CmoCh15G011220 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G011220
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionHeavy metal transport/detoxification superfamily protein
LocationCmo_Chr15 : 7801113 .. 7801784 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCCTACCTCTCTCTCCATCCTCCATCTTCTTCCTTCAAACACTTCATTATCTCTCATTCTAAGCTTTCCCAACAACAAAAATGGCGGTAAGAACAAAGAATCAATTCATTTCCCATCTTCCATTTCTTCTTTTCCAAGCTTTTTCAAGTACTAACAATTTATGGGTCACTTTTTAATCCACAGAAAGTGGTGCTCAAAGTGGAAATAAGCGATTCAAAGACAAAGAAGAAGGTTTTGAGTGCGGTTTCTGGGCTTTCAGGTACTCAACATAGTAGAAACAAGCTTGTTCTTTCATATATGGTTGATATACTCATGTGGGGTTTGGCTAAAACTTGCAGGCATTGTGTCGATGGCGACCGACGCGAAGGAGAACAAAATTACAGTGATTGGAACCGCCGACCCGATTGAGATTGTTAAGAAGGTAAGAAAGATTTGGCCCTCCGCTTACATTATCAGCGTTGGGCCAGAGAAAGAAGAACCGAAGAAAGTAGAGCCGAAGAAACAAGATCCGCCGACACCCAAAATTGAGCCGATTGATTGGGCTAAGGCTTACACTGCCTTGCAGTCTTACCCCACGCCTCATTATTATTATTCATGTCAAGAACAATACAATCCAAATGCTTGTGTTATCTCTTGAATCCATTAGATATATGAAGGATTGTTTTCGAAC

mRNA sequence

CTCCCTACCTCTCTCTCCATCCTCCATCTTCTTCCTTCAAACACTTCATTATCTCTCATTCTAAGCTTTCCCAACAACAAAAATGGCGAAAGTGGTGCTCAAAGTGGAAATAAGCGATTCAAAGACAAAGAAGAAGGTTTTGAGTGCGGTTTCTGGGCTTTCAGGCATTGTGTCGATGGCGACCGACGCGAAGGAGAACAAAATTACAGTGATTGGAACCGCCGACCCGATTGAGATTGTTAAGAAGGTAAGAAAGATTTGGCCCTCCGCTTACATTATCAGCGTTGGGCCAGAGAAAGAAGAACCGAAGAAAGTAGAGCCGAAGAAACAAGATCCGCCGACACCCAAAATTGAGCCGATTGATTGGGCTAAGGCTTACACTGCCTTGCAGTCTTACCCCACGCCTCATTATTATTATTCATGTCAAGAACAATACAATCCAAATGCTTGTGTTATCTCTTGAATCCATTAGATATATGAAGGATTGTTTTCGAAC

Coding sequence (CDS)

ATGGCGAAAGTGGTGCTCAAAGTGGAAATAAGCGATTCAAAGACAAAGAAGAAGGTTTTGAGTGCGGTTTCTGGGCTTTCAGGCATTGTGTCGATGGCGACCGACGCGAAGGAGAACAAAATTACAGTGATTGGAACCGCCGACCCGATTGAGATTGTTAAGAAGGTAAGAAAGATTTGGCCCTCCGCTTACATTATCAGCGTTGGGCCAGAGAAAGAAGAACCGAAGAAAGTAGAGCCGAAGAAACAAGATCCGCCGACACCCAAAATTGAGCCGATTGATTGGGCTAAGGCTTACACTGCCTTGCAGTCTTACCCCACGCCTCATTATTATTATTCATGTCAAGAACAATACAATCCAAATGCTTGTGTTATCTCTTGA
Homology
[Close]
BLAST of CmoCh15G011220 vs. TrEMBL
Match: A0A0A0KNU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152270 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-27
Identity = 74/107 (69.16%), Postives = 80/107 (74.77%), Query Frame = 1 

Query: 12  DSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIWPSAYIISVGPE 71
           D KTKKKVL AVSGL G+VSMA  A+ENKITVIGT DPI+IVKKVRK+WP A IISVG E
Sbjct: 3   DLKTKKKVLGAVSGLLGVVSMA--AEENKITVIGTTDPIKIVKKVRKVWPCANIISVGQE 62

Query: 72  KEEPKKVEPKKQDPPTPKIEPIDWAKAYTALQSYPTPHYYYSCQEQY 119
           KE+ KK E +      PKIE IDW KAYT   SYPT HYYY  QE Y
Sbjct: 63  KEDAKKEESQ------PKIEQIDWDKAYTTFYSYPTTHYYYPYQEPY 101

[Close]
BLAST of CmoCh15G011220 vs. TrEMBL
Match: C6TB20_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G032400 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.0e-20
Identity = 68/154 (44.16%), Postives = 86/154 (55.84%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M K VLK+++ D K K+K L  VS LSGI ++A D KE K+TVIGT DP+ +V K+RK W
Sbjct: 1   MKKFVLKLDLHDDKDKQKALKTVSTLSGIDAIAMDMKEKKLTVIGTVDPVTVVSKLRKNW 60

Query: 61  PSAYIISVGP-----EKEEPKKVEPKKQ------------------------DPPTPKIE 120
             A I++VGP     +KE+PKKVE KK+                        DPP     
Sbjct: 61  -KADIVAVGPVKEPEKKEDPKKVEAKKEGEKKEEGKKEEGKKEEKKEDEKKKDPPPVPDP 120

Query: 121 PIDWAKAYTALQSYPTPHYYYSCQEQYNPNACVI 126
            ++W KAY A   Y T HYY    E+ NPNACVI
Sbjct: 121 VLEWVKAYRAYNPYMTTHYYAPSMEE-NPNACVI 152

[Close]
BLAST of CmoCh15G011220 vs. TrEMBL
Match: A0A0B2QFV6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_045333 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.0e-20
Identity = 68/154 (44.16%), Postives = 86/154 (55.84%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M K VLK+++ D K K+K L  VS LSGI ++A D KE K+TVIGT DP+ +V K+RK W
Sbjct: 1   MKKFVLKLDLHDDKDKQKALKTVSTLSGIDAIAMDMKEKKLTVIGTVDPVTVVSKLRKNW 60

Query: 61  PSAYIISVGP-----EKEEPKKVEPKKQ------------------------DPPTPKIE 120
             A I++VGP     +KE+PKKVE KK+                        DPP     
Sbjct: 61  -KADIVAVGPVKEPEKKEDPKKVEAKKEGEKKEEGKKEEGKKEEKKEDEKKKDPPPVPDP 120

Query: 121 PIDWAKAYTALQSYPTPHYYYSCQEQYNPNACVI 126
            ++W KAY A   Y T HYY    E+ NPNACVI
Sbjct: 121 VLEWVKAYRAYNPYMTTHYYAPSMEE-NPNACVI 152

[Close]
BLAST of CmoCh15G011220 vs. TrEMBL
Match: A0A0A0KK61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152250 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M KVV+K+++ D K K+K L +VSGL GI S+A D K+ K+TVIG  DP+++  KVRK W
Sbjct: 1   MRKVVVKLDLHDDKGKQKALKSVSGLQGIESIAMDMKDKKLTVIGDVDPVDVADKVRKHW 60

Query: 61  PSAYIISVGPEKEE---PKKVEPKKQDPPTPKIEP-IDWAKAYTALQSYPTPHY-YYSCQ 120
           P+A IISVGP KEE   P KV   K+   + KIE  ++W K++  +Q Y  P+Y  Y  +
Sbjct: 61  PNADIISVGPAKEEKAAPPKVTKPKEKSESEKIEDLLNWYKSHGHIQ-YGAPNYRVYGIE 120

Query: 121 EQYNPNACVIS 127
           E  NPN+CVIS
Sbjct: 121 E--NPNSCVIS 128

[Close]
BLAST of CmoCh15G011220 vs. TrEMBL
Match: M5X130_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013273mg PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-19
Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M KVVLK+E+ D K KKK + AVSGL G+ S++ D K+ K+TV G  DP+ +V K+RK+ 
Sbjct: 1   MKKVVLKLELYDEKVKKKAMRAVSGLEGLDSISMDMKDKKLTVTGDIDPVNLVSKLRKLC 60

Query: 61  PSAYIISVGPEKEEPKKVEPKKQDP-------PTPKIEPIDWAKAYTALQSYPTPHYYYS 120
            +  I+SVGP KEE KK EPKK DP         PK E  +  KAY A    P P YYY 
Sbjct: 61  HTD-IVSVGPAKEEKKKEEPKKDDPKKGDEKKKDPKDEMAELIKAYQA-HYPPMPAYYYV 120

Query: 121 CQEQYNPNACVIS 127
             ++ +PN+C+IS
Sbjct: 121 RSQEEDPNSCIIS 131

[Close]
BLAST of CmoCh15G011220 vs. TAIR10
Match: AT1G01490.1 (AT1G01490.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 2.2e-16
Identity = 65/177 (36.72%), Postives = 83/177 (46.89%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M K+VLK+++ D + K+K L  VS L GI S+A D KE K+TVIGT DP+ +V K+RK W
Sbjct: 1   MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 60

Query: 61  PSAYIISVGP--EKEEPKKVEPKKQ---DPP----------------TPKIEPIDW---- 120
           P   I+ VGP  E E+ KK EPKK+   +PP                 PK E        
Sbjct: 61  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEKKEGGD 120

Query: 121 ---------------------------AKAYTALQSYPTPHYYYSCQEQYNPNACVI 126
                                       KAY A   + T +YY    E+ NPNACVI
Sbjct: 121 KKEGEKKDQPQAQPQPVVPPPDHVLELVKAYKAYNPHLTTYYYAQSIEE-NPNACVI 176

[Close]
BLAST of CmoCh15G011220 vs. TAIR10
Match: AT5G52740.1 (AT5G52740.1 Copper transport protein family)

HSP 1 Score: 71.2 bits (173), Expect = 5.0e-13
Identity = 55/128 (42.97%), Postives = 73/128 (57.03%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M  VVLK+++   KTK+K +S V  LSG+ S+  + K+ K+TV G  D   IVKK++KI 
Sbjct: 1   MQVVVLKLDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 60

Query: 61  PSAYIISVGPEKEEPKKVEPKKQDPPTPKIEPIDWAKAYTALQSYPTPHYYYSCQEQYN- 120
            + + ISVGP KE  KK   K  DP  P+ +P D    Y      P P YY++    YN 
Sbjct: 61  HTEF-ISVGPVKEPEKK---KPDDPKKPETKPPDVIYHYVP----PCPPYYHNFNGCYNE 118

Query: 121 -PNACVIS 127
            PNACV S
Sbjct: 121 DPNACVTS 118

[Close]
BLAST of CmoCh15G011220 vs. TAIR10
Match: AT5G23760.1 (AT5G23760.1 Copper transport protein family)

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-10
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 3  KVVLKV-EISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIWP 62
          KVVLKV  ++D KTK+K + A + + G+ S+A D K+ K+TVIG  D + +VKK++K+  
Sbjct: 4  KVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKKV-G 63

Query: 63 SAYIISVGPEKEEPK--KVEPKKQDPPTPKIE 92
             +ISVGP KEE K  K E KK++    K E
Sbjct: 64 KVDLISVGPAKEEKKEEKKEEKKEEKKEEKKE 94

[Close]
BLAST of CmoCh15G011220 vs. TAIR10
Match: AT5G26690.1 (AT5G26690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08
Identity = 31/83 (37.35%), Postives = 54/83 (65.06%), Query Frame = 1 

Query: 3  KVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIWPS 62
          K+ +KV+I   K K  ++ AV+ L G+  ++ D +++ +TV+GT DP+ + ++++KI   
Sbjct: 5  KIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKKINKK 64

Query: 63 AYIISVGPEKEEPKKVEPKKQDP 86
            +ISVGP K+   K +PKK DP
Sbjct: 65 PVVISVGPPKKPDPKPDPKK-DP 86

[Close]
BLAST of CmoCh15G011220 vs. TAIR10
Match: AT3G05920.1 (AT3G05920.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 1 

Query: 3  KVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIWPS 62
          KV +KV+I+  K    ++ AV+ + G+  ++ D   + +TV+GT DP+ +  +++KI   
Sbjct: 5  KVEIKVDINCGKCNSAIMEAVTEIEGVNHISLDEGNSILTVVGTMDPVCVATRLKKIKQK 64

Query: 63 AYIISVGP---EKEEPKKVEPKKQDPPTPKIEP 93
            IISVGP     E PK  EP+K  PP P  EP
Sbjct: 65 PVIISVGPPPKPPEPPKPPEPEKPKPP-PAPEP 96

[Close]
BLAST of CmoCh15G011220 vs. NCBI nr
Match: gi|659073933|ref|XP_008437330.1| (PREDICTED: uncharacterized protein LOC103482783 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-31
Identity = 81/117 (69.23%), Postives = 91/117 (77.78%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M KVVL VE+ DSKTKKKVL AVSGL G+VS+AT+  ENKITVIGT DPI+IVKKVRK+W
Sbjct: 1   MMKVVLNVEMRDSKTKKKVLGAVSGLLGVVSVATE--ENKITVIGTTDPIKIVKKVRKVW 60

Query: 61  PSAYIISVGPEKEEPKKVEPKKQDPPTPKIEPIDWAKAYTALQSYPTPHYYYSCQEQ 118
           P+A IISVG EKE+ KK E +      PKIE IDWAKAYT   SYPT HYYY  QE+
Sbjct: 61  PTANIISVGQEKEDAKKEESQ------PKIEQIDWAKAYTTFYSYPTSHYYYPYQER 109

[Close]
BLAST of CmoCh15G011220 vs. NCBI nr
Match: gi|778699503|ref|XP_011654722.1| (PREDICTED: uncharacterized protein LOC105435437 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-30
Identity = 81/118 (68.64%), Postives = 88/118 (74.58%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M KVVL VE+ D KTKKKVL AVSGL G+VSMA  A+ENKITVIGT DPI+IVKKVRK+W
Sbjct: 1   MMKVVLNVEMRDLKTKKKVLGAVSGLLGVVSMA--AEENKITVIGTTDPIKIVKKVRKVW 60

Query: 61  PSAYIISVGPEKEEPKKVEPKKQDPPTPKIEPIDWAKAYTALQSYPTPHYYYSCQEQY 119
           P A IISVG EKE+ KK E +      PKIE IDW KAYT   SYPT HYYY  QE Y
Sbjct: 61  PCANIISVGQEKEDAKKEESQ------PKIEQIDWDKAYTTFYSYPTTHYYYPYQEPY 110

[Close]
BLAST of CmoCh15G011220 vs. NCBI nr
Match: gi|778699506|ref|XP_011654723.1| (PREDICTED: uncharacterized protein LOC105435438 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-29
Identity = 78/116 (67.24%), Postives = 87/116 (75.00%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M KV L VE+ D KTKKKVL A+SGL G+V+MA  A+ENKITVIGTADPI+I KKVRK+W
Sbjct: 1   MMKVELNVEMRDLKTKKKVLGAISGLLGVVAMA--AEENKITVIGTADPIKICKKVRKVW 60

Query: 61  PSAYIISVGPEKEEPKKVEPKKQDPPTPKIEPIDWAKAYTALQSYPTPHYYYSCQE 117
           P A IISVG EKE  KK E  K++   P IE IDWAKAYT   SYPT HYYY  QE
Sbjct: 61  PCANIISVGQEKEAAKK-EVAKKEESQPTIEQIDWAKAYTTFYSYPTSHYYYPYQE 113

[Close]
BLAST of CmoCh15G011220 vs. NCBI nr
Match: gi|700194885|gb|KGN50062.1| (hypothetical protein Csa_5G152270 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 74/107 (69.16%), Postives = 80/107 (74.77%), Query Frame = 1 

Query: 12  DSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIWPSAYIISVGPE 71
           D KTKKKVL AVSGL G+VSMA  A+ENKITVIGT DPI+IVKKVRK+WP A IISVG E
Sbjct: 3   DLKTKKKVLGAVSGLLGVVSMA--AEENKITVIGTTDPIKIVKKVRKVWPCANIISVGQE 62

Query: 72  KEEPKKVEPKKQDPPTPKIEPIDWAKAYTALQSYPTPHYYYSCQEQY 119
           KE+ KK E +      PKIE IDW KAYT   SYPT HYYY  QE Y
Sbjct: 63  KEDAKKEESQ------PKIEQIDWDKAYTTFYSYPTTHYYYPYQEPY 101

[Close]
BLAST of CmoCh15G011220 vs. NCBI nr
Match: gi|720017067|ref|XP_010261350.1| (PREDICTED: FK506-binding protein 4-like [Nelumbo nucifera])

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-21
Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 1 

Query: 1   MAKVVLKVEISDSKTKKKVLSAVSGLSGIVSMATDAKENKITVIGTADPIEIVKKVRKIW 60
           M KVVLK+++ D K K+K + AVS L+GI S+A D KE K+TV+G  DP+++V K+RK+W
Sbjct: 1   MKKVVLKLDLHDDKAKQKAMKAVSSLAGIDSIAMDMKEKKLTVVGDVDPVDVVSKLRKLW 60

Query: 61  PSAYIISVG-----------PEKEEPKKVEPKKQDP-PTPKIEPID-----WAKAYTALQ 120
            +  I+SVG           P+KEEPKK EPKK++P   PK +P++       KAY A  
Sbjct: 61  HTD-IVSVGPAKEPEKKKEEPKKEEPKKEEPKKEEPKKEPKKDPVEQQIQNLVKAYQAYN 120

Query: 121 SYPTPHYYYSCQEQYNPNACVI 126
            + T HYY    E+ NPNACVI
Sbjct: 121 PHMTTHYYVQSVEE-NPNACVI 140

The following BLAST results are available for this feature:
BLAST of CmoCh15G011220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G011220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNU5_CUCSA1.4e-2769.16Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152270 PE=4 SV=1[more]
C6TB20_SOYBN8.0e-2044.16Uncharacterized protein OS=Glycine max GN=GLYMA_16G032400 PE=2 SV=1[more]
A0A0B2QFV6_GLYSO8.0e-2044.16Uncharacterized protein OS=Glycine soja GN=glysoja_045333 PE=4 SV=1[more]
A0A0A0KK61_CUCSA1.4e-1949.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152250 PE=4 SV=1[more]
M5X130_PRUPE1.8e-1948.12Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013273mg PE=4 SV=1[more]
BLAST of CmoCh15G011220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01490.12.2e-1636.72 Heavy metal transport/detoxification superfamily protein [more]
AT5G52740.15.0e-1342.97 Copper transport protein family[more]
AT5G23760.13.0e-1045.65 Copper transport protein family[more]
AT5G26690.12.8e-0837.35 Heavy metal transport/detoxification superfamily protein [more]
AT3G05920.11.4e-0737.63 Heavy metal transport/detoxification superfamily protein [more]
BLAST of CmoCh15G011220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073933|ref|XP_008437330.1|2.9e-3169.23PREDICTED: uncharacterized protein LOC103482783 [Cucumis melo][more]
gi|778699503|ref|XP_011654722.1|2.5e-3068.64PREDICTED: uncharacterized protein LOC105435437 [Cucumis sativus][more]
gi|778699506|ref|XP_011654723.1|8.0e-2967.24PREDICTED: uncharacterized protein LOC105435438 [Cucumis sativus][more]
gi|700194885|gb|KGN50062.1|2.0e-2769.16hypothetical protein Csa_5G152270 [Cucumis sativus][more]
gi|720017067|ref|XP_010261350.1|3.6e-2147.18PREDICTED: FK506-binding protein 4-like [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G011220.1CmoCh15G011220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 8..60
score: 9.
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 3..65
score: 1.9
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 13..59
score: 1.
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 1..125
score: 3.5
NoneNo IPR availablePANTHERPTHR22814:SF77HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEINcoord: 1..125
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G011220CmaCh15G010640Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G011220Carg27019Silver-seed gourdcarcmoB0782
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G011220Cucurbita moschata (Rifu)cmocmoB193
CmoCh15G011220Cucurbita moschata (Rifu)cmocmoB236
CmoCh15G011220Cucurbita moschata (Rifu)cmocmoB243
CmoCh15G011220Cucurbita moschata (Rifu)cmocmoB251
CmoCh15G011220Cucumber (Gy14) v1cgycmoB0600
CmoCh15G011220Cucumber (Gy14) v1cgycmoB0703
CmoCh15G011220Cucurbita maxima (Rimu)cmacmoB319
CmoCh15G011220Cucurbita maxima (Rimu)cmacmoB403
CmoCh15G011220Cucurbita maxima (Rimu)cmacmoB584
CmoCh15G011220Wild cucumber (PI 183967)cmocpiB278
CmoCh15G011220Wild cucumber (PI 183967)cmocpiB288
CmoCh15G011220Cucumber (Chinese Long) v2cmocuB271
CmoCh15G011220Cucumber (Chinese Long) v2cmocuB279
CmoCh15G011220Melon (DHL92) v3.5.1cmomeB246
CmoCh15G011220Watermelon (Charleston Gray)cmowcgB243
CmoCh15G011220Watermelon (Charleston Gray)cmowcgB256
CmoCh15G011220Watermelon (97103) v1cmowmB260
CmoCh15G011220Watermelon (97103) v1cmowmB262
CmoCh15G011220Cucurbita pepo (Zucchini)cmocpeB270
CmoCh15G011220Cucurbita pepo (Zucchini)cmocpeB264
CmoCh15G011220Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G011220Cucurbita pepo (Zucchini)cmocpeB293
CmoCh15G011220Bottle gourd (USVL1VR-Ls)cmolsiB249
CmoCh15G011220Cucumber (Gy14) v2cgybcmoB463
CmoCh15G011220Cucumber (Gy14) v2cgybcmoB575
CmoCh15G011220Melon (DHL92) v3.6.1cmomedB278
CmoCh15G011220Melon (DHL92) v3.6.1cmomedB308
CmoCh15G011220Silver-seed gourdcarcmoB0964
CmoCh15G011220Silver-seed gourdcarcmoB1325
CmoCh15G011220Cucumber (Chinese Long) v3cmocucB0338
CmoCh15G011220Watermelon (97103) v2cmowmbB266
CmoCh15G011220Watermelon (97103) v2cmowmbB289
CmoCh15G011220Wax gourdcmowgoB0361