CmoCh15G011300 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G011300
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pectin lyase-like superfamily protein
Location	Cmo_Chr15 : 7852838 .. 7853741 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTATTATTATTTATTTTTAATTTGGTTCGATGGAAACTCAGAAATGTGATTATCCAAAGGCTCACAATCCTGGCTCCAGTCACCGAACCTAACACGGACGGAATCAATCCAGGTTTCCTTCTTCTTTACCTTCAAAACGTTAGGGTTCTTTATTTCGTCAGTCCCTCTCCCTAATTCTCCATTCAATTTATCAGATTCCTGTTCCAACACTCGAATCGAAGACTGCTACATTGTCTCCGGTGACGATTGCATTGCCATCAAGAGCGGGTGGAACCAATACGGTATCAAGTTCGGAATGCCAACCGAGGACCTCGTCATTCGCCGCGTCACTTGTACTTCACCAAATTCCACAGCTATCGCCCTTGGTAGCGAAATGTCTGGCGGAATCCGCAATGTCAGGATCGAAAACATCGCTGTAATCAACACACAGGCTGCCGTCAGAATCAAAACTGCTCGCGGACGAGGTGGTTTCATCAAGGACATTTTCGTTCGAAGAATGTTTCTAACCAGGATGAAGTACATCTTTTGGATGACTGGAGACTATAAAGCTCATGCAGATGACAAGTTCGATCCCTCAGCATTGCCAGTGATTAAGAACATTAATTACAAAGAGTTGGTGGCCATGAATGTTAGTATGTCAGCAAATTTGGCTGGAATTTCAGGAGATCCGTTTACAGATATATGTATTTCGAATGTGAAGATTGAATTGTCGGCGACGCCTAAAAAGTTGCAGTGGAACTGTACGAACATTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATGTGCTCCGCTGGCTAAGGCAGCAAAAAGAGGTGGATGTGACTTTCCTGAGGATCAGCTGCCGATTGAGAAGGTTCAATTGAAGTCATGTTCTCTTGAAATTCCTGTCTTCTAG

mRNA sequence

ATGATTTTATTATTATTTATTTTTAATTTGGTTCGATGGAAACTCAGAAATGTGATTATCCAAAGGCTCACAATCCTGGCTCCAGTCACCGAACCTAACACGGACGGAATCAATCCAGTCCCTCTCCCTAATTCTCCATTCAATTTATCAGATTCCTGTTCCAACACTCGAATCGAAGACTGCTACATTGTCTCCGGTGACGATTGCATTGCCATCAAGAGCGGGTGGAACCAATACGGTATCAAGTTCGGAATGCCAACCGAGGACCTCGTCATTCGCCGCGTCACTTGTACTTCACCAAATTCCACAGCTATCGCCCTTGGTAGCGAAATGTCTGGCGGAATCCGCAATGTCAGGATCGAAAACATCGCTGTAATCAACACACAGGCTGCCGTCAGAATCAAAACTGCTCGCGGACGAGGTGGTTTCATCAAGGACATTTTCGTTCGAAGAATGTTTCTAACCAGGATGAAGTACATCTTTTGGATGACTGGAGACTATAAAGCTCATGCAGATGACAAGTTCGATCCCTCAGCATTGCCAGTGATTAAGAACATTAATTACAAAGAGTTGGTGGCCATGAATGTTAGTATGTCAGCAAATTTGGCTGGAATTTCAGGAGATCCGTTTACAGATATATGTATTTCGAATGTGAAGATTGAATTGTCGGCGACGCCTAAAAAGTTGCAGTGGAACTGTACGAACATTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATGTGCTCCGCTGGCTAAGGCAGCAAAAAGAGGTGGATGTGACTTTCCTGAGGATCAGCTGCCGATTGAGAAGGTTCAATTGAAGTCATGTTCTCTTGAAATTCCTGTCTTCTAG

Coding sequence (CDS)

ATGATTTTATTATTATTTATTTTTAATTTGGTTCGATGGAAACTCAGAAATGTGATTATCCAAAGGCTCACAATCCTGGCTCCAGTCACCGAACCTAACACGGACGGAATCAATCCAGTCCCTCTCCCTAATTCTCCATTCAATTTATCAGATTCCTGTTCCAACACTCGAATCGAAGACTGCTACATTGTCTCCGGTGACGATTGCATTGCCATCAAGAGCGGGTGGAACCAATACGGTATCAAGTTCGGAATGCCAACCGAGGACCTCGTCATTCGCCGCGTCACTTGTACTTCACCAAATTCCACAGCTATCGCCCTTGGTAGCGAAATGTCTGGCGGAATCCGCAATGTCAGGATCGAAAACATCGCTGTAATCAACACACAGGCTGCCGTCAGAATCAAAACTGCTCGCGGACGAGGTGGTTTCATCAAGGACATTTTCGTTCGAAGAATGTTTCTAACCAGGATGAAGTACATCTTTTGGATGACTGGAGACTATAAAGCTCATGCAGATGACAAGTTCGATCCCTCAGCATTGCCAGTGATTAAGAACATTAATTACAAAGAGTTGGTGGCCATGAATGTTAGTATGTCAGCAAATTTGGCTGGAATTTCAGGAGATCCGTTTACAGATATATGTATTTCGAATGTGAAGATTGAATTGTCGGCGACGCCTAAAAAGTTGCAGTGGAACTGTACGAACATTGAGGGATTTAGTAGCGATGTGGATCCGCCGCCATGTGCTCCGCTGGCTAAGGCAGCAAAAAGAGGTGGATGTGACTTTCCTGAGGATCAGCTGCCGATTGAGAAGGTTCAATTGAAGTCATGTTCTCTTGAAATTCCTGTCTTCTAG

Homology

[Close]

BLAST of CmoCh15G011300 vs. Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-89
Identity = 161/284 (56.69%), Postives = 205/284 (72.18%), Query Frame = 1


Query: 5   LFIFNLVRWKL-----RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIE 64
           L + N   W +     RN++IQ +TILAPV  PNTDGINP           DSC+NTRIE
Sbjct: 215 LTLLNSPSWNVHPVYSRNILIQGITILAPVRSPNTDGINP-----------DSCTNTRIE 274

Query: 65  DCYIVSGDDCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVR 124
           DCYIVSGDDC+A+KSGW++YGI +GMPT+ LVIRR+TC SP S  IALGSEMSGGI++VR
Sbjct: 275 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVIALGSEMSGGIQDVR 334

Query: 125 IENIAVINTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSA 184
            E+I  IN+++ +RIKT  GRGG++KDI+VR M +  MK+ FWMTG+Y +HAD+ +DP A
Sbjct: 335 AEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKA 394

Query: 185 LPVIKNINYKELVAMNVSMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGF 244
            PVI+ INY+++VA NVSM+A L GI  DPFT ICISNV I L+A  KK+ W CT++EG 
Sbjct: 395 FPVIQGINYRDMVAENVSMAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGI 454

Query: 245 SSDVDPPPCAPLAKAA--KRGGCDFPEDQLPIEKVQLKSCSLEI 282
           SS V P PC+ L      K   C+FP + LPI+ V+L+ CS  I
Sbjct: 455 SSGVTPTPCSTLPDQGPEKTSLCNFPAESLPIDTVELQKCSYGI 487

[Close]

BLAST of CmoCh15G011300 vs. Swiss-Prot
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.3e-14
Identity = 55/161 (34.16%), Postives = 75/161 (46.58%), Query Frame = 1


Query: 24  TILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWNQYGIKF 83
           TI+AP   PNTDG NP           +SC N  I       GDDCIA+K+G      K 
Sbjct: 62  TIIAPHDSPNTDGFNP-----------ESCRNVMISGVRFSVGDDCIAVKAG------KR 121

Query: 84  GMPTEDL-------VIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 143
           G   ED        +  R     P    + +GSEMSGG+ +V +E+  +I T   +R+KT
Sbjct: 122 GPDGEDDHLAETRGITVRHCLMQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKT 181

Query: 144 -ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFD 177
            AR  GG + +I +RR+ L  ++        Y   AD   D
Sbjct: 182 GARSGGGMVGNITMRRVLLDGVQTALSANAHYHCDADGHDD 205

[Close]

BLAST of CmoCh15G011300 vs. Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 67/237 (28.27%), Postives = 102/237 (43.04%), Query Frame = 1


Query: 18  VIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGWN 77
           V I  L I AP + PNTDGI+             + SN  I+DC I +GDDCIAI SG  
Sbjct: 172 VTISSLRINAPESSPNTDGIDV-----------GASSNVVIQDCIIATGDDCIAINSG-- 231

Query: 78  QYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSE-MSGGIRNVRIENIAVINTQAAVRIK 137
                    T ++ I  + C   +  +I +LG +  +  + NV ++N     T    RIK
Sbjct: 232 ---------TSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTMNGARIK 291

Query: 138 TARGRGGFIKDIFVRRMFLTRMKY-----IFWMTGDYKAHADDKFDPSALPVIKNINYKE 197
           T +G  G+ + I    + L  ++       F+  GD     D K   SA+ V K +    
Sbjct: 292 TWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRK--SSAVEVSKVVFSNF 351

Query: 198 LVAMNVSMSANLAGISGDPFTDICISNVKIEL--SATPKKLQWNCTNIEGFSSDVDP 246
           +         +       P T+I + ++KIE   S + +  Q  C N+ G S+   P
Sbjct: 352 IGTSKSEYGVDFRCSERVPCTEIFLRDMKIETASSGSGQVAQGQCLNVRGASTIAVP 384

[Close]

BLAST of CmoCh15G011300 vs. Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-10
Identity = 61/238 (25.63%), Postives = 103/238 (43.28%), Query Frame = 1


Query: 14  KLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIK 73
           K  NV +  + + AP   PNTDGI+             +  N R+ +  I +GDDCI+I+
Sbjct: 222 KCSNVQVSNVVVTAPADSPNTDGIHIT-----------NTQNIRVSESIIGTGDDCISIE 281

Query: 74  SGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSEMSGG-IRNVRIENIAVINTQAA 133
           SG           ++++ I  +TC   +  +I +LG + S   +  V ++   +  T   
Sbjct: 282 SG-----------SQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNG 341

Query: 134 VRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKEL 193
           VRIKT +G  G   +I  + + +  +K    +  DY   +    + SA+ V KN+ Y+++
Sbjct: 342 VRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQV-KNVVYRDI 401

Query: 194 VAMNVSMSANLAGISGD-PFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPC 249
              + S +A     S + P   I +  V I      K  +  CTN          P C
Sbjct: 402 SGTSASENAITFNCSKNYPCQGIVLDRVNI------KGGKATCTNANVVDKGAVLPQC 430

[Close]

BLAST of CmoCh15G011300 vs. Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09
Identity = 67/247 (27.13%), Postives = 105/247 (42.51%), Query Frame = 1


Query: 8   FNLVRWKLRNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGD 67
           F+LV  +   V IQ L I AP   PNTDGI+             +     IE C I +GD
Sbjct: 207 FHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIF-----------ASKRFHIEKCVIGTGD 266

Query: 68  DCIAIKSGWNQYGIKFGMPTEDLVIRRVTCTSPNSTAI-ALGSEMS-GGIRNVRIENIAV 127
           DCIAI +G           + ++ I+ + C   +  +I +LG + S   + +V +     
Sbjct: 267 DCIAIGTG-----------SSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKF 326

Query: 128 INTQAAVRIKTARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKN 187
           I+TQ  +RIKT +G  G    I    + +   +    +   Y   A    +  +   I+ 
Sbjct: 327 IDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQG 386

Query: 188 INYKELVAMNVSMSA-NLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVD 247
           + YK +   + + +A  L      P T I +SNV ++L+ + K       N  GF S   
Sbjct: 387 VTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLKLT-SGKPASCVDKNARGFYSGRL 430

Query: 248 PPPCAPL 252
            P C  L
Sbjct: 447 IPTCKNL 430

[Close]

BLAST of CmoCh15G011300 vs. TrEMBL
Match: A0A0A0KNF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G140480 PE=3 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.6e-116
Identity = 202/267 (75.66%), Postives = 232/267 (86.89%), Query Frame = 1


Query: 16  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSG 75
           +NVIIQ LTILAP+  PNTDGI+P           DSCSNTRIEDC+IVSGDDCIA+KSG
Sbjct: 224 KNVIIQGLTILAPIDSPNTDGIDP-----------DSCSNTRIEDCFIVSGDDCIAVKSG 283

Query: 76  WNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIK 135
           W+QYGIKFGMPTEDLVI+R+TC SP+S  +ALGSEMSGGIRNVRIEN   INTQ+AVRIK
Sbjct: 284 WDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIK 343

Query: 136 TARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMN 195
           TARGRGGF+KDIFVR M+L+ MKY+FWMTG+YK+H DDKFDP+ALP I NINY+++VA N
Sbjct: 344 TARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAEN 403

Query: 196 VSMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAA 255
           V+ SA L GISGDPFT+ICISNVKI L+ATPKKLQWNCT++EGFSSDV PPPCAPLAKA 
Sbjct: 404 VTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSSDVVPPPCAPLAKAG 463

Query: 256 KRGGCDFPEDQLPIEKVQLKSCSLEIP 283
           K GGCDFPEDQLPIE+VQLK+C ++ P
Sbjct: 464 KSGGCDFPEDQLPIERVQLKTCFVQNP 479

[Close]

BLAST of CmoCh15G011300 vs. TrEMBL
Match: F6H6C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g01110 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 5.9e-95
Identity = 172/262 (65.65%), Postives = 201/262 (76.72%), Query Frame = 1


Query: 17   NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
            NVIIQ LTI+APV  PNTDGINP           DS  N  IEDC+IVSGDDCIA+KSGW
Sbjct: 800  NVIIQWLTIIAPVGSPNTDGINP-----------DSSKNVLIEDCFIVSGDDCIAVKSGW 859

Query: 77   NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
            +QYGIKFGMPTEDL+IRR+TC SP+S  IALGSEMSGGI+NVR ENI  I++++ VRIK+
Sbjct: 860  DQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIKNVRAENITAIDSESGVRIKS 919

Query: 137  ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
              GRGG++KDI+ R M +  MKY+FWMTGDY  H DD +DP ALP I+NINY+++VA NV
Sbjct: 920  GVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWDPKALPKIENINYRDMVAENV 979

Query: 197  SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK 256
            + SA L GISGDPFT ICISNVKI L+  PKKLQWNCTN+EG SS V PP C  L  + K
Sbjct: 980  TYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSKK 1039

Query: 257  RGGCDFPEDQLPIEKVQLKSCS 279
               C FPED+LPIE VQ+K CS
Sbjct: 1040 VFNCPFPEDKLPIEDVQMKICS 1050

[Close]

BLAST of CmoCh15G011300 vs. TrEMBL
Match: V7CRV6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G292300g PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.0e-94
Identity = 167/264 (63.26%), Postives = 210/264 (79.55%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NV++Q +TILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDC+A+KSGW
Sbjct: 212 NVVVQGVTILAPVTSPNTDGINP-----------DSCTNTRIEDCYIVSGDDCVAVKSGW 271

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           ++YGI +GMPT+ LVIRR+TC SP S  IALGSEMSGGI++VR E+I  INT++ VRIKT
Sbjct: 272 DEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINTESGVRIKT 331

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KDI+VRRM +  MK+ FWMTG+Y +HADDK+DP+ALPVI+NINY+++VA NV
Sbjct: 332 AVGRGGYVKDIYVRRMTMKTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENV 391

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK 256
           +M+A L GISGDPFT ICISNV I+L+   KK+ W CT+I+G SSDV P PC  L +  +
Sbjct: 392 TMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIDGISSDVTPAPCNLLPEQGE 451

Query: 257 R--GGCDFPEDQLPIEKVQLKSCS 279
              G C FPE+ LPIE VQ+++C+
Sbjct: 452 ENIGACTFPEESLPIEDVQVQTCT 464

[Close]

BLAST of CmoCh15G011300 vs. TrEMBL
Match: A0A0S3QXL9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G050000 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.7e-94
Identity = 166/264 (62.88%), Postives = 209/264 (79.17%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NV++Q +TILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDC+A+KSGW
Sbjct: 212 NVVVQGVTILAPVTSPNTDGINP-----------DSCTNTRIEDCYIVSGDDCVAVKSGW 271

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           ++YGI +GMPT+ LVIRR+TC SP S  IALGSEMSGGI++VR E+I  IN+++ VRIKT
Sbjct: 272 DEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKT 331

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KDIFVRRM +  MK+ FWMTG+Y +HADDK+DP+ALPVI+NINY+++VA NV
Sbjct: 332 AVGRGGYVKDIFVRRMTMNTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENV 391

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPC--APLAKA 256
           +M+A L GISGDPFT ICISNV I+++   KK+ W CT+I+G SSDV P PC   P    
Sbjct: 392 TMAARLEGISGDPFTGICISNVTIQMAKKAKKVPWTCTDIDGISSDVTPAPCNLLPEQGE 451

Query: 257 AKRGGCDFPEDQLPIEKVQLKSCS 279
            K G C FPE+ LPIE +Q+++C+
Sbjct: 452 EKIGACTFPEESLPIEDIQVQTCT 464

[Close]

BLAST of CmoCh15G011300 vs. TrEMBL
Match: A0A0L9VQG6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g016900 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.7e-94
Identity = 166/264 (62.88%), Postives = 209/264 (79.17%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NV++Q +TILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDC+A+KSGW
Sbjct: 223 NVVVQGVTILAPVTSPNTDGINP-----------DSCTNTRIEDCYIVSGDDCVAVKSGW 282

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           ++YGI +GMPT+ LVIRR+TC SP S  IALGSEMSGGI++VR E+I  IN+++ VRIKT
Sbjct: 283 DEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKT 342

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KDIFVRRM +  MK+ FWMTG+Y +HADDK+DP+ALPVI+NINY+++VA NV
Sbjct: 343 AVGRGGYVKDIFVRRMTMNTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENV 402

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPC--APLAKA 256
           +M+A L GISGDPFT ICISNV I+++   KK+ W CT+I+G SSDV P PC   P    
Sbjct: 403 TMAARLEGISGDPFTGICISNVTIQMAKKAKKVPWTCTDIDGISSDVTPAPCNLLPEQGE 462

Query: 257 AKRGGCDFPEDQLPIEKVQLKSCS 279
            K G C FPE+ LPIE +Q+++C+
Sbjct: 463 EKIGACTFPEESLPIEDIQVQTCT 475

[Close]

BLAST of CmoCh15G011300 vs. TAIR10
Match: AT4G23500.1 (AT4G23500.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 343.2 bits (879), Expect = 1.5e-94
Identity = 164/265 (61.89%), Postives = 205/265 (77.36%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           N+ IQ LTILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDCIA+KSGW
Sbjct: 237 NIYIQGLTILAPVTVPNTDGINP-----------DSCTNTRIEDCYIVSGDDCIAVKSGW 296

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           +QYGI +GMPT+ L+IRR+TC SP+S  IALGSEMSGGI +VR E+I  IN+++ +RIKT
Sbjct: 297 DQYGINYGMPTKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKT 356

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KD++VR M +  MKY+FWMTG Y +H DD +DP ALPVI+NINY+++VA NV
Sbjct: 357 AIGRGGYVKDVYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENV 416

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK 256
           +M A LAGISGD FT ICISNV I LS  PKK+ WNCT++ G++S V P PC  L +  K
Sbjct: 417 TMPAQLAGISGDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPE--K 476

Query: 257 RGG----CDFPEDQLPIEKVQLKSC 278
           + G    C+FPED +PI++V+L+ C
Sbjct: 477 QPGTVVPCNFPEDPIPIDEVKLQRC 488

[Close]

BLAST of CmoCh15G011300 vs. TAIR10
Match: AT3G48950.1 (AT3G48950.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 334.7 bits (857), Expect = 5.5e-92
Identity = 161/266 (60.53%), Postives = 202/266 (75.94%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           +VI++ +T+LAPVT PNTDGINP           DSC+NT IEDCYIVSGDDCIA+KSGW
Sbjct: 215 SVIVKSVTVLAPVTVPNTDGINP-----------DSCTNTLIEDCYIVSGDDCIAVKSGW 274

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           +QYGIKFGMPT+ L IRR+TC SP S  +ALGSEMSGGI++VRIE++ + NT++A+RIKT
Sbjct: 275 DQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKT 334

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRG ++KDI+ RR+ +  MKY+FWM+G+Y +H D+ FDP ALP I NINY+++ A NV
Sbjct: 335 AVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENV 394

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCA--PLAKA 256
           +MSA+L GI  DPFT ICISNV I L+A  KK+QWNCT++ G +S V P PC+  P  KA
Sbjct: 395 TMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPEPCSLLPEKKA 454

Query: 257 -AKRGGCDFPEDQLPIEKVQLKSCSL 280
            AK   C FP D +PIE V LK C L
Sbjct: 455 QAKNVDCAFPSDLIPIESVVLKKCFL 469

[Close]

BLAST of CmoCh15G011300 vs. TAIR10
Match: AT2G23900.1 (AT2G23900.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-90
Identity = 155/262 (59.16%), Postives = 193/262 (73.66%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NVI++ +TILAP+  PNTDGINP           DSC+NT IEDCY+VSGDDCIA+KSGW
Sbjct: 226 NVIVKGVTILAPIDSPNTDGINP-----------DSCTNTLIEDCYVVSGDDCIAVKSGW 285

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           +Q+GIK GMPT+ L IRR+TC SP+S  IALGSEMSGGI++VRIE+I ++ TQ+A+RIKT
Sbjct: 286 DQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKT 345

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KDIF RR  +  MKY+FWM+G Y  H    FDP A+PVI NINY+++ A NV
Sbjct: 346 AVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNV 405

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK 256
           +  A L G   DPFT IC+SN+KI+L+A PKKL WNCT+I G SS V P PC+ L +   
Sbjct: 406 TQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSLLPEKGA 465

Query: 257 RGGCDFPEDQLPIEKVQLKSCS 279
              C FP D++PIE V L  CS
Sbjct: 466 PVDCAFPVDKIPIESVVLNKCS 476

[Close]

BLAST of CmoCh15G011300 vs. TAIR10
Match: AT3G61490.1 (AT3G61490.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-90
Identity = 160/273 (58.61%), Postives = 202/273 (73.99%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           N+I++ +TI+APV  PNTDGINP           DSC+NTRIEDCYI+SGDDCIA+KSGW
Sbjct: 214 NIIVKGVTIIAPVKSPNTDGINP-----------DSCTNTRIEDCYIISGDDCIAVKSGW 273

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           ++YGI FGMPT+ LVIRR+TC SP S AIALGSEMSGGI +VR E+I    T++ VRIKT
Sbjct: 274 DEYGISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKT 333

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRG F+K+I+V+ M L  MK++FWMTG+YKAHAD  +DP ALP I  INY+++VA NV
Sbjct: 334 AVGRGAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENV 393

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPL----A 256
           SM+  L GISGDPFT ICISN  I ++A  KK  W C+++EG +S VDP PC  L    +
Sbjct: 394 SMAGRLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQES 453

Query: 257 KAAKR----GGCDFPEDQLPIEKVQLKSCSLEI 282
           +  K+    GGCDFP D L I+ V+LK+CS ++
Sbjct: 454 ETTKKKMIDGGCDFPTDVLEIDNVELKTCSYQM 475

[Close]

BLAST of CmoCh15G011300 vs. TAIR10
Match: AT3G62110.1 (AT3G62110.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-53
Identity = 93/230 (40.43%), Postives = 146/230 (63.48%), Query Frame = 1


Query: 16  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSG 75
           R+V+++ LTILAP+  PNTDG++P           DS +N  IEDCYIV+GDD ++IKSG
Sbjct: 211 RDVVVKNLTILAPLESPNTDGVDP-----------DSSTNVCIEDCYIVTGDDLVSIKSG 270

Query: 76  WNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIK 135
           W++YGI +  P+  + I R+T  + +S+ IA+GSEMSGG+  + I+++ + N+   +RIK
Sbjct: 271 WDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIK 330

Query: 136 TARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMN 195
           T+ GRGG+++++ +  + L  +K     TG Y  H D+K+DP ALP I+ I ++ +    
Sbjct: 331 TSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDG 390

Query: 196 VSMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDP 246
           + ++  L GI GD F +IC  NV + +    KK  W C+N+ G+S  V P
Sbjct: 391 IGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSP 429

[Close]

BLAST of CmoCh15G011300 vs. NCBI nr
Match: gi|778699038|ref|XP_011654644.1| (PREDICTED: probable polygalacturonase [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-116
Identity = 202/267 (75.66%), Postives = 232/267 (86.89%), Query Frame = 1


Query: 16  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSG 75
           +NVIIQ LTILAP+  PNTDGI+P           DSCSNTRIEDC+IVSGDDCIA+KSG
Sbjct: 224 KNVIIQGLTILAPIDSPNTDGIDP-----------DSCSNTRIEDCFIVSGDDCIAVKSG 283

Query: 76  WNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIK 135
           W+QYGIKFGMPTEDLVI+R+TC SP+S  +ALGSEMSGGIRNVRIEN   INTQ+AVRIK
Sbjct: 284 WDQYGIKFGMPTEDLVIKRLTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIK 343

Query: 136 TARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMN 195
           TARGRGGF+KDIFVR M+L+ MKY+FWMTG+YK+H DDKFDP+ALP I NINY+++VA N
Sbjct: 344 TARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAEN 403

Query: 196 VSMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAA 255
           V+ SA L GISGDPFT+ICISNVKI L+ATPKKLQWNCT++EGFSSDV PPPCAPLAKA 
Sbjct: 404 VTYSARLEGISGDPFTNICISNVKIGLTATPKKLQWNCTDVEGFSSDVVPPPCAPLAKAG 463

Query: 256 KRGGCDFPEDQLPIEKVQLKSCSLEIP 283
           K GGCDFPEDQLPIE+VQLK+C ++ P
Sbjct: 464 KSGGCDFPEDQLPIERVQLKTCFVQNP 479

[Close]

BLAST of CmoCh15G011300 vs. NCBI nr
Match: gi|659074299|ref|XP_008437531.1| (PREDICTED: probable polygalacturonase [Cucumis melo])

HSP 1 Score: 421.8 bits (1083), Expect = 9.6e-115
Identity = 201/267 (75.28%), Postives = 230/267 (86.14%), Query Frame = 1


Query: 16  RNVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSG 75
           +NVIIQ LTILAP+  PNTDGI+P           DSCSN RIEDC+IVSGDDCIA+KSG
Sbjct: 222 KNVIIQGLTILAPIDSPNTDGIDP-----------DSCSNIRIEDCFIVSGDDCIAVKSG 281

Query: 76  WNQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIK 135
           W+QYGIKFGMPTEDLVIRR+TC SP+S  IALGSEMSGGIRNVRIEN+  INTQ+AVRIK
Sbjct: 282 WDQYGIKFGMPTEDLVIRRLTCISPDSAGIALGSEMSGGIRNVRIENVTGINTQSAVRIK 341

Query: 136 TARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMN 195
           TARGRGGF+KDIFVR M+L+ MKY+FWMTG+YK+H D+KFDP+ALP I NINY+++VA N
Sbjct: 342 TARGRGGFVKDIFVRGMYLSTMKYVFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAEN 401

Query: 196 VSMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAA 255
           V+ SA L GISGDPFT+ICISNVKI L+A PKKLQWNCT++EG SSDV PPPCAPLAKAA
Sbjct: 402 VTYSARLEGISGDPFTNICISNVKIGLTAKPKKLQWNCTDVEGISSDVVPPPCAPLAKAA 461

Query: 256 KRGGCDFPEDQLPIEKVQLKSCSLEIP 283
           K GGCDFP DQLPIEKVQLK+C ++ P
Sbjct: 462 KSGGCDFPADQLPIEKVQLKTCFVQNP 477

[Close]

BLAST of CmoCh15G011300 vs. NCBI nr
Match: gi|951008481|ref|XP_014509021.1| (PREDICTED: probable polygalacturonase [Vigna radiata var. radiata])

HSP 1 Score: 357.1 bits (915), Expect = 2.9e-95
Identity = 167/264 (63.26%), Postives = 211/264 (79.92%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NV++Q +TILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDC+A+KSGW
Sbjct: 212 NVVVQGVTILAPVTSPNTDGINP-----------DSCTNTRIEDCYIVSGDDCVAVKSGW 271

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           ++YGI +GMPT+ LVIRR+TC SP S  IALGSEMSGGI++VR E+I  IN+++ VRIKT
Sbjct: 272 DEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINSESGVRIKT 331

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KDI+VRRM +  MK+ FWMTG+Y +HADDK+DP+ALPVI+NINY+++VA NV
Sbjct: 332 AVGRGGYVKDIYVRRMTMKTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENV 391

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPC--APLAKA 256
           +M+A L GISGDPFT ICISNV I+++   KK+QW CT+I+G SSDV P PC   P    
Sbjct: 392 TMAARLEGISGDPFTGICISNVTIQMAKKAKKVQWTCTDIDGISSDVTPAPCNLLPEQGE 451

Query: 257 AKRGGCDFPEDQLPIEKVQLKSCS 279
            K GGC FPE+ LPIE +Q+++C+
Sbjct: 452 EKIGGCTFPEESLPIEDIQVQTCT 464

[Close]

BLAST of CmoCh15G011300 vs. NCBI nr
Match: gi|359490609|ref|XP_002273177.2| (PREDICTED: probable polygalacturonase [Vitis vinifera])

HSP 1 Score: 355.5 bits (911), Expect = 8.5e-95
Identity = 172/262 (65.65%), Postives = 201/262 (76.72%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NVIIQ LTI+APV  PNTDGINP           DS  N  IEDC+IVSGDDCIA+KSGW
Sbjct: 214 NVIIQWLTIIAPVGSPNTDGINP-----------DSSKNVLIEDCFIVSGDDCIAVKSGW 273

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           +QYGIKFGMPTEDL+IRR+TC SP+S  IALGSEMSGGI+NVR ENI  I++++ VRIK+
Sbjct: 274 DQYGIKFGMPTEDLIIRRLTCISPDSAVIALGSEMSGGIKNVRAENITAIDSESGVRIKS 333

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
             GRGG++KDI+ R M +  MKY+FWMTGDY  H DD +DP ALP I+NINY+++VA NV
Sbjct: 334 GVGRGGYVKDIYARGMTMKTMKYVFWMTGDYGQHPDDGWDPKALPKIENINYRDMVAENV 393

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK 256
           + SA L GISGDPFT ICISNVKI L+  PKKLQWNCTN+EG SS V PP C  L  + K
Sbjct: 394 TYSARLDGISGDPFTGICISNVKIGLTEKPKKLQWNCTNVEGVSSQVTPPSCDLLHPSKK 453

Query: 257 RGGCDFPEDQLPIEKVQLKSCS 279
              C FPED+LPIE VQ+K CS
Sbjct: 454 VFNCPFPEDKLPIEDVQMKICS 464

[Close]

BLAST of CmoCh15G011300 vs. NCBI nr
Match: gi|593794121|ref|XP_007160099.1| (hypothetical protein PHAVU_002G292300g [Phaseolus vulgaris])

HSP 1 Score: 354.8 bits (909), Expect = 1.4e-94
Identity = 167/264 (63.26%), Postives = 210/264 (79.55%), Query Frame = 1


Query: 17  NVIIQRLTILAPVTEPNTDGINPVPLPNSPFNLSDSCSNTRIEDCYIVSGDDCIAIKSGW 76
           NV++Q +TILAPVT PNTDGINP           DSC+NTRIEDCYIVSGDDC+A+KSGW
Sbjct: 212 NVVVQGVTILAPVTSPNTDGINP-----------DSCTNTRIEDCYIVSGDDCVAVKSGW 271

Query: 77  NQYGIKFGMPTEDLVIRRVTCTSPNSTAIALGSEMSGGIRNVRIENIAVINTQAAVRIKT 136
           ++YGI +GMPT+ LVIRR+TC SP S  IALGSEMSGGI++VR E+I  INT++ VRIKT
Sbjct: 272 DEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINTESGVRIKT 331

Query: 137 ARGRGGFIKDIFVRRMFLTRMKYIFWMTGDYKAHADDKFDPSALPVIKNINYKELVAMNV 196
           A GRGG++KDI+VRRM +  MK+ FWMTG+Y +HADDK+DP+ALPVI+NINY+++VA NV
Sbjct: 332 AVGRGGYVKDIYVRRMTMKTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENV 391

Query: 197 SMSANLAGISGDPFTDICISNVKIELSATPKKLQWNCTNIEGFSSDVDPPPCAPLAKAAK 256
           +M+A L GISGDPFT ICISNV I+L+   KK+ W CT+I+G SSDV P PC  L +  +
Sbjct: 392 TMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIDGISSDVTPAPCNLLPEQGE 451

Query: 257 R--GGCDFPEDQLPIEKVQLKSCS 279
              G C FPE+ LPIE VQ+++C+
Sbjct: 452 ENIGACTFPEESLPIEDVQVQTCT 464

The following BLAST results are available for this feature:

BLAST of CmoCh15G011300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_VITVI	1.1e-89	56.69	Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1	[more]
PGLR_RHIRD	4.3e-14	34.16	Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1	[more]
PGLR3_ARATH	1.7e-10	28.27	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 S...	[more]
ADPG2_ARATH	2.9e-10	25.63	Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2	[more]
PGLR2_CHAOB	1.4e-09	27.13	Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1	[more]

BLAST of CmoCh15G011300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNF9_CUCSA	1.6e-116	75.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G140480 PE=3 SV=1	[more]
F6H6C6_VITVI	5.9e-95	65.65	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g01110 PE=3 SV=...	[more]
V7CRV6_PHAVU	1.0e-94	63.26	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G292300g PE=3 SV=1	[more]
A0A0S3QXL9_PHAAN	1.7e-94	62.88	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G050000 PE=...	[more]
A0A0L9VQG6_PHAAN	1.7e-94	62.88	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g016900 PE=3 SV=1	[more]

BLAST of CmoCh15G011300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23500.1	1.5e-94	61.89	Pectin lyase-like superfamily protein	[more]
AT3G48950.1	5.5e-92	60.53	Pectin lyase-like superfamily protein	[more]
AT2G23900.1	1.0e-90	59.16	Pectin lyase-like superfamily protein	[more]
AT3G61490.1	1.8e-90	58.61	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	2.2e-53	40.43	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh15G011300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699038\|ref\|XP_011654644.1\|	2.3e-116	75.66	PREDICTED: probable polygalacturonase [Cucumis sativus]	[more]
gi\|659074299\|ref\|XP_008437531.1\|	9.6e-115	75.28	PREDICTED: probable polygalacturonase [Cucumis melo]	[more]
gi\|951008481\|ref\|XP_014509021.1\|	2.9e-95	63.26	PREDICTED: probable polygalacturonase [Vigna radiata var. radiata]	[more]
gi\|359490609\|ref\|XP_002273177.2\|	8.5e-95	65.65	PREDICTED: probable polygalacturonase [Vitis vinifera]	[more]
gi\|593794121\|ref\|XP_007160099.1\|	1.4e-94	63.26	hypothetical protein PHAVU_002G292300g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G011300.1	CmoCh15G011300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 16..237 score: 2.7
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 53..74 score: 8.6coord: 87..109 score: 3900.0coord: 115..136 score: 6
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 15..268 score: 7.61
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 14..239 score: 6.1
None	No IPR available	PANTHER	PTHR31339	FAMILY NOT NAMED	coord: 16..280 score: 5.8E
None	No IPR available	PANTHER	PTHR31339:SF7	POLYGALACTURONASE-RELATED	coord: 16..280 score: 5.8E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G011300	Melon (DHL92) v3.6.1	cmomedB278
CmoCh15G011300	Melon (DHL92) v3.6.1	cmomedB308
CmoCh15G011300	Silver-seed gourd	carcmoB0964
CmoCh15G011300	Silver-seed gourd	carcmoB1325
CmoCh15G011300	Cucumber (Chinese Long) v3	cmocucB0338
CmoCh15G011300	Watermelon (97103) v2	cmowmbB266
CmoCh15G011300	Wax gourd	cmowgoB0361
CmoCh15G011300	Cucurbita moschata (Rifu)	cmocmoB236
CmoCh15G011300	Cucurbita moschata (Rifu)	cmocmoB243
CmoCh15G011300	Cucurbita moschata (Rifu)	cmocmoB251
CmoCh15G011300	Cucumber (Gy14) v1	cgycmoB0561
CmoCh15G011300	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G011300	Cucurbita maxima (Rimu)	cmacmoB403
CmoCh15G011300	Cucurbita maxima (Rimu)	cmacmoB584
CmoCh15G011300	Wild cucumber (PI 183967)	cmocpiB288
CmoCh15G011300	Cucumber (Chinese Long) v2	cmocuB279
CmoCh15G011300	Melon (DHL92) v3.5.1	cmomeB246
CmoCh15G011300	Watermelon (Charleston Gray)	cmowcgB243
CmoCh15G011300	Watermelon (Charleston Gray)	cmowcgB256
CmoCh15G011300	Watermelon (97103) v1	cmowmB260
CmoCh15G011300	Watermelon (97103) v1	cmowmB262
CmoCh15G011300	Cucurbita pepo (Zucchini)	cmocpeB270
CmoCh15G011300	Cucurbita pepo (Zucchini)	cmocpeB264
CmoCh15G011300	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G011300	Cucurbita pepo (Zucchini)	cmocpeB293
CmoCh15G011300	Bottle gourd (USVL1VR-Ls)	cmolsiB249
CmoCh15G011300	Cucumber (Gy14) v2	cgybcmoB463
CmoCh15G011300	Cucumber (Gy14) v2	cgybcmoB575