CmoCh15G013020 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G013020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin-conjugating enzyme E2 5
Location	Cmo_Chr15 : 8938599 .. 8940639 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCCCAAGAACAAAGCTCCTATAAATTCCATTAATTTCTCTTCCAATTTTTTTTATCTTCCAAGCCAACAATTTGACTCTTCTTTTACTTCTAATCGCCACACCTTGATTCACTGCTTCCGTGTTCGAAGGAAATCTCGTTTCTCTTCCTATCTCCGCTCGTTTCTTGCCTTTCTTTCCACTTTCTCTCTCGGGACCTAATCCATGTCTTCTCCAAGCAAGCGCCGCGAGATGGATTTGATGAAACTGTAAGTTTTTCCACCTTCCATGCCTTCCGATTTGATTGTTCTGTTCTTCTTTTACGCTTCTGGTTTGACTGTGCTGATTTTGAATCAGGATGATGAGCGATTATAAGGTCGAAACGATCAATGATAGTATGCAAGAGTTCTATGTCGACTTCCATGGACCGAAAGACAGTAAATCTTCTATATCCTTCTTTGATTTTTCAATAGGGTTTTGTTAATTTTGTTGATTCTATCTCTTTATGATTCCCCCCTTTTCCAGATAGCTTAAGAACTTTGTAATCCTGTGATTATTGTTTTGAGGCTTTGTAGTTTTGTTCTTCTAAATCTAGAGTGTTTGGTGTTTAGAATTTGTTCTTAATTCTTGCTGGCTTTCCCTTCTGAAATTAAGCCCTGTTGATTTAGATAATTCTAGGCGATATGAATTTGGATTGAAGGATTTCTTATGTGATTTCCTTGAAATTGGAAGGTCTTTATGAAGGAGGTGTGTGGAGGATTAAGGTGGAGTTGCCTGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCAAATGTTGATGAAATGTGAGTCGACTGACTTCGACGTCGAAACTTATTACATTGATTCTTACTATTTGCAGGCTGTTGATATCGATGTTTATGAATTGCAGGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGGTAGGAAACTTCTTTTTGGGATTATATATTATGGTGACCAATTGGTTTTTACATTGTGGATATTGTAATGCTGCAATGTAACTGAGGAATTGTGATCTAATTCGGGTTTTTTTTTTATGCTGTACAGACCTTGTAAATGTTTTTGATGTGTTTCTTCCACAACTTCTCTTGTATCCCAACCCGTCCGACCCATTGAATGGAGAAGCTGCTGCAGTAATGATGCGTGATCGTACTGCATACGAGCAAAGAGTAAAAGGTACTTCTAAGTTCTATCGAAGATTTGGTAGTTTGAACGAATTTTAATCCATTGGCTCGGGTGGTAACACGAAAACTAGATTTAGTAGTTTTTCTATATGATAATGGCTGAGAATTTTCTTATTGTAAACTCGATTTTTGGTTGTTGATGTTGTGCTAATCCACATGATAAACTTACTAGCCCCGAGCTTCATCCGTAAAGAAATTCATATTTCAGTGATGATGGGTGTAACAGTCTAAACTCACCGCTAGGAGATATTGTCCTCTTTGGGCTTACTGGGCTTACCCTTCCGGGCTTCCCCTCAAAGTTTTTAAAATGCGTCTGCTAGGAAGAGGTTTTCACACCCTATAAACAATGTTTCATTCTCCTCTCCAACCGATTCGAGGTCTAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCATTTTGCCAAACCCTTTTGTGTTCTGATTACGAAACTATTGATATTGATCATATGGTTGTCACTTCGGATACATCATTAATACCCACTTTTCGATCTCTCGTACATCTAATGGTTATAAACTTAGCAGCCACAGTATAGAAGTTGTATTGATTAGTTTCCTCCCCCATCCCCCAACCTGACTCAACGTCCGAAACTCTACATGGTTCGAGACCTGTAAAACTCCCCAATCTCGTTCTTCTTTTTTACATTTCGATCATGCATGTCCAGAATTCTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGCTGCTCCTGAGGAGAAATCTAGTGATGAGGAGCTGAGTGAAGATGATTATTCCTCAAATGATGAGGGCATGGCAGGCCAAGCTGATGATTGA

mRNA sequence

AGCTCCCAAGAACAAAGCTCCTATAAATTCCATTAATTTCTCTTCCAATTTTTTTTATCTTCCAAGCCAACAATTTGACTCTTCTTTTACTTCTAATCGCCACACCTTGATTCACTGCTTCCGTGTTCGAAGGAAATCTCGTTTCTCTTCCTATCTCCGCTCGTTTCTTGCCTTTCTTTCCACTTTCTCTCTCGGGACCTAATCCATGTCTTCTCCAAGCAAGCGCCGCGAGATGGATTTGATGAAACTGATGATGAGCGATTATAAGGTCGAAACGATCAATGATAGTATGCAAGAGTTCTATGTCGACTTCCATGGACCGAAAGACAGTCTTTATGAAGGAGGTGTGTGGAGGATTAAGGTGGAGTTGCCTGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGGTAGGAAACTTCTTTTTGGGATTATATATTATGACCTTGTAAATGTTTTTGATGTGTTTCTTCCACAACTTCTCTTGTATCCCAACCCGTCCGACCCATTGAATGGAGAAGCTGCTGCAGTAATGATGCGTGATCGTACTGCATACGAGCAAAGAGTAAAAGAATTCTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGCTGCTCCTGAGGAGAAATCTAGTGATGAGGAGCTGAGTGAAGATGATTATTCCTCAAATGATGAGGGCATGGCAGGCCAAGCTGATGATTGA

Coding sequence (CDS)

ATGTCTTCTCCAAGCAAGCGCCGCGAGATGGATTTGATGAAACTGATGATGAGCGATTATAAGGTCGAAACGATCAATGATAGTATGCAAGAGTTCTATGTCGACTTCCATGGACCGAAAGACAGTCTTTATGAAGGAGGTGTGTGGAGGATTAAGGTGGAGTTGCCTGATGCTTATCCTTACAAGTCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCAAATGTTGATGAAATGTCGGGCTCGGTTTGTTTGGATGTTATCAACCAGACATGGAGCCCTATGTTTGGTAGGAAACTTCTTTTTGGGATTATATATTATGACCTTGTAAATGTTTTTGATGTGTTTCTTCCACAACTTCTCTTGTATCCCAACCCGTCCGACCCATTGAATGGAGAAGCTGCTGCAGTAATGATGCGTGATCGTACTGCATACGAGCAAAGAGTAAAAGAATTCTGTGAGAAATATGCAAAGCCAGAAGACATTGGAGCTGCTCCTGAGGAGAAATCTAGTGATGAGGAGCTGAGTGAAGATGATTATTCCTCAAATGATGAGGGCATGGCAGGCCAAGCTGATGATTGA

Homology

[Close]

BLAST of CmoCh15G013020 vs. Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 4.0e-80
Identity = 147/186 (79.03%), Postives = 164/186 (88.17%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDSLY+GGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMF           DLVNVF+ FLPQ
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF-----------DLVNVFETFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDR AYEQRVKE+CEKYAKP   G   E+KSSDEELSE++
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKP---GEGSEDKSSDEELSEEE 172

Query: 181 YSSNDE 187
           Y S++E
Sbjct: 181 YGSDNE 172

[Close]

BLAST of CmoCh15G013020 vs. Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.9e-78
Identity = 143/194 (73.71%), Postives = 163/194 (84.02%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKV+ IND M EF+V FHGPKDS+Y+GGVW+++VEL +AYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGF NKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVN+F+VFLPQ
Sbjct: 61  YKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNIFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSE-D 180
           LLLYPNPSDPLNGEAA++MMRD+ AYE +VKE+CE+YAKPEDI    EE+ SDEELS+ +
Sbjct: 121 LLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYAKPEDISPEEEEEESDEELSDAE 180

Query: 181 DYSSNDEGMAGQAD 194
            Y S DE + G AD
Sbjct: 181 GYDSGDEAIMGHAD 183

[Close]

BLAST of CmoCh15G013020 vs. Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2)

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-77
Identity = 148/198 (74.75%), Postives = 165/198 (83.33%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS+YEGGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+ FLPQ
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFETFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDR  YEQRVKE+CEKYAKP    A  EE SSD+E+SED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDDEMSEDE 180

Query: 181 YSS-----NDEGMAGQAD 194
           Y+S     +D  +AG+ D
Sbjct: 181 YASDGDDEDDVAIAGKLD 184

[Close]

BLAST of CmoCh15G013020 vs. Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 3.1e-72
Identity = 132/193 (68.39%), Postives = 157/193 (81.35%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DSLY+GGVW+IKVELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMF           DL+NVF+ FLPQ
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMF-----------DLINVFESFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDP NGEAA+++MRDR AYE +VKE+CEKYAKPE+I +  ++  S  E   D 
Sbjct: 121 LLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDS 180

Query: 181 YSSNDEGMAGQAD 194
              +D+ + G+AD
Sbjct: 181 DDDDDDEIVGKAD 182

[Close]

BLAST of CmoCh15G013020 vs. Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-58
Identity = 109/193 (56.48%), Postives = 142/193 (73.58%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSP +R E D+MKL+MSDY+V  +ND+MQEFYV FHGP ++ Y GG+W++ VELP  YP
Sbjct: 1   MSSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           +KSPSIGFVN+I+HPN+DE+SGSVCLDVINQTWSPMF           D++N+F+VFLPQ
Sbjct: 61  WKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMF-----------DMINIFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LL YPN SDPLNGEAAA+++R+   Y  +V+++  +YA  ED      + S D+ +S  D
Sbjct: 121 LLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYANKEDADITLNDSSDDDTMSSID 180

Query: 181 YSSNDEGMAGQAD 194
             S DE +AG  D
Sbjct: 181 TESGDE-IAGPMD 181

[Close]

BLAST of CmoCh15G013020 vs. TrEMBL
Match: A0A0A0KNV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152970 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.9e-93
Identity = 175/193 (90.67%), Postives = 179/193 (92.75%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEELSEDD
Sbjct: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDD 180

Query: 181 YSSNDEGMAGQAD 194
           YSS DE MAGQAD
Sbjct: 181 YSSGDEAMAGQAD 182

[Close]

BLAST of CmoCh15G013020 vs. TrEMBL
Match: W9QPJ6_9ROSA (Ubiquitin-conjugating enzyme E2 5 OS=Morus notabilis GN=L484_024253 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.1e-88
Identity = 166/193 (86.01%), Postives = 176/193 (91.19%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEFYVDFHGPK+S YEGGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVDFHGPKESPYEGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDRT YEQRVKE+CEKYAK EDIGAA EEKSSDEELSED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRTTYEQRVKEYCEKYAKSEDIGAAEEEKSSDEELSEDE 180

Query: 181 YSSNDEGMAGQAD 194
           Y+S+DEGMAG+AD
Sbjct: 181 YASSDEGMAGKAD 182

[Close]

BLAST of CmoCh15G013020 vs. TrEMBL
Match: A5AU32_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00070 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-87
Identity = 165/193 (85.49%), Postives = 174/193 (90.16%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE +ND MQEFYVDFHGP DS Y GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVDFHGPGDSPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDR AYEQRVKE+CEKYAKPE+IGAAPEEKSSDEELSED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPENIGAAPEEKSSDEELSEDN 180

Query: 181 YSSNDEGMAGQAD 194
           Y S+DE +AGQAD
Sbjct: 181 YESSDEAVAGQAD 182

[Close]

BLAST of CmoCh15G013020 vs. TrEMBL
Match: A5B1R0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02280 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.8e-87
Identity = 167/194 (86.08%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEFYV FHGP DS Y GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPSDSPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSD-EELSED 180
           LLLYPNPSDPLNGEAAA+MMRDRTAYEQRVKE+CEKYAKPED+GAAPEEKSSD EELSED
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRTAYEQRVKEYCEKYAKPEDVGAAPEEKSSDEEELSED 180

Query: 181 DYSSNDEGMAGQAD 194
           DY S+DE +AGQAD
Sbjct: 181 DYDSSDEAVAGQAD 183

[Close]

BLAST of CmoCh15G013020 vs. TrEMBL
Match: B9RCE6_RICCO (Ubiquitin-conjugating enzyme h, putative OS=Ricinus communis GN=RCOM_1687380 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.0e-86
Identity = 160/193 (82.90%), Postives = 174/193 (90.16%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE +ND MQEFYV+F+GPKDS Y+GG+WRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVEFNGPKDSPYQGGLWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDRTAYEQRVKE+CEKYAKPED+G  PEEKSSDEELS+DD
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRTAYEQRVKEYCEKYAKPEDVGVKPEEKSSDEELSDDD 180

Query: 181 YSSNDEGMAGQAD 194
           Y S DE +AG+AD
Sbjct: 181 YGSEDEQVAGKAD 182

[Close]

BLAST of CmoCh15G013020 vs. TAIR10
Match: AT5G41340.1 (AT5G41340.1 ubiquitin conjugating enzyme 4)

HSP 1 Score: 298.9 bits (764), Expect = 2.3e-81
Identity = 147/186 (79.03%), Postives = 164/186 (88.17%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMD+MKLMMSDYKVETIND MQEFYV+F+GPKDSLY+GGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPS+GF+ KIYHPNVDE+SGSVCLDVINQTWSPMF           DLVNVF+ FLPQ
Sbjct: 61  YKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF-----------DLVNVFETFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDR AYEQRVKE+CEKYAKP   G   E+KSSDEELSE++
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKP---GEGSEDKSSDEELSEEE 172

Query: 181 YSSNDE 187
           Y S++E
Sbjct: 181 YGSDNE 172

[Close]

BLAST of CmoCh15G013020 vs. TAIR10
Match: AT1G63800.1 (AT1G63800.1 ubiquitin-conjugating enzyme 5)

HSP 1 Score: 290.8 bits (743), Expect = 6.2e-79
Identity = 148/198 (74.75%), Postives = 165/198 (83.33%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEF+V+F GPKDS+YEGGVW+I+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPS+GF+ KIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+ FLPQ
Sbjct: 61  YKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFETFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDR  YEQRVKE+CEKYAKP    A  EE SSD+E+SED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPR---ADTEEMSSDDEMSEDE 180

Query: 181 YSS-----NDEGMAGQAD 194
           Y+S     +D  +AG+ D
Sbjct: 181 YASDGDDEDDVAIAGKLD 184

[Close]

BLAST of CmoCh15G013020 vs. TAIR10
Match: AT2G46030.1 (AT2G46030.1 ubiquitin-conjugating enzyme 6)

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-73
Identity = 132/193 (68.39%), Postives = 157/193 (81.35%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           M+SPSKRREMD+MKLMMSDYKV+T+ND +Q FYV FHGP DSLY+GGVW+IKVELP+AYP
Sbjct: 1   MASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPS+GFVNKIYHPNVDE SG+VCLDVINQTWSPMF           DL+NVF+ FLPQ
Sbjct: 61  YKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMF-----------DLINVFESFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDP NGEAA+++MRDR AYE +VKE+CEKYAKPE+I +  ++  S  E   D 
Sbjct: 121 LLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAKPEEILSDDDDDDSMSEDGSDS 180

Query: 181 YSSNDEGMAGQAD 194
              +D+ + G+AD
Sbjct: 181 DDDDDDEIVGKAD 182

[Close]

BLAST of CmoCh15G013020 vs. TAIR10
Match: AT1G16890.3 (AT1G16890.3 ubiquitin-conjugating enzyme 36)

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = 1


Query: 27  DSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCL 86
           ++M+ F V   GP  S YEGGV+++++ LP+ YP  +P + F+ KIYHPN+D++ G +CL
Sbjct: 41  ENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICL 100

Query: 87  DVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQLLLYPNPSDPLNGEAAAVMMRDRTAY 146
           D++   WSP    + +             + +  LL  PNP DPL+   A     +    
Sbjct: 101 DILKDKWSPALQIRTVL------------LSIQALLSAPNPDDPLSENIAKHWKSNEAEA 159

Query: 147 EQRVKEFCEKYA 159
            +  KE+   YA
Sbjct: 161 VETAKEWTRLYA 159

[Close]

BLAST of CmoCh15G013020 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16
Identity = 47/160 (29.38%), Postives = 84/160 (52.50%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETI----NDSMQEFYVDFHGPKDSLYEGGVWRIKVELP 60
           M++P+K+R M   K +  D  V       ++++  +     GP+D+ ++GG +++ +   
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 61  DAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDV 120
           + YP K P + FV++++HPN+    GS+CLD++   WSP+           YD+  V   
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNI-YADGSICLDILQNQWSPI-----------YDVAAVL-T 120

Query: 121 FLPQLLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEK 157
            +  LL  PNP  P N EAA +   ++  Y ++V E  E+
Sbjct: 121 SIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQ 147

[Close]

BLAST of CmoCh15G013020 vs. NCBI nr
Match: gi|449452296|ref|XP_004143895.1| (PREDICTED: ubiquitin-conjugating enzyme E2 4 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 4.1e-93
Identity = 175/193 (90.67%), Postives = 179/193 (92.75%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLY+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKE+CEKYAKPEDIGA PEEKSSDEELSEDD
Sbjct: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDD 180

Query: 181 YSSNDEGMAGQAD 194
           YSS DE MAGQAD
Sbjct: 181 YSSGDEAMAGQAD 182

[Close]

BLAST of CmoCh15G013020 vs. NCBI nr
Match: gi|703071635|ref|XP_010089080.1| (Ubiquitin-conjugating enzyme E2 5 [Morus notabilis])

HSP 1 Score: 333.2 bits (853), Expect = 3.1e-88
Identity = 166/193 (86.01%), Postives = 176/193 (91.19%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEFYVDFHGPK+S YEGGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVDFHGPKESPYEGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDRT YEQRVKE+CEKYAK EDIGAA EEKSSDEELSED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRTTYEQRVKEYCEKYAKSEDIGAAEEEKSSDEELSEDE 180

Query: 181 YSSNDEGMAGQAD 194
           Y+S+DEGMAG+AD
Sbjct: 181 YASSDEGMAGKAD 182

[Close]

BLAST of CmoCh15G013020 vs. NCBI nr
Match: gi|225426200|ref|XP_002279927.1| (PREDICTED: ubiquitin-conjugating enzyme E2 4 isoform X1 [Vitis vinifera])

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 165/193 (85.49%), Postives = 174/193 (90.16%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE +ND MQEFYVDFHGP DS Y GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVDFHGPGDSPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDR AYEQRVKE+CEKYAKPE+IGAAPEEKSSDEELSED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPENIGAAPEEKSSDEELSEDN 180

Query: 181 YSSNDEGMAGQAD 194
           Y S+DE +AGQAD
Sbjct: 181 YESSDEAVAGQAD 182

[Close]

BLAST of CmoCh15G013020 vs. NCBI nr
Match: gi|225454282|ref|XP_002276343.1| (PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa [Vitis vinifera])

HSP 1 Score: 330.1 bits (845), Expect = 2.6e-87
Identity = 167/194 (86.08%), Postives = 174/194 (89.69%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEFYV FHGP DS Y GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPSDSPYHGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSD-EELSED 180
           LLLYPNPSDPLNGEAAA+MMRDRTAYEQRVKE+CEKYAKPED+GAAPEEKSSD EELSED
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRTAYEQRVKEYCEKYAKPEDVGAAPEEKSSDEEELSED 180

Query: 181 DYSSNDEGMAGQAD 194
           DY S+DE +AGQAD
Sbjct: 181 DYDSSDEAVAGQAD 183

[Close]

BLAST of CmoCh15G013020 vs. NCBI nr
Match: gi|1009156149|ref|XP_015896092.1| (PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Ziziphus jujuba])

HSP 1 Score: 329.7 bits (844), Expect = 3.4e-87
Identity = 162/193 (83.94%), Postives = 176/193 (91.19%), Query Frame = 1


Query: 1   MSSPSKRREMDLMKLMMSDYKVETINDSMQEFYVDFHGPKDSLYEGGVWRIKVELPDAYP 60
           MSSPSKRREMDLMKLMMSDYKVE IND MQEFYVDFHGPKDS Y+GGVWRI+VELPDAYP
Sbjct: 1   MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVDFHGPKDSSYQGGVWRIRVELPDAYP 60

Query: 61  YKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFGRKLLFGIIYYDLVNVFDVFLPQ 120
           YKSPSIGF+NKIYHPNVDEMSGSVCLDVINQTWSPMF           DLVNVF+VFLPQ
Sbjct: 61  YKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMF-----------DLVNVFEVFLPQ 120

Query: 121 LLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEFCEKYAKPEDIGAAPEEKSSDEELSEDD 180
           LLLYPNPSDPLNGEAAA+MMRDRTAY+QRVKE+CEKYAKPED+G A EE+SS+EELSED+
Sbjct: 121 LLLYPNPSDPLNGEAAALMMRDRTAYDQRVKEYCEKYAKPEDLGTAQEEESSEEELSEDE 180

Query: 181 YSSNDEGMAGQAD 194
           Y S+DEG+AG+AD
Sbjct: 181 YPSSDEGVAGKAD 182

The following BLAST results are available for this feature:

BLAST of CmoCh15G013020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBC4_ARATH	4.0e-80	79.03	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2	[more]
UBC4_WHEAT	4.9e-78	73.71	Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1	[more]
UBC5_ARATH	1.1e-77	74.75	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2	[more]
UBC6_ARATH	3.1e-72	68.39	Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2	[more]
UBC8_SCHPO	4.3e-58	56.48	Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of CmoCh15G013020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNV9_CUCSA	2.9e-93	90.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152970 PE=3 SV=1	[more]
W9QPJ6_9ROSA	2.1e-88	86.01	Ubiquitin-conjugating enzyme E2 5 OS=Morus notabilis GN=L484_024253 PE=3 SV=1	[more]
A5AU32_VITVI	1.4e-87	85.49	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00070 PE=3 SV=...	[more]
A5B1R0_VITVI	1.8e-87	86.08	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02280 PE=3 SV=...	[more]
B9RCE6_RICCO	2.0e-86	82.90	Ubiquitin-conjugating enzyme h, putative OS=Ricinus communis GN=RCOM_1687380 PE=...	[more]

BLAST of CmoCh15G013020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41340.1	2.3e-81	79.03	ubiquitin conjugating enzyme 4	[more]
AT1G63800.1	6.2e-79	74.75	ubiquitin-conjugating enzyme 5	[more]
AT2G46030.1	1.7e-73	68.39	ubiquitin-conjugating enzyme 6	[more]
AT1G16890.3	1.8e-17	33.33	ubiquitin-conjugating enzyme 36	[more]
AT5G62540.1	1.1e-16	29.38	ubiquitin-conjugating enzyme 3	[more]

BLAST of CmoCh15G013020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452296\|ref\|XP_004143895.1\|	4.1e-93	90.67	PREDICTED: ubiquitin-conjugating enzyme E2 4 [Cucumis sativus]	[more]
gi\|703071635\|ref\|XP_010089080.1\|	3.1e-88	86.01	Ubiquitin-conjugating enzyme E2 5 [Morus notabilis]	[more]
gi\|225426200\|ref\|XP_002279927.1\|	2.0e-87	85.49	PREDICTED: ubiquitin-conjugating enzyme E2 4 isoform X1 [Vitis vinifera]	[more]
gi\|225454282\|ref\|XP_002276343.1\|	2.6e-87	86.08	PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa [Vitis vinifera]	[more]
gi\|1009156149\|ref\|XP_015896092.1\|	3.4e-87	83.94	PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G013020.1	CmoCh15G013020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 10..153 score: 9.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 26..148 score: 31
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 10..181 score: 7.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 4..159 score: 2.62
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 73..89 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..194 score: 3.5E
None	No IPR available	PANTHER	PTHR24067:SF156	SUBFAMILY NOT NAMED	coord: 1..194 score: 3.5E
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..159 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G013020	Cucsa.258470	Cucumber (Gy14) v1	cgycmoB0701
CmoCh15G013020	Cucsa.303300	Cucumber (Gy14) v1	cgycmoB0824
CmoCh15G013020	CmaCh15G012380	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G013020	CmaCh02G014390	Cucurbita maxima (Rimu)	cmacmoB583
CmoCh15G013020	Cla011432	Watermelon (97103) v1	cmowmB267
CmoCh15G013020	Cla021228	Watermelon (97103) v1	cmowmB261
CmoCh15G013020	Csa3G121800	Cucumber (Chinese Long) v2	cmocuB275
CmoCh15G013020	Csa5G152970	Cucumber (Chinese Long) v2	cmocuB286
CmoCh15G013020	MELO3C005691	Melon (DHL92) v3.5.1	cmomeB238
CmoCh15G013020	MELO3C006100	Melon (DHL92) v3.5.1	cmomeB271
CmoCh15G013020	ClCG01G002550	Watermelon (Charleston Gray)	cmowcgB247
CmoCh15G013020	ClCG05G001440	Watermelon (Charleston Gray)	cmowcgB257
CmoCh15G013020	CSPI03G08690	Wild cucumber (PI 183967)	cmocpiB282
CmoCh15G013020	CSPI05G05260	Wild cucumber (PI 183967)	cmocpiB295
CmoCh15G013020	Lsi09G002410	Bottle gourd (USVL1VR-Ls)	cmolsiB255
CmoCh15G013020	Lsi05G020490	Bottle gourd (USVL1VR-Ls)	cmolsiB276
CmoCh15G013020	Cp4.1LG13g01400	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G013020	Cp4.1LG05g03280	Cucurbita pepo (Zucchini)	cmocpeB292
CmoCh15G013020	MELO3C005691.2	Melon (DHL92) v3.6.1	cmomedB270
CmoCh15G013020	CsaV3_5G002660	Cucumber (Chinese Long) v3	cmocucB0347
CmoCh15G013020	CsaV3_3G008830	Cucumber (Chinese Long) v3	cmocucB0330
CmoCh15G013020	Cla97C01G002610	Watermelon (97103) v2	cmowmbB270
CmoCh15G013020	Cla97C05G081800	Watermelon (97103) v2	cmowmbB291
CmoCh15G013020	Bhi12G000266	Wax gourd	cmowgoB0358
CmoCh15G013020	CsGy5G002530	Cucumber (Gy14) v2	cgybcmoB583
CmoCh15G013020	CsGy3G008770	Cucumber (Gy14) v2	cgybcmoB299
CmoCh15G013020	Carg16627	Silver-seed gourd	carcmoB1252
CmoCh15G013020	Carg02541	Silver-seed gourd	carcmoB1230

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G013020	CmoCh02G014730	Cucurbita moschata (Rifu)	cmocmoB250

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G013020	Cucurbita moschata (Rifu)	cmocmoB240
CmoCh15G013020	Cucurbita moschata (Rifu)	cmocmoB273
CmoCh15G013020	Cucumber (Gy14) v1	cgycmoB0367
CmoCh15G013020	Wild cucumber (PI 183967)	cmocpiB310
CmoCh15G013020	Cucumber (Chinese Long) v2	cmocuB301
CmoCh15G013020	Melon (DHL92) v3.5.1	cmomeB255
CmoCh15G013020	Watermelon (Charleston Gray)	cmowcgB259
CmoCh15G013020	Bottle gourd (USVL1VR-Ls)	cmolsiB254
CmoCh15G013020	Cucumber (Gy14) v2	cgybcmoB726
CmoCh15G013020	Melon (DHL92) v3.6.1	cmomedB291
CmoCh15G013020	Cucumber (Chinese Long) v3	cmocucB0363
CmoCh15G013020	Watermelon (97103) v2	cmowmbB295