CmoCh16G000110 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGAGTTGGGAGGGATTATAAATAGGCATACGCCATTTTCTCTTAGGGTTTATATCTTTTCCCCCTTTTCTTCGTTTTCTTATTTACATTATTATTTGGGCACGATGAAATAAGAGTCATAACCTCCCTCCCTCTCTCCCGCTCCCCTGTTCTTCGTTCGTTCGTTCATTCATTCATTCATCCCCCTCTCGCTTGGCGATAACGCTCCGGCAAAACTCCCTTTTTCTTTTTCTTCTTTCTATTCCGTCGTTCTTCCACTTCCTATCAACCGCATTTGTTTAGAAAAGAAAAGGAAAAGGAAAAAGACAAATATTTGTACGCGGGTGGGTTTTTGTTATATAATTGGATCCAACGCTGGAGGGCGAGGAGTCAAGAATGAGAAAGGAGAGACGACGCGATAAGAAGATGAAAGGAAGGATTTCGATGATTGGGAGTTACGCCATTGCATCTTCCATCAAAGACCACCACCATCAGCGCCCTTCCATCACCTGCACTACCTTTAATATACTCGCTCCCATTTACAAGCGTCTCAATCAACAGGTTCGATTCCTCCTCTCTTTTTCTTTTTCAATTTTTCATCTCCCTTCGATTATTCGGATTCTAACGGATCCATGGATGGATGGATGCAAAACAGGATCCCAGTTGCCGCGAAAGCGATTACAGGACATACTGGCTAGCCAGAAACCAGAGAATTCTCGATTGGCTCTTGTATGAGAAATCTTCCATTATCTGCCTTCAGGTTCGGATTTCTTTTTTCTAGATCGAGTCGCAAGCATTCACGTTTCTTTCTGATTTTATCCTTTCACAAACGAGGCCGTTGATGTGTGCGTCCTATTTGCTTTTCAACTCTGGCCTTGGGCAGGAATTCTGGGTTGGAAACGAAGAACTTGTAAATATATACGAAAACAGACTCCGCAATGCCGGTTATATCAGTTTCAAGCTTGCTCGGACCAATAACCGTGGCGATGGTACGTTTTCCCTCTTTTACTCAACACTCATCATTCAGACGTATCCGCATCAAGGTTTTTTAAGAGGATAGGATTTCGTGAATATTAGATTCTGCATCAAGGTTTTTCAAGACTAGGCAATGAGTTTGTTTTTGTAAGAGGATTTCGTGAATACTATTAGATTATGGTCTCCTCCTAGTCCTCATTTGGAAGCAGGCCTTCTCTGTTCGTATTATGTTTCTTCGGAATTCTGCCTGTTAATTCTTTTCAAATTGAGGTTGATTGGATCTGAATCTTCAGGTTTGTTGACTGCGGTGCATAAGGATTATTTTAGAGTGGTAAACTACCGAGAGCTGCTATTTCACGATTGCGGAGACCGTGTTGCGCAGCTATTACATGTTGAATTAGCAGTTCCGTTTTCACAGTGCCGAAACAATGATATTCGACAGGAAATTCTCATTGTCAACACTCACTTGTTATTTCCTCATGATTCTAGTCTCTGTCTTGTCCGGTTGAATCAAGTAGGTGCTCTTCTCTTTGCATTTGTGCAACTTTTCACTGCTTCCAATTCCAATTCCAATTCCTAAAGATTTCAACCTTATTCTTCCATGTCCTTCAGGTATACAAAATCCTGCAATACGTTGAATCTTATCAGAAGGAAAACAAACTCAATCCCATGCCCATCATACTTTGCGGGTAAGTTTCGTTCCCTTCCTTCTTAATTCTTTGTTGTAATTTTGTTCCCTTCCAGACAGTCAATCTCTTGCTATCTGCTTCGACTAGAACAACATGGTACTTTTAAGAAGGTCTTTCTGAATGCTTGTTTTTTTGTTTAGTGACTGGAATGGAAGCAAACGTGGACATGTGTACAAGTTTCTTAGGTCGCAGGGGTTTGTATCGTCATATGACACGGCTCACCAATACGCAGATGCAGATGCACGCAAGGTTAGCATCTTCAACTACGTTCCTCATATAAAAAAATAAATAGTCAACGTTGACTATTTTTCTAACTTGGGTCGTGCCTCTCTTTCTTGTGTGTAAACCAGTGGGTGAGTCACCGGAATCATCGGGGAAACATTTGCGGGGTTGACTTCATATGGCTTTTAAATCCGAACGGTTACAGAAAATTGCTAAAAACAAGCTGGAGTGAAGCTGTTTTTGGCATGTTCAAGGTAAAAAATTCTTCTTCTCCCAAACTAATTGCTGTGACTTTCAATTTATAACAATATTTGCAACTTATCTGTCTTGGGCGATAGTTTCCTGCTTATCTTTCATTGCATTTCCATGTATGATTTTTGAATTCGTCGCCATCTGTTAGGTTGTTGTATGCTCAACCATGGACATTTTTCTGCTTCCTTTTTCAATACAACAAATGTGAGAGATGAAGATTTGAATTATGTTCATGTTGGCTTTTTGCTTAATTCATGAGTGTATATAGAACAACACTCGAGTACTTAAACATTGGTGTGAGTACCAAGTTGTTTTCTTTCTCCAATTCTAATACCATCTTATTATTTTCAGTATCTGCTTCGAAGAGCTTCGCTGACAGAGGATGATGCATTTGCCTTTCTGAAGGCGGACAATGATGGTGACTATATAACCTACTCTGGTTTCTGTGAGGCACTTCGACAGGTAGATGCTGAGGCTTGCTGATTTAAGTTTTGAAAACTGTATGTTGAATTTGTTTGGGGCCTTCCCTCGGGAAAACTATCCTCATTGGTTTGAATTGAAAAACTGTGAATGGTTAAATCATTTTCTGCAGCTCAATTTAACTGGTCATCCTCATGGCCTTAGCGTTGGAGAGATAAAGGACTTGTGGGTACAAGCAGACAGTGATGGAAATGGCATTCTCGATCATAATGAATTTCAGGTAAGCTTTTCCAGTTCAAGTGTGTTCAACTTCTTTACTTAAAAAAACTAGAGTAGACAGGAGTTAAACAGGCATGGATATTGATATTGATAGTAATGGTGGGTGTGTTTTGTGGTATAACCATCCCATGACACAGCAGAGAATTTGGAATTCTACTGGGACCGAGGAGAGGGATGAGAAAGGCAATGAGGTTGAATCAAAGGAAAATCAGGAGCAAACAATTGGTTTCAGTGTTGAGAATGCAGTCCTGTTTCCTGCTGAAGTGGAGAAAGGAAGGTGGCCTGAAGACTACTCCCTTTCAGATCATGCACGACTCACTGTGGTGTTCGCACCCATAAGAATGCCCTGTTCTCAGTTGATATCCTGATAGCATACAATTGTTACTGTATACAAAAAGAAGTGGAAACCACAATTCACAATTGCAATGCTCGCTCTCGAGGGATGAAACGTCGAGAGTTTTCTGGGCACGCACACAACTCAGATTGATTTACGTCCAATACCATTTTCATTTTCCATCCTGGACTTGGAGGAAGGAACACATCTGCAACCACAAGCTCGCATCCATTTTAGGGGAGCAGACTCCGACCCCTCTTAATCCCTGCATCTACACACTACTACAGTCAATTGTCGAACAAGTGAAAGGAAGGATAGAGCCCATAATGTGTACAGATACATACTACAGACAGAGACAGCTATTGGTTACAGAAATAATTGGCCCTTGCTTATGTACTTTTTACGGGACGTATAACATATGTACAGCTTCTTAGTACTTTTGGTATTTGGTATAGAAACAGTTCATTAGGTCGGGAATGGAGGACGAGATAGGGTCATCACTGTAAAGAACCAAATGAATGTGTTTGTTTTAAAGTGATTGATAAAAGTGACTTTTTTTCTTCTCTTTTTTGCTTCTTGAAAAACACGCAACAAAGGTGAATAGAACAAGCACAAACAGTCTTCCTTAATGAACAAGCAAAAAGTTGTGCCTCCAAATAGCCCCAAAACTTCCAATGAATGAAC AGGAGTTGGGAGGGATTATAAATAGGCATACGCCATTTTCTCTTAGGGTTTATATCTTTTCCCCCTTTTCTTCGTTTTCTTATTTACATTATTATTTGGGCACGATGAAATAAGAGTCATAACCTCCCTCCCTCTCTCCCGCTCCCCTGTTCTTCGTTCGTTCGTTCATTCATTCATTCATCCCCCTCTCGCTTGGCGATAACGCTCCGGCAAAACTCCCTTTTTCTTTTTCTTCTTTCTATTCCGTCGTTCTTCCACTTCCTATCAACCGCATTTGTTTAGAAAAGAAAAGGAAAAGGAAAAAGACAAATATTTGTACGCGGGTGGGTTTTTGTTATATAATTGGATCCAACGCTGGAGGGCGAGGAGTCAAGAATGAGAAAGGAGAGACGACGCGATAAGAAGATGAAAGGAAGGATTTCGATGATTGGGAGTTACGCCATTGCATCTTCCATCAAAGACCACCACCATCAGCGCCCTTCCATCACCTGCACTACCTTTAATATACTCGCTCCCATTTACAAGCGTCTCAATCAACAGGATCCCAGTTGCCGCGAAAGCGATTACAGGACATACTGGCTAGCCAGAAACCAGAGAATTCTCGATTGGCTCTTGTATGAGAAATCTTCCATTATCTGCCTTCAGGAATTCTGGGTTGGAAACGAAGAACTTGTAAATATATACGAAAACAGACTCCGCAATGCCGGTTATATCAGTTTCAAGCTTGCTCGGACCAATAACCGTGGCGATGGTTTGTTGACTGCGGTGCATAAGGATTATTTTAGAGTGGTAAACTACCGAGAGCTGCTATTTCACGATTGCGGAGACCGTGTTGCGCAGCTATTACATGTTGAATTAGCAGTTCCGTTTTCACAGTGCCGAAACAATGATATTCGACAGGAAATTCTCATTGTCAACACTCACTTGTTATTTCCTCATGATTCTAGTCTCTGTCTTGTCCGGTTGAATCAAGTATACAAAATCCTGCAATACGTTGAATCTTATCAGAAGGAAAACAAACTCAATCCCATGCCCATCATACTTTGCGGTGACTGGAATGGAAGCAAACGTGGACATGTGTACAAGTTTCTTAGGTCGCAGGGGTTTGTATCGTCATATGACACGGCTCACCAATACGCAGATGCAGATGCACGCAAGTATCTGCTTCGAAGAGCTTCGCTGACAGAGGATGATGCATTTGCCTTTCTGAAGGCGGACAATGATGGTGACTATATAACCTACTCTGGTTTCTGTGAGGCACTTCGACAGCTCAATTTAACTGGTCATCCTCATGGCCTTAGCGTTGGAGAGATAAAGGACTTGTGGGTACAAGCAGACAGTGATGGAAATGGCATTCTCGATCATAATGAATTTCAGCAGAGAATTTGGAATTCTACTGGGACCGAGGAGAGGGATGAGAAAGGCAATGAGGTTGAATCAAAGGAAAATCAGGAGCAAACAATTGGTTTCAGTGTTGAGAATGCAGTCCTGTTTCCTGCTGAAGTGGAGAAAGGAAGGTGGCCTGAAGACTACTCCCTTTCAGATCATGCACGACTCACTGTGGTGTTCGCACCCATAAGAATGCCCTGTTCTCAGTTGATATCCTGATAGCATACAATTGTTACTGTATACAAAAAGAAGTGGAAACCACAATTCACAATTGCAATGCTCGCTCTCGAGGGATGAAACGTCGAGAGTTTTCTGGGCACGCACACAACTCAGATTGATTTACGTCCAATACCATTTTCATTTTCCATCCTGGACTTGGAGGAAGGAACACATCTGCAACCACAAGCTCGCATCCATTTTAGGGGAGCAGACTCCGACCCCTCTTAATCCCTGCATCTACACACTACTACAGTCAATTGTCGAACAAGTGAAAGGAAGGATAGAGCCCATAATGTGTACAGATACATACTACAGACAGAGACAGCTATTGGTTACAGAAATAATTGGCCCTTGCTTATGTACTTTTTACGGGACGTATAACATATGTACAGCTTCTTAGTACTTTTGGTATTTGGTATAGAAACAGTTCATTAGGTCGGGAATGGAGGACGAGATAGGGTCATCACTGTAAAGAACCAAATGAATGTGTTTGTTTTAAAGTGATTGATAAAAGTGACTTTTTTTCTTCTCTTTTTTGCTTCTTGAAAAACACGCAACAAAGGTGAATAGAACAAGCACAAACAGTCTTCCTTAATGAACAAGCAAAAAGTTGTGCCTCCAAATAGCCCCAAAACTTCCAATGAATGAAC ATGAGAAAGGAGAGACGACGCGATAAGAAGATGAAAGGAAGGATTTCGATGATTGGGAGTTACGCCATTGCATCTTCCATCAAAGACCACCACCATCAGCGCCCTTCCATCACCTGCACTACCTTTAATATACTCGCTCCCATTTACAAGCGTCTCAATCAACAGGATCCCAGTTGCCGCGAAAGCGATTACAGGACATACTGGCTAGCCAGAAACCAGAGAATTCTCGATTGGCTCTTGTATGAGAAATCTTCCATTATCTGCCTTCAGGAATTCTGGGTTGGAAACGAAGAACTTGTAAATATATACGAAAACAGACTCCGCAATGCCGGTTATATCAGTTTCAAGCTTGCTCGGACCAATAACCGTGGCGATGGTTTGTTGACTGCGGTGCATAAGGATTATTTTAGAGTGGTAAACTACCGAGAGCTGCTATTTCACGATTGCGGAGACCGTGTTGCGCAGCTATTACATGTTGAATTAGCAGTTCCGTTTTCACAGTGCCGAAACAATGATATTCGACAGGAAATTCTCATTGTCAACACTCACTTGTTATTTCCTCATGATTCTAGTCTCTGTCTTGTCCGGTTGAATCAAGTATACAAAATCCTGCAATACGTTGAATCTTATCAGAAGGAAAACAAACTCAATCCCATGCCCATCATACTTTGCGGTGACTGGAATGGAAGCAAACGTGGACATGTGTACAAGTTTCTTAGGTCGCAGGGGTTTGTATCGTCATATGACACGGCTCACCAATACGCAGATGCAGATGCACGCAAGTATCTGCTTCGAAGAGCTTCGCTGACAGAGGATGATGCATTTGCCTTTCTGAAGGCGGACAATGATGGTGACTATATAACCTACTCTGGTTTCTGTGAGGCACTTCGACAGCTCAATTTAACTGGTCATCCTCATGGCCTTAGCGTTGGAGAGATAAAGGACTTGTGGGTACAAGCAGACAGTGATGGAAATGGCATTCTCGATCATAATGAATTTCAGCAGAGAATTTGGAATTCTACTGGGACCGAGGAGAGGGATGAGAAAGGCAATGAGGTTGAATCAAAGGAAAATCAGGAGCAAACAATTGGTTTCAGTGTTGAGAATGCAGTCCTGTTTCCTGCTGAAGTGGAGAAAGGAAGGTGGCCTGAAGACTACTCCCTTTCAGATCATGCACGACTCACTGTGGTGTTCGCACCCATAAGAATGCCCTGTTCTCAGTTGATATCCTGA
BLAST of CmoCh16G000110 vs. Swiss-Prot
Match: YC22_ARATH (Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2) HSP 1 Score: 365.9 bits (938), Expect = 5.7e-100 Identity = 167/231 (72.29%), Postives = 206/231 (89.18%), Query Frame = 1
BLAST of CmoCh16G000110 vs. Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 8.7e-08 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TrEMBL
Match: A0A0A0KVP1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G091940 PE=4 SV=1) HSP 1 Score: 769.2 bits (1985), Expect = 2.5e-219 Identity = 384/447 (85.91%), Postives = 393/447 (87.92%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TrEMBL
Match: M5X151_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005781mg PE=4 SV=1) HSP 1 Score: 674.1 bits (1738), Expect = 1.1e-190 Identity = 335/443 (75.62%), Postives = 365/443 (82.39%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TrEMBL
Match: A0A061G2E8_THECC (Calcium-binding endonuclease/exonuclease/phosphatase family OS=Theobroma cacao GN=TCM_015537 PE=4 SV=1) HSP 1 Score: 646.4 bits (1666), Expect = 2.4e-182 Identity = 327/452 (72.35%), Postives = 361/452 (79.87%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TrEMBL
Match: A0A067DNB6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013259mg PE=4 SV=1) HSP 1 Score: 639.8 bits (1649), Expect = 2.3e-180 Identity = 320/444 (72.07%), Postives = 359/444 (80.86%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TrEMBL
Match: V4TM78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020139mg PE=4 SV=1) HSP 1 Score: 639.8 bits (1649), Expect = 2.3e-180 Identity = 320/444 (72.07%), Postives = 359/444 (80.86%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TAIR10
Match: AT5G54130.2 (AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family) HSP 1 Score: 614.8 bits (1584), Expect = 3.9e-176 Identity = 308/442 (69.68%), Postives = 349/442 (78.96%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TAIR10
Match: AT1G02270.1 (AT1G02270.1 Calcium-binding endonuclease/exonuclease/phosphatase family) HSP 1 Score: 365.9 bits (938), Expect = 3.2e-101 Identity = 167/231 (72.29%), Postives = 206/231 (89.18%), Query Frame = 1
BLAST of CmoCh16G000110 vs. TAIR10
Match: AT3G18500.3 (AT3G18500.3 DNAse I-like superfamily protein) HSP 1 Score: 59.7 bits (143), Expect = 4.9e-09 Identity = 51/177 (28.81%), Postives = 82/177 (46.33%), Query Frame = 1
BLAST of CmoCh16G000110 vs. NCBI nr
Match: gi|778691712|ref|XP_011653334.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 isoform X1 [Cucumis sativus]) HSP 1 Score: 775.4 bits (2001), Expect = 4.9e-221 Identity = 385/447 (86.13%), Postives = 394/447 (88.14%), Query Frame = 1
BLAST of CmoCh16G000110 vs. NCBI nr
Match: gi|659125910|ref|XP_008462915.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 isoform X1 [Cucumis melo]) HSP 1 Score: 770.8 bits (1989), Expect = 1.2e-219 Identity = 383/447 (85.68%), Postives = 391/447 (87.47%), Query Frame = 1
BLAST of CmoCh16G000110 vs. NCBI nr
Match: gi|449438851|ref|XP_004137201.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 isoform X2 [Cucumis sativus]) HSP 1 Score: 769.2 bits (1985), Expect = 3.5e-219 Identity = 384/447 (85.91%), Postives = 393/447 (87.92%), Query Frame = 1
BLAST of CmoCh16G000110 vs. NCBI nr
Match: gi|659125912|ref|XP_008462916.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 isoform X2 [Cucumis melo]) HSP 1 Score: 764.6 bits (1973), Expect = 8.7e-218 Identity = 382/447 (85.46%), Postives = 390/447 (87.25%), Query Frame = 1
BLAST of CmoCh16G000110 vs. NCBI nr
Match: gi|645257892|ref|XP_008234623.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 [Prunus mume]) HSP 1 Score: 677.2 bits (1746), Expect = 1.8e-191 Identity = 336/443 (75.85%), Postives = 366/443 (82.62%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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