGAAGCTTATTTTTCTGTCGGGTTTTATCTTTTTCACTGTTTCGTGGACTGTATTAGCTTCATCTTCTTTCAATGTTCTCGATTATGGAGCTGCTGGAAATGGCGAAACTGATGATACAGAAGCTTTTGTGAAAGCTTGGAAGGATGTCTGTGAAGCAACCGATGACATTCCAACATTGCAAGTACCTGCTGCAAAAATTTACCTTTTGAACCCTATCACATTTGAAGGTCCTTGCAAGTCTGAACAAGTCAATTTCGAGCTTAAAGGAACTCTAATGGCTCCGAGCAAAGATGCATGGCCAAATGATAACGATAAATGGATTCAATTTGTGGACATAGATGGACTTACTATCAATGGAGGAGGAAAAATAAACGGCCAAGGTTCTCTTTGGTGGGAAGGTTGTGAAGAACACTGCGATCACCCAACGGCATTATTTTTCCACAATTGCAACGGGCTTCATTTACAGAATACCGAACACATTGACAGTGCCAAGAATCACATCTCCATAAATTTTTGCAATGATGTCACTGTCTCAGATATTCACGTTAATGCTCCTGAAGACAGTCCTAATACAGATGGAATTGACATTTCTAGATCAACAAATGTTATTATTCAAAATTCTTTCATGTTAACGGGGGATGACTGTATTGCCATTAACAATGGATCTTCATACATTACTATCAAGGGGGTTACTTGTGGCCCCGGCCATGGTATAAGCGTTGGGAGCTTGGGAGAAGATGGGCAATTCAACTCTGTCGAAAATATCTATGTGAGCGATAGCCTTTTGAAGGGAACTCAAAATGGAGTTAGAATCAAGACGTGGGAGAGCGGATATGGATATGCAAGGAACATCACATTTGAACAAATAACATTCGAGGATGTAAAAAACCCGATCATTATTGATCAATATTACACATCTTTTGCATCTACAAGGGAAAATAAGGAAATGGGCATAAAGGTGAGCGATGTGACTTATCGAGGATTATCGTTGGAGAAAAGAATTAATTAA
Homology
[Close]
BLAST of CmoCh16G002550 vs. Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.8e-89
Identity = 165/327 (50.46%), Postives = 219/327 (66.97%), Query Frame = 1 

Query: 2   KLIFLSGFIFFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQ 61
           K  FL+  +FF   +T  +S++ +V  +GA G+G TDD++AF+KAW+ VC  T D     
Sbjct: 4   KTWFLNFSLFFLQIFT--SSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGD-GQFV 63

Query: 62  VPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSKDAWPNDNDKWIQFVDIDGLTINGG 121
           VPA   ++L P+ F+G CKS  V  ++ G L+APSK  W  D D+WI F DI+GL I G 
Sbjct: 64  VPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGD 123

Query: 122 GKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDI 181
           G+INGQGS WWE        PTAL F +CN L L    H+DS   HI I+ CN VT+S +
Sbjct: 124 GEINGQGSSWWE---HKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSL 183

Query: 182 HVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISV 241
            +NAPE SPNTDGID+  S+NV+IQ+  + TGDDCIAIN+G+S I I G+ CGPGHGIS+
Sbjct: 184 RINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISI 243

Query: 242 GSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIII 301
           GSLG+DG+  +VEN+ V +   +GT NG RIKTW+ G GYAR ITF  IT ++V+NPIII
Sbjct: 244 GSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIII 303

Query: 302 DQYYTSFAS--TRENKEMGIKVSDVTY 327
           DQ+Y    S   ++ K   ++VS V +
Sbjct: 304 DQFYNGGDSDNAKDRKSSAVEVSKVVF 324

[Close]
BLAST of CmoCh16G002550 vs. Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 7.2e-69
Identity = 143/316 (45.25%), Postives = 188/316 (59.49%), Query Frame = 1 

Query: 22  SSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITFEGPCKS 81
           +  +V D+GA G+G TDDT+AF KAWKD C +      L VP  K YLL  ITF GPCKS
Sbjct: 83  TDISVDDFGARGDG-TDDTKAFEKAWKDACSSGS---VLIVPENKNYLLKQITFSGPCKS 142

Query: 82  EQVNFELKGTLMAPSKDA-WPNDNDK-WIQFVDIDGLTINGGGKINGQGSLWWEG-CEEH 141
           + +  +++GT+ A S  + W   N K WI+F DI  LT+ GGG  NG G  WW+  C+  
Sbjct: 143 D-LRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLEGGGTSNGNGETWWDSSCKRK 202

Query: 142 ----CDH-PTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPNTD 201
               C   PTAL F +C  L + +    DS K H+S + C DV  S++ V APE SPNTD
Sbjct: 203 KSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTD 262

Query: 202 GIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFNSV 261
           GI I+ +  + + NS + TGDDCI+I +GS  +    +TCGPGHGIS+GSLG+      V
Sbjct: 263 GIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHGISIGSLGDRNSEAHV 322

Query: 262 ENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSFASTRE 321
             + V    L  T NG+RIKTW+ G G A+NI F+ I   +V NPIIIDQYY        
Sbjct: 323 SGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCP 382

Query: 322 NKEMGIKVSDVTYRGL 330
            +E  +KVS+V Y  +
Sbjct: 383 EQESAVKVSNVAYMNI 393

[Close]
BLAST of CmoCh16G002550 vs. Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.2e-68
Identity = 141/322 (43.79%), Postives = 201/322 (62.42%), Query Frame = 1 

Query: 17  TVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITFE 76
           T L +S+ +V ++GA G+G+TDDT+AF KAWK  C +T+ + T  VP  K YLL    F 
Sbjct: 61  TTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKAC-STNGVTTFLVPKGKTYLLKSTRFR 120

Query: 77  GPCKSEQVNFELKGTLMAPSKDAWPNDNDKWIQFVDIDGLTINGG--GKINGQGSLWWEG 136
           GPCKS + NF++ GTL A +K +   D + W+   D++ L+I+GG  G ING G  WW+ 
Sbjct: 121 GPCKSLR-NFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQN 180

Query: 137 C-----EEHCDH-PTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPED 196
                  + C   PTAL  +N   L+++N    ++ +  ISI  CN V VS++ + AP D
Sbjct: 181 SCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGD 240

Query: 197 SPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDG 256
           SPNTDGI I+ + N+ + NS + TGDDCI+I +G+  + I  +TCGPGHGIS+GSLG+D 
Sbjct: 241 SPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDN 300

Query: 257 QFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSF 316
               V  I V  +    + NGVRIKT++ G G A+NI F+ I  E+VKNPIIIDQ Y   
Sbjct: 301 SKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCD- 360

Query: 317 ASTRENKEMGIKVSDVTYRGLS 331
               E++E  ++V +V Y+ +S
Sbjct: 361 KDKCEDQESAVQVKNVVYKNIS 379

[Close]
BLAST of CmoCh16G002550 vs. Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 1.8e-67
Identity = 131/318 (41.19%), Postives = 196/318 (61.64%), Query Frame = 1 

Query: 23  SFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITFEGPCKSE 82
           SFNV  +GA  NG  DD++AF+KAW+  C +T  I  +  P  + Y+L  +TF GPCKS 
Sbjct: 70  SFNVNTFGAKANGN-DDSKAFMKAWEAACSSTG-IVYIVAPKNRDYMLKAVTFSGPCKSS 129

Query: 83  QVNFELKGTLMAPSKDAWPNDND-----KWIQFVDIDGLTINGGGKINGQGSLWW-EGCE 142
            + F++ G +     +AW N +D      WI F +++ L + GGG+I+G G +WW + C+
Sbjct: 130 LIIFKIYGRI-----EAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCK 189

Query: 143 EH-----CDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPN 202
            +        PTA+ F  CN L + N    ++ + H++   C +V   ++ V +P DSPN
Sbjct: 190 INPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPN 249

Query: 203 TDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFN 262
           TDGI +S + N++IQ+S + TGDDCI+I +GS  +   G+TCGPGHGIS+GSLGED    
Sbjct: 250 TDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEA 309

Query: 263 SVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSFAST 322
            V N+ V+ + L GT NGVRIKTW+ G+G A+NI F+ I  ++V NPIII+Q Y      
Sbjct: 310 YVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEA 369

Query: 323 RENKEMGIKVSDVTYRGL 330
              ++  ++VS+V Y+ +
Sbjct: 370 CPEQKSAVQVSNVLYKNI 380

[Close]
BLAST of CmoCh16G002550 vs. Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.0e-67
Identity = 137/321 (42.68%), Postives = 187/321 (58.26%), Query Frame = 1 

Query: 25  NVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITFEGPCKSEQV 84
           +V ++GA GNG TDDT+AF  AWK  C +      L VP     LL PI   GPCK+ ++
Sbjct: 54  HVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTRIL-VPENYTCLLRPIDLSGPCKA-RL 113

Query: 85  NFELKGTLMAPSK-DAWPNDND-KWIQFVDIDGLTINGGGKINGQGSLWWEGCEEHCDH- 144
             ++ GT++AP+  D W   N  KW+ F  +  LT+ GGG +NG G  WWE   +H +H 
Sbjct: 114 TLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKH-NHS 173

Query: 145 ------PTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPNTDGI 204
                 PTAL FH C  + ++N   IDS + HI++  C  VT+S + V AP  SPNTDGI
Sbjct: 174 NPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGI 233

Query: 205 DISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFNSVEN 264
            IS S  ++I N+ + TGDDCI+I   S+ I+I  + CGPGHGIS+GSLG+   +  V +
Sbjct: 234 HISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRD 293

Query: 265 IYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSFASTRENK 324
           I V  +++  T NGVRIKTW+ G G    I F  I   +V NPIIIDQYY        N+
Sbjct: 294 ITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQ 353

Query: 325 EMGIKVSDVTY---RGLSLEK 334
              I + ++++   RG S  K
Sbjct: 354 TSAISIENISFVHVRGTSASK 371

[Close]
BLAST of CmoCh16G002550 vs. TrEMBL
Match: A0A0A0KZ95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025750 PE=3 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 2.4e-127
Identity = 219/332 (65.96%), Postives = 271/332 (81.63%), Query Frame = 1 

Query: 1   MKLIFLSGFIFFTV---SWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDI 60
           MKL+  + F++      SWTVL SS FNVLDYGA GNG+TDD++AF+KAW DVC AT++ 
Sbjct: 1   MKLLSAAIFLYSIAILSSWTVLGSSDFNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEES 60

Query: 61  PTLQVPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSKDAWPNDND-KWIQFVDIDGL 120
           PTL VP  K YLLNP+ F+GPCKS+Q    L GTLMAP+KD W +D   +WIQF DI+GL
Sbjct: 61  PTLHVPDGKTYLLNPLKFQGPCKSKQ----LGGTLMAPTKDEWISDGKGQWIQFFDIEGL 120

Query: 121 TINGGGKINGQGSLWWEGCE-EHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCND 180
            + GGG+ +GQGSLWW+ C+ +HC  PTALFFHNCNGL ++  +HI+SAKNHISIN C+D
Sbjct: 121 NLQGGGRFDGQGSLWWKDCDHKHCKRPTALFFHNCNGLQMKGMKHINSAKNHISINMCHD 180

Query: 181 VTVSDIHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGP 240
           V  S +H++APEDSPNTDGIDIS STN+ I++SFM TGDDCIAINNGSS I I G+TCGP
Sbjct: 181 VIFSHLHISAPEDSPNTDGIDISESTNIFIEDSFMATGDDCIAINNGSSNININGITCGP 240

Query: 241 GHGISVGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDV 300
           GHGIS+GSLG+DG++N VEN++VS+ LL+ TQNG+RIKTWE GYGYA+NITFE+IT ++ 
Sbjct: 241 GHGISIGSLGKDGEYNVVENVHVSNCLLRSTQNGIRIKTWEGGYGYAKNITFEKITMKNA 300

Query: 301 KNPIIIDQYYTSFASTRENKEMGIKVSDVTYR 328
           KNPIIIDQYY+S+A +R+ K M IKVSDVTYR
Sbjct: 301 KNPIIIDQYYSSYAYSRKMKGMDIKVSDVTYR 328

[Close]
BLAST of CmoCh16G002550 vs. TrEMBL
Match: A0A067JZL5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19407 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 5.0e-101
Identity = 179/329 (54.41%), Postives = 244/329 (74.16%), Query Frame = 1 

Query: 16  WTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITF 75
           W V ASSSFNVLDYGA G+G+TD+++A ++AW+D+C AT   PTL VPA   +LL P+ F
Sbjct: 14  WIVTASSSFNVLDYGAIGDGKTDNSQAVLRAWEDLCGATRGTPTLIVPAGGTFLLKPVRF 73

Query: 76  EGPCKSEQVNFELKGTLMAPSK-DAWPNDNDKWIQFVDIDGLTINGGGKINGQGSLWWEG 135
           +GPCKS+ ++ +++GT++A +  +AW  D   W+QF D++GL I+GGG+I+GQG LWW+ 
Sbjct: 74  QGPCKSKNLHIQIQGTIVASNNINAWGKDKGSWLQFSDVNGLIIDGGGQIDGQGGLWWKF 133

Query: 136 CEEH--CDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPNT 195
           C+E   C  PTAL FHNCNGL L   +H++S +NHISIN C+DV +  +++ AP+DSPNT
Sbjct: 134 CKEDKGCSRPTALSFHNCNGLQLSGLKHLNSQRNHISINGCSDVNLFHLYITAPQDSPNT 193

Query: 196 DGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFNS 255
           DGIDIS ST++ I+NS + TGDDCIAIN  SSYI I G++CGPGHGISVGSLG++G + +
Sbjct: 194 DGIDISASTHINIRNSVIRTGDDCIAINGFSSYINISGISCGPGHGISVGSLGKNGAYET 253

Query: 256 VENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQ-YYTSFAST 315
           VE ++V +   KGTQNGVRIKTW+ G GYAR ITF+ I     +NPIIIDQ Y+  F  +
Sbjct: 254 VEEVHVQNCTFKGTQNGVRIKTWQGGAGYARKITFDNIILIASQNPIIIDQNYFCRFPYS 313

Query: 316 RENKEMGIKVSDVTYRGL----SLEKRIN 337
            E+    + +SDVTYR +    S+E+ I+
Sbjct: 314 AESS--NVYISDVTYRNIRGSSSVERAID 340

[Close]
BLAST of CmoCh16G002550 vs. TrEMBL
Match: M5VSG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023489mg PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.1e-95
Identity = 173/322 (53.73%), Postives = 231/322 (71.74%), Query Frame = 1 

Query: 12  FTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVC-EATDDIPTLQVPAAKIYLL 71
           F  +W    +++FNV+DYGA GNG  DDT+AF+KAW  +C  +T    TL VP  K +LL
Sbjct: 57  FLEAWEA-KTNTFNVVDYGAVGNGLVDDTKAFLKAWGAMCASSTQGTLTLVVPKGKRFLL 116

Query: 72  NPITFEGPCKSEQVNFELKGTLMAPSK-DAWPNDNDKWIQFVDIDGLTINGGGKINGQGS 131
           N + FEGPC++ +VNF+++G+++AP+   AW N  + WIQF  + GL++NGGG+I+G G+
Sbjct: 117 NAVAFEGPCRASKVNFQIQGSIVAPNNIGAWTN-KEMWIQFSKVQGLSVNGGGRIDGNGA 176

Query: 132 LWWEGCE-EHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPED 191
           +WW+ C  E C  PTAL F+ C+G  L      +S KNHISI  CN   V  + + AP+D
Sbjct: 177 VWWKACGGEGCQRPTALHFNKCHGFQLSRLAIFNSPKNHISICSCNGPRVFGLFIWAPKD 236

Query: 192 SPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDG 251
           SPNTDGIDIS+ST V IQ+S + TGDDCIAIN+GSSYI I+ + CGPGHGIS+GSLG+ G
Sbjct: 237 SPNTDGIDISQSTRVTIQSSHIATGDDCIAINSGSSYIKIRDIKCGPGHGISIGSLGQHG 296

Query: 252 QFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSF 311
           +++ VE + VS+   KGT NGVRIKTWE G GYAR ITFE ITFED KNPIIIDQ+Y + 
Sbjct: 297 EYSQVEEVQVSNCTFKGTTNGVRIKTWEGGSGYARKITFEGITFEDTKNPIIIDQHYFAK 356

Query: 312 ASTRENKEMGIKVSDVTYRGLS 331
            ++  +    ++VSDVTYR ++
Sbjct: 357 PTSAMDISKSVQVSDVTYRNIN 376

[Close]
BLAST of CmoCh16G002550 vs. TrEMBL
Match: M5WPS4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019727mg PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94
Identity = 176/322 (54.66%), Postives = 228/322 (70.81%), Query Frame = 1 

Query: 12  FTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVC-EATDDIPTLQVPAAKIYLL 71
           F  +W    +++FNV+DYGA GNG  DDT+AF+KAW  +C  +T    TL VP  K +LL
Sbjct: 2   FLEAWEA-KTNTFNVVDYGAVGNGLVDDTKAFLKAWGAMCASSTQGTLTLVVPKGKRFLL 61

Query: 72  NPITFEGPCKSEQVNFELKGTLMAPSK-DAWPNDNDKWIQFVDIDGLTINGGGKINGQGS 131
           N + FEGPC++ +VNF+++G+++AP+   AW N  + WI F D+ GLT+NGGG+I+G G+
Sbjct: 62  NAVAFEGPCRAGKVNFQIQGSIVAPNNIGAWTN-KEMWIHFSDVQGLTVNGGGRIDGNGA 121

Query: 132 LWWEGC-EEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPED 191
           +WW+ C  + C  PTAL F+ C+G  L      +S KNHISI  CN   V  + + AP+D
Sbjct: 122 VWWKACGSKGCQRPTALHFNKCHGFQLSRLAIFNSPKNHISICSCNGPRVYGLLIWAPKD 181

Query: 192 SPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDG 251
           SPNTDGIDISRST V IQ+S + TGDDCIAIN+GSSYI I+ + CGPGHGIS+GSLGE G
Sbjct: 182 SPNTDGIDISRSTRVTIQSSHIATGDDCIAINSGSSYIKIRDIRCGPGHGISIGSLGEHG 241

Query: 252 QFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSF 311
           +++ VE + VS+   KGT NGVRIKTWE G GYAR ITFE ITFED KNPIIIDQ+Y   
Sbjct: 242 EYSQVEEVQVSNCSFKGTTNGVRIKTWEGGSGYARKITFEGITFEDTKNPIIIDQHYFDK 301

Query: 312 ASTRE-NKEMGIKVSDVTYRGL 330
             T   +    ++VSDVTYR +
Sbjct: 302 RPTSAMDISKSVQVSDVTYRNI 321

[Close]
BLAST of CmoCh16G002550 vs. TrEMBL
Match: G7JAS3_MEDTR (Polygalacturonase/glycoside hydrolase family protein OS=Medicago truncatula GN=MTR_3g084360 PE=3 SV=2)

HSP 1 Score: 353.2 bits (905), Expect = 3.5e-94
Identity = 173/322 (53.73%), Postives = 224/322 (69.57%), Query Frame = 1 

Query: 11  FFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLL 70
           F  V+   LA  SFNV++YGA G+  TDD+ AF+KAW++VC +T   PTL +P  K ++L
Sbjct: 11  FRLVNRKPLAQKSFNVVNYGAKGDSNTDDSNAFLKAWQEVCGSTQGTPTLIIPGGKKFML 70

Query: 71  NPITFEGPCKSEQVNFELKGTLMAP-SKDAWP---NDNDKWIQFVDIDGLTINGGGKING 130
            P +F+GPCKS  V   + GT++AP S   W     D+D WI F  I GL I+G G  +G
Sbjct: 71  QPSSFQGPCKSSTVKVMMMGTIIAPQSSGKWKWDSRDDDAWISFSHIKGLIISGEGTFDG 130

Query: 131 QGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAP 190
           QG+ WW+   +H   PTAL F  C+ L L    HIDS KNHISI  CN   +S +H+ AP
Sbjct: 131 QGASWWKNYNDH-GRPTALQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAP 190

Query: 191 EDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGE 250
           E+SPNTDGIDISRSTN+II++S + TGDDCIAIN+GS +I I  + CGPGHGISVGSLG+
Sbjct: 191 ENSPNTDGIDISRSTNIIIEHSTISTGDDCIAINSGSKFINITAINCGPGHGISVGSLGK 250

Query: 251 DGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYT 310
           DG++ +VE ++VS S+  GT+NG RIKTW +G GYAR IT+E IT   V NPIIIDQ+Y 
Sbjct: 251 DGKYATVEEVHVSHSIFTGTENGARIKTWTAGTGYARKITYEDITLIKVNNPIIIDQHYD 310

Query: 311 SFASTRENKEMGIKVSDVTYRG 329
           +  S  ++   G+KVSDVT+RG
Sbjct: 311 ALESVSDSVRKGVKVSDVTFRG 331

[Close]
BLAST of CmoCh16G002550 vs. TAIR10
Match: AT3G15720.1 (AT3G15720.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 330.1 bits (845), Expect = 1.6e-90
Identity = 165/327 (50.46%), Postives = 219/327 (66.97%), Query Frame = 1 

Query: 2   KLIFLSGFIFFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQ 61
           K  FL+  +FF   +T  +S++ +V  +GA G+G TDD++AF+KAW+ VC  T D     
Sbjct: 4   KTWFLNFSLFFLQIFT--SSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTGD-GQFV 63

Query: 62  VPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSKDAWPNDNDKWIQFVDIDGLTINGG 121
           VPA   ++L P+ F+G CKS  V  ++ G L+APSK  W  D D+WI F DI+GL I G 
Sbjct: 64  VPAGMTFMLQPLKFQGSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGD 123

Query: 122 GKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDI 181
           G+INGQGS WWE        PTAL F +CN L L    H+DS   HI I+ CN VT+S +
Sbjct: 124 GEINGQGSSWWE---HKGSRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSL 183

Query: 182 HVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISV 241
            +NAPE SPNTDGID+  S+NV+IQ+  + TGDDCIAIN+G+S I I G+ CGPGHGIS+
Sbjct: 184 RINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISI 243

Query: 242 GSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIII 301
           GSLG+DG+  +VEN+ V +   +GT NG RIKTW+ G GYAR ITF  IT ++V+NPIII
Sbjct: 244 GSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIII 303

Query: 302 DQYYTSFAS--TRENKEMGIKVSDVTY 327
           DQ+Y    S   ++ K   ++VS V +
Sbjct: 304 DQFYNGGDSDNAKDRKSSAVEVSKVVF 324

[Close]
BLAST of CmoCh16G002550 vs. TAIR10
Match: AT5G27530.1 (AT5G27530.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 303.5 bits (776), Expect = 1.6e-82
Identity = 161/330 (48.79%), Postives = 209/330 (63.33%), Query Frame = 1 

Query: 1   MKLIFLSGFIFFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTL 60
           +++  L  FI F +    +    +NVL +GA G+G+TDD+ AF++AW   C   ++I TL
Sbjct: 34  LRISILINFICFGL----VNGQIYNVLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTL 93

Query: 61  QVPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSK-DAWPNDNDK-WIQFVDIDGLTI 120
            +P+ K YLL PI F+GPCKS  +  +L G ++APS   +W N   + WI F  + GL I
Sbjct: 94  FIPSGKTYLLQPIEFKGPCKSTSIKLQLDGIIVAPSNITSWSNPKSQTWISFSGVPGLMI 153

Query: 121 NGGGKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTV 180
           +G G ING+GS +WE          AL   NCN L +     IDS K+HISI  C+ V +
Sbjct: 154 DGSGTINGRGSSFWE----------ALHICNCNNLTINGITSIDSPKSHISIKNCHYVAI 213

Query: 181 SDIHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHG 240
           S I++ APE+SPNTDGIDIS STNV I +S + TGDDCIAIN GSS I I  V CGPGHG
Sbjct: 214 SKINILAPENSPNTDGIDISYSTNVNIFDSTIQTGDDCIAINTGSSSINITQVNCGPGHG 273

Query: 241 ISVGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNP 300
           ISVGSLG DG+  +V ++YV+      T NG RIKTW+ G GYARNI+FE IT  +V+NP
Sbjct: 274 ISVGSLGADGENAAVSDVYVTQCTFNKTTNGARIKTWQGGQGYARNISFENITLINVQNP 333

Query: 301 IIIDQYYTSFASTRENKEMGIKVSDVTYRG 329
           IIIDQ YT        K+  + +S V Y G
Sbjct: 334 IIIDQQYTDKVLLDATKDSAVAISSVKYVG 349

[Close]
BLAST of CmoCh16G002550 vs. TAIR10
Match: AT4G35670.1 (AT4G35670.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 298.9 bits (764), Expect = 3.9e-81
Identity = 159/336 (47.32%), Postives = 208/336 (61.90%), Query Frame = 1 

Query: 1   MKLIFLSGFIFFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTL 60
           MK I     +   + + ++   ++NVL++ A G+G+TDD+EAF++AW   C    DI TL
Sbjct: 1   MKTILDISILINFLCFGIVYGKNYNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTL 60

Query: 61  QVPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPS-KDAWPNDNDK-WIQFVDIDGLTI 120
            +P+ K +LL P  F+GPCKS  +  +L GT++APS K AW +   + WI+F  + GL I
Sbjct: 61  LIPSGKTFLLQPTVFQGPCKSSSIKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLII 120

Query: 121 NGGGKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTV 180
            G G I+ +GS +WE   +    PTAL    C+ L +     IDS KNHISI  CN V +
Sbjct: 121 VGSGTIDSRGSSFWELNLKASQRPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAI 180

Query: 181 SDIHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHG 240
           S+I++ APE SPNTDGIDIS STN+ I +S + TGDDCIAIN+GSS I I G+ CGPGHG
Sbjct: 181 SNINLFAPETSPNTDGIDISDSTNINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHG 240

Query: 241 ISVGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNP 300
           ISVGSLG  G    V ++ V+      T NG RIKTW  G GYARNI+F  IT  + KNP
Sbjct: 241 ISVGSLGAGGAEAKVSDVQVTHCTFNQTTNGARIKTWLGGQGYARNISFTDITLVNTKNP 300

Query: 301 IIIDQYYTSFASTRENKEMGI-KVSDVTYRGLSLEK 334
           IIIDQ+Y       E   + I  V  V +RG S  K
Sbjct: 301 IIIDQHYIDKGRLTEESAVAISNVKFVDFRGTSSNK 336

[Close]
BLAST of CmoCh16G002550 vs. TAIR10
Match: AT5G17200.1 (AT5G17200.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-78
Identity = 146/323 (45.20%), Postives = 198/323 (61.30%), Query Frame = 1 

Query: 25  NVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITFEGPCKSEQV 84
           +V  +GA G+G+TDDT+AF+KAW+ VC+   +   L VP  K ++L P+TF GPCKS  +
Sbjct: 40  SVTSFGAIGDGKTDDTKAFLKAWEAVCKGGHNRKIL-VPQGKTFMLKPLTFIGPCKSSTI 99

Query: 85  NFELKGTLMAPSKDAWPNDNDKWIQFVDIDGLTINGGGKINGQGSLWWEGCEEHCDHPTA 144
           +  ++G L+AP    +      WI F  I+GL + GGG I+G+GSLWW       + P A
Sbjct: 100 SLSIRGNLVAPGYTWYAGRYTTWISFDSINGLVVTGGGTIDGRGSLWWGNVN---NRPCA 159

Query: 145 LFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPNTDGIDISRSTNVI 204
           + F+NCNGL + N  H++S +NH+ ++   ++ V  + + AP DSPNTDGIDIS    V 
Sbjct: 160 MHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPGDSPNTDGIDISNCIGVH 219

Query: 205 IQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFNSVENIYVSDSLLK 264
           I +S + TGDDCIAIN+GSS+I I G+ CGPGHGISVGSLG  G F +VE + V +    
Sbjct: 220 IHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFETVEEVRVKNCTFT 279

Query: 265 GTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYY------------------- 324
            TQNGVRIKT+++G GYAR I+FE I     +NPIIIDQ Y                   
Sbjct: 280 KTQNGVRIKTYQNGSGYARKISFEDINMVASENPIIIDQTYHNGGTNGGISKSSSSYQNC 339

Query: 325 --TSFASTRENKEMGIKVSDVTY 327
             T+   T      G+KV+DV Y
Sbjct: 340 HLTAKQRTPSGNGKGVKVTDVRY 358

[Close]
BLAST of CmoCh16G002550 vs. TAIR10
Match: AT5G44840.1 (AT5G44840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-75
Identity = 147/329 (44.68%), Postives = 210/329 (63.83%), Query Frame = 1 

Query: 4   IFLSGFIFFTVSWTVLASSS-FNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQV 63
           I L G    T+  ++L +   ++VL++GA GNG TDD++AFVKAW  +C +  +  T  +
Sbjct: 3   IILRGVFLLTLLHSILVNGQIYDVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFII 62

Query: 64  PAAKIYLLNPITFEGPCKSEQVNFELKGTLMAP-SKDAWPNDN-DKWIQFVDIDGLTING 123
           P+ K +LL P+TF+GPCKS  V  +  G ++AP +K AW +    +W+ F +I GLT+NG
Sbjct: 63  PSNKTFLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSDYKLFRWVSFKEIIGLTVNG 122

Query: 124 GGKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSD 183
            G I+G+GS +W+           L F  CN L +      +S KNHISI+ C  V ++ 
Sbjct: 123 SGTIHGRGSSFWK----------QLHFQRCNDLMITGITSFNSPKNHISISECKRVKITK 182

Query: 184 IHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGIS 243
           I + AP DSPNTDGI+IS S++V I ++ + TGDDC+AIN+GS  I I  + CGPGHGIS
Sbjct: 183 IKLVAPHDSPNTDGINISESSDVDIYDTVIGTGDDCVAINSGSMNINIARMNCGPGHGIS 242

Query: 244 VGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPII 303
           VGS+G DG+ + VEN+ V++     T NG RIKTW +G GYA+NI F+ +TF + KNPII
Sbjct: 243 VGSVGRDGEESIVENVQVTNCTFIRTDNGARIKTWPNGKGYAKNILFKSLTFRETKNPII 302

Query: 304 IDQYYTSFASTRENKEMGIKVSDVTYRGL 330
           IDQ Y       + +E  + +S+VT+  L
Sbjct: 303 IDQNYVD-KGRLDVEESAVAISNVTFTDL 320

[Close]
BLAST of CmoCh16G002550 vs. NCBI nr
Match: gi|778697492|ref|XP_011654334.1| (PREDICTED: probable polygalacturonase At3g15720 [Cucumis sativus])

HSP 1 Score: 463.4 bits (1191), Expect = 3.4e-127
Identity = 219/332 (65.96%), Postives = 271/332 (81.63%), Query Frame = 1 

Query: 1   MKLIFLSGFIFFTV---SWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDI 60
           MKL+  + F++      SWTVL SS FNVLDYGA GNG+TDD++AF+KAW DVC AT++ 
Sbjct: 1   MKLLSAAIFLYSIAILSSWTVLGSSDFNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEES 60

Query: 61  PTLQVPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSKDAWPNDND-KWIQFVDIDGL 120
           PTL VP  K YLLNP+ F+GPCKS+Q    L GTLMAP+KD W +D   +WIQF DI+GL
Sbjct: 61  PTLHVPDGKTYLLNPLKFQGPCKSKQ----LGGTLMAPTKDEWISDGKGQWIQFFDIEGL 120

Query: 121 TINGGGKINGQGSLWWEGCE-EHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCND 180
            + GGG+ +GQGSLWW+ C+ +HC  PTALFFHNCNGL ++  +HI+SAKNHISIN C+D
Sbjct: 121 NLQGGGRFDGQGSLWWKDCDHKHCKRPTALFFHNCNGLQMKGMKHINSAKNHISINMCHD 180

Query: 181 VTVSDIHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGP 240
           V  S +H++APEDSPNTDGIDIS STN+ I++SFM TGDDCIAINNGSS I I G+TCGP
Sbjct: 181 VIFSHLHISAPEDSPNTDGIDISESTNIFIEDSFMATGDDCIAINNGSSNININGITCGP 240

Query: 241 GHGISVGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDV 300
           GHGIS+GSLG+DG++N VEN++VS+ LL+ TQNG+RIKTWE GYGYA+NITFE+IT ++ 
Sbjct: 241 GHGISIGSLGKDGEYNVVENVHVSNCLLRSTQNGIRIKTWEGGYGYAKNITFEKITMKNA 300

Query: 301 KNPIIIDQYYTSFASTRENKEMGIKVSDVTYR 328
           KNPIIIDQYY+S+A +R+ K M IKVSDVTYR
Sbjct: 301 KNPIIIDQYYSSYAYSRKMKGMDIKVSDVTYR 328

[Close]
BLAST of CmoCh16G002550 vs. NCBI nr
Match: gi|659108957|ref|XP_008454473.1| (PREDICTED: probable polygalacturonase At3g15720 [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 2.3e-123
Identity = 216/331 (65.26%), Postives = 264/331 (79.76%), Query Frame = 1 

Query: 1   MKLIF---LSGFIFFTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDI 60
           MKL+    L+  I    S TVL+SS FNVLDYGA GNG+TDD++AF+KAW DVC AT D 
Sbjct: 1   MKLLLAAILTYSIAILSSRTVLSSSDFNVLDYGAIGNGKTDDSKAFLKAWNDVCGATQDS 60

Query: 61  PTLQVPAAKIYLLNPITFEGPCKSEQVNFELKGTLMAPSKDAWPNDN-DKWIQFVDIDGL 120
           PTL VP  K YLL+P+ F+GPCKS QV F+L GTLMAP+KD WPND   KW+QFVD++GL
Sbjct: 61  PTLHVPDGKTYLLSPLKFQGPCKSNQVIFDLGGTLMAPTKDEWPNDGKSKWVQFVDVEGL 120

Query: 121 TINGGGKINGQGSLWWEGCEEHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDV 180
            + GGG+ +GQGS WW+          ALFFHNCNGL +   +H++SAKNHISIN CNDV
Sbjct: 121 NVQGGGRFDGQGSCWWK----------ALFFHNCNGLQMNGMKHVNSAKNHISINLCNDV 180

Query: 181 TVSDIHVNAPEDSPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPG 240
             S +H++APEDSPNTDGIDIS+STN+ IQ+SF+ TGDDC+AINNGSS I I  +TCGPG
Sbjct: 181 IFSHLHISAPEDSPNTDGIDISQSTNIFIQDSFIGTGDDCVAINNGSSNININTITCGPG 240

Query: 241 HGISVGSLGEDGQFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVK 300
           HGIS+GSLG+DG++N VEN++VS+ LL+ TQNG+RIKTWE GYGYA+NITFE+IT ++ K
Sbjct: 241 HGISIGSLGKDGEYNVVENVHVSNCLLRNTQNGIRIKTWEGGYGYAKNITFEKITLKNSK 300

Query: 301 NPIIIDQYYTSFASTRENKEMGIKVSDVTYR 328
           NPIIIDQYYTS+A +R+ K M IKVSDVTYR
Sbjct: 301 NPIIIDQYYTSYAYSRKIKGMDIKVSDVTYR 321

[Close]
BLAST of CmoCh16G002550 vs. NCBI nr
Match: gi|802681849|ref|XP_012082168.1| (PREDICTED: probable polygalacturonase At3g15720 [Jatropha curcas])

HSP 1 Score: 375.9 bits (964), Expect = 7.2e-101
Identity = 179/329 (54.41%), Postives = 244/329 (74.16%), Query Frame = 1 

Query: 16  WTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITF 75
           W V ASSSFNVLDYGA G+G+TD+++A ++AW+D+C AT   PTL VPA   +LL P+ F
Sbjct: 14  WIVTASSSFNVLDYGAIGDGKTDNSQAVLRAWEDLCGATRGTPTLIVPAGGTFLLKPVRF 73

Query: 76  EGPCKSEQVNFELKGTLMAPSK-DAWPNDNDKWIQFVDIDGLTINGGGKINGQGSLWWEG 135
           +GPCKS+ ++ +++GT++A +  +AW  D   W+QF D++GL I+GGG+I+GQG LWW+ 
Sbjct: 74  QGPCKSKNLHIQIQGTIVASNNINAWGKDKGSWLQFSDVNGLIIDGGGQIDGQGGLWWKF 133

Query: 136 CEEH--CDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPNT 195
           C+E   C  PTAL FHNCNGL L   +H++S +NHISIN C+DV +  +++ AP+DSPNT
Sbjct: 134 CKEDKGCSRPTALSFHNCNGLQLSGLKHLNSQRNHISINGCSDVNLFHLYITAPQDSPNT 193

Query: 196 DGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFNS 255
           DGIDIS ST++ I+NS + TGDDCIAIN  SSYI I G++CGPGHGISVGSLG++G + +
Sbjct: 194 DGIDISASTHINIRNSVIRTGDDCIAINGFSSYINISGISCGPGHGISVGSLGKNGAYET 253

Query: 256 VENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQ-YYTSFAST 315
           VE ++V +   KGTQNGVRIKTW+ G GYAR ITF+ I     +NPIIIDQ Y+  F  +
Sbjct: 254 VEEVHVQNCTFKGTQNGVRIKTWQGGAGYARKITFDNIILIASQNPIIIDQNYFCRFPYS 313

Query: 316 RENKEMGIKVSDVTYRGL----SLEKRIN 337
            E+    + +SDVTYR +    S+E+ I+
Sbjct: 314 AESS--NVYISDVTYRNIRGSSSVERAID 340

[Close]
BLAST of CmoCh16G002550 vs. NCBI nr
Match: gi|1009123377|ref|XP_015878509.1| (PREDICTED: probable polygalacturonase At3g15720 [Ziziphus jujuba])

HSP 1 Score: 372.9 bits (956), Expect = 6.1e-100
Identity = 170/301 (56.48%), Postives = 220/301 (73.09%), Query Frame = 1 

Query: 27  LDYGAAGNGETDDTEAFVKAWKDVCEATDDIPTLQVPAAKIYLLNPITFEGPCKSEQVNF 86
           +DYGA G+G+TDD+ AF+KAW D+C A++   TL +P  K +LL P+TF GPC S  +NF
Sbjct: 1   MDYGAVGDGQTDDSPAFLKAWGDLCGASEGTATLNIPKEKTFLLKPLTFSGPCNSSNINF 60

Query: 87  ELKGTLMAPSKDAWPNDNDKWIQFVDIDGLTINGGGKINGQGSLWWEGCEEHCDHPTALF 146
           +++G L+AP+  +W  D   WI F  ++GL +NGGG I+GQGS WW  C        AL 
Sbjct: 61  QIEGKLVAPNMGSWSGDKSMWISFDHVEGLVVNGGGSIDGQGSAWWNACGNE-----ALH 120

Query: 147 FHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPEDSPNTDGIDISRSTNVIIQ 206
           F+ C+GLHL +  H+DS KNHIS+  CN+V + ++HV AP++SPNTDGIDIS S ++ I 
Sbjct: 121 FNQCHGLHLSDLSHLDSPKNHISLKSCNNVHIVNLHVTAPKESPNTDGIDISESADIHID 180

Query: 207 NSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDGQFNSVENIYVSDSLLKGT 266
           +S M TGDDCI INNGSSYI IKG+TCGPGHGISVGSLG +G +N+VEN+YV +   KGT
Sbjct: 181 DSVMATGDDCIGINNGSSYINIKGITCGPGHGISVGSLGGNGAYNTVENVYVFNCTFKGT 240

Query: 267 QNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSFASTRENKEMGIKVSDVTY 326
           QNG RIKT + G GYARNITFE+I  ED +NPIIIDQ Y   AS   NKE  +++S+VTY
Sbjct: 241 QNGARIKTSQGGSGYARNITFEKIIVEDCENPIIIDQQYD--ASVESNKESAVEISEVTY 294

Query: 327 R 328
           +
Sbjct: 301 K 294

[Close]
BLAST of CmoCh16G002550 vs. NCBI nr
Match: gi|595810412|ref|XP_007203070.1| (hypothetical protein PRUPE_ppa023489mg [Prunus persica])

HSP 1 Score: 356.7 bits (914), Expect = 4.5e-95
Identity = 173/322 (53.73%), Postives = 231/322 (71.74%), Query Frame = 1 

Query: 12  FTVSWTVLASSSFNVLDYGAAGNGETDDTEAFVKAWKDVC-EATDDIPTLQVPAAKIYLL 71
           F  +W    +++FNV+DYGA GNG  DDT+AF+KAW  +C  +T    TL VP  K +LL
Sbjct: 57  FLEAWEA-KTNTFNVVDYGAVGNGLVDDTKAFLKAWGAMCASSTQGTLTLVVPKGKRFLL 116

Query: 72  NPITFEGPCKSEQVNFELKGTLMAPSK-DAWPNDNDKWIQFVDIDGLTINGGGKINGQGS 131
           N + FEGPC++ +VNF+++G+++AP+   AW N  + WIQF  + GL++NGGG+I+G G+
Sbjct: 117 NAVAFEGPCRASKVNFQIQGSIVAPNNIGAWTN-KEMWIQFSKVQGLSVNGGGRIDGNGA 176

Query: 132 LWWEGCE-EHCDHPTALFFHNCNGLHLQNTEHIDSAKNHISINFCNDVTVSDIHVNAPED 191
           +WW+ C  E C  PTAL F+ C+G  L      +S KNHISI  CN   V  + + AP+D
Sbjct: 177 VWWKACGGEGCQRPTALHFNKCHGFQLSRLAIFNSPKNHISICSCNGPRVFGLFIWAPKD 236

Query: 192 SPNTDGIDISRSTNVIIQNSFMLTGDDCIAINNGSSYITIKGVTCGPGHGISVGSLGEDG 251
           SPNTDGIDIS+ST V IQ+S + TGDDCIAIN+GSSYI I+ + CGPGHGIS+GSLG+ G
Sbjct: 237 SPNTDGIDISQSTRVTIQSSHIATGDDCIAINSGSSYIKIRDIKCGPGHGISIGSLGQHG 296

Query: 252 QFNSVENIYVSDSLLKGTQNGVRIKTWESGYGYARNITFEQITFEDVKNPIIIDQYYTSF 311
           +++ VE + VS+   KGT NGVRIKTWE G GYAR ITFE ITFED KNPIIIDQ+Y + 
Sbjct: 297 EYSQVEEVQVSNCTFKGTTNGVRIKTWEGGSGYARKITFEGITFEDTKNPIIIDQHYFAK 356

Query: 312 ASTRENKEMGIKVSDVTYRGLS 331
            ++  +    ++VSDVTYR ++
Sbjct: 357 PTSAMDISKSVQVSDVTYRNIN 376

The following BLAST results are available for this feature:
BLAST of CmoCh16G002550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR3_ARATH2.8e-8950.46Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 S... [more]
PGLR_PERAE7.2e-6945.25Polygalacturonase OS=Persea americana PE=2 SV=1[more]
ADPG1_ARATH1.2e-6843.79Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1[more]
QRT2_ARATH1.8e-6741.19Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2[more]
PGLR5_ARATH4.0e-6742.68Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 S... [more]
BLAST of CmoCh16G002550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ95_CUCSA2.4e-12765.96Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025750 PE=3 SV=1[more]
A0A067JZL5_JATCU5.0e-10154.41Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19407 PE=3 SV=1[more]
M5VSG3_PRUPE3.1e-9553.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023489mg PE=3 SV=1[more]
M5WPS4_PRUPE1.2e-9454.66Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019727mg PE=3 S... [more]
G7JAS3_MEDTR3.5e-9453.73Polygalacturonase/glycoside hydrolase family protein OS=Medicago truncatula GN=M... [more]
BLAST of CmoCh16G002550 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15720.11.6e-9050.46 Pectin lyase-like superfamily protein[more]
AT5G27530.11.6e-8248.79 Pectin lyase-like superfamily protein[more]
AT4G35670.13.9e-8147.32 Pectin lyase-like superfamily protein[more]
AT5G17200.15.3e-7845.20 Pectin lyase-like superfamily protein[more]
AT5G44840.11.4e-7544.68 Pectin lyase-like superfamily protein[more]
BLAST of CmoCh16G002550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697492|ref|XP_011654334.1|3.4e-12765.96PREDICTED: probable polygalacturonase At3g15720 [Cucumis sativus][more]
gi|659108957|ref|XP_008454473.1|2.3e-12365.26PREDICTED: probable polygalacturonase At3g15720 [Cucumis melo][more]
gi|802681849|ref|XP_012082168.1|7.2e-10154.41PREDICTED: probable polygalacturonase At3g15720 [Jatropha curcas][more]
gi|1009123377|ref|XP_015878509.1|6.1e-10056.48PREDICTED: probable polygalacturonase At3g15720 [Ziziphus jujuba][more]
gi|595810412|ref|XP_007203070.1|4.5e-9553.73hypothetical protein PRUPE_ppa023489mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR006626PbH1
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G002550.1CmoCh16G002550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 58..328
score: 2.7
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 230..243
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 173..199
score: 74.0coord: 223..243
score: 2500.0coord: 253..274
score: 97.0coord: 200..221
score: 1200.0coord: 282..303
score: 17
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 11..329
score: 6.58E
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 20..330
score: 5.5E
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 1..328
score: 3.7E
NoneNo IPR availablePANTHERPTHR31375:SF42SUBFAMILY NOT NAMEDcoord: 1..328
score: 3.7E