CmoCh16G000310 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G000310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransposon Ty1-PL Gag-Pol polyprotein
LocationCmo_Chr16 : 142977 .. 149432 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAAAGTAAAGAAGAGAGTATGGGGTTGGGTCTGATTTTGAGCACCTGGGAGAAGAGGCAGCAGTTCCTTTGTTTATGCCTCTTTGTGTGTGTGTGTGTGTGTGTGTGGATGCAGAAATGTGGAGAGAGAATAAGATGAAGAAACACTCACAACTGGATTACTCCATCAACAAGTCTCGTCCCTCCCAGAGATTCTCTAAAACTTTTTACTCATCCTTCACGGATCGGATGATTACTTCAAACGACGCCGCATCATGACCCTCCAACCACCCAACTTTTCTATTTACCGTATCTTTACGAAGCTACATATGCCACTTTTATACCGCCCTTTAATTTATGCTTGCAATACACCAATTCTTTTATTTTTATTTTTCGAGAAAGGGAGAGGAAAAAGGGAAAAAGGACGCGCCGGACGGAAGCGACGGGCGGCGGTCGGAGATGGGATGAAGGAGGAGGTAGGAGAGAGAGAGAGAGAGAGAGAAAAAAAATAAATAATAATGGAGTAAATTTTCTTGTATTGAATTTTTAATAGAAAGAATGAGGTAAGTTGTTCTGATAAAAAAATTCAAACAGAAAGAGATAAATAATTTAGAAAAGGTATTAACCATTCATGTTATGGATTGAAGAGCAAAAATGGTATAAAGGCGTTAAAAGCATGCTCCATTTACCGCTCGATGAGGAGGGGGAGCAAGTAATAATGTGTTGTTAGAAGGTTTTTGAAGCATGCCAAAACTTTCATGATTGAATTATGAGGCATACCAAAAAAAATAAATAAAAATAGGTAACATAAAACAACACTATTAACAAACAAACTTGATTTCTTTTCGACCAAGAGTTTCCAAAATATATTGGTTTTACTTCAAGGGTAGCAAAGAACGAAGAATATCAACCCATCTGCCAAATCCAAATCCAAATCCATATCCCAATCGGGTTGACTCAAAACTTCTCAGCTTGGAAGCAAATCCAAGGGGACAAATGGGTTTGAAAGTTAGGCAGACCCCAACAAATATTCGGTGAAGGTAACACAGGCAAACGTATTGAAATTACTTTTTTTCCTTTACTGGGAATGAACCTTCAAAAGCTGATTCAAACACATTTACCAAGCAAACTTCACTTACACGTCTCCTCTTTTTTCCACCAACAATTTTTTACGAGTAGGGTAAGAATTGGGTTGTAATACACTTTGACTTGGGTGAGGTGCTCACTCGAGACTTTGTAGTCCACAAAGTCGGGCGCGGCGCTTTTTTGTTGTTTATTTGATCATTGAAAGAACAAAACAAAGAGGAAGGAAAGAAACTTGCTTAGAGTGCAAAGGAGAGACAGTGGAAGAAAATTTGTGGGCACAGGCAGACAACACAGTGTGCATTCCTCAGACCACAACAGTTAACGCAAGCAAAAGTGAAACATACTTTCTTTCTTCATTTATTCTTTCTCGTCTTCTTTTTCACGCAAACCAAACATAGTTTGAATTTGTTACACGGAGAGGAGGGAAATGACAAGACCATACTCATGTTTGTGTTACCAGACATGACAACAGATAGAACAACGAGGTTGCCTTTGTTAGATAAAACCTTTGTTTTTTCCTTATTTAGATTCACACGTTTACATTTAATTTCCTTTTGACCATTTGACAAACACGTCGAATGGATTAGCGAATTCTTAGACGTCAATTTTCTAGGAAGTGGCACAGATTCAGTTGGCCACTCTCCACCCATTTTTAGGATAGATTGTATTTAAATAGGAAATCTGTTTACCGGATTTAACATCCGGTTTTTGAAGAGCAGTCAAAACTTTTCAGTCCTTCTCTCTCTCTTATTTTACGCATTTTATCTCTCTTCCAACAACCTCCTGTCGACAATATCCTCTCGGTGTTTTCCCCAGCCGATTATTGAAATCCAACAATTGGTATCAGAGCCTCGTTGAAGCGATCGGTAGTATACCATCACAGAAGAGCCAACCTATCAACAATCAAGTTGAATAGCTCAAGTGGTTAGAGCGTCGACCTAATAACACACAGGTCTTAGGTTCGAGTAGAAGAAAATGCAAAGCACAAAAATAAATACATCGTGGGGCCCATCTCAAGCAGGCTCGCTCACTCCTCCACGCCGCCAAGTGCCGGCATCTCCATCACCACCACGAAGAGGCCGTGGCCGACATCGTGATGACAGGCGTCGAGTAGTTGTTGAGCGAGTGATCAGAGAGACAACGACCACCGTCGTTCAGTACCCGATGTTGACAAGGTCCAACTACAACGAGTGGGCCTTGTTGATGCGCGTTAACCTACAGGCGCAAGGGTTATGGCACGCTCTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCGCACGCTGTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCATATTACGATCTGTGCCCCCAGAGATGCTGGCTTCACTTTCCACCAAACGCACCGCACAATCGGCCTGGGAAGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCGGGAATCCAACATCGAGCAACTGCGAAAGGAGCTCTCGGAGATTCGCTTTAAGGACGGCGAATCCGTCGATGATTTTTCAATGCGGATCACGGGGCTCGCCAACAGCATCACCACCCTCGGTGGTGGCATTAGTGAGGCAGAAATCGTAAAGAAGATGTTGCAGGTCGTTCCCGATCACCTCGAGCAAGTCGCGATTTCAATCGAGACATTGCTTGATGTGAACGACCTAACAGTGGAAGAGGTGACCGGAAGACTACGTAACGTCGAGCAGCGGAAGAAGAATATCACTTCAGCTGTTGACAAGGAGGGCCGCCTACTCCTCACGGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGCGACAACACCGGCGAGAGCAACGGGTCCTCCTCCAGCCACAAAGGTGGTAAGAAGCCATGGATGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCAGGCCGATCCAATGCTCGAACTGTGGAAAGAGAGGACACCTGAGCAGAAATTGCTGGAGCAAGCTGAGAAATAAGGAGAAGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGACGAGCCAGCTCTCTTCATGGTAACTGCATGCGTCCCCAATTTCGATTCCAAATCCGACGACGATGTTGAACCCAAGAAAGAGCTCCAGTTGGGCGTAGCAAAGATGGCACCAGCTGGGGAGCCAATTCAACTGGAGGAGGAGCGAGTGTTCGCTCAGATCGGCGAAAGGGACGAGCAACACGAGCACCAGCAGTGGATCCTTGACACAGGGGCAACAAACCATATGACCGGGGCTAGATCTGCGTTCTCCGAACTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCGTCAGTAAGGGAGGCGAGCATCGCCAGCTGACCGACGTCTACTTCATCCCAAGGCTCAAGGCTAACCTTGTGAGCCTGGGTCAACTCGATGAGACAGGTTGCTTCATTTCCATCGAGCGCGGACTACTGAAAATCTGCGATAATCAATGACGCCTGCTCACGCAGGCAAGACGCACCACAAACCGTCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGACACTTAAACTTTCCTGCCCTAGAAAAGCTACAGAAGAAGGAGTTGGTGCACGGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCCCGAACAGCCTACCGAGCCGATGAGCCATTGGAGCTTGTACACGGCGATATTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACCCTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGTGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACTGACCGAGGCGGAGAATTCACCTCGGCAGGTTTCAGTAAGTACTGCGACGAGATCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCGCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACAGCTGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTCGACGGGAAGACGCCATATGAGGCCTGGTACAACAAAAAACCAACAGTACATCATTTTCGCGTGTTCGGCTGCATCGCATACATGAAGGTAACACGTCCCCATCACGCCAAGCTCGATCCCAGGGGGCTGAAGGTTGTCTTCATCGGCTACGAACCCGGGAGCAAGGCGTCCAGGCTCTATGATCCTGTAGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGACGAAAACACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACCGAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGCAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTGAAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACTAGCAGCGCGCGAGCTCGAGGAAGTGGCCGAACTACATGTCGTCAGTGCAGATGAACCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAAGAGATGACATCCATCACTGAGAACCAGACGTGGAGTCTGGAGGATATGCCACCGGGACACCAAGCCATAGGGCTCAAGTGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAAGGCTACGTCCAGAAGCAAGGAGTGGACTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCTTGCTAGCAATTGCAGCACATCACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCGACAAGCCCCACGAGCCTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGTCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGATGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGGAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATCCTACCAGGACGCCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGACACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCAGATCTTGCATATTCTGTTGGATATGTGAGCAGGTTTATGGAAGCACCTAGGGAGGAGCATCTAGTGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGGCTGGGGCGTAAGATACTGCGCTGGGAGCGGAAAGGAGAAACTCAAACTGGTCGGCTACAGCGATAGTGACATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCGGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACTCAAGGGATTTGGCTTGCACGACTAATGGAAGAACTCATCGGGAGAGAAAGCGATCCACCAATGCTATACGTAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAGATTGATTTCATTCGAACAGAGGAACAACTTGGAGACATTTTCACCAAGTCCCTGGCACGGGTGAAATTTGAAGAACTTCGCTCAAAGATCGGAGTTCAAATAATAAGGCAGATATAA

mRNA sequence

ATGGAAGAAGAAAGTAAAGAAGAGAGTATGGGGTTGGGTCTGATTTTGAGCACCTGGGAGAAGAGGCAGCAGTTCCTTTGTTTATGCCTCTTTGTGCGCAAGGGTTATGGCACGCTCTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCGCACGCTGTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCATATTACGATCTGTGCCCCCAGAGATGCTGGCTTCACTTTCCACCAAACGCACCGCACAATCGGCCTGGGAAGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCGGGAATCCAACATCGAGCAACTGCGAAAGGAGCTCTCGGAGATTCGCTTTAAGGACGGCGAATCCGTCGATGATTTTTCAATGCGGATCACGGGGCTCGCCAACAGCATCACCACCCTCGGTGGTGGCATTAGTGAGGCAGAAATCGTAAAGAAGATGTTGCAGGTCGTTCCCGATCACCTCGAGCAAGTCGCGATTTCAATCGAGACATTGCTTGATGTGAACGACCTAACAGTGGAAGAGGTGACCGGAAGACTACGTAACGTCGAGCAGCGGAAGAAGAATATCACTTCAGCTGTTGACAAGGAGGGCCGCCTACTCCTCACGGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGCGACAACACCGGCGAGAGCAACGGGTCCTCCTCCAGCCACAAAGGTGGTAAGAAGCCATGGATGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCAGGCCGATCCAATGCTCGAACTGTGGAAAGAGAGGACACCTGAGCAGAAATTGCTGGAGCAAGCTGAGAAATAAGGAGAAGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGACGAGCCAGCTCTCTTCATGGTAACTGCATGCGTCCCCAATTTCGATTCCAAATCCGACGACGATGTTGAACCCAAGAAAGAGCTCCAGTTGGGCGTAGCAAAGATGGCACCAGCTGGGGAGCCAATTCAACTGGAGGAGGAGCGAGTGTTCGCTCAGATCGGCGAAAGGGACGAGCAACACGAGCACCAGCAGTGGATCCTTGACACAGGGGCAACAAACCATATGACCGGGGCTAGATCTGCGTTCTCCGAACTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCGTCAGTAAGGGAGGCGAGCATCGCCAGCTGACCGACGTCTACTTCATCCCAAGGCTCAAGGCTAACCTTGCAAGACGCACCACAAACCGTCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGACACTTAAACTTTCCTGCCCTAGAAAAGCTACAGAAGAAGGAGTTGGTGCACGGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCCCGAACAGCCTACCGAGCCGATGAGCCATTGGAGCTTGTACACGGCGATATTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACCCTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGTGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACTGACCGAGGCGGAGAATTCACCTCGGCAGGTTTCAGTAAGTACTGCGACGAGATCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCGCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACAGCTGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTCGACGGGAAGACGCCATATGAGGCCTGGTACAACAAAAAACCAACAGTACATCATTTTCGCGTGTTCGGCTGCATCGCATACATGAAGGTAACACGTCCCCATCACGCCAAGCTCGATCCCAGGGGGCTGAAGGTTGTCTTCATCGGCTACGAACCCGGGAGCAAGGCGTCCAGGCTCTATGATCCTGTAGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGACGAAAACACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACCGAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGCAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTGAAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACTAGCAGCGCGCGAGCTCGAGGAAGTGGCCGAACTACATGTCGTCAGTGCAGATGAACCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAAGAGATGACATCCATCACTGAGAACCAGACGTGGAGTCTGGAGGATATGCCACCGGGACACCAAGCCATAGGGCTCAAGTGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAAGGCTACGTCCAGAAGCAAGGAGTGGACTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCTTGCTAGCAATTGCAGCACATCACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCGACAAGCCCCACGAGCCTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGTCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGATGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGGAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATCCTACCAGGACGCCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGACACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCAGATCTTGCATATTCTGTTGGATATGTGAGCAGGTTTATGGAAGCACCTAGGGAGGAGCATCTAGTGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGGCTGGGGCGTAAGATACTGCGCTGGGAGCGGAAAGGAGAAACTCAAACTGGTCGGCTACAGCGATAGTGACATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCGGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACTCAAGGGATTTGGCTTGCACGACTAATGGAAGAACTCATCGGGAGAGAAAGCGATCCACCAATGCTATACGTAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAGATTGATTTCATTCGAACAGAGGAACAACTTGGAGACATTTTCACCAAGTCCCTGGCACGGGTGAAATTTGAAGAACTTCGCTCAAAGATCGGAGTTCAAATAATAAGGCAGATATAA

Coding sequence (CDS)

ATGGAAGAAGAAAGTAAAGAAGAGAGTATGGGGTTGGGTCTGATTTTGAGCACCTGGGAGAAGAGGCAGCAGTTCCTTTGTTTATGCCTCTTTGTGCGCAAGGGTTATGGCACGCTCTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCGCACGCTGTCGAGCCAGAGGAAGGAGAAACAATCGAGTACCGGGAGGATCGGCTGGCGTTCGCCGCCATATTACGATCTGTGCCCCCAGAGATGCTGGCTTCACTTTCCACCAAACGCACCGCACAATCGGCCTGGGAAGGAATCAAATCCCGTCGGGTCGGTGTACAGCGAGTGCGGGAATCCAACATCGAGCAACTGCGAAAGGAGCTCTCGGAGATTCGCTTTAAGGACGGCGAATCCGTCGATGATTTTTCAATGCGGATCACGGGGCTCGCCAACAGCATCACCACCCTCGGTGGTGGCATTAGTGAGGCAGAAATCGTAAAGAAGATGTTGCAGGTCGTTCCCGATCACCTCGAGCAAGTCGCGATTTCAATCGAGACATTGCTTGATGTGAACGACCTAACAGTGGAAGAGGTGACCGGAAGACTACGTAACGTCGAGCAGCGGAAGAAGAATATCACTTCAGCTGTTGACAAGGAGGGCCGCCTACTCCTCACGGAGGAGGAATGGCTTGCACGCCTAAAGCTCCGCGACAACACCGGCGAGAGCAACGGGTCCTCCTCCAGCCACAAAGGTGGTAAGAAGCCATGGATGTCCCACGGGCGCACGCGCGGGAAAGATGGGAATCAAAAGAAGGAGTCGACCAATGGCAGGCCGATCCAATGCTCGAACTGTGGAAAGAGAGGACACCTGAGCAGAAATTGCTGGAGCAAGCTGAGAAATAAGGAGAAGGCCGAAAAGGCCCATGTGGCTCAATCCGAGGAGGACGAGCCAGCTCTCTTCATGGTAACTGCATGCGTCCCCAATTTCGATTCCAAATCCGACGACGATGTTGAACCCAAGAAAGAGCTCCAGTTGGGCGTAGCAAAGATGGCACCAGCTGGGGAGCCAATTCAACTGGAGGAGGAGCGAGTGTTCGCTCAGATCGGCGAAAGGGACGAGCAACACGAGCACCAGCAGTGGATCCTTGACACAGGGGCAACAAACCATATGACCGGGGCTAGATCTGCGTTCTCCGAACTCGACTCGGGGATCCGTGGGACGGTGAAATTCGGCGACGGCTCCGTCGTCGAGATCGAAGGGCGCGGCACCATCCTGTTCGTCAGTAAGGGAGGCGAGCATCGCCAGCTGACCGACGTCTACTTCATCCCAAGGCTCAAGGCTAACCTTGCAAGACGCACCACAAACCGTCTTTACATCCTGGAGTTAGAGATAGACCAACCCGTTAGCCTCTCGGCCAAGACCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGACACTTAAACTTTCCTGCCCTAGAAAAGCTACAGAAGAAGGAGTTGGTGCACGGCTTGCCAGAAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCGCACACCCTTTCCGTCCCGAACAGCCTACCGAGCCGATGAGCCATTGGAGCTTGTACACGGCGATATTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGGTAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACCCTGCTGCAAGCGAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGTGCGAGCGGAGGCCGAATGTGAGAAGAAGATGCGAGTGCTGCGCACTGACCGAGGCGGAGAATTCACCTCGGCAGGTTTCAGTAAGTACTGCGACGAGATCGGCATACAACGGCACCTAACGGCGCCCTACTCCCCCCAACAGAACGGAGTGGTAGAGCGCCGAAATCAGACCATTGTCGGGACAGCGAGGTCATTGTTGGTGACGGCCGGGATGCCTGGGAGATTCTGGGGAGAGGCAGTAATGACAGCTGTCTATCTCCTCAATCGGTCACCAACCCGAAGCCTCGACGGGAAGACGCCATATGAGGCCTGGTACAACAAAAAACCAACAGTACATCATTTTCGCGTGTTCGGCTGCATCGCATACATGAAGGTAACACGTCCCCATCACGCCAAGCTCGATCCCAGGGGGCTGAAGGTTGTCTTCATCGGCTACGAACCCGGGAGCAAGGCGTCCAGGCTCTATGATCCTGTAGGGGGGCGAGCTCACGTGTCTCGCGACGTCGTCTTCGACGAAAACACCTTCTGGCAGTGGAATGACGTGATCGAGGCAGACCGTAATCCAAATCAATTCACGGTGGAGTACCTCGTCACCGAGCCTGAAGAAGGAGGAGCCCAGCATCAGGAGACGTCACCGCCGCCAGCAGGTGCACCACCTGAACCAGTGGAATTCGCAACACCACGGACTGCGGATTCGACGCTGGATGCCGATCACGATACTGATCTGAAGGCTAGGTACCGGAGGATGGATGACCTAGTGGGAGGAGGTGAACCACCTGGACTAGCAGCGCGCGAGCTCGAGGAAGTGGCCGAACTACATGTCGTCAGTGCAGATGAACCAAACACCTTCGCCGAAGCAGAAAAGAACCCGTGCTGGCGGAAGGCAATGCAGGAAGAGATGACATCCATCACTGAGAACCAGACGTGGAGTCTGGAGGATATGCCACCGGGACACCAAGCCATAGGGCTCAAGTGGGTCTTCAAACTGAAGCGCAACGAAAAAGGAGAAGTTGTGAAGCACAAGGCTCGTCTGGTGGCGAAAGGCTACGTCCAGAAGCAAGGAGTGGACTTCGAAGAGGTATTTGCGCCAGTAGCAAGGTTAGAATCCGTTCGTTTCTTGCTAGCAATTGCAGCACATCACTCTTGGGAGGTTCACCATATGGACGTAAAGTCTGCTTTCCTTAACGGAGAGTTGAAGGAGACCGTCTATGTTCGACAACCACCTGGCTTCCTGGATAACGACAACCCTAATAAGGTACTGCGCCTGCACAAAGCACTCTACGGGCTTCGACAAGCCCCACGAGCCTGGAACGCGAAGCTCGACAGTACCCTACTGTCACTGAATTTCAAACGTTGTGTCTCTGAGCATGGCATGTACACGTACGGCCACGGCAAAAAGCGACTGATCGTGGGAGTGTACGTCGACGACCTCATAATCACTGGAGGCGACGTGGGAGTCCTCGGAAGGTTCAAGAAGGAGATGTCGAAAAACTTCGAGATGAGCGATCTCGATGTGCTCAGCTACTACCTCGGCATCGAAGTGCAACAGAACTCTTCCGGCATCTCCATCTGCCAAAGTGCATACGCGAGGAAGCTGCTGGACACAACTGGGCTTGTGGACAGTAATCCTACCAGGACGCCAATGGAGGCCCGACTTCAACTAAGGAAGGCCGACACTACGACGACAGTCGACTCCACCAATTACCGCAGCATTGTCGGGAGTCTGCGCTATCTGGTAAACTCTCGTCCAGATCTTGCATATTCTGTTGGATATGTGAGCAGGTTTATGGAAGCACCTAGGGAGGAGCATCTAGTGGCTGTCAAGCGCATCCTGCGCTATGTAGCCGGAACCAGAGGCTGGGGCGTAAGATACTGCGCTGGGAGCGGAAAGGAGAAACTCAAACTGGTCGGCTACAGCGATAGTGACATGGCCGGTGACGTTGATGATCGTAAGAGCACCAGCGGAATGATCTACTTTCTCTCAGGCGGCGCGATCTGCTGGCAATCAACAAAACAGAAGGTAGTTGCTTTGTCTTCCTGCGAAGCAGAATACATCGCCGCTTCGATGGCAGCAACTCAAGGGATTTGGCTTGCACGACTAATGGAAGAACTCATCGGGAGAGAAAGCGATCCACCAATGCTATACGTAGACAACAAAGCTACGATCTCCCTGATCAAAAATCCAGTTTTGCACGACCGGAGCAAGCACATAGAAATCAGATTCCACTACATTCGAGAATGTGCAGATCGAGGGCTCATCAAGATTGATTTCATTCGAACAGAGGAACAACTTGGAGACATTTTCACCAAGTCCCTGGCACGGGTGAAATTTGAAGAACTTCGCTCAAAGATCGGAGTTCAAATAATAAGGCAGATATAA
Homology
[Close]
BLAST of CmoCh16G000310 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 2.1e-178
Identity = 390/1054 (37.00%), Postives = 582/1054 (55.22%), Query Frame = 1 

Query: 380  QWILDTGATNHMTGARSAFSELDSGIRGTVKFGD---------GSVVEIEGRGTILFVSK 439
            +W++DT A++H T  R  F    +G  GTVK G+         G +      G  L V K
Sbjct: 293  EWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTL-VLK 352

Query: 440  GGEH---------------RQLTDVYFIPR----------LKANLARRTTNRLYILELEI 499
               H               R   + YF  +          +   +AR T   LY    EI
Sbjct: 353  DVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGT---LYRTNAEI 412

Query: 500  DQPVSLSAKTEEVSWR-WHARYGHLNFPALEKLQKKELVHGLPEIKGVN-KLCDGCLIGK 559
             Q   L+A  +E+S   WH R GH++   L+ L KK L+      KG   K CD CL GK
Sbjct: 413  CQG-ELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLIS---YAKGTTVKPCDYCLFGK 472

Query: 560  QRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFMWLTLLQAKS 619
            Q R  F + ++ R    L+LV+ D+CGP++  + GG   F+  +DD SR +W+ +L+ K 
Sbjct: 473  QHRVSFQT-SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKD 532

Query: 620  EAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGFSKYCDEIGIQRHLTAPYSPQQNG 679
            +  +  ++     E E  +K++ LR+D GGE+TS  F +YC   GI+   T P +PQ NG
Sbjct: 533  QVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNG 592

Query: 680  VVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKP 739
            V ER N+TIV   RS+L  A +P  FWGEAV TA YL+NRSP+  L  + P   W NK+ 
Sbjct: 593  VAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEV 652

Query: 740  TVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYEPGSKASRLYDPVGGRAHVSRDVV 799
            +  H +VFGC A+  V +    KLD + +  +FIGY       RL+DPV  +   SRDVV
Sbjct: 653  SYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVV 712

Query: 800  FDENTFWQWNDVIEADRN---PNQFTVEYLVTEPEEGGAQHQETSPPPAGAPPEPVEFAT 859
            F E+      D+ E  +N   PN  T+      P    +   E S    G  P  V    
Sbjct: 713  FRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVS--EQGEQPGEVIEQG 772

Query: 860  PRTADSTLDADHDTDLKARYRRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEA 919
             +  +   + +H T  + +++ +       E P + +R       + +    EP +  E 
Sbjct: 773  EQLDEGVEEVEHPTQGEEQHQPL----RRSERPRVESRRYPSTEYVLISDDREPESLKEV 832

Query: 920  ----EKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKA 979
                EKN    KAMQEEM S+ +N T+ L ++P G + +  KWVFKLK++   ++V++KA
Sbjct: 833  LSHPEKNQL-MKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKA 892

Query: 980  RLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETV 1039
            RLV KG+ QK+G+DF+E+F+PV ++ S+R +L++AA    EV  +DVK+AFL+G+L+E +
Sbjct: 893  RLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEI 952

Query: 1040 YVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYG 1099
            Y+ QP GF      + V +L+K+LYGL+QAPR W  K DS + S  + +  S+  +Y   
Sbjct: 953  YMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKR 1012

Query: 1100 HGKKR-LIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVLSYYLGIEV--QQNSS 1159
              +   +I+ +YVDD++I G D G++ + K ++SK+F+M DL      LG+++  ++ S 
Sbjct: 1013 FSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSR 1072

Query: 1160 GISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADTTTTVDSTN------YRSIVG 1219
             + + Q  Y  ++L+   + ++ P  TP+   L+L K    TTV+         Y S VG
Sbjct: 1073 KLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVG 1132

Query: 1220 SLRY-LVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSGKEK 1279
            SL Y +V +RPD+A++VG VSRF+E P +EH  AVK ILRY+ GT G  +  C G     
Sbjct: 1133 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL--CFGGSDPI 1192

Query: 1280 LKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAAT 1339
            LK  GY+D+DMAGD+D+RKS++G ++  SGGAI WQS  QK VALS+ EAEYIAA+    
Sbjct: 1193 LK--GYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGK 1252

Query: 1340 QGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGL 1381
            + IWL R ++EL G      ++Y D+++ I L KN + H R+KHI++R+H+IRE  D   
Sbjct: 1253 EMIWLKRFLQEL-GLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDES 1312

[Close]
BLAST of CmoCh16G000310 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 356.3 bits (913), Expect = 1.5e-96
Identity = 191/525 (36.38%), Postives = 301/525 (57.33%), Query Frame = 1 

Query: 863  VAELHVVSADEPNTFAEAE---KNPCWRKAMQEEMTSITENQTWSLEDMPPGHQAIGLKW 922
            V   H +  D PN+F E +       W +A+  E+ +   N TW++   P     +  +W
Sbjct: 880  VLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRW 939

Query: 923  VFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVH 982
            VF +K NE G  +++KARLVA+G+ QK  +D+EE FAPVAR+ S RF+L++   ++ +VH
Sbjct: 940  VFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVH 999

Query: 983  HMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLL 1042
             MDVK+AFLNG LKE +Y+R P G   + N + V +L+KA+YGL+QA R W    +  L 
Sbjct: 1000 QMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALK 1059

Query: 1043 SLNFKRCVSEHGMYTYGHG--KKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDL 1102
               F     +  +Y    G   + + V +YVDD++I  GD+  +  FK+ + + F M+DL
Sbjct: 1060 ECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDL 1119

Query: 1103 DVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADTTTTV 1162
            + + +++GI ++     I + QSAY +K+L    + + N   TP+ +++     ++    
Sbjct: 1120 NEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC 1179

Query: 1163 DSTNYRSIVGSLRY-LVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGV 1222
             +T  RS++G L Y ++ +RPDL  +V  +SR+      E    +KR+LRY+ GT    +
Sbjct: 1180 -NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKL 1239

Query: 1223 RYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIY-FLSGGAICWQSTKQKVVALSSCE 1282
             +      E  K++GY DSD AG   DRKST+G ++       ICW + +Q  VA SS E
Sbjct: 1240 IFKKNLAFEN-KIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE 1299

Query: 1283 AEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEIRF 1342
            AEY+A   A  + +WL  L+  +  +  +P  +Y DN+  IS+  NP  H R+KHI+I++
Sbjct: 1300 AEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKY 1359

Query: 1343 HYIRECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSKIGV 1381
            H+ RE     +I +++I TE QL DIFTK L   +F ELR K+G+
Sbjct: 1360 HFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]
BLAST of CmoCh16G000310 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-49
Identity = 113/305 (37.05%), Postives = 172/305 (56.39%), Query Frame = 1 

Query: 981  MDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLS 1040
            MDV +AFLN  + E +YV+QPPGF++  NP+ V  L+  +YGL+QAP  WN  +++TL  
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1041 LNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVL 1100
            + F R   EHG+Y        + + VYVDDL++      +  R K+E++K + M DL  +
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1101 SYYLGIEVQQNSSG-ISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADTTTTVDS 1160
              +LG+ + Q+S+G I++    Y  K    + +     T+TP+     L +  +    D 
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 1161 TNYRSIVGSLRYLVNS-RPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGVRY 1220
            T Y+SIVG L +  N+ RPD++Y V  +SRF+  PR  HL + +R+LRY+  TR   ++Y
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1221 CAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQK-VVALSSCEAE 1280
             +GS   +L L  Y D+      D   ST G +  L+G  + W S K K V+ + S EAE
Sbjct: 241  RSGS---QLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 300

Query: 1281 YIAAS 1283
            YI AS
Sbjct: 301  YITAS 302

[Close]
BLAST of CmoCh16G000310 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.1e-33
Identity = 81/225 (36.00%), Postives = 127/225 (56.44%), Query Frame = 1 

Query: 1066 VYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARK 1125
            +YVDD+++TG    +L     ++S  F M DL  + Y+LGI+++ + SG+ + Q+ YA +
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1126 LLDTTGLVDSNPTRTPMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGY 1185
            +L+  G++D  P  TP+  +L      T    D +++RSIVG+L+YL  +RPD++Y+V  
Sbjct: 65   ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 1186 VSRFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRK 1245
            V + M  P       +KR+LRYV GT   G+     S   KL +  + DSD AG    R+
Sbjct: 125  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS---KLNVQAFCDSDWAGCTSTRR 184

Query: 1246 STSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIW 1291
            ST+G   FL    I W + +Q  V+ SS E EY A ++ A +  W
Sbjct: 185  STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of CmoCh16G000310 vs. Swiss-Prot
Match: YL11B_YEAST (Transposon Ty1-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-LR1 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-24
Identity = 127/518 (24.52%), Postives = 242/518 (46.72%), Query Frame = 1 

Query: 888  KAMQEEMTSITENQTWSLE------DMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAK 947
            +A  +E+  + + +TW  +      ++ P  + I   ++F  KR        HKAR VA+
Sbjct: 1252 QAYHKEVNQLLKMKTWDTDRYYDRKEIDP-KRVINSMFIFNRKRGGT-----HKARFVAR 1311

Query: 948  GYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQP 1007
            G +Q        + +      ++   L++A+ +++ +  +D+ SA+L  ++KE +Y+R P
Sbjct: 1312 GDIQHPDTYDPGMQSNTVHHYALMTSLSLASDNNYYITQLDISSAYLYADIKEELYIRPP 1371

Query: 1008 PGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRC-VSEHGMYTYGHGKK 1067
            P    ND   K++RL K+LYGL+Q+   W   + S L+    K+C + E   ++      
Sbjct: 1372 PHLGMND---KLIRLKKSLYGLKQSGANWYETIKSYLI----KQCGMEEVRGWSCVFKNS 1431

Query: 1068 RLIVGVYVDDLIITGGDVG----VLGRFKKEMSK---NFEMSDLDVLSYYLGIEVQQNSS 1127
            ++ + ++VDD+I+   D+     ++   KK+      N   SD ++    LG+E++    
Sbjct: 1432 QVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRG 1491

Query: 1128 -----GISICQSAYARKL---LDTTGLVDSNPTRTPM---EARLQLRKADTTTTVDSTNY 1187
                 G+    +    KL   L+  G   S P +  +   +  L+L + D    V     
Sbjct: 1492 KYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVH--EM 1551

Query: 1188 RSIVGSLRYL-VNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWG-VRYCA 1247
            + ++G   Y+    R DL Y +  +++ +  P ++ L     +++++  TR    + + +
Sbjct: 1552 QKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKS 1611

Query: 1248 GSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIA 1307
               K   KLV  SD+   G+    KS  G IY L+G  I  +STK  +   S+ EAE  A
Sbjct: 1612 KPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHA 1671

Query: 1308 ASMAATQGIWLARLMEELIGRESDPPMLYVDNKATIS-LIKNPVLHDRSKHIEIRFHYIR 1367
             S +      L+ L++EL  ++     L  D+K+TIS +I N     R++    +   +R
Sbjct: 1672 ISESVPLLNNLSHLVQEL-NKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLR 1731

Query: 1368 ECADRGLIKIDFIRTEEQLGDIFTKSLARVKFEELRSK 1378
            +      + + +I T++ + D+ TK L    F+ L +K
Sbjct: 1732 DEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNK 1752

[Close]
BLAST of CmoCh16G000310 vs. TrEMBL
Match: Q7XPB1_ORYSJ (OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0026E15.10 PE=4 SV=2)

HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 809/1382 (58.54%), Postives = 1008/1382 (72.94%), Query Frame = 1 

Query: 61   AVEPEEGETIEYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRES 120
            AVEPE  + ++YR+D+ A AAILR+VP EMLA+L+ K TAQ AWE IK+RR+GVQRVRE+
Sbjct: 76   AVEPEGDDLVDYRQDQQALAAILRAVPAEMLATLAVKETAQEAWEAIKTRRIGVQRVREA 135

Query: 121  NIEQLRKELSEIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQ 180
            N +QLR+E  +I FKD E+VDDFSMRI GLAN++ TLG  I+EAE+V+K+LQVVP+HL+Q
Sbjct: 136  NAQQLRREFGDILFKDDETVDDFSMRIGGLANNLRTLGDNITEAEVVQKLLQVVPEHLQQ 195

Query: 181  VAISIETLLDVNDLTVEEVTGRLRNVEQRKKNITSA----VDKEGRLLLTEEEWLARLKL 240
            +AISIETLLDVN+L++EEVTGRLR+VEQRK+  T+A    VD  GRLL TEEEWLA+ + 
Sbjct: 196  IAISIETLLDVNELSLEEVTGRLRSVEQRKQCKTAAASSRVDANGRLLFTEEEWLAKFRK 255

Query: 241  RDNTGESNGSSSSHKGGKKPWMSHGRTRGK-------DGNQKKESTNGR-PIQCSNCGKR 300
              +  ++  SSS + G ++     GR RGK       +   K  +  GR P  C NCGKR
Sbjct: 256  AASLQDAAHSSSGN-GDRR-----GRGRGKKDDGAPKEAQPKPANPGGRNPGNCKNCGKR 315

Query: 301  GHLSRNCWSKLRNKEKAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGV 360
            GH +++C    R+K KA++A+VAQ E++EPAL +        D        P   +    
Sbjct: 316  GHWAKDC----RSKPKAQQAYVAQEEDEEPALLLAKV---QLDPPRPRVAAPTNVVSPPS 375

Query: 361  AKMAPA--GEPIQLEEERVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIR 420
            A  AP+  GE + + E +VFAQ+ +  E H+   WILDTGATNHMTG+RSAF+ELD+ + 
Sbjct: 376  APRAPSPIGE-LAVVEAKVFAQLDDGGE-HDPAMWILDTGATNHMTGSRSAFAELDTAVT 435

Query: 421  GTVKFGDGSVVEIEGRGTIL-----------------------FVSKGGEHRQLTDVYFI 480
            GTV+FGDGSVV IEGR T+L                        VS G   R  + V   
Sbjct: 436  GTVRFGDGSVVRIEGRVTVLFSCRFGEHRGIAGVYYIPRLTANIVSLGQLDRSGSKVLIH 495

Query: 481  PRL------KANL---ARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPAL 540
              +      + +L    RR+ + LY ++L+ID+PV L+A++ E +WRWHARYGHLNFPAL
Sbjct: 496  HGILHVWDPRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEPAWRWHARYGHLNFPAL 555

Query: 541  EKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKP 600
             KL ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRADE LELVHGD+CGPI+P
Sbjct: 556  RKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEP 615

Query: 601  ATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGE 660
            ATP G   FLLLVDD SR+MWLT++++K EAA A+K  + RAE E  +K+R LR DRG E
Sbjct: 616  ATPAGNRYFLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEVESGRKLRALRMDRGSE 675

Query: 661  FTSAGFSKYCDEIGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAV 720
            FTS  F +YC  +G+ R LTAPYSPQQNGVVERRNQTIV TARS++   G+PGRFWGEA+
Sbjct: 676  FTSIEFGEYCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAM 735

Query: 721  MTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKV 780
             TAV+LLNRSPT+SLD +TPYEAWY + P VH  R FGC+ ++K+T+P   KLD R   +
Sbjct: 736  STAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVKITKPGLKKLDDRSAPM 795

Query: 781  VFIGYEPGSKASRLYDPVGGRAHVSRDVVFDENTFWQWNDVIEADRNPN--QFTVEYLVT 840
            V +GYE GSKA RLYDPV  R HVSRDVVFDE+  W W  V   D  P    FTVE +VT
Sbjct: 796  VLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTP-DGAPQLEPFTVEQVVT 855

Query: 841  --------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLKA 900
                           P         T  PP+   PE VEF TP T DS LDAD D D+  
Sbjct: 856  TTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPTQDSILDADADDDVVP 915

Query: 901  RYRRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSIT 960
            RYR +D+L+G   PPG A R LE++ ELHVVSADEP + AEAE +P WR AMQ+E+ +I 
Sbjct: 916  RYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEADPSWRGAMQDELNAIV 975

Query: 961  ENQTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPV 1020
            +N TWSL D+P GH+AIGLKWV+KLKR+E+G +V++KARLVAKGYVQ+QGVDF+EVFA V
Sbjct: 976  DNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGYVQRQGVDFDEVFALV 1035

Query: 1021 ARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHK 1080
            ARLESVR LLA+AAH  W+VHHMDVKSAFLNGEL E VYV QPPGF+D+++ NKV RLHK
Sbjct: 1036 ARLESVRLLLAVAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPGFVDDNHKNKVYRLHK 1095

Query: 1081 ALYGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDV 1140
            ALYGLRQAPRAWNAKLDS+LLSL F R  SEHG+YT   G +RL+VGVYVDDLIITG   
Sbjct: 1096 ALYGLRQAPRAWNAKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLMVGVYVDDLIITGDHD 1155

Query: 1141 GVLGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPT 1200
              +  FK EM K F+MSDL  L YYLGIEV Q+S GI++ Q+AYA K+L+  GL D NP 
Sbjct: 1156 DEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYAGKILEKAGLKDCNPC 1215

Query: 1201 RTPMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHL 1260
            +TPME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+SVGYVSRFME+PRE+HL
Sbjct: 1216 QTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSVGYVSRFMESPREDHL 1275

Query: 1261 VAVKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGA 1320
             AV+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D+RKSTSG I+F++GG 
Sbjct: 1276 AAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDERKSTSGQIFFINGGP 1335

Query: 1321 ICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISL 1380
            + WQS+KQKVVALSSCEAEYIAA+ A  QG+WLARL+ E++G E   P+L VDN++TISL
Sbjct: 1336 VTWQSSKQKVVALSSCEAEYIAAAAATCQGVWLARLLAEVLGDEITAPLLKVDNQSTISL 1395

[Close]
BLAST of CmoCh16G000310 vs. TrEMBL
Match: A0B9X7_ORYSA (OSIGBa0135C09.3 protein OS=Oryza sativa GN=OSIGBa0135C09.3 PE=4 SV=1)

HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 795/1380 (57.61%), Postives = 989/1380 (71.67%), Query Frame = 1 

Query: 61   AVEPEEGETIEYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRES 120
            AVEPE  + ++YR+DR A AAILR+VP EMLA+L+ K TAQ AWE IK+RR+GVQRVRE+
Sbjct: 9    AVEPEGDDLVDYRQDRQALAAILRAVPAEMLATLAVKETAQEAWEAIKTRRIGVQRVREA 68

Query: 121  NIEQLRKELSEIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQ 180
            N +QLR+E  +I FKDGE+VD FSMRI GLAN++  LG  I+EAE+V+K+LQVVP+HL+Q
Sbjct: 69   NAQQLRREFGDILFKDGETVDHFSMRIGGLANNLRILGDNITEAEVVQKLLQVVPEHLQQ 128

Query: 181  VAISIETLLDVNDLTVEEVTGRLRNVEQRKKNITSA----VDKEGRLLLTEEEWLARLKL 240
            +AISIETLLDVN+L++EEVTG LR+VEQRK++ T+A    VD  GRLL TEEEWLA+ + 
Sbjct: 129  IAISIETLLDVNELSLEEVTGCLRSVEQRKQHKTAAASSRVDANGRLLFTEEEWLAKFRK 188

Query: 241  RDNTGESNGSSSSHKGGKKPWMSHGRTRGKDGNQKKESTN-----GR-PIQCSNCGKRGH 300
              +  ++  SS    GG       GR +  DG  K+  +      GR P  C NCGKRGH
Sbjct: 189  AASLQDAAHSS----GGNGDRQGRGRGKKDDGAPKEAQSKPANPGGRNPGNCKNCGKRGH 248

Query: 301  LSRNCWSKLRNKEKAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAK 360
             +++C    R+K KA++A+VAQ E++EPAL +        D        P   +    A 
Sbjct: 249  WAKDC----RSKPKAQQAYVAQEEDEEPALLLAKV---QLDPPRPRVAAPTNVVSPPSAP 308

Query: 361  MAPA--GEPIQLEEERVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGT 420
             AP+  GE + + E +VFAQ+ +  E H+   WILDTGATNHMTG+RSAF++LD+ + GT
Sbjct: 309  RAPSPMGE-LAVVEAKVFAQLDDGGE-HDPAMWILDTGATNHMTGSRSAFAKLDTAVTGT 368

Query: 421  VKFGDGSVVEIEGRGTILF-----------------------VSKGGEHRQLTDVYF--- 480
            V+FGDGSVV IEGRGT+LF                       VS G   R  + V     
Sbjct: 369  VRFGDGSVVRIEGRGTVLFSCRFGEHRGIAGVYYIPRLTANIVSLGQLDRSGSKVLIHHG 428

Query: 481  IPRL---KANL---ARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEK 540
            + R+   + +L    RR+ + LY ++L ID+PV L+A++ + +WRWHARYGHLNFP+L K
Sbjct: 429  VLRVWDPRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKPAWRWHARYGHLNFPSLRK 488

Query: 541  LQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPAT 600
            L ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRADE LELVHGD+CGPI+PAT
Sbjct: 489  LAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPAT 548

Query: 601  PGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFT 660
            P G   FLLLVDD SR+MWLTL+++K EAA A+K  +  AE E  +K+R LRTDRGGEFT
Sbjct: 549  PAGNRYFLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEVESGRKLRALRTDRGGEFT 608

Query: 661  SAGFSKYCDEIGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMT 720
            S  F +YC  + + R LTAPYSPQQNGVVERRNQTIV TARS++   G+PGRFWGEA+ T
Sbjct: 609  SIEFGEYCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAMST 668

Query: 721  AVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVF 780
            AV+LLNRSPT+SLD +TPYEAWY ++P VH  R FGC+ ++K+T+P   KLD R   +V 
Sbjct: 669  AVFLLNRSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVKITKPGLKKLDDRSAPMVL 728

Query: 781  IGYEPGSKASRLYDPVGGRAHVSRDVVFDENTFWQWNDVIEADRNPN--QFTVEYLVT-- 840
            +GYE GSKA RLYDPV  R HVSRDVVFDE+  W W   +  D  P    FTVE +VT  
Sbjct: 729  LGYEQGSKAYRLYDPVSERVHVSRDVVFDEDAAWDWGP-LTPDGAPQLEPFTVEQVVTTT 788

Query: 841  ------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLKARY 900
                         P         T  PP+   PE VEF TP T DS LDAD D D+  RY
Sbjct: 789  IGTAPASSLTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPTQDSILDADADDDVVPRY 848

Query: 901  RRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSITEN 960
              +D+L+G   PPG A R LE++ ELHVVSADEP + AEAE +P WR AMQ+E+ +I +N
Sbjct: 849  HLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEADPNWRGAMQDELNAIVDN 908

Query: 961  QTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVAR 1020
             TWSL D+P GH+AIGLKW                ARLVAKGYVQ+QGVDF+EVFAPVAR
Sbjct: 909  DTWSLTDLPHGHRAIGLKW----------------ARLVAKGYVQRQGVDFDEVFAPVAR 968

Query: 1021 LESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKAL 1080
            LE VR LLAIAAH  W+VHHMDVKSAFLNGEL E VYV QPPGF+D+++ NKV RLHKAL
Sbjct: 969  LELVRLLLAIAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPGFVDDNHKNKVYRLHKAL 1028

Query: 1081 YGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGV 1140
            YGLRQAPRAWN KLDS+LLSL F R  SEHG+YT   G +RL VGVYVDDLIITG     
Sbjct: 1029 YGLRQAPRAWNTKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLTVGVYVDDLIITGDHDDE 1088

Query: 1141 LGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRT 1200
            +  FK EM K F+MSDL  L YYLGIEV Q+S GI++ Q+AYA K+L+  GL D NP +T
Sbjct: 1089 IRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYAGKILEKAGLKDCNPCQT 1148

Query: 1201 PMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVA 1260
            PME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+SVGYVSRFME+PRE+HL A
Sbjct: 1149 PMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSVGYVSRFMESPREDHLAA 1208

Query: 1261 VKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAIC 1320
            V+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D+RKSTSG I+F++GG + 
Sbjct: 1209 VRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDERKSTSGQIFFINGGPVT 1268

Query: 1321 WQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIK 1380
            WQS+K+KVVALSSCEAEYIAA+    QG+WLARL+ E++G E   P+L VDN++TISLIK
Sbjct: 1269 WQSSKKKVVALSSCEAEYIAAAATTCQGVWLARLLAEVLGDEIAAPLLKVDNQSTISLIK 1328

[Close]
BLAST of CmoCh16G000310 vs. TrEMBL
Match: Q0J5Y3_ORYSJ (Os08g0389500 protein OS=Oryza sativa subsp. japonica GN=Os08g0389500 PE=4 SV=1)

HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 769/1393 (55.20%), Postives = 976/1393 (70.06%), Query Frame = 1 

Query: 60   HAVEPEEGETIEYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRE 119
            +AVEP   E +EYR+DRLA AAILRSVP EML +L  KR+A++AW+ IK+ RVGV+RVRE
Sbjct: 77   YAVEPYPDEEVEYRDDRLALAAILRSVPSEMLPTLRGKRSARAAWDAIKTIRVGVERVRE 136

Query: 120  SNIEQLRKELSEIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLE 179
            S  +QLR+E + + +K+GE+ +DFS+RITGLAN++ TLG  IS+A++V+KML VVP+HLE
Sbjct: 137  SKAQQLRREFAALTWKEGETAEDFSVRITGLANNLRTLGDNISDADVVRKMLDVVPEHLE 196

Query: 180  QVAISIETLLDVNDLTVEEVTGRLRNVEQRKKNITSAVDKEGRLLLTEEEWLARLKLRDN 239
            Q+A+++ETLLD+N ++VEEVTGRLR VEQR+      V+ +GRLLLT+EEW+A+LK    
Sbjct: 197  QIAVAVETLLDLNTVSVEEVTGRLRAVEQRRHRSAPVVNNQGRLLLTQEEWMAKLKNPGA 256

Query: 240  TGESNGSSSSHKGG-KKPWMSHGRTRGKDGNQKKESTNGRPIQ------CSNCGKRGHLS 299
            +GE    S S  GG K+   S    RGK G+++         Q      C  CGK+GH +
Sbjct: 257  SGEKGTPSGSGGGGNKRTGGSRRHDRGKGGSRQAAGPGDGSNQPKKTDKCRYCGKKGHWA 316

Query: 300  RNCWSKLRNKEKAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAKMA 359
            + C S+LR     ++AH+AQ EE+E  + MV     N  S S     P +   L      
Sbjct: 317  KECRSRLR-----DEAHLAQGEEEEEPMLMVATAQVNAISSSS----PPRFTSL------ 376

Query: 360  PAGEPIQLEEERVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGTVKFG 419
            PA E I L+E ++F Q+G  +   E  +WILDTGATNHMTG RSAFSEL++GIRGTVKFG
Sbjct: 377  PALEQIHLDESKLFVQLGG-EHGGEATRWILDTGATNHMTGTRSAFSELNTGIRGTVKFG 436

Query: 420  DGSVVEIEGRGTILFVSKGGEHRQLTDVYFIPRLKANLAR-------------------- 479
            DGSVV IEGRGT+LF  K GEH+ L  VY IPRL  N+                      
Sbjct: 437  DGSVVGIEGRGTVLFKCKDGEHQALEGVYHIPRLTTNIVSLGQLDEEKFKWSCEDGVLKI 496

Query: 480  ------------RTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKK 539
                        R+ NRLY+++L I +PV L+A+  +++WRWHAR+GHLNF ALEKL + 
Sbjct: 497  WNKQRRLLAKVVRSPNRLYVVKLNIGRPVCLAAQGGDIAWRWHARFGHLNFRALEKLGRA 556

Query: 540  ELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGK 599
             +V GLP I  V+++CD CL+GKQRR PFPS+  YRA E LELVHGDICGP+ PATP G 
Sbjct: 557  VMVRGLPLINHVDQVCDSCLVGKQRRLPFPSKAKYRAKEKLELVHGDICGPVTPATPSGN 616

Query: 600  SLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGF 659
             LFLLLVDD SR+MWL LL +K +A+ A+KR    AEAE  +K+R LRTDRGGEFT+  F
Sbjct: 617  KLFLLLVDDLSRYMWLILLSSKDQASVAIKRFLACAEAEAGRKLRTLRTDRGGEFTAHAF 676

Query: 660  SKYCDEIGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYL 719
            ++YC E GIQRHLTAPY+PQQNGVVERRNQT++G ARS++    +PG FWGEAV TAV+L
Sbjct: 677  AEYCAEHGIQRHLTAPYTPQQNGVVERRNQTVMGMARSMMKAKSLPGWFWGEAVNTAVFL 736

Query: 720  LNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYE 779
            LNR+PT+ +DGKTP+E W+  KP VH  R FGC+A++K      AKLD R + +VF+GYE
Sbjct: 737  LNRAPTQCVDGKTPFEVWHGVKPPVHFLRTFGCVAHVKNGGQRLAKLDDRSMPMVFVGYE 796

Query: 780  PGSKASRLYDPVGGRAHVSRDVVFDENTFWQWNDVIEA--DRNPNQFTVEYLVTEPE-EG 839
             G+KA R Y+PV  R HVSRD VF+E   W+W     A  D +   F VE+L T P  +G
Sbjct: 797  AGTKAYRFYNPVSRRVHVSRDAVFEEERSWEWGAEKGAGPDDDIEPFVVEHLATGPTGQG 856

Query: 840  G-------AQHQETSPP-----------------------PAGAPPEPVEFATPRTADST 899
            G       A  + TS P                       PA A    +EFA+P   D  
Sbjct: 857  GPVAATPTATQRSTSAPAPMAPPATPSQAGTPTHGAGPRTPASASSPAIEFASPPQGDLD 916

Query: 900  LDADHDTDLKARYRRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEAEKNPCWR 959
            LD DHD D+  R+R +D+L+G   PPGLA RE+ E   L V   DEP T  EA++   WR
Sbjct: 917  LDNDHDDDVPLRFRTVDNLLGASSPPGLAEREVTE--GLMVAIEDEPATAEEAKQVKEWR 976

Query: 960  KAMQEEMTSITENQTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQ 1019
            +AM EEM SI  N+TWSL ++P G +AIGLKWVFK+K++E G + KHKARLVAKGYVQ+Q
Sbjct: 977  EAMIEEMASIEHNKTWSLVELPAGQRAIGLKWVFKIKKDEHGNITKHKARLVAKGYVQRQ 1036

Query: 1020 GVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDN 1079
            G+D+EEVFAPVAR+ESVR LLA+AAH SW VHHMDVKSAFLNG+L E VYV+QPPGF+  
Sbjct: 1037 GIDYEEVFAPVARIESVRVLLAVAAHRSWSVHHMDVKSAFLNGDLAEEVYVQQPPGFVAA 1096

Query: 1080 DNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVY 1139
             +  KVL+LHKALYGL+QAPRAWN+KLDS+LL L F R   EHG+YT   G+KRL+VG+Y
Sbjct: 1097 GHERKVLKLHKALYGLKQAPRAWNSKLDSSLLMLGFARSECEHGLYTRSDGEKRLVVGIY 1156

Query: 1140 VDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARKLL 1199
            VDDLIITGG   V+  FK EM   F MSDL VLSYYLGIEV+Q   GI + Q+AYA+K+L
Sbjct: 1157 VDDLIITGGSTEVINTFKTEMKTLFRMSDLGVLSYYLGIEVRQGRRGIELLQAAYAKKIL 1216

Query: 1200 DTTGLVDSNPTRTPMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVS 1259
            +  G+   NP  TPMEARL+L K  T+  VD+T YRS++GSLRYL+N+RPD+A++VGY+S
Sbjct: 1217 EKAGMGTCNPCATPMEARLKLSKQSTSPAVDATEYRSLIGSLRYLMNTRPDMAFAVGYLS 1276

Query: 1260 RFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKST 1319
            RFME PR+EHL A+K +LRYVAGT  +G+ Y   SG  +  LVGYSDSDMAGD+DDRKST
Sbjct: 1277 RFMENPRQEHLAAMKHLLRYVAGTIDYGLVYT--SGDTEFNLVGYSDSDMAGDIDDRKST 1336

Query: 1320 SGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEELIGRESDPPM 1379
            SG+IYFL G  + WQS KQ+VVALSSCEAEYIA + AA QG+WL RL+++++G    PP 
Sbjct: 1337 SGIIYFLGGNPVAWQSQKQRVVALSSCEAEYIAGAAAACQGVWLRRLLQDVVGVSGPPPQ 1396

Query: 1380 LYVDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFTKSLA 1381
            L +DN++ I+L KNPVLHDRSKHI+ +FH++REC D G +++ F+ T+ QL DI TK+L 
Sbjct: 1397 LKMDNQSAIALSKNPVLHDRSKHIDTKFHFLRECVDSGAVRLAFVSTQAQLADIMTKALG 1449

[Close]
BLAST of CmoCh16G000310 vs. TrEMBL
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0034I13.10 PE=4 SV=1)

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 704/1367 (51.50%), Postives = 912/1367 (66.72%), Query Frame = 1 

Query: 71   EYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRESNIEQLRKELS 130
            E+REDR A +AIL++VP EML  L+   TA++AW+ IK+ RVGV RVRE+  +  R++  
Sbjct: 87   EFREDRAALSAILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFE 146

Query: 131  EIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQVAISIETLLD 190
             +RFK+ E+ ++F+MR+T +   I  +GG + +  + KK+L+VVP   + VAIS+E LLD
Sbjct: 147  SMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLD 206

Query: 191  VNDLTVEEVTGRLRNVEQRKKNITSAVDKEGRLLLTEEEWLARLKLRDNTGESNGSSSSH 250
            V  + +EE+ GRL  V+    +   +    G+L LTEE+W AR+K R+  G  N   S +
Sbjct: 207  VKTMALEELVGRLSTVDSYSDDEEGS--NGGKLYLTEEQWQARVKQREQEGSGN---SGN 266

Query: 251  KGGKKPWMSHGRTRGKDGNQKKESTNGRP-------IQCSNCGKRGHLSRNCWSKLRNKE 310
            KG   P   + R +     + KE+  G         ++C NC + GH +R C  K R + 
Sbjct: 267  KGRGAPGAQNHRGKPGGSPKGKEAATGANSSRDISRVKCFNCDEFGHYARQC-RKPRRQR 326

Query: 311  KAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAKMAPAGEPIQLEEE 370
            + E A++ Q+ E+EP L M               V    E  LG     P+G+ + L E+
Sbjct: 327  RGE-ANLVQAAEEEPTLLMAHVV----------GVSLAGEATLG---RTPSGQEVHLTEK 386

Query: 371  RVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGTVKFGDGSVVEIEGRG 430
            +V     +  E+     W LDTGATNHMTG RSAF+ELD+G+ GTVKFGDGSV+EI+GRG
Sbjct: 387  KVILDHEDGGEEEVTGDWFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRG 446

Query: 431  TILFVSKGGEHRQLTDVYFIPRLKANL--------------------------------A 490
            T++F  K G+HR L  VY+IP+L+ N+                                 
Sbjct: 447  TVVFRCKNGDHRSLDAVYYIPKLRKNIISVGRLDARGYDAHIWGGVCTLRDPNGLLLAKV 506

Query: 491  RRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKKELVHGLPEIKG 550
            +R  N LYIL+L I  PV ++A   + +WRWHAR+GHLNF +L +L +  +V GLP I  
Sbjct: 507  KRDINYLYILKLHIANPVCMAASGGDTAWRWHARFGHLNFQSLRRLAQGNMVRGLPTIDH 566

Query: 551  VNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKS 610
             ++LCDGCL GKQRR PFP    +RA E LELVHGD+CGPI PATPGG+  FLLLVDD S
Sbjct: 567  TDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMS 626

Query: 611  RFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGFSKYCDEIGIQR 670
            R MW+ LL  K EAA A+K+ +   E E  +K+R LRTDRGGEFTS  F  YC + G++R
Sbjct: 627  RHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRR 686

Query: 671  HLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDG 730
             LTAPYSPQQN VVERRNQT+V  ARS+L  AG+P RFWGEAV+ AVY+LNRSPT++LDG
Sbjct: 687  ELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDG 746

Query: 731  KTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYEPGSKASRLYDP 790
             TPYEAW+ ++P+V H RVFGC+ Y+K  +P+  KLD RG ++VFIGYE GSKA R+YDP
Sbjct: 747  VTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 806

Query: 791  VGGRAHVSRDVVFDENTFWQWNDVIEADRNPNQFTVEYLVT--EPEEGGAQHQETSPPPA 850
            V  R  VSRDVVFDE   W W D  +A     +FTV++ V+   P    A  Q  +P  A
Sbjct: 807  VAQRVCVSRDVVFDETATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADAGEQTGTPVQA 866

Query: 851  GAPPEPV------------EFATPRTADSTLDADHDTDLKARYRRMDDLVGGGEPPGLAA 910
            G  P               EF TP T+  T + D       RYRR+ D++   EP     
Sbjct: 867  GVSPVSTGVLSSPPRAPNGEFCTPPTS-VTPETDGG---PVRYRRVQDILSTTEP----- 926

Query: 911  RELE-EVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQAIG 970
              L+ + ++  +++ +EP +F EAEK+ CWR+AM EE+ S+ ENQTWSL ++P GH+AIG
Sbjct: 927  -VLDFDYSDQCLIATEEPTSFVEAEKHECWRRAMVEELRSVEENQTWSLAELPAGHKAIG 986

Query: 971  LKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSW 1030
            LKWV+KLK++  G +VKHKARLVAKGYVQ+QGVDF+EVFAPVAR+E+VR L+A+AA   W
Sbjct: 987  LKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGW 1046

Query: 1031 EVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDS 1090
            E+HHMDVKSAFLNGEL+E VYV QPPGF D  N +KVL+L KALYGLRQAPRAWNAKLD+
Sbjct: 1047 EIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQAPRAWNAKLDN 1106

Query: 1091 TLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSD 1150
            TLLSL F +  +E  +Y  G G  +LIVGVYVDDLIITG     +  FK +M + F MSD
Sbjct: 1107 TLLSLKFNKSATESAVYVRGVGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSD 1166

Query: 1151 LDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADTTTT 1210
            L  LSYYLG+EV Q   GI + QSAYA K+L+ TG+   NPT+ PMEARL+L K  T   
Sbjct: 1167 LGFLSYYLGMEVVQKGEGIFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGEC 1226

Query: 1211 VDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGV 1270
            VD T YRSIVGSLRYLVN+RPDLAYSVGYVSRFME P  EH  AVK ILRY++GT   G 
Sbjct: 1227 VDPTEYRSIVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYISGTIKTGC 1286

Query: 1271 RYCAGSGKEKL---KLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSS 1330
             Y    G+E++   KLVG+SDSDMAGD+DDRKST+G+++   G  I WQS KQKVVALSS
Sbjct: 1287 WY----GREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGSLISWQSQKQKVVALSS 1346

Query: 1331 CEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEI 1381
            CEAEYIAA+ AA QGIWL+RL+ EL+  E     L +DNK+ I+L KNPV HDRSKHI+ 
Sbjct: 1347 CEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCKNPVFHDRSKHIDT 1406

[Close]
BLAST of CmoCh16G000310 vs. TrEMBL
Match: Q8L4X0_ORYSJ (Os10g0130700 protein OS=Oryza sativa subsp. japonica GN=OSJNAb0072F04.11 PE=4 SV=1)

HSP 1 Score: 1317.8 bits (3409), Expect = 0.0e+00
Identity = 697/1372 (50.80%), Postives = 918/1372 (66.91%), Query Frame = 1 

Query: 71   EYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRESNIEQLRKELS 130
            E+REDR A +AIL++VP EML  L+   TA++AW+ IK+ RVGV RVRE+  +  R++  
Sbjct: 87   EFREDRAALSAILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEKGFRRQFE 146

Query: 131  EIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQVAISIETLLD 190
             +RFK+ E+ ++F+MR+T +   I  +GG + +  + KK+L+VVP   + VAIS+E LLD
Sbjct: 147  SMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLD 206

Query: 191  VNDLTVEEVTGRLRNVEQRKKNITSAVDKEGRLLLTEEEWLARLKLRDNTGESNGSSSSH 250
            V  + +EE+ GRL  V+    +   +    G+L LTEE+W AR+K R+  G  N   S +
Sbjct: 207  VKTMALEELVGRLSTVDSYSDDEEGS--DGGKLYLTEEQWQARVKQREQEGSGN---SGN 266

Query: 251  KGGKKPWMSHGRTRGKDGNQKKESTNGRP-------IQCSNCGKRGHLSRNCWSKLRNKE 310
            KG   P   + R +     + KE+  G         ++C NC + GH +R C  K R + 
Sbjct: 267  KGRGAPGTQNHRGKPGGSPKGKEAATGANSSRDISRVKCFNCDEFGHYARQC-RKPRRQR 326

Query: 311  KAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAKMAPAGEPIQLEEE 370
            + E A++ Q+ E+EP L M               V    E  LG     P G+ + L E+
Sbjct: 327  RGE-ANLVQAAEEEPTLLMAHVV----------GVSLAGEATLG---RTPGGQEVHLTEK 386

Query: 371  RVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGTVKFGDGSVVEIEGRG 430
            +V     +  E+   + W LDTGATNHMTG RSAF+ELD+G+ GTVKFGDGSV+EI+GRG
Sbjct: 387  KVILDHEDGGEEEVTRDWFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRG 446

Query: 431  TILFVSKGGEHRQLTDVYFIPRLKANL--------------------------------A 490
            T++F  K  +HR L  VY+IP+L+ N+                                 
Sbjct: 447  TVVFRCKNSDHRSLDTVYYIPKLRKNIISVGRLDARGYDAHIWGGVCTLRDPDGLLLAKV 506

Query: 491  RRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKKELVHGLPEIKG 550
            +R  N LYIL+L I  PV ++A   +++WRWHAR+GHLNF +L +L +  +V GLP I  
Sbjct: 507  KRDINYLYILKLHIANPVCMAASGGDMAWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDH 566

Query: 551  VNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKS 610
             ++LCDGCL GKQRR PFP    +RA E LELVHGD+CGPI PATPGG+  FLLLVDD S
Sbjct: 567  TDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMS 626

Query: 611  RFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGFSKYCDEIGIQR 670
            R MW+ LL  K EAA A+K+ +V  E E  +K+R LRTDRGGEFTS  F  YC + G++R
Sbjct: 627  RHMWIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRR 686

Query: 671  HLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDG 730
             LTAPYSPQQNGVVERRNQT+V  ARS+L  AGMP  FWGEAV+ AVY+LNRSPT++L+G
Sbjct: 687  ELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNG 746

Query: 731  KTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYEPGSKASRLYDP 790
             TP+EAW+ ++P+V H RVFGC+ Y+K  +P+  KLD RG ++VFIGYE GSKA R+YDP
Sbjct: 747  VTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 806

Query: 791  VGGRAHVSRDVVFDENTFWQWNDVIEADRNPNQFTVEYLV--------------TEPEEG 850
            V  R  VSRDVVFDE   W W D         +FTV++ V              + P +G
Sbjct: 807  VARRVCVSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPVQG 866

Query: 851  GAQHQETSPPPAGAPPE---PVEFATPRTADSTLDADHDTDLKARYRRMDDLVGGGEPPG 910
            G     T+ PP  +PPE    VEF +P   +S     ++  +  RYRR+ D++   EP  
Sbjct: 867  GTYPASTATPP--SPPEVPAGVEFCSP--PNSVTPGTNEGPI--RYRRVQDILSATEP-- 926

Query: 911  LAARELE-EVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQ 970
                 L+ + ++  +++++EP + AEAE+  CWR+AMQEE+ SI +NQTWS  ++P GH+
Sbjct: 927  ----VLDFDYSDQCLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHK 986

Query: 971  AIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAH 1030
            AIGLKWV+K+K++  G VVKHKARLVAKGYVQ+QG+DFEEVFAPVAR+E+VR L+A+AA+
Sbjct: 987  AIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAAN 1046

Query: 1031 HSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAK 1090
              WE+HHMDVKSAFLNG+L+E VYV QPPGF++     +VLRL KALYGL+QAPRAWNAK
Sbjct: 1047 KGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAK 1106

Query: 1091 LDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFE 1150
            L +TL+SLNF +  +E  +Y  G G  RLIVGVYVDDLII+G     +  FK+EM K F 
Sbjct: 1107 LHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLIISGAQASEIDFFKEEMKKKFR 1166

Query: 1151 MSDLDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADT 1210
            MSDL +LSYYLG+EV Q   G+ + Q+AYA K+L+ TG+   N T+ PMEARL+L++   
Sbjct: 1167 MSDLGLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESG 1226

Query: 1211 TTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRG 1270
               VDST YRS VGSLRYLVN+RPDLAYSVGYVSRFME P  EH  AVK ILRY+AGT  
Sbjct: 1227 GEGVDSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYIAGTLD 1286

Query: 1271 WGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSS 1330
             G  +     K +L+L+G+SDSDMAGD+DDRKST+G++Y L    I WQS KQKVVALSS
Sbjct: 1287 VGC-WFGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSS 1346

Query: 1331 CEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEI 1386
            CEAEYIAA+  A QGIWL RL+ EL+G +    ++ VDNK+ I+L KNPVLHDRSKHI+ 
Sbjct: 1347 CEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDT 1406

[Close]
BLAST of CmoCh16G000310 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-100
Identity = 198/507 (39.05%), Postives = 301/507 (59.37%), Query Frame = 1 

Query: 868  VVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQAIGLKWVFKLKRNE 927
            +  A EP+T+ EA++   W  AM +E+ ++    TW +  +PP  + IG KWV+K+K N 
Sbjct: 80   IAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 139

Query: 928  KGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAF 987
             G + ++KARLVAKGY Q++G+DF E F+PV +L SV+ +LAI+A +++ +H +D+ +AF
Sbjct: 140  DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199

Query: 988  LNGELKETVYVRQPPGFL----DNDNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNF 1047
            LNG+L E +Y++ PPG+     D+  PN V  L K++YGL+QA R W  K   TL+   F
Sbjct: 200  LNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGF 259

Query: 1048 KRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVLSYY 1107
             +  S+H  +        L V VYVDD+II   +   +   K ++   F++ DL  L Y+
Sbjct: 260  VQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYF 319

Query: 1108 LGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADTTTTVDSTNYR 1167
            LG+E+ ++++GI+ICQ  YA  LLD TGL+   P+  PM+  +          VD+  YR
Sbjct: 320  LGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR 379

Query: 1168 SIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSG 1227
             ++G L YL  +R D++++V  +S+F EAPR  H  AV +IL Y+ GT G G+ Y   S 
Sbjct: 380  RLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY---SS 439

Query: 1228 KEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASM 1287
            + +++L  +SD+      D R+ST+G   FL    I W+S KQ+VV+ SS EAEY A S 
Sbjct: 440  QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 499

Query: 1288 AATQGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEIRFHYIRE-CA 1347
            A  + +WLA+   EL    S P +L+ DN A I +  N V H+R+KHIE   H +RE   
Sbjct: 500  ATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSV 559

Query: 1348 DRGLIKIDFIRTEEQLGDIFTKSLARV 1370
             +  +   F   +EQ  D FT+ L+ +
Sbjct: 560  YQATLSYSFQAYDEQ--DGFTEYLSPI 581

[Close]
BLAST of CmoCh16G000310 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-35
Identity = 81/225 (36.00%), Postives = 127/225 (56.44%), Query Frame = 1 

Query: 1066 VYVDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARK 1125
            +YVDD+++TG    +L     ++S  F M DL  + Y+LGI+++ + SG+ + Q+ YA +
Sbjct: 5    LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 1126 LLDTTGLVDSNPTRTPMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGY 1185
            +L+  G++D  P  TP+  +L      T    D +++RSIVG+L+YL  +RPD++Y+V  
Sbjct: 65   ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 124

Query: 1186 VSRFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRK 1245
            V + M  P       +KR+LRYV GT   G+     S   KL +  + DSD AG    R+
Sbjct: 125  VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS---KLNVQAFCDSDWAGCTSTRR 184

Query: 1246 STSGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIW 1291
            ST+G   FL    I W + +Q  V+ SS E EY A ++ A +  W
Sbjct: 185  STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]
BLAST of CmoCh16G000310 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 87.4 bits (215), Expect = 7.4e-17
Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 1 

Query: 873 EPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVV 932
           EP +   A K+P W +AMQEE+ +++ N+TW L   P     +G KWVFK K +  G + 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 933 KHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIA 972
           + KARLVAKG+ Q++G+ F E ++PV R  ++R +L +A
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]
BLAST of CmoCh16G000310 vs. TAIR10
Match: ATMG00710.1 (ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.6e-11
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 1 

Query: 649 NQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHF 708
           N+TI+   RS+L   G+P  F  +A  TAV+++N+ P+ +++   P E W+   PT  + 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 709 RVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYEPGS 744
           R FGC+AY+        KL PR  K    G E GS
Sbjct: 62  RRFGCVAYIHC---DEGKLKPRAKK----GEEKGS 89

[Close]
BLAST of CmoCh16G000310 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.8e-08
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1 

Query: 1171 YLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSGKEKLKLV 1230
            YL  +RPDL ++V  +S+F  A R   + AV ++L YV GT G G+ Y A S    L+L 
Sbjct: 2    YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS---DLQLK 61

Query: 1231 GYSDSDMAGDVDDRKSTSG 1250
             ++DSD A   D R+S +G
Sbjct: 62   AFADSDWASCPDTRRSVTG 77

[Close]
BLAST of CmoCh16G000310 vs. NCBI nr
Match: gi|38344222|emb|CAE03692.2| (OSJNBb0026E15.10 [Oryza sativa Japonica Group])

HSP 1 Score: 1528.5 bits (3956), Expect = 0.0e+00
Identity = 809/1382 (58.54%), Postives = 1008/1382 (72.94%), Query Frame = 1 

Query: 61   AVEPEEGETIEYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRES 120
            AVEPE  + ++YR+D+ A AAILR+VP EMLA+L+ K TAQ AWE IK+RR+GVQRVRE+
Sbjct: 76   AVEPEGDDLVDYRQDQQALAAILRAVPAEMLATLAVKETAQEAWEAIKTRRIGVQRVREA 135

Query: 121  NIEQLRKELSEIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQ 180
            N +QLR+E  +I FKD E+VDDFSMRI GLAN++ TLG  I+EAE+V+K+LQVVP+HL+Q
Sbjct: 136  NAQQLRREFGDILFKDDETVDDFSMRIGGLANNLRTLGDNITEAEVVQKLLQVVPEHLQQ 195

Query: 181  VAISIETLLDVNDLTVEEVTGRLRNVEQRKKNITSA----VDKEGRLLLTEEEWLARLKL 240
            +AISIETLLDVN+L++EEVTGRLR+VEQRK+  T+A    VD  GRLL TEEEWLA+ + 
Sbjct: 196  IAISIETLLDVNELSLEEVTGRLRSVEQRKQCKTAAASSRVDANGRLLFTEEEWLAKFRK 255

Query: 241  RDNTGESNGSSSSHKGGKKPWMSHGRTRGK-------DGNQKKESTNGR-PIQCSNCGKR 300
              +  ++  SSS + G ++     GR RGK       +   K  +  GR P  C NCGKR
Sbjct: 256  AASLQDAAHSSSGN-GDRR-----GRGRGKKDDGAPKEAQPKPANPGGRNPGNCKNCGKR 315

Query: 301  GHLSRNCWSKLRNKEKAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGV 360
            GH +++C    R+K KA++A+VAQ E++EPAL +        D        P   +    
Sbjct: 316  GHWAKDC----RSKPKAQQAYVAQEEDEEPALLLAKV---QLDPPRPRVAAPTNVVSPPS 375

Query: 361  AKMAPA--GEPIQLEEERVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIR 420
            A  AP+  GE + + E +VFAQ+ +  E H+   WILDTGATNHMTG+RSAF+ELD+ + 
Sbjct: 376  APRAPSPIGE-LAVVEAKVFAQLDDGGE-HDPAMWILDTGATNHMTGSRSAFAELDTAVT 435

Query: 421  GTVKFGDGSVVEIEGRGTIL-----------------------FVSKGGEHRQLTDVYFI 480
            GTV+FGDGSVV IEGR T+L                        VS G   R  + V   
Sbjct: 436  GTVRFGDGSVVRIEGRVTVLFSCRFGEHRGIAGVYYIPRLTANIVSLGQLDRSGSKVLIH 495

Query: 481  PRL------KANL---ARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPAL 540
              +      + +L    RR+ + LY ++L+ID+PV L+A++ E +WRWHARYGHLNFPAL
Sbjct: 496  HGILHVWDPRGHLLVRVRRSDDCLYTIKLDIDRPVCLAARSAEPAWRWHARYGHLNFPAL 555

Query: 541  EKLQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKP 600
             KL ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRADE LELVHGD+CGPI+P
Sbjct: 556  RKLAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEP 615

Query: 601  ATPGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGE 660
            ATP G   FLLLVDD SR+MWLT++++K EAA A+K  + RAE E  +K+R LR DRG E
Sbjct: 616  ATPAGNRYFLLLVDDMSRYMWLTMIRSKDEAANAIKHFQARAEVESGRKLRALRMDRGSE 675

Query: 661  FTSAGFSKYCDEIGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAV 720
            FTS  F +YC  +G+ R LTAPYSPQQNGVVERRNQTIV TARS++   G+PGRFWGEA+
Sbjct: 676  FTSIEFGEYCANLGVGRQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAM 735

Query: 721  MTAVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKV 780
             TAV+LLNRSPT+SLD +TPYEAWY + P VH  R FGC+ ++K+T+P   KLD R   +
Sbjct: 736  STAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVKITKPGLKKLDDRSAPM 795

Query: 781  VFIGYEPGSKASRLYDPVGGRAHVSRDVVFDENTFWQWNDVIEADRNPN--QFTVEYLVT 840
            V +GYE GSKA RLYDPV  R HVSRDVVFDE+  W W  V   D  P    FTVE +VT
Sbjct: 796  VLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTP-DGAPQLEPFTVEQVVT 855

Query: 841  --------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLKA 900
                           P         T  PP+   PE VEF TP T DS LDAD D D+  
Sbjct: 856  TTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPTQDSILDADADDDVVP 915

Query: 901  RYRRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSIT 960
            RYR +D+L+G   PPG A R LE++ ELHVVSADEP + AEAE +P WR AMQ+E+ +I 
Sbjct: 916  RYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEADPSWRGAMQDELNAIV 975

Query: 961  ENQTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPV 1020
            +N TWSL D+P GH+AIGLKWV+KLKR+E+G +V++KARLVAKGYVQ+QGVDF+EVFA V
Sbjct: 976  DNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGYVQRQGVDFDEVFALV 1035

Query: 1021 ARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHK 1080
            ARLESVR LLA+AAH  W+VHHMDVKSAFLNGEL E VYV QPPGF+D+++ NKV RLHK
Sbjct: 1036 ARLESVRLLLAVAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPGFVDDNHKNKVYRLHK 1095

Query: 1081 ALYGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDV 1140
            ALYGLRQAPRAWNAKLDS+LLSL F R  SEHG+YT   G +RL+VGVYVDDLIITG   
Sbjct: 1096 ALYGLRQAPRAWNAKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLMVGVYVDDLIITGDHD 1155

Query: 1141 GVLGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPT 1200
              +  FK EM K F+MSDL  L YYLGIEV Q+S GI++ Q+AYA K+L+  GL D NP 
Sbjct: 1156 DEIRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYAGKILEKAGLKDCNPC 1215

Query: 1201 RTPMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHL 1260
            +TPME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+SVGYVSRFME+PRE+HL
Sbjct: 1216 QTPMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSVGYVSRFMESPREDHL 1275

Query: 1261 VAVKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGA 1320
             AV+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D+RKSTSG I+F++GG 
Sbjct: 1276 AAVRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDERKSTSGQIFFINGGP 1335

Query: 1321 ICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISL 1380
            + WQS+KQKVVALSSCEAEYIAA+ A  QG+WLARL+ E++G E   P+L VDN++TISL
Sbjct: 1336 VTWQSSKQKVVALSSCEAEYIAAAAATCQGVWLARLLAEVLGDEITAPLLKVDNQSTISL 1395

[Close]
BLAST of CmoCh16G000310 vs. NCBI nr
Match: gi|116634828|emb|CAH66352.1| (OSIGBa0135C09.3 [Oryza sativa Indica Group])

HSP 1 Score: 1492.6 bits (3863), Expect = 0.0e+00
Identity = 795/1380 (57.61%), Postives = 989/1380 (71.67%), Query Frame = 1 

Query: 61   AVEPEEGETIEYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRES 120
            AVEPE  + ++YR+DR A AAILR+VP EMLA+L+ K TAQ AWE IK+RR+GVQRVRE+
Sbjct: 9    AVEPEGDDLVDYRQDRQALAAILRAVPAEMLATLAVKETAQEAWEAIKTRRIGVQRVREA 68

Query: 121  NIEQLRKELSEIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQ 180
            N +QLR+E  +I FKDGE+VD FSMRI GLAN++  LG  I+EAE+V+K+LQVVP+HL+Q
Sbjct: 69   NAQQLRREFGDILFKDGETVDHFSMRIGGLANNLRILGDNITEAEVVQKLLQVVPEHLQQ 128

Query: 181  VAISIETLLDVNDLTVEEVTGRLRNVEQRKKNITSA----VDKEGRLLLTEEEWLARLKL 240
            +AISIETLLDVN+L++EEVTG LR+VEQRK++ T+A    VD  GRLL TEEEWLA+ + 
Sbjct: 129  IAISIETLLDVNELSLEEVTGCLRSVEQRKQHKTAAASSRVDANGRLLFTEEEWLAKFRK 188

Query: 241  RDNTGESNGSSSSHKGGKKPWMSHGRTRGKDGNQKKESTN-----GR-PIQCSNCGKRGH 300
              +  ++  SS    GG       GR +  DG  K+  +      GR P  C NCGKRGH
Sbjct: 189  AASLQDAAHSS----GGNGDRQGRGRGKKDDGAPKEAQSKPANPGGRNPGNCKNCGKRGH 248

Query: 301  LSRNCWSKLRNKEKAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAK 360
             +++C    R+K KA++A+VAQ E++EPAL +        D        P   +    A 
Sbjct: 249  WAKDC----RSKPKAQQAYVAQEEDEEPALLLAKV---QLDPPRPRVAAPTNVVSPPSAP 308

Query: 361  MAPA--GEPIQLEEERVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGT 420
             AP+  GE + + E +VFAQ+ +  E H+   WILDTGATNHMTG+RSAF++LD+ + GT
Sbjct: 309  RAPSPMGE-LAVVEAKVFAQLDDGGE-HDPAMWILDTGATNHMTGSRSAFAKLDTAVTGT 368

Query: 421  VKFGDGSVVEIEGRGTILF-----------------------VSKGGEHRQLTDVYF--- 480
            V+FGDGSVV IEGRGT+LF                       VS G   R  + V     
Sbjct: 369  VRFGDGSVVRIEGRGTVLFSCRFGEHRGIAGVYYIPRLTANIVSLGQLDRSGSKVLIHHG 428

Query: 481  IPRL---KANL---ARRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEK 540
            + R+   + +L    RR+ + LY ++L ID+PV L+A++ + +WRWHARYGHLNFP+L K
Sbjct: 429  VLRVWDPRGHLLVRVRRSDDCLYTIKLNIDRPVYLAARSAKPAWRWHARYGHLNFPSLRK 488

Query: 541  LQKKELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPAT 600
            L ++E+V GLP ++ V ++CDGCL+GKQRR  FP+++ YRADE LELVHGD+CGPI+PAT
Sbjct: 489  LAQQEMVRGLPLLQQVTQVCDGCLLGKQRRAAFPTQSKYRADEHLELVHGDLCGPIEPAT 548

Query: 601  PGGKSLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFT 660
            P G   FLLLVDD SR+MWLTL+++K EAA A+K  +  AE E  +K+R LRTDRGGEFT
Sbjct: 549  PAGNRYFLLLVDDMSRYMWLTLIRSKDEAANAIKHFQAHAEVESGRKLRALRTDRGGEFT 608

Query: 661  SAGFSKYCDEIGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMT 720
            S  F +YC  + + R LTAPYSPQQNGVVERRNQTIV TARS++   G+PGRFWGEA+ T
Sbjct: 609  SIEFGEYCANLRVGRQLTAPYSPQQNGVVERRNQTIVATARSMMKAKGVPGRFWGEAMST 668

Query: 721  AVYLLNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVF 780
            AV+LLNRSPT+SLD +TPYEAWY ++P VH  R FGC+ ++K+T+P   KLD R   +V 
Sbjct: 669  AVFLLNRSPTKSLDNQTPYEAWYGQRPAVHFLRTFGCVGHVKITKPGLKKLDDRSAPMVL 728

Query: 781  IGYEPGSKASRLYDPVGGRAHVSRDVVFDENTFWQWNDVIEADRNPN--QFTVEYLVT-- 840
            +GYE GSKA RLYDPV  R HVSRDVVFDE+  W W   +  D  P    FTVE +VT  
Sbjct: 729  LGYEQGSKAYRLYDPVSERVHVSRDVVFDEDAAWDWGP-LTPDGAPQLEPFTVEQVVTTT 788

Query: 841  ------------EPEEGGAQHQETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLKARY 900
                         P         T  PP+   PE VEF TP T DS LDAD D D+  RY
Sbjct: 789  IGTAPASSLTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPTQDSILDADADDDVVPRY 848

Query: 901  RRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSITEN 960
              +D+L+G   PPG A R LE++ ELHVVSADEP + AEAE +P WR AMQ+E+ +I +N
Sbjct: 849  HLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEADPNWRGAMQDELNAIVDN 908

Query: 961  QTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVAR 1020
             TWSL D+P GH+AIGLKW                ARLVAKGYVQ+QGVDF+EVFAPVAR
Sbjct: 909  DTWSLTDLPHGHRAIGLKW----------------ARLVAKGYVQRQGVDFDEVFAPVAR 968

Query: 1021 LESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKAL 1080
            LE VR LLAIAAH  W+VHHMDVKSAFLNGEL E VYV QPPGF+D+++ NKV RLHKAL
Sbjct: 969  LELVRLLLAIAAHQGWQVHHMDVKSAFLNGELLEEVYVSQPPGFVDDNHKNKVYRLHKAL 1028

Query: 1081 YGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGV 1140
            YGLRQAPRAWN KLDS+LLSL F R  SEHG+YT   G +RL VGVYVDDLIITG     
Sbjct: 1029 YGLRQAPRAWNTKLDSSLLSLGFHRSSSEHGVYTRTRGGRRLTVGVYVDDLIITGDHDDE 1088

Query: 1141 LGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRT 1200
            +  FK EM K F+MSDL  L YYLGIEV Q+S GI++ Q+AYA K+L+  GL D NP +T
Sbjct: 1089 IRSFKGEMMKLFKMSDLGALRYYLGIEVTQDSDGITLGQAAYAGKILEKAGLKDCNPCQT 1148

Query: 1201 PMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVA 1260
            PME RL+LRK      VD+T YRS+VGSLRYLVN+RPDLA+SVGYVSRFME+PRE+HL A
Sbjct: 1149 PMEVRLKLRKGSDFPLVDATLYRSLVGSLRYLVNTRPDLAFSVGYVSRFMESPREDHLAA 1208

Query: 1261 VKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAIC 1320
            V+RILRYVAGTR WG+R+  G+      LVGYSDSD+AGD D+RKSTSG I+F++GG + 
Sbjct: 1209 VRRILRYVAGTRCWGIRFGPGARCALPMLVGYSDSDLAGDPDERKSTSGQIFFINGGPVT 1268

Query: 1321 WQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIK 1380
            WQS+K+KVVALSSCEAEYIAA+    QG+WLARL+ E++G E   P+L VDN++TISLIK
Sbjct: 1269 WQSSKKKVVALSSCEAEYIAAAATTCQGVWLARLLAEVLGDEIAAPLLKVDNQSTISLIK 1328

[Close]
BLAST of CmoCh16G000310 vs. NCBI nr
Match: gi|113623687|dbj|BAF23632.1| (Os08g0389500 [Oryza sativa Japonica Group])

HSP 1 Score: 1475.3 bits (3818), Expect = 0.0e+00
Identity = 769/1393 (55.20%), Postives = 976/1393 (70.06%), Query Frame = 1 

Query: 60   HAVEPEEGETIEYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRE 119
            +AVEP   E +EYR+DRLA AAILRSVP EML +L  KR+A++AW+ IK+ RVGV+RVRE
Sbjct: 77   YAVEPYPDEEVEYRDDRLALAAILRSVPSEMLPTLRGKRSARAAWDAIKTIRVGVERVRE 136

Query: 120  SNIEQLRKELSEIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLE 179
            S  +QLR+E + + +K+GE+ +DFS+RITGLAN++ TLG  IS+A++V+KML VVP+HLE
Sbjct: 137  SKAQQLRREFAALTWKEGETAEDFSVRITGLANNLRTLGDNISDADVVRKMLDVVPEHLE 196

Query: 180  QVAISIETLLDVNDLTVEEVTGRLRNVEQRKKNITSAVDKEGRLLLTEEEWLARLKLRDN 239
            Q+A+++ETLLD+N ++VEEVTGRLR VEQR+      V+ +GRLLLT+EEW+A+LK    
Sbjct: 197  QIAVAVETLLDLNTVSVEEVTGRLRAVEQRRHRSAPVVNNQGRLLLTQEEWMAKLKNPGA 256

Query: 240  TGESNGSSSSHKGG-KKPWMSHGRTRGKDGNQKKESTNGRPIQ------CSNCGKRGHLS 299
            +GE    S S  GG K+   S    RGK G+++         Q      C  CGK+GH +
Sbjct: 257  SGEKGTPSGSGGGGNKRTGGSRRHDRGKGGSRQAAGPGDGSNQPKKTDKCRYCGKKGHWA 316

Query: 300  RNCWSKLRNKEKAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAKMA 359
            + C S+LR     ++AH+AQ EE+E  + MV     N  S S     P +   L      
Sbjct: 317  KECRSRLR-----DEAHLAQGEEEEEPMLMVATAQVNAISSSS----PPRFTSL------ 376

Query: 360  PAGEPIQLEEERVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGTVKFG 419
            PA E I L+E ++F Q+G  +   E  +WILDTGATNHMTG RSAFSEL++GIRGTVKFG
Sbjct: 377  PALEQIHLDESKLFVQLGG-EHGGEATRWILDTGATNHMTGTRSAFSELNTGIRGTVKFG 436

Query: 420  DGSVVEIEGRGTILFVSKGGEHRQLTDVYFIPRLKANLAR-------------------- 479
            DGSVV IEGRGT+LF  K GEH+ L  VY IPRL  N+                      
Sbjct: 437  DGSVVGIEGRGTVLFKCKDGEHQALEGVYHIPRLTTNIVSLGQLDEEKFKWSCEDGVLKI 496

Query: 480  ------------RTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKK 539
                        R+ NRLY+++L I +PV L+A+  +++WRWHAR+GHLNF ALEKL + 
Sbjct: 497  WNKQRRLLAKVVRSPNRLYVVKLNIGRPVCLAAQGGDIAWRWHARFGHLNFRALEKLGRA 556

Query: 540  ELVHGLPEIKGVNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGK 599
             +V GLP I  V+++CD CL+GKQRR PFPS+  YRA E LELVHGDICGP+ PATP G 
Sbjct: 557  VMVRGLPLINHVDQVCDSCLVGKQRRLPFPSKAKYRAKEKLELVHGDICGPVTPATPSGN 616

Query: 600  SLFLLLVDDKSRFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGF 659
             LFLLLVDD SR+MWL LL +K +A+ A+KR    AEAE  +K+R LRTDRGGEFT+  F
Sbjct: 617  KLFLLLVDDLSRYMWLILLSSKDQASVAIKRFLACAEAEAGRKLRTLRTDRGGEFTAHAF 676

Query: 660  SKYCDEIGIQRHLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYL 719
            ++YC E GIQRHLTAPY+PQQNGVVERRNQT++G ARS++    +PG FWGEAV TAV+L
Sbjct: 677  AEYCAEHGIQRHLTAPYTPQQNGVVERRNQTVMGMARSMMKAKSLPGWFWGEAVNTAVFL 736

Query: 720  LNRSPTRSLDGKTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYE 779
            LNR+PT+ +DGKTP+E W+  KP VH  R FGC+A++K      AKLD R + +VF+GYE
Sbjct: 737  LNRAPTQCVDGKTPFEVWHGVKPPVHFLRTFGCVAHVKNGGQRLAKLDDRSMPMVFVGYE 796

Query: 780  PGSKASRLYDPVGGRAHVSRDVVFDENTFWQWNDVIEA--DRNPNQFTVEYLVTEPE-EG 839
             G+KA R Y+PV  R HVSRD VF+E   W+W     A  D +   F VE+L T P  +G
Sbjct: 797  AGTKAYRFYNPVSRRVHVSRDAVFEEERSWEWGAEKGAGPDDDIEPFVVEHLATGPTGQG 856

Query: 840  G-------AQHQETSPP-----------------------PAGAPPEPVEFATPRTADST 899
            G       A  + TS P                       PA A    +EFA+P   D  
Sbjct: 857  GPVAATPTATQRSTSAPAPMAPPATPSQAGTPTHGAGPRTPASASSPAIEFASPPQGDLD 916

Query: 900  LDADHDTDLKARYRRMDDLVGGGEPPGLAARELEEVAELHVVSADEPNTFAEAEKNPCWR 959
            LD DHD D+  R+R +D+L+G   PPGLA RE+ E   L V   DEP T  EA++   WR
Sbjct: 917  LDNDHDDDVPLRFRTVDNLLGASSPPGLAEREVTE--GLMVAIEDEPATAEEAKQVKEWR 976

Query: 960  KAMQEEMTSITENQTWSLEDMPPGHQAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQ 1019
            +AM EEM SI  N+TWSL ++P G +AIGLKWVFK+K++E G + KHKARLVAKGYVQ+Q
Sbjct: 977  EAMIEEMASIEHNKTWSLVELPAGQRAIGLKWVFKIKKDEHGNITKHKARLVAKGYVQRQ 1036

Query: 1020 GVDFEEVFAPVARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDN 1079
            G+D+EEVFAPVAR+ESVR LLA+AAH SW VHHMDVKSAFLNG+L E VYV+QPPGF+  
Sbjct: 1037 GIDYEEVFAPVARIESVRVLLAVAAHRSWSVHHMDVKSAFLNGDLAEEVYVQQPPGFVAA 1096

Query: 1080 DNPNKVLRLHKALYGLRQAPRAWNAKLDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVY 1139
             +  KVL+LHKALYGL+QAPRAWN+KLDS+LL L F R   EHG+YT   G+KRL+VG+Y
Sbjct: 1097 GHERKVLKLHKALYGLKQAPRAWNSKLDSSLLMLGFARSECEHGLYTRSDGEKRLVVGIY 1156

Query: 1140 VDDLIITGGDVGVLGRFKKEMSKNFEMSDLDVLSYYLGIEVQQNSSGISICQSAYARKLL 1199
            VDDLIITGG   V+  FK EM   F MSDL VLSYYLGIEV+Q   GI + Q+AYA+K+L
Sbjct: 1157 VDDLIITGGSTEVINTFKTEMKTLFRMSDLGVLSYYLGIEVRQGRRGIELLQAAYAKKIL 1216

Query: 1200 DTTGLVDSNPTRTPMEARLQLRKADTTTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVS 1259
            +  G+   NP  TPMEARL+L K  T+  VD+T YRS++GSLRYL+N+RPD+A++VGY+S
Sbjct: 1217 EKAGMGTCNPCATPMEARLKLSKQSTSPAVDATEYRSLIGSLRYLMNTRPDMAFAVGYLS 1276

Query: 1260 RFMEAPREEHLVAVKRILRYVAGTRGWGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKST 1319
            RFME PR+EHL A+K +LRYVAGT  +G+ Y   SG  +  LVGYSDSDMAGD+DDRKST
Sbjct: 1277 RFMENPRQEHLAAMKHLLRYVAGTIDYGLVYT--SGDTEFNLVGYSDSDMAGDIDDRKST 1336

Query: 1320 SGMIYFLSGGAICWQSTKQKVVALSSCEAEYIAASMAATQGIWLARLMEELIGRESDPPM 1379
            SG+IYFL G  + WQS KQ+VVALSSCEAEYIA + AA QG+WL RL+++++G    PP 
Sbjct: 1337 SGIIYFLGGNPVAWQSQKQRVVALSSCEAEYIAGAAAACQGVWLRRLLQDVVGVSGPPPQ 1396

Query: 1380 LYVDNKATISLIKNPVLHDRSKHIEIRFHYIRECADRGLIKIDFIRTEEQLGDIFTKSLA 1381
            L +DN++ I+L KNPVLHDRSKHI+ +FH++REC D G +++ F+ T+ QL DI TK+L 
Sbjct: 1397 LKMDNQSAIALSKNPVLHDRSKHIDTKFHFLRECVDSGAVRLAFVSTQAQLADIMTKALG 1449

[Close]
BLAST of CmoCh16G000310 vs. NCBI nr
Match: gi|21741247|emb|CAD41731.1| (OSJNBb0034I13.10 [Oryza sativa Japonica Group])

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 704/1367 (51.50%), Postives = 912/1367 (66.72%), Query Frame = 1 

Query: 71   EYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRESNIEQLRKELS 130
            E+REDR A +AIL++VP EML  L+   TA++AW+ IK+ RVGV RVRE+  +  R++  
Sbjct: 87   EFREDRAALSAILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEQGFRRQFE 146

Query: 131  EIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQVAISIETLLD 190
             +RFK+ E+ ++F+MR+T +   I  +GG + +  + KK+L+VVP   + VAIS+E LLD
Sbjct: 147  SMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLD 206

Query: 191  VNDLTVEEVTGRLRNVEQRKKNITSAVDKEGRLLLTEEEWLARLKLRDNTGESNGSSSSH 250
            V  + +EE+ GRL  V+    +   +    G+L LTEE+W AR+K R+  G  N   S +
Sbjct: 207  VKTMALEELVGRLSTVDSYSDDEEGS--NGGKLYLTEEQWQARVKQREQEGSGN---SGN 266

Query: 251  KGGKKPWMSHGRTRGKDGNQKKESTNGRP-------IQCSNCGKRGHLSRNCWSKLRNKE 310
            KG   P   + R +     + KE+  G         ++C NC + GH +R C  K R + 
Sbjct: 267  KGRGAPGAQNHRGKPGGSPKGKEAATGANSSRDISRVKCFNCDEFGHYARQC-RKPRRQR 326

Query: 311  KAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAKMAPAGEPIQLEEE 370
            + E A++ Q+ E+EP L M               V    E  LG     P+G+ + L E+
Sbjct: 327  RGE-ANLVQAAEEEPTLLMAHVV----------GVSLAGEATLG---RTPSGQEVHLTEK 386

Query: 371  RVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGTVKFGDGSVVEIEGRG 430
            +V     +  E+     W LDTGATNHMTG RSAF+ELD+G+ GTVKFGDGSV+EI+GRG
Sbjct: 387  KVILDHEDGGEEEVTGDWFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRG 446

Query: 431  TILFVSKGGEHRQLTDVYFIPRLKANL--------------------------------A 490
            T++F  K G+HR L  VY+IP+L+ N+                                 
Sbjct: 447  TVVFRCKNGDHRSLDAVYYIPKLRKNIISVGRLDARGYDAHIWGGVCTLRDPNGLLLAKV 506

Query: 491  RRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKKELVHGLPEIKG 550
            +R  N LYIL+L I  PV ++A   + +WRWHAR+GHLNF +L +L +  +V GLP I  
Sbjct: 507  KRDINYLYILKLHIANPVCMAASGGDTAWRWHARFGHLNFQSLRRLAQGNMVRGLPTIDH 566

Query: 551  VNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKS 610
             ++LCDGCL GKQRR PFP    +RA E LELVHGD+CGPI PATPGG+  FLLLVDD S
Sbjct: 567  TDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMS 626

Query: 611  RFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGFSKYCDEIGIQR 670
            R MW+ LL  K EAA A+K+ +   E E  +K+R LRTDRGGEFTS  F  YC + G++R
Sbjct: 627  RHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRR 686

Query: 671  HLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDG 730
             LTAPYSPQQN VVERRNQT+V  ARS+L  AG+P RFWGEAV+ AVY+LNRSPT++LDG
Sbjct: 687  ELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDG 746

Query: 731  KTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYEPGSKASRLYDP 790
             TPYEAW+ ++P+V H RVFGC+ Y+K  +P+  KLD RG ++VFIGYE GSKA R+YDP
Sbjct: 747  VTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 806

Query: 791  VGGRAHVSRDVVFDENTFWQWNDVIEADRNPNQFTVEYLVT--EPEEGGAQHQETSPPPA 850
            V  R  VSRDVVFDE   W W D  +A     +FTV++ V+   P    A  Q  +P  A
Sbjct: 807  VAQRVCVSRDVVFDETATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADAGEQTGTPVQA 866

Query: 851  GAPPEPV------------EFATPRTADSTLDADHDTDLKARYRRMDDLVGGGEPPGLAA 910
            G  P               EF TP T+  T + D       RYRR+ D++   EP     
Sbjct: 867  GVSPVSTGVLSSPPRAPNGEFCTPPTS-VTPETDGG---PVRYRRVQDILSTTEP----- 926

Query: 911  RELE-EVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQAIG 970
              L+ + ++  +++ +EP +F EAEK+ CWR+AM EE+ S+ ENQTWSL ++P GH+AIG
Sbjct: 927  -VLDFDYSDQCLIATEEPTSFVEAEKHECWRRAMVEELRSVEENQTWSLAELPAGHKAIG 986

Query: 971  LKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAHHSW 1030
            LKWV+KLK++  G +VKHKARLVAKGYVQ+QGVDF+EVFAPVAR+E+VR L+A+AA   W
Sbjct: 987  LKWVYKLKKDPSGAIVKHKARLVAKGYVQQQGVDFDEVFAPVARMETVRLLVALAAQKGW 1046

Query: 1031 EVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAKLDS 1090
            E+HHMDVKSAFLNGEL+E VYV QPPGF D  N +KVL+L KALYGLRQAPRAWNAKLD+
Sbjct: 1047 EIHHMDVKSAFLNGELEEEVYVVQPPGFDDKTNASKVLKLRKALYGLRQAPRAWNAKLDN 1106

Query: 1091 TLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFEMSD 1150
            TLLSL F +  +E  +Y  G G  +LIVGVYVDDLIITG     +  FK +M + F MSD
Sbjct: 1107 TLLSLKFNKSATESAVYVRGVGDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSD 1166

Query: 1151 LDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADTTTT 1210
            L  LSYYLG+EV Q   GI + QSAYA K+L+ TG+   NPT+ PMEARL+L K  T   
Sbjct: 1167 LGFLSYYLGMEVVQKGEGIFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGEC 1226

Query: 1211 VDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRGWGV 1270
            VD T YRSIVGSLRYLVN+RPDLAYSVGYVSRFME P  EH  AVK ILRY++GT   G 
Sbjct: 1227 VDPTEYRSIVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYISGTIKTGC 1286

Query: 1271 RYCAGSGKEKL---KLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSS 1330
             Y    G+E++   KLVG+SDSDMAGD+DDRKST+G+++   G  I WQS KQKVVALSS
Sbjct: 1287 WY----GREEVGNAKLVGFSDSDMAGDLDDRKSTTGVLFRYGGSLISWQSQKQKVVALSS 1346

Query: 1331 CEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEI 1381
            CEAEYIAA+ AA QGIWL+RL+ EL+  E     L +DNK+ I+L KNPV HDRSKHI+ 
Sbjct: 1347 CEAEYIAATTAACQGIWLSRLIAELLDAEPGQTTLMIDNKSAINLCKNPVFHDRSKHIDT 1406

[Close]
BLAST of CmoCh16G000310 vs. NCBI nr
Match: gi|20514806|gb|AAM23251.1|AC092553_17 (Putative pol polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 1317.8 bits (3409), Expect = 0.0e+00
Identity = 697/1372 (50.80%), Postives = 918/1372 (66.91%), Query Frame = 1 

Query: 71   EYREDRLAFAAILRSVPPEMLASLSTKRTAQSAWEGIKSRRVGVQRVRESNIEQLRKELS 130
            E+REDR A +AIL++VP EML  L+   TA++AW+ IK+ RVGV RVRE+  +  R++  
Sbjct: 87   EFREDRAALSAILQAVPREMLRGLAKHDTAKAAWDAIKTMRVGVDRVREAKEKGFRRQFE 146

Query: 131  EIRFKDGESVDDFSMRITGLANSITTLGGGISEAEIVKKMLQVVPDHLEQVAISIETLLD 190
             +RFK+ E+ ++F+MR+T +   I  +GG + +  + KK+L+VVP   + VAIS+E LLD
Sbjct: 147  SMRFKERETPEEFAMRLTAVVADIRDMGGVMEDEHVNKKLLRVVPKKYKPVAISLEQLLD 206

Query: 191  VNDLTVEEVTGRLRNVEQRKKNITSAVDKEGRLLLTEEEWLARLKLRDNTGESNGSSSSH 250
            V  + +EE+ GRL  V+    +   +    G+L LTEE+W AR+K R+  G  N   S +
Sbjct: 207  VKTMALEELVGRLSTVDSYSDDEEGS--DGGKLYLTEEQWQARVKQREQEGSGN---SGN 266

Query: 251  KGGKKPWMSHGRTRGKDGNQKKESTNGRP-------IQCSNCGKRGHLSRNCWSKLRNKE 310
            KG   P   + R +     + KE+  G         ++C NC + GH +R C  K R + 
Sbjct: 267  KGRGAPGTQNHRGKPGGSPKGKEAATGANSSRDISRVKCFNCDEFGHYARQC-RKPRRQR 326

Query: 311  KAEKAHVAQSEEDEPALFMVTACVPNFDSKSDDDVEPKKELQLGVAKMAPAGEPIQLEEE 370
            + E A++ Q+ E+EP L M               V    E  LG     P G+ + L E+
Sbjct: 327  RGE-ANLVQAAEEEPTLLMAHVV----------GVSLAGEATLG---RTPGGQEVHLTEK 386

Query: 371  RVFAQIGERDEQHEHQQWILDTGATNHMTGARSAFSELDSGIRGTVKFGDGSVVEIEGRG 430
            +V     +  E+   + W LDTGATNHMTG RSAF+ELD+G+ GTVKFGDGSV+EI+GRG
Sbjct: 387  KVILDHEDGGEEEVTRDWFLDTGATNHMTGVRSAFAELDTGVVGTVKFGDGSVIEIQGRG 446

Query: 431  TILFVSKGGEHRQLTDVYFIPRLKANL--------------------------------A 490
            T++F  K  +HR L  VY+IP+L+ N+                                 
Sbjct: 447  TVVFRCKNSDHRSLDTVYYIPKLRKNIISVGRLDARGYDAHIWGGVCTLRDPDGLLLAKV 506

Query: 491  RRTTNRLYILELEIDQPVSLSAKTEEVSWRWHARYGHLNFPALEKLQKKELVHGLPEIKG 550
            +R  N LYIL+L I  PV ++A   +++WRWHAR+GHLNF +L +L +  +V GLP I  
Sbjct: 507  KRDINYLYILKLHIANPVCMAASGGDMAWRWHARFGHLNFQSLRRLAQGNMVRGLPIIDH 566

Query: 551  VNKLCDGCLIGKQRRTPFPSRTAYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKS 610
             ++LCDGCL GKQRR PFP    +RA E LELVHGD+CGPI PATPGG+  FLLLVDD S
Sbjct: 567  TDQLCDGCLAGKQRRLPFPEEAKFRAQEALELVHGDLCGPITPATPGGRKYFLLLVDDMS 626

Query: 611  RFMWLTLLQAKSEAAEAVKRIKVRAEAECEKKMRVLRTDRGGEFTSAGFSKYCDEIGIQR 670
            R MW+ LL  K EAA A+K+ +V  E E  +K+R LRTDRGGEFTS  F  YC + G++R
Sbjct: 627  RHMWIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRR 686

Query: 671  HLTAPYSPQQNGVVERRNQTIVGTARSLLVTAGMPGRFWGEAVMTAVYLLNRSPTRSLDG 730
             LTAPYSPQQNGVVERRNQT+V  ARS+L  AGMP  FWGEAV+ AVY+LNRSPT++L+G
Sbjct: 687  ELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNG 746

Query: 731  KTPYEAWYNKKPTVHHFRVFGCIAYMKVTRPHHAKLDPRGLKVVFIGYEPGSKASRLYDP 790
             TP+EAW+ ++P+V H RVFGC+ Y+K  +P+  KLD RG ++VFIGYE GSKA R+YDP
Sbjct: 747  VTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDP 806

Query: 791  VGGRAHVSRDVVFDENTFWQWNDVIEADRNPNQFTVEYLV--------------TEPEEG 850
            V  R  VSRDVVFDE   W W D         +FTV++ V              + P +G
Sbjct: 807  VARRVCVSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPVQG 866

Query: 851  GAQHQETSPPPAGAPPE---PVEFATPRTADSTLDADHDTDLKARYRRMDDLVGGGEPPG 910
            G     T+ PP  +PPE    VEF +P   +S     ++  +  RYRR+ D++   EP  
Sbjct: 867  GTYPASTATPP--SPPEVPAGVEFCSP--PNSVTPGTNEGPI--RYRRVQDILSATEP-- 926

Query: 911  LAARELE-EVAELHVVSADEPNTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHQ 970
                 L+ + ++  +++++EP + AEAE+  CWR+AMQEE+ SI +NQTWS  ++P GH+
Sbjct: 927  ----VLDFDYSDQCLLASEEPMSLAEAEQQLCWRQAMQEELKSIEDNQTWSFAELPVGHK 986

Query: 971  AIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAIAAH 1030
            AIGLKWV+K+K++  G VVKHKARLVAKGYVQ+QG+DFEEVFAPVAR+E+VR L+A+AA+
Sbjct: 987  AIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQGIDFEEVFAPVARMETVRLLIAVAAN 1046

Query: 1031 HSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALYGLRQAPRAWNAK 1090
              WE+HHMDVKSAFLNG+L+E VYV QPPGF++     +VLRL KALYGL+QAPRAWNAK
Sbjct: 1047 KGWEIHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKALYGLKQAPRAWNAK 1106

Query: 1091 LDSTLLSLNFKRCVSEHGMYTYGHGKKRLIVGVYVDDLIITGGDVGVLGRFKKEMSKNFE 1150
            L +TL+SLNF +  +E  +Y  G G  RLIVGVYVDDLII+G     +  FK+EM K F 
Sbjct: 1107 LHNTLISLNFIKSETESAVYVRGTGSSRLIVGVYVDDLIISGAQASEIDFFKEEMKKKFR 1166

Query: 1151 MSDLDVLSYYLGIEVQQNSSGISICQSAYARKLLDTTGLVDSNPTRTPMEARLQLRKADT 1210
            MSDL +LSYYLG+EV Q   G+ + Q+AYA K+L+ TG+   N T+ PMEARL+L++   
Sbjct: 1167 MSDLGLLSYYLGMEVVQKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESG 1226

Query: 1211 TTTVDSTNYRSIVGSLRYLVNSRPDLAYSVGYVSRFMEAPREEHLVAVKRILRYVAGTRG 1270
               VDST YRS VGSLRYLVN+RPDLAYSVGYVSRFME P  EH  AVK ILRY+AGT  
Sbjct: 1227 GEGVDSTMYRSTVGSLRYLVNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHILRYIAGTLD 1286

Query: 1271 WGVRYCAGSGKEKLKLVGYSDSDMAGDVDDRKSTSGMIYFLSGGAICWQSTKQKVVALSS 1330
             G  +     K +L+L+G+SDSDMAGD+DDRKST+G++Y L    I WQS KQKVVALSS
Sbjct: 1287 VGC-WFGRREKGELRLIGFSDSDMAGDLDDRKSTTGVLYMLGDSLISWQSQKQKVVALSS 1346

Query: 1331 CEAEYIAASMAATQGIWLARLMEELIGRESDPPMLYVDNKATISLIKNPVLHDRSKHIEI 1386
            CEAEYIAA+  A QGIWL RL+ EL+G +    ++ VDNK+ I+L KNPVLHDRSKHI+ 
Sbjct: 1347 CEAEYIAATTGACQGIWLNRLLAELLGEDPGQTVMKVDNKSAINLCKNPVLHDRSKHIDT 1406

The following BLAST results are available for this feature:
BLAST of CmoCh16G000310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC2.1e-17837.00Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME1.5e-9636.38Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
YCH4_YEAST1.1e-4937.05Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
M810_ARATH1.1e-3336.00Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
YL11B_YEAST4.5e-2424.52Transposon Ty1-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of CmoCh16G000310 vs. TrEMBL
Match NameE-valueIdentityDescription
Q7XPB1_ORYSJ0.0e+0058.54OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0026E15.10 PE=... [more]
A0B9X7_ORYSA0.0e+0057.61OSIGBa0135C09.3 protein OS=Oryza sativa GN=OSIGBa0135C09.3 PE=4 SV=1[more]
Q0J5Y3_ORYSJ0.0e+0055.20Os08g0389500 protein OS=Oryza sativa subsp. japonica GN=Os08g0389500 PE=4 SV=1[more]
Q7XTU6_ORYSJ0.0e+0051.50OSJNBb0034I13.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0034I13.10 PE=... [more]
Q8L4X0_ORYSJ0.0e+0050.80Os10g0130700 protein OS=Oryza sativa subsp. japonica GN=OSJNAb0072F04.11 PE=4 SV... [more]
BLAST of CmoCh16G000310 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.11.8e-10039.05 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.16.0e-3536.00ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
ATMG00820.17.4e-1742.42ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00710.14.6e-1136.84ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
ATMG00240.12.8e-0841.77ATMG00240.1 Gag-Pol-related retrotransposon family protein[more]
BLAST of CmoCh16G000310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|38344222|emb|CAE03692.2|0.0e+0058.54OSJNBb0026E15.10 [Oryza sativa Japonica Group][more]
gi|116634828|emb|CAH66352.1|0.0e+0057.61OSIGBa0135C09.3 [Oryza sativa Indica Group][more]
gi|113623687|dbj|BAF23632.1|0.0e+0055.20Os08g0389500 [Oryza sativa Japonica Group][more]
gi|21741247|emb|CAD41731.1|0.0e+0051.50OSJNBb0034I13.10 [Oryza sativa Japonica Group][more]
gi|20514806|gb|AAM23251.1|AC092553_170.0e+0050.80Putative pol polyprotein [Oryza sativa Japonica Group][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR013103RVT_2
IPR025724GAG-pre-integrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009536 plastid
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G000310.1CmoCh16G000310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 538..652
score: 2.6
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 536..702
score: 26
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 273..297
score: 7.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 281..297
score: 6.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 282..295
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 264..304
score: 1.4
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 540..706
score: 8.4
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 539..711
score: 1.11
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 900..1144
score: 8.7E
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 457..524
score: 1.6
NoneNo IPR availableunknownCoilCoilcoord: 196..216
scor
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 63..318
score: 0.0coord: 367..1305
score:
NoneNo IPR availablePANTHERPTHR11439:SF127SUBFAMILY NOT NAMEDcoord: 63..318
score: 0.0coord: 367..1305
score:
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 73..212
score: 4.1
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 900..1122
score: 5.78E-25coord: 1152..1336
score: 5.78