CmoCh16G001170 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G001170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF-box
LocationCmo_Chr16 : 532736 .. 534212 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGTGGTGGGCGCTTCTGAAAAGGGTCTTGCCTATAACGTCACCTTCTCTCTGCCCATAAATTTTTGGAATCAAACGAACCAGTTCAAAGATTGAAGGTAAAATTATTCCAAGCTCTCTCAGAATCTTGCCCTTTTCTTTCAGTTGCAATTGATTTTTATGGATCTTGAGAAAAATAGCTTGATTAGAATCTTCATTTGAGTTTTTTGTTCGTATTGCTTCTGATCCAACATTTCGAATTCCCAGGTGAAATCTGCAGATTTTGCTTCGTTTCTTGGATTTTGCTCTTGCGTCTCCAGCTGTTGCGGTAATCTTTTCTACTTCATTCTCGTCGTTTACATTTCCTGCCCTAACGATGCGAGTAGCACAAGACGACCACAAGGTGTTTGTAAATTGTCCCACTGAAATTTTGATTGAGATTCTTTCATATTTACCTGTGAAATCGCTTCTGCGATTCAGATCTGTATGCAAAGAATGGAACAAATTAGTTCAGAAACCATTGTTTGTTAATGCTCATTTGAAAAACAGAATCTCAAATTCTCTGCTCATAATCAATTGCTCCAACACAGACCAGAAATCATGTTTCTCACTTGTCAATGCTGAAACATTCAATGAAACGCTTCGATCCGAGCTTCCCATGAAGGCCAATACAGGCTATAAACTCTCTGTTATTGGATCACATAACGGGTTAGTCTGTATTTCATCTGCAAGTCTGTTGGATGTAGATCCAATTCATATATGGAACCCATCTGTTAGAAAATCTAGGTTGCTTCCCCGTGGCTTGATTCCCAAACGGGACCATTGTTGGCCTCTAAATTACCTTGCATTTGGCTTCAATCAAGCAGCGAATGATCACATAGTGTTGAGAATTGTGAGGATTGAGCAATGGAGATGCTGTTATCAAGTGGAAATTTACAGTCTCAAATCCGACTGTTGGAGGAGAGTTCCTTCCGTTCCTCCTATTCCCACTGCACTTGACTGCAGATTGTTGCCCAAATCCATCTGCTTCAGTGGACATGTCTATTGGCTTGTGAAGCACAAAAATGGTGGAATTCCCAATTCTGTTCTGTGTTTTGACATGGCCACTGAGGAGTTTCATAGACTAATGTTGCCAGACTGTTTCGTTTACACAGATACTCCATCACCATTATTATGCTTGGGAGTGATCAAGGAATCTCTATCTGTTTTTCATTGCAGGCCTGATGGTGGGAAGCAACTATGCGACATATGGGCTATGAAAATGGGCTCTTGGGTGAGATCAAACACTGTTTTTCTGCCACTACATGGGCAAATAACAAGATCATTGAGCCTCTTTGATCATAAATTTCTCCTTGTAAGGCAGATTGAAGGGCTGGAAAACTATAGTCTGGCATTGTTTGATCCTGAACAGGATCGCATTGAGGATATTGGAATTGAATTGGGTTCTCATTGGGTTTATGCAGATTCTTATACGGAGAGTCTTCTTCTACTCTGA

mRNA sequence

ATGAGCGTGGTGGGCGCTTCTGAAAAGGGTCTTGCCTATAACATTTTGCTTCGTTTCTTGGATTTTGCTCTTGCGTCTCCAGCTGTTGCGGTAATCTTTTCTACTTCATTCTCGTCGTTTACATTTCCTGCCCTAACGATGCGAGTAGCACAAGACGACCACAAGGTGTTTGTAAATTGTCCCACTGAAATTTTGATTGAGATTCTTTCATATTTACCTGTGAAATCGCTTCTGCGATTCAGATCTGTATGCAAAGAATGGAACAAATTAGTTCAGAAACCATTGTTTGTTAATGCTCATTTGAAAAACAGAATCTCAAATTCTCTGCTCATAATCAATTGCTCCAACACAGACCAGAAATCATGTTTCTCACTTGTCAATGCTGAAACATTCAATGAAACGCTTCGATCCGAGCTTCCCATGAAGGCCAATACAGGCTATAAACTCTCTGTTATTGGATCACATAACGGGTTAGTCTGTATTTCATCTGCAAGTCTGTTGGATGTAGATCCAATTCATATATGGAACCCATCTGTTAGAAAATCTAGGTTGCTTCCCCGTGGCTTGATTCCCAAACGGGACCATTGTTGGCCTCTAAATTACCTTGCATTTGGCTTCAATCAAGCAGCGAATGATCACATAGTGTTGAGAATTGTGAGGATTGAGCAATGGAGATGCTGTTATCAAGTGGAAATTTACAGTCTCAAATCCGACTGTTGGAGGAGAGTTCCTTCCGTTCCTCCTATTCCCACTGCACTTGACTGCAGATTGTTGCCCAAATCCATCTGCTTCAGTGGACATGTCTATTGGCTTGTGAAGCACAAAAATGGTGGAATTCCCAATTCTGTTCTGTGTTTTGACATGGCCACTGAGGAGTTTCATAGACTAATGTTGCCAGACTGTTTCGTTTACACAGATACTCCATCACCATTATTATGCTTGGGAGTGATCAAGGAATCTCTATCTGTTTTTCATTGCAGGCCTGATGGTGGGAAGCAACTATGCGACATATGGGCTATGAAAATGGGCTCTTGGGTGAGATCAAACACTGTTTTTCTGCCACTACATGGGCAAATAACAAGATCATTGAGCCTCTTTGATCATAAATTTCTCCTTGTAAGGCAGATTGAAGGGCTGGAAAACTATAGTCTGGCATTGTTTGATCCTGAACAGGATCGCATTGAGGATATTGGAATTGAATTGGGTTCTCATTGGGTTTATGCAGATTCTTATACGGAGAGTCTTCTTCTACTCTGA

Coding sequence (CDS)

ATGAGCGTGGTGGGCGCTTCTGAAAAGGGTCTTGCCTATAACATTTTGCTTCGTTTCTTGGATTTTGCTCTTGCGTCTCCAGCTGTTGCGGTAATCTTTTCTACTTCATTCTCGTCGTTTACATTTCCTGCCCTAACGATGCGAGTAGCACAAGACGACCACAAGGTGTTTGTAAATTGTCCCACTGAAATTTTGATTGAGATTCTTTCATATTTACCTGTGAAATCGCTTCTGCGATTCAGATCTGTATGCAAAGAATGGAACAAATTAGTTCAGAAACCATTGTTTGTTAATGCTCATTTGAAAAACAGAATCTCAAATTCTCTGCTCATAATCAATTGCTCCAACACAGACCAGAAATCATGTTTCTCACTTGTCAATGCTGAAACATTCAATGAAACGCTTCGATCCGAGCTTCCCATGAAGGCCAATACAGGCTATAAACTCTCTGTTATTGGATCACATAACGGGTTAGTCTGTATTTCATCTGCAAGTCTGTTGGATGTAGATCCAATTCATATATGGAACCCATCTGTTAGAAAATCTAGGTTGCTTCCCCGTGGCTTGATTCCCAAACGGGACCATTGTTGGCCTCTAAATTACCTTGCATTTGGCTTCAATCAAGCAGCGAATGATCACATAGTGTTGAGAATTGTGAGGATTGAGCAATGGAGATGCTGTTATCAAGTGGAAATTTACAGTCTCAAATCCGACTGTTGGAGGAGAGTTCCTTCCGTTCCTCCTATTCCCACTGCACTTGACTGCAGATTGTTGCCCAAATCCATCTGCTTCAGTGGACATGTCTATTGGCTTGTGAAGCACAAAAATGGTGGAATTCCCAATTCTGTTCTGTGTTTTGACATGGCCACTGAGGAGTTTCATAGACTAATGTTGCCAGACTGTTTCGTTTACACAGATACTCCATCACCATTATTATGCTTGGGAGTGATCAAGGAATCTCTATCTGTTTTTCATTGCAGGCCTGATGGTGGGAAGCAACTATGCGACATATGGGCTATGAAAATGGGCTCTTGGGTGAGATCAAACACTGTTTTTCTGCCACTACATGGGCAAATAACAAGATCATTGAGCCTCTTTGATCATAAATTTCTCCTTGTAAGGCAGATTGAAGGGCTGGAAAACTATAGTCTGGCATTGTTTGATCCTGAACAGGATCGCATTGAGGATATTGGAATTGAATTGGGTTCTCATTGGGTTTATGCAGATTCTTATACGGAGAGTCTTCTTCTACTCTGA
Homology
[Close]
BLAST of CmoCh16G001170 vs. Swiss-Prot
Match: CPR30_ARATH (F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-18
Identity = 99/385 (25.71%), Postives = 174/385 (45.19%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKN--RISNSLLIINCSNTD 120
           P +I+ +I   LP K+L+R R++ K    L+  P F+ +HL    +  + L+I+      
Sbjct: 5   PMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALR 64

Query: 121 QKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPS 180
             S    V+ ++ +     E PMK   G    V GS NGL+ +S++       + ++NPS
Sbjct: 65  LYS----VDLDSLDSVSDVEHPMK--RGGPTEVFGSSNGLIGLSNSP----TDLAVFNPS 124

Query: 181 VRKSRLLPRGLIPKRDHCWPLNYLAF--GFNQAANDHIVLRIVRI-----EQWRCC--YQ 240
            R+   LP   I   D      Y+ +  G++  ++D+ V+R+V+      ++  C   Y+
Sbjct: 125 TRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYE 184

Query: 241 VEIYSLKSDCWRRVPSVPPIPTAL---DCRLLPK---SICFSGHVYWLVKHKNGGIP-NS 300
           V+++SLK + W+R+ SV      L      LL +    +     ++W++  + G I  N 
Sbjct: 185 VKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNL 244

Query: 301 VLCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMK- 360
           ++ FD+A EEF  +  P+  V        + +GV+   L +  C  D  +   D+W MK 
Sbjct: 245 IVRFDLALEEFEIVRFPEA-VANGNVDIQMDIGVLDGCLCLM-CNYD--QSYVDVWMMKE 304

Query: 361 ---MGSWVRSNTVFLPLHGQITRSLSLFDHKFLLV------RQIEGLENYSLALFDPEQD 418
                SW +  TV  P      +S+  F +   LV      + +  L N  L  FD E  
Sbjct: 305 YNVRDSWTKVFTVQKP------KSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESK 364

[Close]
BLAST of CmoCh16G001170 vs. Swiss-Prot
Match: FBLK2_ARATH (Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana GN=At1g11620 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.0e-17
Identity = 86/310 (27.74%), Postives = 137/310 (44.19%), Query Frame = 1 

Query: 62  TEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNR--ISNSLLIINCSNTDQ 121
           ++++ EILS +P +SL+R RS CK+W  L+ +P FVN HL +         + N  +   
Sbjct: 8   SDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVFNNEHIVS 67

Query: 122 K---SCFSLVNAETFN--ETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVDPIHI 181
               S  S V  + FN  E    +LP        +++      L+ ++ + LL  +P+  
Sbjct: 68  PLFGSTTSYVGID-FNKPENCGVKLPFPIALSPAINISHCDGLLLYVTKSMLLVANPLLS 127

Query: 182 WNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAAN--DHIVLRIVRIEQWRC----CY 241
               ++ S           DH      L + FNQ++   D+ V+R      +RC      
Sbjct: 128 QKRWIKCSEGF--------DHSMDAYGLGYLFNQSSGFYDYKVVR------FRCGIKNSS 187

Query: 242 QVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCFDM 301
           +VE+Y+ KSD W+ V  V       D  L   S+C  G  YWL  +K+G    S+  FD 
Sbjct: 188 RVEVYAFKSDSWKVV--VDTNFGGFD-GLPLSSVCLRGTPYWLGYNKSGNELMSIQSFDF 247

Query: 302 ATEEFHRLMLPDCFVYTDTPSPLLCLGVIK-ESLS-VFHCRPDGGKQLC--DIWAMKMGS 355
           + E F  L LP   + +      + LG+ + + LS +  C      + C   +W MK   
Sbjct: 248 SKERFEPLFLPPQSIGSRNLVKYISLGIFRGDQLSLLLECH-----ETCKLHLWVMKKQH 294

[Close]
BLAST of CmoCh16G001170 vs. Swiss-Prot
Match: FBK26_ARATH (Putative F-box/kelch-repeat protein At1g62270 OS=Arabidopsis thaliana GN=At1g62270 PE=3 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-15
Identity = 92/378 (24.34%), Postives = 158/378 (41.80%), Query Frame = 1 

Query: 57  FVNCPTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNSLLIINCSN 116
           F + P +++ +IL+ +P  SL R RS CK+WN L    +F   H        L++I    
Sbjct: 9   FSSLPWDLVEDILARVPATSLKRLRSTCKQWNFLFNDQIFTKMHFDKAEKQFLVLILRLY 68

Query: 117 TDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSH--------------NG-LVCI 176
           T    C   ++    ++ +   + +K     +LS+I  H              NG L+C 
Sbjct: 69  T---VCSMSLDLRGLHDNIDPSIEVKG----ELSLIDPHCSSRKTFVSKVFHCNGLLLCT 128

Query: 177 SSASLLDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRI 236
           +   L+      +WNP   ++R +   +   R+  + L Y   G  ++  ++ +++ + +
Sbjct: 129 TMTGLV------VWNPCTDQTRWIKTEVPHNRNDKYALGY---GNYKSCYNYKIMKFLDL 188

Query: 237 EQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPN 296
           E     + +EIY + S+ WR + +V P  T     L  + +   G+ YW+  HK   I  
Sbjct: 189 ES----FDLEIYEVNSNSWRVLGTVTPDFT---IPLDAEGVSLRGNSYWIASHKREEIEE 248

Query: 297 S------------VLCFDMATEEF-HRLMLP-DCFVYTDTPSPLLCLGVIKESLSVFHCR 356
                        ++ FD  TE F  R+ LP  C    DT S L C  V +E LS+F   
Sbjct: 249 EEEEENEYFINDFLISFDFTTERFGPRVSLPFKCESSWDTIS-LSC--VREERLSLFF-- 308

Query: 357 PDGGKQLCDIWAMKMGSWVRSNTVFLPLHGQITRSLSLFDHKF-LLVRQIEGLENYSLAL 405
            D G    +IW     +   + T  +     +   L  + H+F   V  +   EN  +  
Sbjct: 309 QDDGTLKMEIW--MTNNITETKTTTMSWSPFLKIDLYTYGHRFGNEVSFLVDEENKVIVC 356

[Close]
BLAST of CmoCh16G001170 vs. Swiss-Prot
Match: FBK65_ARATH (Putative F-box/kelch-repeat protein At3g22730 OS=Arabidopsis thaliana GN=At3g22730 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-15
Identity = 82/314 (26.11%), Postives = 122/314 (38.85%), Query Frame = 1 

Query: 63  EILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNSLLIINCSNTDQKSC 122
           +++ EILS +P  SL R RS CK WN L + P F           SL+++     +   C
Sbjct: 9   DLVEEILSRVPATSLKRLRSTCKLWNALFKNPGFTKKQFLKAPKESLVLM---LKEYSVC 68

Query: 123 FSLVNAETFNETL--RSELPMKANTGYKLSVIGSHNGLVCISSASLLDVD-PIHIWNPSV 182
             + N      ++  +  L +K    Y    +  H    C        +D  I +WNP +
Sbjct: 69  PMIANLSVSAPSIEFKGALNLKNYPPYS-EEVDIHEACHCDGLLLCTTMDYRIVVWNPCL 128

Query: 183 RKSRLLPRGLIPKRDHCWPLN-YLAFGFNQAANDHIVLRIVRIEQWRC----------CY 242
            ++R +           WP N Y  F      N +   RI +I   RC            
Sbjct: 129 GETRWIR----------WPKNIYSRFALGYEKNKY--GRIYKI--LRCWDRHNSPTGRVD 188

Query: 243 QVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK-SICFSGHVYWLVKHKNGGIPNSVLCFD 302
           + EIY   SD WR +  V     ALDC +     + F G+ YWL   K       +LCFD
Sbjct: 189 EFEIYEFSSDSWRVLDLV-----ALDCHIASHIGVSFKGNTYWLASDKKDKY-GLLLCFD 248

Query: 303 MATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMGS--- 358
             TE F RL LP            + L V+         + D   ++ ++W   +     
Sbjct: 249 FTTERFTRLCLP-----PSQDVSKMALSVVGGKQLSLLSQSDSTSKIMEMWVTNIIEDVL 293

[Close]
BLAST of CmoCh16G001170 vs. Swiss-Prot
Match: FBK2_ARATH (Putative F-box/kelch-repeat protein At1g12870 OS=Arabidopsis thaliana GN=At1g12870 PE=3 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-14
Identity = 77/312 (24.68%), Postives = 136/312 (43.59%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLK----NRISNS--LLIINC 120
           P +++ EI   LPVK+L+RF+S+ K+W   ++   F   HLK    + + +   ++I   
Sbjct: 34  PDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMIITEK 93

Query: 121 SNTDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVDPIHI 180
            N D +  F  ++ E+ +    +         + +    S +G+ CI S    D   I++
Sbjct: 94  WNPDIEISFRTISLESVSFLSSALFNFPRGFHHPIYASESCDGIFCIHSPKTQD---IYV 153

Query: 181 WNPSVRKSRLLP--------RGLIPKRD---HCWPLNYLAFGFNQAANDHIVLRIVRIEQ 240
            NP+ R  R LP          L P  D      P+N+LAF     A D+ ++ +   + 
Sbjct: 154 VNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNHLAF---VKATDYKLVWLYNSDA 213

Query: 241 WRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSV 300
            R   + E++  K++ WR +  +P      D     K    +G +YW  +  N  I   V
Sbjct: 214 SRVT-KCEVFDFKANAWRYLTCIPSYRIYHD----QKPASANGTLYWFTETYNAEI--KV 273

Query: 301 LCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMG 354
           +  D+ TE F  L  P     ++     +C  +I  SL ++    D  K + +IW +K  
Sbjct: 274 IALDIHTEIFRLLPKPSLIASSEPSHIDMC--IIDNSLCMYETEGD-KKIIQEIWRLKSS 329

[Close]
BLAST of CmoCh16G001170 vs. TrEMBL
Match: A0A0A0L5Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183340 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 3.0e-180
Identity = 306/374 (81.82%), Postives = 329/374 (87.97%), Query Frame = 1 

Query: 47  MRVAQDDHKVFVNCPTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRIS 106
           MRV  D H VFVNCPTEILIEILSYLPVKSLLRFR VCKEWNKLVQ PLFVNAHL+ RI 
Sbjct: 1   MRVLLDSHDVFVNCPTEILIEILSYLPVKSLLRFRCVCKEWNKLVQNPLFVNAHLEKRIP 60

Query: 107 NSLLIINCSNTDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASL 166
           NSLLIIN S TDQK+CFSLVNAETFNET RSE+PMKAN GYKLSV GS+NGLVCISSASL
Sbjct: 61  NSLLIINSSPTDQKACFSLVNAETFNETFRSEIPMKANLGYKLSVCGSYNGLVCISSASL 120

Query: 167 LDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRC 226
           LDVDPI+IWNPSVRK+RLLP  LIPK DHCWPLNYLAFGF+QA NDHIVLRIVRIEQW C
Sbjct: 121 LDVDPIYIWNPSVRKTRLLPSSLIPKWDHCWPLNYLAFGFHQATNDHIVLRIVRIEQWSC 180

Query: 227 CYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCF 286
           CYQVEIYSLK+DCWRRV SVP IPTALDCRLL KSIC +G +YW+VKHKNGGIPNS+L F
Sbjct: 181 CYQVEIYSLKADCWRRVSSVPTIPTALDCRLLSKSICSNGLIYWIVKHKNGGIPNSILSF 240

Query: 287 DMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDG--GKQLCDIWAMKMGS 346
           D+ATEEFHRLMLPDC VY DTP   LCLGV++ESLS+FHCRPDG  GKQ+CD WA+KMGS
Sbjct: 241 DIATEEFHRLMLPDCLVYIDTPP--LCLGVVQESLSIFHCRPDGGNGKQVCDTWALKMGS 300

Query: 347 WVRSNTVFLPLHGQITRSLSLFDHKFLLVRQIEGLENYSLALFDPEQDRIEDIGIELGSH 406
           WVR N++ LPLHG+ITR  SL D+KFL VRQIE + N SLAL D E DRIEDIGIELGSH
Sbjct: 301 WVRLNSIVLPLHGKITRPWSLLDYKFLTVRQIEEMGNPSLALVDTELDRIEDIGIELGSH 360

Query: 407 WVYADSYTESLLLL 419
           WVYADSY ESLLLL
Sbjct: 361 WVYADSYKESLLLL 372

[Close]
BLAST of CmoCh16G001170 vs. TrEMBL
Match: B1P2G7_9ROSA (S-haplotype-specific F-box protein OS=Prunus pseudocerasus GN=SFB PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.6e-38
Identity = 131/392 (33.42%), Postives = 194/392 (49.49%), Query Frame = 1 

Query: 57  FVNCPTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISN----SLLII 116
           F  C  EILI+IL  LP KSL+RF   CK W  L+    FV  HL   ++     SLL +
Sbjct: 3   FTLCKKEILIDILVRLPAKSLVRFLCTCKSWMDLIGSSSFVRTHLHRNVTKHAHVSLLCL 62

Query: 117 NCSNTD-----------QKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCI 176
           +  + +           Q+  +SL   ETF    +   P+ +   Y   + GS NGLVCI
Sbjct: 63  HHQSFECQVDPDDPYVGQELQWSLFCNETFELCSKLSHPLGSTEHY--GIYGSSNGLVCI 122

Query: 177 SSASLLDVDPIHIWNPSVRKSRLLP--RGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIV 236
           S   L    PI+IWNPSVRK R  P    +  K  H      L FGF+   ND+ V+R++
Sbjct: 123 SDDILNFDSPIYIWNPSVRKLRTPPISSNINIKFSHV----ALQFGFHPGVNDYKVVRMM 182

Query: 237 RIEQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKS-ICFSGHVYWLVKHKNGG 296
           R    +    VE+YSL++D W+ + ++PP    L C     + I  +G  Y L++    G
Sbjct: 183 RTN--KNALAVEVYSLRTDSWKMIEAIPP---WLKCTWQDHTGIFLNGVAYHLIEK---G 242

Query: 297 IPNSVLCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKES----LSVFHCRPDGGKQL 356
              S++ FD  +EEF   + PD       PS  LC+GV KE     L  + C  +G  ++
Sbjct: 243 RIFSIMSFDTGSEEFGEFITPDAI---SNPSD-LCIGVYKEQICLLLDFYPCEVEGMDKI 302

Query: 357 CDIWAMKMGSWVRSNTVFLPLHGQITRSLSLFDHKFLLVR--QIEGLENYSLALFDPEQD 416
            D+W ++   W +S   F+PL    T  +S+ D+K L++R   I G+ +  L L D E  
Sbjct: 303 -DLWILQEKRWKQSRPFFIPLGYYCTIGISI-DNKLLMLRIDDIGGIAD--LHLCDYESK 362

Query: 417 RIEDIGIELGS------HWVYADSYTESLLLL 419
            + + GI+L +        +++ SY ESL+LL
Sbjct: 363 EVLETGIKLATMKYGEIELLFSFSYIESLVLL 372

[Close]
BLAST of CmoCh16G001170 vs. TrEMBL
Match: Q09HU7_PRUAR (S14 F-box protein (Fragment) OS=Prunus armeniaca PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.4e-38
Identity = 125/387 (32.30%), Postives = 194/387 (50.13%), Query Frame = 1 

Query: 63  EILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNS----LLIINCSNTD 122
           EILI+IL  LP KSL+RF S CK W+ L+   +FV+ HL   ++      LL ++  N +
Sbjct: 9   EILIDILVRLPAKSLIRFLSTCKSWSDLIGSSIFVSTHLCRNVTKHTHVYLLCLHHPNFE 68

Query: 123 Q-----------KSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLL 182
           +           +  +SL   ETF E  +   P+     Y   + GS NGLVCIS   L 
Sbjct: 69  RLVDPNDPYLKKEFQWSLFPKETFEECYKLSHPLGMTEHY--GIYGSSNGLVCISDEILN 128

Query: 183 DVDPIHIWNPSVRKSRLLPRGL-IPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRC 242
              PIHIWNPSVRK R LP    I  +  C  L    FGF+   ND+  +R++R    + 
Sbjct: 129 FDSPIHIWNPSVRKFRALPMSTNINIKFSCVALQ---FGFHPGVNDYKAVRMMRTN--KS 188

Query: 243 CYQVEIYSLKSDCWRRVPSVPPIPTALDCRL-LPKSICFSGHVYWLVKHKNGGIPNSVLC 302
              VE+YSLK D W+ + ++PP    L C L   +   FSG  Y +++    G   S++ 
Sbjct: 189 ALAVEVYSLKRDSWKMIEAIPP---WLKCTLEHHRGTFFSGVAYHIIQK---GPMLSIMS 248

Query: 303 FDMATEEFHRLMLPDCF-----VYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAM 362
           FD  +E+F  ++ PD       +Y D     +CL      L + +   + G +  D+W +
Sbjct: 249 FDSGSEKFEEIIAPDAICSLWGLYIDVYKEQICL------LFICYGCEEEGMEKADLWVL 308

Query: 363 KMGSWVR-SNTVFLPLHGQITRSLSLFDHKFLLVR--QIEGLENYSLALFDPEQDRIEDI 419
           +   W + S  ++ P +   T  +S+ D+K L++R   I G+ N  L L D E +++ + 
Sbjct: 309 QEKRWKQLSPFIYPPDYYYCTTGISM-DNKILMLRVDDIRGIRN--LDLCDYESNQVLET 368

[Close]
BLAST of CmoCh16G001170 vs. TrEMBL
Match: B8XPZ1_PRUDU (S-haplotype-specific F-box protein OS=Prunus dulcis GN=SFB PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36
Identity = 121/386 (31.35%), Postives = 189/386 (48.96%), Query Frame = 1 

Query: 63  EILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNS----LLIINCSNTD 122
           EILI+IL  LP KSL+RF   CK W+ L+    FV+ HL+  ++      LL ++  N +
Sbjct: 9   EILIDILVRLPAKSLIRFLCTCKFWSDLIGSSSFVSTHLRRNVTQQAHVYLLCLHHPNVE 68

Query: 123 -----------QKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLL 182
                      Q+  +SL + ETF E  +   P+ +   Y   + GS NGLVCIS   L 
Sbjct: 69  RQADPDDPYVEQEFHWSLFSKETFKECSKLSYPLGSTEQY-YGIYGSSNGLVCISDEILN 128

Query: 183 DVDPIHIWNPSVRKSRLLP--RGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWR 242
              PIHIWNPSVRK R  P    +  K  H      L FGF+   ND+ V+R++R    +
Sbjct: 129 FDSPIHIWNPSVRKLRTPPISTNINMKFSHV----ALQFGFHPRVNDYKVVRMMRTN--K 188

Query: 243 CCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLL-PKSICFSGHVYWLVKHKNGGIPNSVL 302
               VE+YSL++D WR + ++PP    L C     K   F+G  Y +++    G   S++
Sbjct: 189 NALAVEVYSLRTDSWRMIEAIPP---WLKCTWQHHKCTFFNGVAYHIIQK---GPIFSIM 248

Query: 303 CFDMATEEFHRLMLPD-----CFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWA 362
             D  +EEF   + PD     C +Y D     +CL         + C  +G +++ D+W 
Sbjct: 249 SLDSGSEEFEEFIAPDAICRPCELYIDVYKEQICL-----LFDYYPCEEEGMEKM-DLWV 308

Query: 363 MKMGSWVRSNTVFLPL-HGQITRSLSLFDHKFLLVRQIEGLENYSLALFDPEQDRIEDIG 419
           ++   W +      P  +   T  +S+ D+K L++R+ + +    L L D E  ++ + G
Sbjct: 309 LQEKRWKQLCPFIYPWDYYHRTVGISI-DNKILMLRRDDIMGTVDLHLCDYESKQVLETG 368

[Close]
BLAST of CmoCh16G001170 vs. TrEMBL
Match: M5WZQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025214mg PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36
Identity = 118/378 (31.22%), Postives = 192/378 (50.79%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLK---NRISNS--LLIINCS 120
           P EI+ +IL  LP+KSLLR  S+CK WN L++   F+N HL    ++ SNS  LL+ +C 
Sbjct: 6   PPEIITQILLRLPIKSLLRCTSICKSWNSLIKHTRFINNHLNLNLDKTSNSPLLLLRHCP 65

Query: 121 NTDQKSCFSL-VNAETFNETLRSELPMKA-NTGYKLSVIGSHNGLVCISSASLLDVDPIH 180
               +  +SL ++  +F E  + ELP+++ N  ++  ++GS NGL+ +S   L D +   
Sbjct: 66  KDPTRELYSLHLDNGSFQEHSKPELPVQSLNECFR--IVGSCNGLILLSDDYLTDYNMFV 125

Query: 181 IWNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQ--WRCCYQVE 240
           +WNPS+RK   L +  +PK  H    +   FGF+   ND+ V+R+V + Q     C ++E
Sbjct: 126 LWNPSIRKFITLAKPHVPKSPH---HSVYGFGFDSKKNDYKVVRLVYLHQNEGHACPEIE 185

Query: 241 IYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGG-IPNSVLCFDMAT 300
           +YSL S  W+ + S    P+ L  +     +  +G V+W+   K G    N VL FDM+ 
Sbjct: 186 LYSLNSGSWKSITSA--APSYLIAQNFWGQVFVNGAVHWVASCKKGNCFRNMVLSFDMSN 245

Query: 301 EEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMK----MGSWV 360
           E F  + LP+     + P+  + +    +S+ V H   D  K    +W ++    + SW 
Sbjct: 246 ETFQEIELPEDLA-CELPTKYMAISAAGKSICVKHF--DQNKH--TMWVLREYRVVESWE 305

Query: 361 RSNTVFLPLHGQIT-RSLSLF-----DHKFLLVRQIEGLENYSLALFDPEQDRIEDIGIE 419
           +   V + +HG    R L +      + +FLL R   G +       +P+ +  E +GI 
Sbjct: 306 KQ--VSIDVHGTPNFRVLQVLGCRKNNGEFLLERYDHGRKIGEFVSHNPKNNTNECLGIH 365

[Close]
BLAST of CmoCh16G001170 vs. TAIR10
Match: AT4G12560.1 (AT4G12560.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 95.5 bits (236), Expect = 8.2e-20
Identity = 99/385 (25.71%), Postives = 174/385 (45.19%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKN--RISNSLLIINCSNTD 120
           P +I+ +I   LP K+L+R R++ K    L+  P F+ +HL    +  + L+I+      
Sbjct: 5   PMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALR 64

Query: 121 QKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVDPIHIWNPS 180
             S    V+ ++ +     E PMK   G    V GS NGL+ +S++       + ++NPS
Sbjct: 65  LYS----VDLDSLDSVSDVEHPMK--RGGPTEVFGSSNGLIGLSNSP----TDLAVFNPS 124

Query: 181 VRKSRLLPRGLIPKRDHCWPLNYLAF--GFNQAANDHIVLRIVRI-----EQWRCC--YQ 240
            R+   LP   I   D      Y+ +  G++  ++D+ V+R+V+      ++  C   Y+
Sbjct: 125 TRQIHRLPPSSIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYE 184

Query: 241 VEIYSLKSDCWRRVPSVPPIPTAL---DCRLLPK---SICFSGHVYWLVKHKNGGIP-NS 300
           V+++SLK + W+R+ SV      L      LL +    +     ++W++  + G I  N 
Sbjct: 185 VKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNL 244

Query: 301 VLCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMK- 360
           ++ FD+A EEF  +  P+  V        + +GV+   L +  C  D  +   D+W MK 
Sbjct: 245 IVRFDLALEEFEIVRFPEA-VANGNVDIQMDIGVLDGCLCLM-CNYD--QSYVDVWMMKE 304

Query: 361 ---MGSWVRSNTVFLPLHGQITRSLSLFDHKFLLV------RQIEGLENYSLALFDPEQD 418
                SW +  TV  P      +S+  F +   LV      + +  L N  L  FD E  
Sbjct: 305 YNVRDSWTKVFTVQKP------KSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESK 364

[Close]
BLAST of CmoCh16G001170 vs. TAIR10
Match: AT1G11620.1 (AT1G11620.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 89.7 bits (221), Expect = 4.5e-18
Identity = 86/310 (27.74%), Postives = 137/310 (44.19%), Query Frame = 1 

Query: 62  TEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNR--ISNSLLIINCSNTDQ 121
           ++++ EILS +P +SL+R RS CK+W  L+ +P FVN HL +         + N  +   
Sbjct: 8   SDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVFNNEHIVS 67

Query: 122 K---SCFSLVNAETFN--ETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVDPIHI 181
               S  S V  + FN  E    +LP        +++      L+ ++ + LL  +P+  
Sbjct: 68  PLFGSTTSYVGID-FNKPENCGVKLPFPIALSPAINISHCDGLLLYVTKSMLLVANPLLS 127

Query: 182 WNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAAN--DHIVLRIVRIEQWRC----CY 241
               ++ S           DH      L + FNQ++   D+ V+R      +RC      
Sbjct: 128 QKRWIKCSEGF--------DHSMDAYGLGYLFNQSSGFYDYKVVR------FRCGIKNSS 187

Query: 242 QVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCFDM 301
           +VE+Y+ KSD W+ V  V       D  L   S+C  G  YWL  +K+G    S+  FD 
Sbjct: 188 RVEVYAFKSDSWKVV--VDTNFGGFD-GLPLSSVCLRGTPYWLGYNKSGNELMSIQSFDF 247

Query: 302 ATEEFHRLMLPDCFVYTDTPSPLLCLGVIK-ESLS-VFHCRPDGGKQLC--DIWAMKMGS 355
           + E F  L LP   + +      + LG+ + + LS +  C      + C   +W MK   
Sbjct: 248 SKERFEPLFLPPQSIGSRNLVKYISLGIFRGDQLSLLLECH-----ETCKLHLWVMKKQH 294

[Close]
BLAST of CmoCh16G001170 vs. TAIR10
Match: AT1G62270.1 (AT1G62270.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 85.9 bits (211), Expect = 6.5e-17
Identity = 92/378 (24.34%), Postives = 158/378 (41.80%), Query Frame = 1 

Query: 57  FVNCPTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNSLLIINCSN 116
           F + P +++ +IL+ +P  SL R RS CK+WN L    +F   H        L++I    
Sbjct: 9   FSSLPWDLVEDILARVPATSLKRLRSTCKQWNFLFNDQIFTKMHFDKAEKQFLVLILRLY 68

Query: 117 TDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSH--------------NG-LVCI 176
           T    C   ++    ++ +   + +K     +LS+I  H              NG L+C 
Sbjct: 69  T---VCSMSLDLRGLHDNIDPSIEVKG----ELSLIDPHCSSRKTFVSKVFHCNGLLLCT 128

Query: 177 SSASLLDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRI 236
           +   L+      +WNP   ++R +   +   R+  + L Y   G  ++  ++ +++ + +
Sbjct: 129 TMTGLV------VWNPCTDQTRWIKTEVPHNRNDKYALGY---GNYKSCYNYKIMKFLDL 188

Query: 237 EQWRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPN 296
           E     + +EIY + S+ WR + +V P  T     L  + +   G+ YW+  HK   I  
Sbjct: 189 ES----FDLEIYEVNSNSWRVLGTVTPDFT---IPLDAEGVSLRGNSYWIASHKREEIEE 248

Query: 297 S------------VLCFDMATEEF-HRLMLP-DCFVYTDTPSPLLCLGVIKESLSVFHCR 356
                        ++ FD  TE F  R+ LP  C    DT S L C  V +E LS+F   
Sbjct: 249 EEEEENEYFINDFLISFDFTTERFGPRVSLPFKCESSWDTIS-LSC--VREERLSLFF-- 308

Query: 357 PDGGKQLCDIWAMKMGSWVRSNTVFLPLHGQITRSLSLFDHKF-LLVRQIEGLENYSLAL 405
            D G    +IW     +   + T  +     +   L  + H+F   V  +   EN  +  
Sbjct: 309 QDDGTLKMEIW--MTNNITETKTTTMSWSPFLKIDLYTYGHRFGNEVSFLVDEENKVIVC 356

[Close]
BLAST of CmoCh16G001170 vs. TAIR10
Match: AT3G22730.1 (AT3G22730.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 85.9 bits (211), Expect = 6.5e-17
Identity = 82/314 (26.11%), Postives = 122/314 (38.85%), Query Frame = 1 

Query: 63  EILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNSLLIINCSNTDQKSC 122
           +++ EILS +P  SL R RS CK WN L + P F           SL+++     +   C
Sbjct: 9   DLVEEILSRVPATSLKRLRSTCKLWNALFKNPGFTKKQFLKAPKESLVLM---LKEYSVC 68

Query: 123 FSLVNAETFNETL--RSELPMKANTGYKLSVIGSHNGLVCISSASLLDVD-PIHIWNPSV 182
             + N      ++  +  L +K    Y    +  H    C        +D  I +WNP +
Sbjct: 69  PMIANLSVSAPSIEFKGALNLKNYPPYS-EEVDIHEACHCDGLLLCTTMDYRIVVWNPCL 128

Query: 183 RKSRLLPRGLIPKRDHCWPLN-YLAFGFNQAANDHIVLRIVRIEQWRC----------CY 242
            ++R +           WP N Y  F      N +   RI +I   RC            
Sbjct: 129 GETRWIR----------WPKNIYSRFALGYEKNKY--GRIYKI--LRCWDRHNSPTGRVD 188

Query: 243 QVEIYSLKSDCWRRVPSVPPIPTALDCRLLPK-SICFSGHVYWLVKHKNGGIPNSVLCFD 302
           + EIY   SD WR +  V     ALDC +     + F G+ YWL   K       +LCFD
Sbjct: 189 EFEIYEFSSDSWRVLDLV-----ALDCHIASHIGVSFKGNTYWLASDKKDKY-GLLLCFD 248

Query: 303 MATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMGS--- 358
             TE F RL LP            + L V+         + D   ++ ++W   +     
Sbjct: 249 FTTERFTRLCLP-----PSQDVSKMALSVVGGKQLSLLSQSDSTSKIMEMWVTNIIEDVL 293

[Close]
BLAST of CmoCh16G001170 vs. TAIR10
Match: AT1G12870.1 (AT1G12870.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 82.0 bits (201), Expect = 9.4e-16
Identity = 77/312 (24.68%), Postives = 136/312 (43.59%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLK----NRISNS--LLIINC 120
           P +++ EI   LPVK+L+RF+S+ K+W   ++   F   HLK    + + +   ++I   
Sbjct: 34  PDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMIITEK 93

Query: 121 SNTDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVDPIHI 180
            N D +  F  ++ E+ +    +         + +    S +G+ CI S    D   I++
Sbjct: 94  WNPDIEISFRTISLESVSFLSSALFNFPRGFHHPIYASESCDGIFCIHSPKTQD---IYV 153

Query: 181 WNPSVRKSRLLP--------RGLIPKRD---HCWPLNYLAFGFNQAANDHIVLRIVRIEQ 240
            NP+ R  R LP          L P  D      P+N+LAF     A D+ ++ +   + 
Sbjct: 154 VNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNHLAF---VKATDYKLVWLYNSDA 213

Query: 241 WRCCYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSV 300
            R   + E++  K++ WR +  +P      D     K    +G +YW  +  N  I   V
Sbjct: 214 SRVT-KCEVFDFKANAWRYLTCIPSYRIYHD----QKPASANGTLYWFTETYNAEI--KV 273

Query: 301 LCFDMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMG 354
           +  D+ TE F  L  P     ++     +C  +I  SL ++    D  K + +IW +K  
Sbjct: 274 IALDIHTEIFRLLPKPSLIASSEPSHIDMC--IIDNSLCMYETEGD-KKIIQEIWRLKSS 329

[Close]
BLAST of CmoCh16G001170 vs. NCBI nr
Match: gi|449446143|ref|XP_004140831.1| (PREDICTED: F-box/kelch-repeat protein At3g23880 [Cucumis sativus])

HSP 1 Score: 639.4 bits (1648), Expect = 4.3e-180
Identity = 306/374 (81.82%), Postives = 329/374 (87.97%), Query Frame = 1 

Query: 47  MRVAQDDHKVFVNCPTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRIS 106
           MRV  D H VFVNCPTEILIEILSYLPVKSLLRFR VCKEWNKLVQ PLFVNAHL+ RI 
Sbjct: 1   MRVLLDSHDVFVNCPTEILIEILSYLPVKSLLRFRCVCKEWNKLVQNPLFVNAHLEKRIP 60

Query: 107 NSLLIINCSNTDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASL 166
           NSLLIIN S TDQK+CFSLVNAETFNET RSE+PMKAN GYKLSV GS+NGLVCISSASL
Sbjct: 61  NSLLIINSSPTDQKACFSLVNAETFNETFRSEIPMKANLGYKLSVCGSYNGLVCISSASL 120

Query: 167 LDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRC 226
           LDVDPI+IWNPSVRK+RLLP  LIPK DHCWPLNYLAFGF+QA NDHIVLRIVRIEQW C
Sbjct: 121 LDVDPIYIWNPSVRKTRLLPSSLIPKWDHCWPLNYLAFGFHQATNDHIVLRIVRIEQWSC 180

Query: 227 CYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCF 286
           CYQVEIYSLK+DCWRRV SVP IPTALDCRLL KSIC +G +YW+VKHKNGGIPNS+L F
Sbjct: 181 CYQVEIYSLKADCWRRVSSVPTIPTALDCRLLSKSICSNGLIYWIVKHKNGGIPNSILSF 240

Query: 287 DMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDG--GKQLCDIWAMKMGS 346
           D+ATEEFHRLMLPDC VY DTP   LCLGV++ESLS+FHCRPDG  GKQ+CD WA+KMGS
Sbjct: 241 DIATEEFHRLMLPDCLVYIDTPP--LCLGVVQESLSIFHCRPDGGNGKQVCDTWALKMGS 300

Query: 347 WVRSNTVFLPLHGQITRSLSLFDHKFLLVRQIEGLENYSLALFDPEQDRIEDIGIELGSH 406
           WVR N++ LPLHG+ITR  SL D+KFL VRQIE + N SLAL D E DRIEDIGIELGSH
Sbjct: 301 WVRLNSIVLPLHGKITRPWSLLDYKFLTVRQIEEMGNPSLALVDTELDRIEDIGIELGSH 360

Query: 407 WVYADSYTESLLLL 419
           WVYADSY ESLLLL
Sbjct: 361 WVYADSYKESLLLL 372

[Close]
BLAST of CmoCh16G001170 vs. NCBI nr
Match: gi|659077558|ref|XP_008439270.1| (PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis melo])

HSP 1 Score: 632.1 bits (1629), Expect = 6.9e-178
Identity = 303/374 (81.02%), Postives = 328/374 (87.70%), Query Frame = 1 

Query: 47  MRVAQDDHKVFVNCPTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRIS 106
           MRV  D H VFVNCPTEILIEILSYLPVKSLLRFR VCKEWNKLVQ PLF+NAHL+ RI 
Sbjct: 1   MRVLLDSHNVFVNCPTEILIEILSYLPVKSLLRFRCVCKEWNKLVQNPLFINAHLEKRIP 60

Query: 107 NSLLIINCSNTDQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASL 166
           NSLLIIN S TDQK+CFSL NAET NET +SELPMKAN GYKLSV GS+NGLVCISSASL
Sbjct: 61  NSLLIINSSTTDQKACFSLFNAETSNETFQSELPMKANLGYKLSVCGSYNGLVCISSASL 120

Query: 167 LDVDPIHIWNPSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRC 226
           LDVDPI+IWNPSVRK+RLLP  LIPKRDHCWPLN+LAFGF+QA NDHIVLRIVRIEQW C
Sbjct: 121 LDVDPIYIWNPSVRKTRLLPSSLIPKRDHCWPLNFLAFGFHQAKNDHIVLRIVRIEQWSC 180

Query: 227 CYQVEIYSLKSDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCF 286
           CY+VEIYSLK DCWRRV SVP IPTALDCRLL KSIC +G VYW+VKH+NGGIPNS+L F
Sbjct: 181 CYRVEIYSLKDDCWRRVSSVPTIPTALDCRLLSKSICSNGLVYWIVKHRNGGIPNSILSF 240

Query: 287 DMATEEFHRLMLPDCFVYTDTPSPLLCLGVIKESLSVFHCRPDG--GKQLCDIWAMKMGS 346
           D+ATEEFHRLMLPDC VY DTPSP LCLGV++ESLS+FHCRPDG  GKQLCD WA+KMGS
Sbjct: 241 DIATEEFHRLMLPDCLVYIDTPSP-LCLGVVQESLSIFHCRPDGGNGKQLCDTWALKMGS 300

Query: 347 WVRSNTVFLPLHGQITRSLSLFDHKFLLVRQIEGLENYSLALFDPEQDRIEDIGIELGSH 406
           WVR NT+ LPLHG+IT+  SL D+KFL+VRQIE + N  LAL D E D IEDIGIELGSH
Sbjct: 301 WVRLNTIVLPLHGRITK--SLLDYKFLIVRQIEEMGNSRLALVDTELDCIEDIGIELGSH 360

Query: 407 WVYADSYTESLLLL 419
           WVYADSY ESLLLL
Sbjct: 361 WVYADSYKESLLLL 371

[Close]
BLAST of CmoCh16G001170 vs. NCBI nr
Match: gi|645243589|ref|XP_008228043.1| (PREDICTED: F-box/kelch-repeat protein At3g23880-like [Prunus mume])

HSP 1 Score: 219.9 bits (559), Expect = 8.2e-54
Identity = 135/364 (37.09%), Postives = 202/364 (55.49%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLK-NRISNSLLIINCSNTDQ 120
           P EIL EI S L VKSLLR R VCK W  L+  P F+NAHLK N + N+   +       
Sbjct: 23  PQEILFEIFSRLSVKSLLRCRCVCKSWKSLISNPDFMNAHLKRNVLKNACDCLVIHTGYD 82

Query: 121 KSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDV-DPIHIWNPS 180
            S FS+ +AE F +    ELP   +  Y  +V GS NG++CIS+A  +++  PI++ NPS
Sbjct: 83  VSGFSVYDAEEFTKRFDLELPRPKHVSY--AVYGSCNGVLCISAAWRVNLASPIYLLNPS 142

Query: 181 VRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRCCYQVEIYSLKSD 240
           +R  + LP   I +  H      L FGF++  +D+ V+R+VR  + +  + VE+YSL+ D
Sbjct: 143 IRVFKKLPDCHILQTAH---FVTLGFGFHERGDDYKVVRVVRFPRKKDFFAVEVYSLRLD 202

Query: 241 CWRRVPSVPPIPTALDCRL-LPKSICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLM 300
            W R+ + PP+  +   R   PK + F+G +YW+    +     S++ FD+ +E F ++M
Sbjct: 203 TWTRITATPPV--SKQARFPQPKCLFFNGFLYWITVEPSQHC-TSIVSFDLDSEVFQKIM 262

Query: 301 LPD-CFVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMGSWVRSNTVFLPLH 360
           LPD  F     P+    + V +ESLS+FH R D     CDIW ++  +W  + T+  P  
Sbjct: 263 LPDILFGVASVPT----VQVFEESLSLFHQRKDDNVWYCDIWLVEADTWTMNRTILFPRC 322

Query: 361 GQITRSLSL-FDHKFLLVRQIEGLE-NYSLALFDPEQDRIEDIGIELGSHWVYADSYTES 419
             +   L +  D+KF LVR +  ++ +  L L DP   R +D GI L  H  + D+Y ES
Sbjct: 323 ESVAWPLGIRTDNKFHLVRHVRNMQRDPILVLCDPVLQRAKDTGISLSYHSQFVDAYRES 374

[Close]
BLAST of CmoCh16G001170 vs. NCBI nr
Match: gi|694428623|ref|XP_009341870.1| (PREDICTED: F-box/kelch-repeat protein At3g06240-like [Pyrus x bretschneideri])

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 135/368 (36.68%), Postives = 201/368 (54.62%), Query Frame = 1 

Query: 61  PTEILIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHL-KN--RISNSLLIINCSNT 120
           P EIL +IL+ LPVKSLLRF+ VCK WN L+  P F  AHL KN  R S   L++  +N 
Sbjct: 16  PEEILFKILARLPVKSLLRFKCVCKSWNTLISSPDFKTAHLGKNIMRDSYDYLLLRTANY 75

Query: 121 DQKSCFSLVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISS-ASLLDVDPIHIWN 180
                FSL   +T  + L  ELP + N   +++  GS NGL+C+S+       +PI++WN
Sbjct: 76  R----FSLCRRDTVAKCLDLELPEQENISLRIN--GSCNGLLCLSNHVGRCLRNPIYLWN 135

Query: 181 PSVRKSRLLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRCCYQVEIYSLK 240
           PS+RK + LP+GLI    H    +   FGF+   ND+ V+RIV     +C ++VE+YS++
Sbjct: 136 PSIRKFKRLPKGLI---QHTIRFDATGFGFHSGENDYKVVRIVSFLGEKCIFEVEVYSVR 195

Query: 241 SDCWRRVPSVPPIPTALDCRLLPKSICFSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRL 300
            D W+R+ +VPP+   +            G VYW+V   +    +S+L FD   E F ++
Sbjct: 196 LDAWKRISAVPPLSPNVSSFNTNSFAYIDGVVYWIVLDHSQQC-SSILSFDFVGEVFQKI 255

Query: 301 MLPDC------FVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMGSWVRSNT 360
           +LPD       F +T        +GV ++ +S+FH R DG    CDIW ++M +W    T
Sbjct: 256 VLPDKMGKGIEFFHTS-------IGVFEKLVSMFHYRQDGKDYYCDIWVLEMETWKMIRT 315

Query: 361 VFLPLHGQITRSLSLFDHKFLLVRQIEGLENYSLALFDPEQDRIEDIGIELGSHWVYADS 419
           + LP  G IT  L       + +  + G       L++PE  +++ +GI+L  H  Y  S
Sbjct: 316 IVLPERGWITWPLGFRATGGVHIAMLNG----DFVLYNPEPRQVKPLGIKL--HDGYVGS 360

[Close]
BLAST of CmoCh16G001170 vs. NCBI nr
Match: gi|658026509|ref|XP_008348679.1| (PREDICTED: F-box/kelch-repeat protein At3g23880-like [Malus domestica])

HSP 1 Score: 212.2 bits (539), Expect = 1.7e-51
Identity = 125/359 (34.82%), Postives = 202/359 (56.27%), Query Frame = 1 

Query: 65  LIEILSYLPVKSLLRFRSVCKEWNKLVQKPLFVNAHLKNRISNSLLIINCSNTDQKSCFS 124
           L++IL+ LPVKSLLRFR V K WN L+  P F+NAHLK+ +  +       +TD  +C S
Sbjct: 26  LVDILARLPVKSLLRFRCVYKSWNNLIISPSFINAHLKSNVVQNFCNHLLIHTDMSNCLS 85

Query: 125 LVNAETFNETLRSELPMKANTGYKLSVIGSHNGLVCISSASLLDVD-PIHIWNPSVRKSR 184
           L +AETF++ L  ELP      +   V GS NGLVCIS+++ + ++ P+++WNPS+R  +
Sbjct: 86  LFDAETFSKHLDLELP---GHDFGFVVHGSCNGLVCISNSAFMTLESPVYLWNPSIRNLK 145

Query: 185 LLPRGLIPKRDHCWPLNYLAFGFNQAANDHIVLRIVRIEQWRCCYQVEIYSLKSDCWRRV 244
            LP  L     H     +L FGF+   +++ V+R+ R    +  + +E+Y+++ +CWR +
Sbjct: 146 RLPNSL----QHTTVFVHLGFGFHSEVDNYRVVRVARFLCNKSIFGIEVYNIRLNCWRTI 205

Query: 245 PSVPPIPTALDCRLLPKSIC--FSGHVYWLVKHKNGGIPNSVLCFDMATEEFHRLMLPDC 304
            +VPP+    D   L +S C   +G VYW+ K  +   P S+L FD+ +E F ++ LP+ 
Sbjct: 206 TTVPPVSN--DVNFL-QSACXXLNGVVYWITKEPSQHSP-SILTFDLGSEVFQKIXLPET 265

Query: 305 FVYTDTPSPLLCLGVIKESLSVFHCRPDGGKQLCDIWAMKMGSWVRSNTVFLPLHGQITR 364
            V   T    + + V++ S+S+F  R D     CDI  +++ +W    T+  P + ++  
Sbjct: 266 TVEVPTD---VGIQVVENSVSLFQVRTDRLGLYCDISVLEVNTWKMMQTIIFP-YSKLAW 325

Query: 365 SLSL-FDHKFLLVRQIEGLENYSLALFDPEQDRIEDIGIELGSHWV-YADSYTESLLLL 419
            L +  D +  L  + +  ++  L LFDP+   I   GI L   ++ Y D Y ESL+LL
Sbjct: 326 PLGMEADGRLHLAIKGDNPDHPELVLFDPKSIEIRVTGIGLNCKYLAYVDVYIESLILL 369

The following BLAST results are available for this feature:
BLAST of CmoCh16G001170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CPR30_ARATH1.5e-1825.71F-box protein CPR30 OS=Arabidopsis thaliana GN=CPR30 PE=1 SV=2[more]
FBLK2_ARATH8.0e-1727.74Putative F-box/LRR-repeat/kelch-repeat protein At1g11620 OS=Arabidopsis thaliana... [more]
FBK26_ARATH1.2e-1524.34Putative F-box/kelch-repeat protein At1g62270 OS=Arabidopsis thaliana GN=At1g622... [more]
FBK65_ARATH1.2e-1526.11Putative F-box/kelch-repeat protein At3g22730 OS=Arabidopsis thaliana GN=At3g227... [more]
FBK2_ARATH1.7e-1424.68Putative F-box/kelch-repeat protein At1g12870 OS=Arabidopsis thaliana GN=At1g128... [more]
BLAST of CmoCh16G001170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Z4_CUCSA3.0e-18081.82Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183340 PE=4 SV=1[more]
B1P2G7_9ROSA2.6e-3833.42S-haplotype-specific F-box protein OS=Prunus pseudocerasus GN=SFB PE=2 SV=1[more]
Q09HU7_PRUAR4.4e-3832.30S14 F-box protein (Fragment) OS=Prunus armeniaca PE=4 SV=1[more]
B8XPZ1_PRUDU1.8e-3631.35S-haplotype-specific F-box protein OS=Prunus dulcis GN=SFB PE=2 SV=1[more]
M5WZQ2_PRUPE1.8e-3631.22Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025214mg PE=4 SV=1[more]
BLAST of CmoCh16G001170 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G12560.18.2e-2025.71 F-box and associated interaction domains-containing protein[more]
AT1G11620.14.5e-1827.74 F-box and associated interaction domains-containing protein[more]
AT1G62270.16.5e-1724.34 F-box and associated interaction domains-containing protein[more]
AT3G22730.16.5e-1726.11 F-box and associated interaction domains-containing protein[more]
AT1G12870.19.4e-1624.68 F-box and associated interaction domains-containing protein[more]
BLAST of CmoCh16G001170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446143|ref|XP_004140831.1|4.3e-18081.82PREDICTED: F-box/kelch-repeat protein At3g23880 [Cucumis sativus][more]
gi|659077558|ref|XP_008439270.1|6.9e-17881.02PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis melo][more]
gi|645243589|ref|XP_008228043.1|8.2e-5437.09PREDICTED: F-box/kelch-repeat protein At3g23880-like [Prunus mume][more]
gi|694428623|ref|XP_009341870.1|1.1e-5336.68PREDICTED: F-box/kelch-repeat protein At3g06240-like [Pyrus x bretschneideri][more]
gi|658026509|ref|XP_008348679.1|1.7e-5134.82PREDICTED: F-box/kelch-repeat protein At3g23880-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR006527F-box-assoc_dom_typ1
IPR011043Gal_Oxase/kelch_b-propeller
IPR015915Kelch-typ_b-propeller
IPR017451F-box-assoc_interact_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G001170.1CmoCh16G001170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 61..94
score: 2.
IPR001810F-box domainSMARTSM00256fbox_2coord: 60..100
score: 2.
IPR001810F-box domainPROFILEPS50181FBOXcoord: 54..104
score: 12
IPR001810F-box domainunknownSSF81383F-box domaincoord: 61..113
score: 8.9
IPR006527F-box associated domain, type 1PFAMPF07734FBA_1coord: 262..345
score: 4.
IPR011043Galactose oxidase/kelch, beta-propellerunknownSSF50965Galactose oxidase, central domaincoord: 123..398
score: 2.8
IPR015915Kelch-type beta propellerGENE3DG3DSA:2.120.10.80coord: 222..341
score: 4.
IPR017451F-box associated interaction domainTIGRFAMsTIGR01640TIGR01640coord: 155..364
score: 9.7
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 61..95
score: 9.8
NoneNo IPR availablePANTHERPTHR31790FAMILY NOT NAMEDcoord: 32..418
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G001170Cucsa.108000Cucumber (Gy14) v1cgycmoB0247
CmoCh16G001170CmaCh16G001080Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G001170Cla006160Watermelon (97103) v1cmowmB310
CmoCh16G001170Csa3G183340Cucumber (Chinese Long) v2cmocuB317
CmoCh16G001170MELO3C006930Melon (DHL92) v3.5.1cmomeB289
CmoCh16G001170CSPI03G17140Wild cucumber (PI 183967)cmocpiB325
CmoCh16G001170Lsi05G012090Bottle gourd (USVL1VR-Ls)cmolsiB300
CmoCh16G001170Cp4.1LG14g06300Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G001170MELO3C006930.2Melon (DHL92) v3.6.1cmomedB331
CmoCh16G001170CsaV3_3G017340Cucumber (Chinese Long) v3cmocucB0379
CmoCh16G001170Cla97C05G090330Watermelon (97103) v2cmowmbB331
CmoCh16G001170Bhi01G000936Wax gourdcmowgoB0429
CmoCh16G001170CsGy3G017210Cucumber (Gy14) v2cgybcmoB312
CmoCh16G001170Carg15120Silver-seed gourdcarcmoB1326
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G001170Cucurbita moschata (Rifu)cmocmoB194
CmoCh16G001170Cucurbita moschata (Rifu)cmocmoB236
CmoCh16G001170Cucurbita moschata (Rifu)cmocmoB275
CmoCh16G001170Cucurbita moschata (Rifu)cmocmoB281
CmoCh16G001170Cucurbita moschata (Rifu)cmocmoB297
CmoCh16G001170Cucurbita maxima (Rimu)cmacmoB289
CmoCh16G001170Cucurbita maxima (Rimu)cmacmoB405
CmoCh16G001170Cucurbita maxima (Rimu)cmacmoB587
CmoCh16G001170Cucurbita maxima (Rimu)cmacmoB886
CmoCh16G001170Watermelon (Charleston Gray)cmowcgB290
CmoCh16G001170Cucurbita pepo (Zucchini)cmocpeB303
CmoCh16G001170Cucurbita pepo (Zucchini)cmocpeB322
CmoCh16G001170Bottle gourd (USVL1VR-Ls)cmolsiB308
CmoCh16G001170Silver-seed gourdcarcmoB0966
CmoCh16G001170Silver-seed gourdcarcmoB1002
CmoCh16G001170Cucumber (Chinese Long) v3cmocucB0394