CmoCh15G010190 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G010190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Mediator of RNA polymerase II transcription subunit 23
Location	Cmo_Chr15 : 5967415 .. 5974598 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTTCGACAGTCCGCTGATTCTGGTTTTAGTTCCTATGCTTTTTCCTGAAACTCCAAGGGTTTGAGCTTTTGGAACTGGAAATGAGAAGATGGATCAACCACAGCGATCGTCATCAGTAACGGCGGTCTCCACTTCCCGCGCTTACCAGTTTCACCCAGCTCGAGCTGCCATTGCCAATCTCTTCGACCTCTACTTGGGAGTAATATCTCAATTGCCCTTCTCCCCTCTTCTTTTTAACTTTCTCCCCTCTGATTTTAAGTTTCTATCTTCGTTTAACAACGTAACAGCATATCCACTATGTTTATTTGTTTGAATTCTGTTTTTTGGGCAGAGGAGTAATCGTCTAAAGCCCGAAGATTCAGCTCGAGAACCTCCGTGAGTGTTTTTCTTTGTTTCCTTGTTCATGTCTTTGTTTTTATGTTAGTTTATGTTTGTTCAAATAGCGTGTATATGTTCTTGTTGGCGTCTTCTCTTGGTTAGTTTGCAATCTCTCTTATTATATCACTCTGGTCCTAGTTCCTTCAACCTGCACCTGGTTAATTTTAGAACTCGGCAAATCAAAATTTTCTGTTTGAGCAGGTAATCATTTGTCTTAATAAAATCCCAACTGATGCCATATTCCTCTTTTGATATGGTCTATGGTCTAATTCCCTCTCGGTGTAAATTGTTTAATATTTTTACTTTCTATAGTTATACCTTCCTCATTGTAAATTGGGAAAGTCTTTTGTAAACGCGATAGATTATACATCCCTTTTGTAAATTTCAATCATCAAAGAAATTGTCTCTTATCGAAAAAAGAAAAAGAAAAAAAAAATTCAAGGTGCATCCAAGTAGGCTCAAGTGCTCATGAATATCACAATTTTTTTTTCTACCATAACATGGCTTACCCATTTTAAGAGTTCACACTGCTTCCGAATATACTAACTATTTAGGCTGTTTTCAAGACTAACCTGCTCAAACAGGGACTATTAAATGAGCTAGCTACATCTAGTTATTACATCATTAGCCAATTTCCTTTTTTTGTTTCAATTTAATTCAATAAGACTTGGAGATTCTCGTTCAACCTTACTTGAATAAAATCTTTACTACAGGTTGTACAAATGCTTTTGAAGTAAACTATGGTACAATACAAAAATGTCTAGGTCTGTTCTTCAATGGCCAAGTCTGTACAAAAATAGGGTTCAATGCGTTTTTTGATGATGAAAAATACTTTGCATACTCTATTCATTTTGCATGATTTAATCCCTAATCCATTGACTGGAAACTTAATTATGGCTTTACCTTTCTGTTTTTTGCTCAATGGAAAAATGCTCTACTTCTTAAAAGAAAGAAAAAAATGCGTTGTTGGCATTGAAGTATGATCTTACGTGCATGCTGGGTTGCAGGTTTCTCATCTTCGCTTTCTTCAACTTGTTTTATTTATTTTATTGTGTTTTTACTCTTAATTGATGTTGTGCCTTCTCACATCGAGTTTCTTGAGATGAGCTGTGATAGGTGATCTTATTTTCATTTTCCAATCTGGTTTTTTATAACGTTCACCGAAGTCCTTAAAAGTTCATTTCTCAATATTTGTCTTGCCATTATTGTTCTATTAAATTGTTTATTGAGATTGAGTGCCATATGCTTTTATGAGAGGATCATTAGATTGGTACAAAGTGTTCCAATCAGTCGTGTGATTGCACAAACTGAATCTTTGAGGATATGATGGTGACAGCTCCTATACTTCATGGATAATTTTTTTAATTTTTCCTAAATCAAATGACTGATTGAAGCCGCATAACTGGGTGCTATTAAGTCCAATATGTAGGTTTAAAGTACAAAGTAATTGCGAGACTCAGGACATTTGACTGATACGTTCATAAATTCTTTTTAATAACCTAATTTTTAGGATAGTGAAATGATTTTTTTTTTCCTGATAGTCAATAATTGAAGTATATACATAGAAAAAAAAAATGCTAAATCAATTAGAAGAAACGAAAATAAATGTTGTTTTAACGACTTTGCTGGATCAATTCTTTATGTGGAACTTTTCTAATCTTAATTTCCATTGCACGTCCTCAGGAACAAGGCCCAAAAGCGTGTAGTAGCTATTAACAGAGAGCTTCCTCCTCGGAACGAGCAGTTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTGCAGTGAGTTTCGAGACCTAATTCAGAATTTCATATTATGATGCGTTTTACAATTTTATTTTCTTCTATTTCACCCAACAATATTTTAACAGTGTTTAACAAATGGGGCAATCTTTCAGGACTATGATCAGTTGCATGCTGTGACTGAATCAGTTCTTATCTCCCTAGTTGTACAGTGCAGTGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGGAGTTTATGCAGTATAGGTTACATTAATTGGGACACTTTTTTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTCCCTGGGCCAGGGAAGTCAAGCTGCGCCTACTACTGTCTCAACTACAAATTTATCGCAGTCTGGGGTGCTTCCATCCTCAAACCCAGTCCCTAACAGTTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCGTTACCATCGGTTCATGGAATCAGTTCACCTGCTCAATCAAGCATCGATCCAACTTCTTGCACAGCATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCATCTGCAGTTAGGGTCAATTCATTTTTGAGAAATAATGCAATAAGCAGTCTACGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATTTGATTTGAAACCAGTGACGCGTGCTGATATTTTTTCCCACATGCTTAATTGGATGGTTAATTGGGATCAACGGCAGCAAGGGATTGAGGAATCAGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGGAGAACAAATGTCGTGTGCCTTTCTATGAATTACTACGCAGTGGCTTGCAATTTATTGATAACATTCCTGATGATGAAGCCTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCAACACCTTCACTGCCCTACATTTGGGACTCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTCGCGTCATTCACCAATCACATATCCAAGTGTACTTGGTGAACCTCTGCATGGAGAGGTGAAGAACTTAATCTAGAGCTTAAAGAGGGTTTCTATTCAATGTCAGTAAAAAAGAGAAACGAAAAATGTATCTTATCTAGCTATTTGAGAGACTTAGAAATAGAAGAAAATGAGAGGAAAACATGCAATCATTTCTCTCCAGTCCAACTGTCAATTTTTACCACTGTAGGTGAGGTTAAATTTGGAAACAATTTAGGTGTATGTTATAAGTTGCGAAGATATTGTAATTATCTATATGCAGTAAAGTCTGCTACTATTTAGCTTCATTATGGAAAAGTGGAACCAATGAGGGGAATTATGAAGTCTCTTTTTAACAATCACCTAAAATCTGTGGTAAAACATTCATTAATTGTGATTATTCTATACTAAGTTTTCTCCTCTTGAACATACTGTATGCCTTCGTCTCTAAATACTTGTTGCAATTTTCATATAGTTACTGGTACAATGCCCTTTCTAATTTGTTCATTTGATTGCCATTCTGTAAATGCTGTTAAACTGGTCTTGTTTATTTGGTTCAGGATATTGCATCAGCTATTCAGAGAGGAACTCGAGACTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACCCCATCACCTGAATGGTGGAAGCGCGTGCTTCTTGTGGCTCCTGGCTATAGGTCTCCTGCACAGGGACTTAGTCCTGGTGCTGTGTTTACATCTGAGATGATATGTGAGGCGACAATTGATAGAATATTTGAGCTATTGAAGCTGACAAATTCAGGCAACTGCAATTTCTTTGTGATTCATCTTTTTATTCTGCCACTTAGTCATGATATTCTTTATGAAAGTAGGTTTCTTATAAAGAAAAAGAAAGGAGTTAATGAGCACTAGTTTAAGTTATTAGCATTAGCACCATTGAAGCTTCTGAGACTTAGTGTGGTGCAACCTCAACTATATTCTTTAAATGAATACTTCAACTGTCTTTTTTAGATGAATATTTTTTTATTGATTTTTTCTGAAAGAGTACAACTAATATCTATGTACTTCGAAGTTTAAAAAATTTCACTCCTATTTGAATTAATTATAGGACTAATAATTGCAGAAGGAACTGGAAAACATATGCATTAAAGATCCATGATTCTTGATAAAGTCGAAAGTGTCTTCCCTGTTTTTATTAACATGTTGATAACCAACCTCCTGTAACTATTGTTTGCAGAGATACATTGCTGGCAAGAGTGGCTCGTCTTCTCCGATATATTCTATTTTCTTATGAAAAGCGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTTTTCTCGTGTAACAGAGGGAGGTCACCATGTCTTAAGGACAAACCATGTCACTTGGCTGTTTGCACAGATCATTCGTGTTGAGCTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTTGATTTTGAATGACGGATTCATTGCCCTTGATATACTCATGTACTCTTGCATTTTCTCATAATTGCTTCTTTCTAAGATGCACTAACTGAAGTGTGAACGTAAAAGTTCCCTAATTATTTTGAGAAGCTTTACATCAATATGTAATACGTTCTGGAGGATTTTTTTGTTGATGCACTAATGTTTCAAATATGTTTCCAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGCTGATCCAAATAATCCTCAAAGCATCTTGCTTGATTTTATTAGTAGTTGTCAGAACTTGCGTATTTGGTCATTGAACACAGCAACAAGAGAATATTTGAATAATGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCAATTAAAGGTACATGGTGCATAATGCAAGTAAAGTTGTTGAGTCATGCTACATATCGTGGTTTTTTTTCTCCTTCTGTTCTATGTTTTTTAGTCACAATTTAAGAAAAATTGGAGCAGCTCTTATATATTTTCCATCTAGTTAGAGAGGTCAACTGATGCTGTATACATTACATATCATAAGAATTACATATCATAAGAAAAACATTAGTTTGCACCAACACTTCCAACTTTTTAGAGATCTTGCTTTGCCATATTGGGGTATTTTCTCCTTGATTTTGTATATTATATTCTTATTATGAAGGTTTGTTTATGTAACAAAATATTTGTATTTTCTGACACGTCTTTGGTATTATCTCCAGGTGATCGTATGATGGATTATATGAACATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATACACCATGGCGCAACCAGCATGTGAAACTGTGATGAATTGGCTATCTTCTGCTGGGGTTCCAGAACTATCATCAGCACAAAATTTACAGACCAATGAGAGGATAATGATAATGCGAGAAGTGAGCCCATTGCCGATGTCTTTATTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGACCTATCAAATGGAAGAATCTTTATTTTCTGGACAGGTATATATCCTTTTCTTAATCAAAATTTGTACTATAGTATATGTGGTCTATTGCACTGAAAGATACCTATGATCACAACTTTCTAGGTACAACTGTAACCATTATGCAATAAAATCTTACTTGCATGGCATTAGGCATTAGGCAAAATGGCATGTTTGACACATGCCTGAAGTGTATTCGAGCATGTATTTGACATATGTCCTTTGGAGAGAGATAAGGAGATCTCAATTTTTAAGGAGGATTTGAATAATTCAAATTCAAATATTATAAAGAAAGATTCCCTTTTAAAATCAAATTTTATCCTTTGGGATGTTGAGATTCAGCCATTGTAAGGGGTTACTCATAATTCAAATTTGAAAGGATTGGAGGATTTGGATTATGATTCTGGAGTCGGCATGAGCAGACTTGAGGGATAAGATCCTTTTATCCCAGAAGATTCAATCTTAAAAGATTCAATCCCAGAAGATTCATAAAATCTTCGTCCTCCTGAAGGCAGCCGAACAATTGATAAAATCTTTCTACCTAGTGAAGGAGGCCGAACAATACAATCTAATAACCAGCCCTCATGAGAGTGACGTTTTTGAATCCTTGATGTTTCAACCATCCCTGTCTTACTTTAAAAATGATGAAAACATAGGGCAATGCAACATCCCCATCTAGCTTTAAAAGTTAGAACTAATTTTAAGATTTATTGTAAGTTCATGGACTAAATTCAACATTTGAAAGTAAAGAGTCTAAAATGGAATTAGAGTCAAAATATAGACTCAAATAATACTTTTCTATGTGTGTGTGTGTGTGTGTATATAAATATATATTATTGTTGGGTTTAGATTCGGCCCCAGAGGAAAAGGAAGAGAAAGGAAAGAGGAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAACTTGAGAAGTATCTAAGTAACTTCAAATTTAAAATATACATACAAATAATTATAGAAAGAAAGGTAACCAGTGGCGCTTACCAGTTTAACAGTGTTTACCATTCAACCCCGTAGGTTTGGGTTTATACTGCTTAAAACCATGCCCCAAGCAATGGGTGGGCTTACCAAGCCAACCCAAGGATCTACTTACAGCTGCCCGGAAGAAAAACGTCGCCGGTCAATACCCCAAACAAGCCCAAAAAGTAGTAGTAGAAAATGGGTTCATGGTCTGAATGGCCTACATAATTCGCTTACTTTTAGGTTAAATATTTGAGTGATTTATTTCTATCCCATGATATAGTATTCTCAGCTGGGTGCATACAATTTATTGTAAGAAGCTCATGATGCTGTACATATTAAGCGCTGTTGCTTGAGTTTTTATGCATTCTTGTCTCTAACGGGGTGAAGTAATGTAATTAGGGGTTCATTATCTTGATGAATATTCAAACTTATCTCTAACGTATACTCCTATTATTTTTCTGTGTAGGCTGTTCCCAGTATTGCATTGGCTGA

mRNA sequence

GAGTTCGACAGTCCGCTGATTCTGGTTTTAGTTCCTATGCTTTTTCCTGAAACTCCAAGGGTTTGAGCTTTTGGAACTGGAAATGAGAAGATGGATCAACCACAGCGATCGTCATCAGTAACGGCGGTCTCCACTTCCCGCGCTTACCAGTTTCACCCAGCTCGAGCTGCCATTGCCAATCTCTTCGACCTCTACTTGGGAAGGAGTAATCGTCTAAAGCCCGAAGATTCAGCTCGAGAACCTCCGAACAAGGCCCAAAAGCGTGTAGTAGCTATTAACAGAGAGCTTCCTCCTCGGAACGAGCAGTTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTGCAGACTATGATCAGTTGCATGCTGTGACTGAATCAGTTCTTATCTCCCTAGTTGTACAGTGCAGTGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGGAGTTTATGCAGTATAGGTTACATTAATTGGGACACTTTTTTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTCCCTGGGCCAGGGAAGTCAAGCTGCGCCTACTACTGTCTCAACTACAAATTTATCGCAGTCTGGGGTGCTTCCATCCTCAAACCCAGTCCCTAACAGTTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCGTTACCATCGGTTCATGGAATCAGTTCACCTGCTCAATCAAGCATCGATCCAACTTCTTGCACAGCATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCATCTGCAGTTAGGGTCAATTCATTTTTGAGAAATAATGCAATAAGCAGTCTACGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATTTGATTTGAAACCAGTGACGCGTGCTGATATTTTTTCCCACATGCTTAATTGGATGGTTAATTGGGATCAACGGCAGCAAGGGATTGAGGAATCAGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGGAGAACAAATGTCGTGTGCCTTTCTATGAATTACTACGCAGTGGCTTGCAATTTATTGATAACATTCCTGATGATGAAGCCTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCAACACCTTCACTGCCCTACATTTGGGACTCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTCGCGTCATTCACCAATCACATATCCAAGTGTACTTGGTGAACCTCTGCATGGAGAGGATATTGCATCAGCTATTCAGAGAGGAACTCGAGACTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACCCCATCACCTGAATGGTGGAAGCGCGTGCTTCTTGTGGCTCCTGGCTATAGGTCTCCTGCACAGGGACTTAGTCCTGGTGCTGTGTTTACATCTGAGATGATATGTGAGGCGACAATTGATAGAATATTTGAGCTATTGAAGCTGACAAATTCAGGCAACTGCAATTTCTTTGTGATTCATCTTTTTATTCTGCCACTTAGTCATGATATTCTTTATGAAAAGATACATTGCTGGCAAGAGTGGCTCGTCTTCTCCGATATATTCTATTTTCTTATGAAAAGCGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTTTTCTCGTGTAACAGAGGGAGGTCACCATGTCTTAAGGACAAACCATGTCACTTGGCTGTTTGCACAGATCATTCGTGTTGAGCTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGCTGATCCAAATAATCCTCAAAGCATCTTGCTTGATTTTATTAGTAGTTGTCAGAACTTGCGTATTTGGTCATTGAACACAGCAACAAGAGAATATTTGAATAATGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCAATTAAAGGTGATCGTATGATGGATTATATGAACATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATACACCATGGCGCAACCAGCATGTGAAACTGTGATGAATTGGCTATCTTCTGCTGGGGTTCCAGAACTATCATCAGCACAAAATTTACAGACCAATGAGAGGATAATGATAATGCGAGAAGTGAGCCCATTGCCGATGTCTTTATTATCAGGCTGTTCCCAGTATTGCATTGGCTGA

Coding sequence (CDS)

ATGGATCAACCACAGCGATCGTCATCAGTAACGGCGGTCTCCACTTCCCGCGCTTACCAGTTTCACCCAGCTCGAGCTGCCATTGCCAATCTCTTCGACCTCTACTTGGGAAGGAGTAATCGTCTAAAGCCCGAAGATTCAGCTCGAGAACCTCCGAACAAGGCCCAAAAGCGTGTAGTAGCTATTAACAGAGAGCTTCCTCCTCGGAACGAGCAGTTCCTTTTAGATTTTGAGCAAATTCAGAATCAATTTGCAGACTATGATCAGTTGCATGCTGTGACTGAATCAGTTCTTATCTCCCTAGTTGTACAGTGCAGTGGTCATGTACCAAGGGCAGAATTTCTTCTCTTTGCTTTACGGAGTTTATGCAGTATAGGTTACATTAATTGGGACACTTTTTTGCCATCCCTTCTTTCTTCAATCTCATCTGCAGAAGTTTCCCTGGGCCAGGGAAGTCAAGCTGCGCCTACTACTGTCTCAACTACAAATTTATCGCAGTCTGGGGTGCTTCCATCCTCAAACCCAGTCCCTAACAGTTCTACTTTTCAGTCTTCCAATCCTGCCTCTCCGTTACCATCGGTTCATGGAATCAGTTCACCTGCTCAATCAAGCATCGATCCAACTTCTTGCACAGCATTATCACCAATCAAATCCTCTGATCTTTCTGGGACTGGATTACCATCTGCAGTTAGGGTCAATTCATTTTTGAGAAATAATGCAATAAGCAGTCTACGTCAGCTTTGTTGCAAGATTATCTTAAGTGGTCTTAAATTTGATTTGAAACCAGTGACGCGTGCTGATATTTTTTCCCACATGCTTAATTGGATGGTTAATTGGGATCAACGGCAGCAAGGGATTGAGGAATCAGAGAATATGAAATCCTGGAGGCCTGACAAGGCTCTCATTGAATGGCTACATAGCTGTTTGGATGTGGTCTGGCTTTTGGTTGAGGAGAACAAATGTCGTGTGCCTTTCTATGAATTACTACGCAGTGGCTTGCAATTTATTGATAACATTCCTGATGATGAAGCCTTATTTACACTCATCTTGGAGATCCATAGGAGGCGAGATATGATGGCAATGCACATGCAGATGTTGGATCAACACCTTCACTGCCCTACATTTGGGACTCAGCGGATTTTTTCTCAAACAATGCAGAACATATCTGGTGAAGCAGTAGCAAGCTCGCGTCATTCACCAATCACATATCCAAGTGTACTTGGTGAACCTCTGCATGGAGAGGATATTGCATCAGCTATTCAGAGAGGAACTCGAGACTGGGAAAGAGCTATGCGTTGTATAAGGCATGCTCTTCGCACAACCCCATCACCTGAATGGTGGAAGCGCGTGCTTCTTGTGGCTCCTGGCTATAGGTCTCCTGCACAGGGACTTAGTCCTGGTGCTGTGTTTACATCTGAGATGATATGTGAGGCGACAATTGATAGAATATTTGAGCTATTGAAGCTGACAAATTCAGGCAACTGCAATTTCTTTGTGATTCATCTTTTTATTCTGCCACTTAGTCATGATATTCTTTATGAAAAGATACATTGCTGGCAAGAGTGGCTCGTCTTCTCCGATATATTCTATTTTCTTATGAAAAGCGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTTTTCTCGTGTAACAGAGGGAGGTCACCATGTCTTAAGGACAAACCATGTCACTTGGCTGTTTGCACAGATCATTCGTGTTGAGCTTGTGATGAGTGCTTTGAATTCAGATGCAAGGAAGGTGGAGACGACAAGAAAAATATTATCATTTCATAGAGAAGATAAAAGTGCTGATCCAAATAATCCTCAAAGCATCTTGCTTGATTTTATTAGTAGTTGTCAGAACTTGCGTATTTGGTCATTGAACACAGCAACAAGAGAATATTTGAATAATGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAGGCAAGCAATTAAAGGTGATCGTATGATGGATTATATGAACATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATACACCATGGCGCAACCAGCATGTGAAACTGTGATGAATTGGCTATCTTCTGCTGGGGTTCCAGAACTATCATCAGCACAAAATTTACAGACCAATGAGAGGATAATGATAATGCGAGAAGTGAGCCCATTGCCGATGTCTTTATTATCAGGCTGTTCCCAGTATTGCATTGGCTGA

Homology

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BLAST of CmoCh15G010190 vs. Swiss-Prot
Match: MED23_ARATH (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana GN=MED23 PE=1 SV=1)

HSP 1 Score: 945.7 bits (2443), Expect = 3.1e-274
Identity = 491/735 (66.80%), Postives = 577/735 (78.50%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QR+ + T  S+SR+YQFHPARAAI +LF+LYLGR +R KP++S R+PPNK+QKRV 
Sbjct: 1   MDQSQRTVAATP-SSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVH 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A NR+LPPRNEQFLLDFE +Q+QF D +QL  +TESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  APNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           +LC I YINWDTFLPSLLSS+S+AE SL QG QAA  T  ++  S   V+P         
Sbjct: 121 TLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP--------- 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTG---LPSAVRVNSFLR 240
              S NP S LPS HGI SP+ S +        S      ++  G     +A+R +  +R
Sbjct: 181 --VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENAMRNSQRIR 240

Query: 241 NNAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRP 300
             A++SLRQL CKIIL G++  LKPVT A+IF +M+NW+VNWD+R  G E+S   KSWR 
Sbjct: 241 AAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVG-KSWRS 300

Query: 301 DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRD 360
           +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTLI+EIHRRRD
Sbjct: 301 EKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRD 360

Query: 361 MMAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIA 420
            MAMHM MLDQHLHCP+FGT RI SQ   N+  EAV   RHSPITYPSVLGEPL+GED+A
Sbjct: 361 AMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLA 420

Query: 421 SAIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQ-GLSPGAVFTSEMIC 480
            +I +G+ DWERA+RCIRHA+RTTPSP+WWKRVL+VAP YR   Q G  PGAVFTS+MIC
Sbjct: 421 MSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMIC 480

Query: 481 EATIDRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSG 540
           EA IDRI ELLKLTNSGN  F    + ++ ++   LY   +CWQEWLVFSDIF+FL+KSG
Sbjct: 481 EAIIDRIVELLKLTNSGNDCF---GIDLVSVTFPPLYADANCWQEWLVFSDIFFFLIKSG 540

Query: 541 CIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILS 600
           C DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKILS
Sbjct: 541 CTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALNSDAKKVETTRKILS 600

Query: 601 FHREDKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIK 660
           FHRED+++DPNNPQS+LLDF+SSCQNLRIWSL+T TR YLNNEQL KGKQIDEWWR   K
Sbjct: 601 FHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWRS--K 660

Query: 661 GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 720
           G+RMMDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLSSAG+ EL     LQ N+R+M+ 
Sbjct: 661 GERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMT 707

Query: 721 REVSPLPMSLLSGCS 732
           +EV+PLPMSLLSG S
Sbjct: 721 QEVTPLPMSLLSGFS 707

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BLAST of CmoCh15G010190 vs. TrEMBL
Match: M5XL69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000154mg PE=4 SV=1)

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 568/731 (77.70%), Postives = 640/731 (87.55%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QRSSS +A S SRAYQFHPARAAI NLFDLYLGRS+R KPEDS REPPNK+QKRVV
Sbjct: 1   MDQNQRSSSSSA-SASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVV 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A+NRELPPRNEQFLLDFEQ+Q+QF D +QL  VTESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  ALNRELPPRNEQFLLDFEQLQSQFPDQEQLRVVTESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           SLC+IG+INWD+FLPSL SS+S+AE+S+GQGSQA P   S     QSG+L SSN + +SS
Sbjct: 121 SLCTIGHINWDSFLPSLFSSVSTAEMSVGQGSQAMPAVSS-----QSGMLQSSNNILHSS 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
            FQSSNPASPLP+VHGI SP+QS+I+P+SC  +SP+KSSD+   G  +  RVNS +R+NA
Sbjct: 181 NFQSSNPASPLPAVHGIGSPSQSAIEPSSCVTMSPVKSSDMPCNGQQATARVNSSIRDNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300
           ISSLRQLCCKIIL+GL+F+L+PVT ADIFSHMLNW+VNWDQ+Q G++ES+ +KSWRP KA
Sbjct: 241 ISSLRQLCCKIILTGLEFNLRPVTHADIFSHMLNWLVNWDQKQLGVDESDGVKSWRPGKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360
           LIEWLHSCLDV+WLLV+E+KCRVPFYELLRSGLQF++NIPDDEALFTLILEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVIWLLVDEDKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420
           MHM+MLDQHLHCPTFGT RIFSQT  ++SGEAVAS R+SPITYPSVLGEPLHGED+A++I
Sbjct: 361 MHMKMLDQHLHCPTFGTHRIFSQTTPSVSGEAVASLRYSPITYPSVLGEPLHGEDLATSI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480
            +G+ DWERA+RCIRHAL TTPSP+WWKRVLLVAP YRSP+QG +PGAVFTSEMICE TI
Sbjct: 421 PKGSLDWERALRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFTSEMICEGTI 480

Query: 481 DRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDF 540
           DRI ELLKLTNS                       I+CWQEWLVFSDIF+FL+KSGC+DF
Sbjct: 481 DRIVELLKLTNS----------------------DINCWQEWLVFSDIFFFLIKSGCVDF 540

Query: 541 ADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHRE 600
            DFV KL SR+TEG  H+LRTNHVTWL AQIIRVELVMSALN+DARKVETTRKILSFH+E
Sbjct: 541 VDFVDKLVSRLTEGDQHILRTNHVTWLLAQIIRVELVMSALNADARKVETTRKILSFHKE 600

Query: 601 DKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRM 660
           D+S+DPN+PQSILLDFISSCQNLRIWSLNT TREYLNNEQLQKGKQIDEWWRQA KGDRM
Sbjct: 601 DRSSDPNSPQSILLDFISSCQNLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASKGDRM 660

Query: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVS 720
           MDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLS+AGV E     NLQ+NER+M+MREVS
Sbjct: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSAAGVAESLPGTNLQSNERLMVMREVS 703

Query: 721 PLPMSLLSGCS 732
           PLPMSLLSG S
Sbjct: 721 PLPMSLLSGFS 703

[Close]

BLAST of CmoCh15G010190 vs. TrEMBL
Match: V4UBA0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014030mg PE=4 SV=1)

HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 560/733 (76.40%), Postives = 633/733 (86.36%), Query Frame = 1


Query: 2   DQPQRSS--SVTAVS-TSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKR 61
           +Q QRSS  + TA S +SRAYQFHPARAAI +LF+LYLGRS+R K +DS R+PPNK QKR
Sbjct: 4   NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63

Query: 62  VVAINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFA 121
           V+A+NRELPPRNEQFL+DFEQ+Q+QF D DQL +VTESVLISLVVQC  HVPRAEF+LFA
Sbjct: 64  VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISLVVQCCSHVPRAEFILFA 123

Query: 122 LRSLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPN 181
           LRSLCSIGYINWDTFLPSLLSS+SSAE+S GQGSQA P  VS T+L QSG+LP+S+ +PN
Sbjct: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPA-VSATSLQQSGMLPTSSGIPN 183

Query: 182 SSTFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRN 241
           SS +QSSNPASPLPSVHGI SPAQS+I+ + C A+SP+KSSD+S TG     RVNS +R+
Sbjct: 184 SSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRD 243

Query: 242 NAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPD 301
           NAISSLRQLCCKIIL+GL+F LKPVT ADIF HMLNW+V WDQ+QQGI+ES+  KSWR D
Sbjct: 244 NAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLD 303

Query: 302 KALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDM 361
           KALIEWLHSCLDV+WLLV+E++CRVPFYELLR+GLQFI+NIPDDEALFTLILEIHRRRDM
Sbjct: 304 KALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDM 363

Query: 362 MAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIAS 421
           MAMHMQMLDQHLHCPTFGT RI SQT  NIS EA  + R+SPITYPSVLGEPLHGED+A+
Sbjct: 364 MAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLAT 423

Query: 422 AIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEA 481
           +IQRG+ DWERAMRCIRHA+R TPSP+WWKRVLLVAP YR+PAQG +PGAVFT EMI EA
Sbjct: 424 SIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYEMISEA 483

Query: 482 TIDRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCI 541
            IDRI ELLKLTNS                      +++CW +WL+FSD+F+FL+KSGCI
Sbjct: 484 VIDRIVELLKLTNS----------------------EVNCWHDWLIFSDVFFFLVKSGCI 543

Query: 542 DFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFH 601
           DF DFV KL SR+ +G +H+LRTNHVTWL AQIIRVELVM ALNSD+RKVETTRKILSFH
Sbjct: 544 DFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFH 603

Query: 602 REDKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGD 661
           RED+  DPNNPQSILLDFISSCQNLRIWSLNT+TREYLNNEQLQKGKQIDEWWRQ  KGD
Sbjct: 604 REDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGD 663

Query: 662 RMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMRE 721
           RMMDYMNMDDRS+GMFWVVSYTMAQPACETVMNWLSSAGV EL    NL  NER+M+MRE
Sbjct: 664 RMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMRE 712

Query: 722 VSPLPMSLLSGCS 732
           V+PLPMSLL+G S
Sbjct: 724 VNPLPMSLLTGFS 712

[Close]

BLAST of CmoCh15G010190 vs. TrEMBL
Match: A0A067FB48_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000338mg PE=4 SV=1)

HSP 1 Score: 1112.8 bits (2877), Expect = 0.0e+00
Identity = 558/733 (76.13%), Postives = 633/733 (86.36%), Query Frame = 1


Query: 2   DQPQRSS--SVTAVS-TSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKR 61
           +Q QRSS  + TA S +SRAYQFHPARAAI +LF+LYLGRS+R K +DS R+PPNK QKR
Sbjct: 4   NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63

Query: 62  VVAINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFA 121
           V+A+NRELPPRNEQFL+DFEQ+Q+QF D DQL +VTESVLIS+VVQC  HVPRAEF+LFA
Sbjct: 64  VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123

Query: 122 LRSLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPN 181
           LRSLCSIGYINWDTFLPSLLSS+SSAE+S GQGSQA P  VS T+L QSG+LP+S+ +PN
Sbjct: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPA-VSATSLQQSGMLPTSSGIPN 183

Query: 182 SSTFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRN 241
           SS +QSSNPASPLPSVHGI SPAQS+I+ + C A+SP+KSSD+S TG     RVNS +R+
Sbjct: 184 SSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRD 243

Query: 242 NAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPD 301
           NAISSLRQLCCKIIL+GL+F LKPVT ADIF HMLNW+V WDQ+QQGI+ES+  KSWR D
Sbjct: 244 NAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLD 303

Query: 302 KALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDM 361
           KALIEWLHSCLDV+WLLV+E++CRVPFYELLR+GLQFI+NIPDDEALFTLILEIHRRRDM
Sbjct: 304 KALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDM 363

Query: 362 MAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIAS 421
           MAMHMQMLDQHLHCPTFGT RI SQT  NIS EA  + R+SPITYPSVLGEPLHGED+A+
Sbjct: 364 MAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLAT 423

Query: 422 AIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEA 481
           +IQRG+ DWERAMRCIRHA+R TPSP+WWKRVLLVAP YR+PAQG +PGAVFT +MI EA
Sbjct: 424 SIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEA 483

Query: 482 TIDRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCI 541
            IDRI ELLKLTNS                      +++CW +WL+FSD+F+FL+KSGCI
Sbjct: 484 VIDRIVELLKLTNS----------------------EVNCWHDWLIFSDVFFFLVKSGCI 543

Query: 542 DFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFH 601
           DF DFV KL SR+ +G +H+LRTNHVTWL AQIIRVELVM ALNSD+RKVETTRKILSFH
Sbjct: 544 DFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFH 603

Query: 602 REDKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGD 661
           RED+  DPNNPQSILLDFISSCQNLRIWSLNT+TREYLNNEQLQKGKQIDEWWRQ  KGD
Sbjct: 604 REDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGD 663

Query: 662 RMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMRE 721
           RMMDYMNMDDRS+GMFWVVSYTMAQPACETVMNWLSSAGV EL    NL  NER+M+MRE
Sbjct: 664 RMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMRE 712

Query: 722 VSPLPMSLLSGCS 732
           V+PLPMSLL+G S
Sbjct: 724 VNPLPMSLLTGFS 712

[Close]

BLAST of CmoCh15G010190 vs. TrEMBL
Match: A0A067FB53_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000338mg PE=4 SV=1)

HSP 1 Score: 1112.8 bits (2877), Expect = 0.0e+00
Identity = 558/733 (76.13%), Postives = 633/733 (86.36%), Query Frame = 1


Query: 2   DQPQRSS--SVTAVS-TSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKR 61
           +Q QRSS  + TA S +SRAYQFHPARAAI +LF+LYLGRS+R K +DS R+PPNK QKR
Sbjct: 4   NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63

Query: 62  VVAINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFA 121
           V+A+NRELPPRNEQFL+DFEQ+Q+QF D DQL +VTESVLIS+VVQC  HVPRAEF+LFA
Sbjct: 64  VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123

Query: 122 LRSLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPN 181
           LRSLCSIGYINWDTFLPSLLSS+SSAE+S GQGSQA P  VS T+L QSG+LP+S+ +PN
Sbjct: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPA-VSATSLQQSGMLPTSSGIPN 183

Query: 182 SSTFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRN 241
           SS +QSSNPASPLPSVHGI SPAQS+I+ + C A+SP+KSSD+S TG     RVNS +R+
Sbjct: 184 SSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSVRD 243

Query: 242 NAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPD 301
           NAISSLRQLCCKIIL+GL+F LKPVT ADIF HMLNW+V WDQ+QQGI+ES+  KSWR D
Sbjct: 244 NAISSLRQLCCKIILTGLEFSLKPVTHADIFYHMLNWLVTWDQKQQGIDESDG-KSWRLD 303

Query: 302 KALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDM 361
           KALIEWLHSCLDV+WLLV+E++CRVPFYELLR+GLQFI+NIPDDEALFTLILEIHRRRDM
Sbjct: 304 KALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDM 363

Query: 362 MAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIAS 421
           MAMHMQMLDQHLHCPTFGT RI SQT  NIS EA  + R+SPITYPSVLGEPLHGED+A+
Sbjct: 364 MAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLAT 423

Query: 422 AIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEA 481
           +IQRG+ DWERAMRCIRHA+R TPSP+WWKRVLLVAP YR+PAQG +PGAVFT +MI EA
Sbjct: 424 SIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEA 483

Query: 482 TIDRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCI 541
            IDRI ELLKLTNS                      +++CW +WL+FSD+F+FL+KSGCI
Sbjct: 484 VIDRIVELLKLTNS----------------------EVNCWHDWLIFSDVFFFLVKSGCI 543

Query: 542 DFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFH 601
           DF DFV KL SR+ +G +H+LRTNHVTWL AQIIRVELVM ALNSD+RKVETTRKILSFH
Sbjct: 544 DFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFH 603

Query: 602 REDKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGD 661
           RED+  DPNNPQSILLDFISSCQNLRIWSLNT+TREYLNNEQLQKGKQIDEWWRQ  KGD
Sbjct: 604 REDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGD 663

Query: 662 RMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMRE 721
           RMMDYMNMDDRS+GMFWVVSYTMAQPACETVMNWLSSAGV EL    NL  NER+M+MRE
Sbjct: 664 RMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMRE 712

Query: 722 VSPLPMSLLSGCS 732
           V+PLPMSLL+G S
Sbjct: 724 VNPLPMSLLTGFS 712

[Close]

BLAST of CmoCh15G010190 vs. TrEMBL
Match: W9SDN6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003995 PE=4 SV=1)

HSP 1 Score: 1100.9 bits (2846), Expect = 0.0e+00
Identity = 555/718 (77.30%), Postives = 623/718 (86.77%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QR SS      SRAYQFHP RAAI NLFDLYLGRS+R KP+D+ REPPNK QKRV+
Sbjct: 1   MDQNQRPSSA-----SRAYQFHPGRAAIINLFDLYLGRSSRQKPDDATREPPNKTQKRVI 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A+NRELPPRNEQFL+DFEQIQ+QF+D +QL AVTESVLISLVVQCS H PRA+FLLFALR
Sbjct: 61  ALNRELPPRNEQFLIDFEQIQSQFSDQEQLRAVTESVLISLVVQCSSHAPRADFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           SLCSIGYINWD+FLPSLLSS+S+AE+S+GQG+Q+  T VS    SQ GVLPSS+ + +S+
Sbjct: 121 SLCSIGYINWDSFLPSLLSSVSTAEMSVGQGTQSI-TAVS----SQPGVLPSSSTITSSA 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
            FQSSNPASPLPSVHGI SPAQS+I+P SC  LSP+KSSD+SG    S  RVNS +R+NA
Sbjct: 181 NFQSSNPASPLPSVHGIGSPAQSAIEPASCVTLSPVKSSDVSGAVQQSNSRVNSLIRDNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300
           ISSLRQLCCKIIL+GL+F+LKPVT ADIFS+MLNW+VNWDQ+QQGI+ES+  KS RPDK+
Sbjct: 241 ISSLRQLCCKIILAGLEFNLKPVTLADIFSYMLNWLVNWDQKQQGIDESDVAKSGRPDKS 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360
           LIEWLHSCLDV+WLLVEE+KCRVPFYELLRSGLQFI+NIPDDEALFTLILEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420
           MHMQMLDQHLHCPTFGTQRI S    NISGEAV S R+SPITYPSVLGEPLHGED+A++I
Sbjct: 361 MHMQMLDQHLHCPTFGTQRIISHITPNISGEAVTSLRYSPITYPSVLGEPLHGEDLATSI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480
           Q+G+ DWERA+RCIRHA R+TPSP+WWKRVLLVAP YR P  G +PGAVF+SEMICE TI
Sbjct: 421 QKGSLDWERALRCIRHAFRSTPSPDWWKRVLLVAPCYRPPPHGSTPGAVFSSEMICEGTI 480

Query: 481 DRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDF 540
           DRI ELLKLTNS                      +I+CWQEW VFSDIF+FL+KSGCIDF
Sbjct: 481 DRIVELLKLTNS----------------------EINCWQEWRVFSDIFFFLIKSGCIDF 540

Query: 541 ADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHRE 600
            DFV KL SRVTEG +++LRTNHVT L A+IIRVELVM+ALN+DARKVETTRKILSFHRE
Sbjct: 541 VDFVDKLVSRVTEGDNNILRTNHVTLLIAEIIRVELVMNALNTDARKVETTRKILSFHRE 600

Query: 601 DKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRM 660
           D+S+DPN+PQ ILLDFISSCQNLRIWSLNT+TREYLN+EQLQKGKQIDEWWRQA KGDRM
Sbjct: 601 DRSSDPNSPQGILLDFISSCQNLRIWSLNTSTREYLNSEQLQKGKQIDEWWRQASKGDRM 660

Query: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMRE 719
           MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGV EL    NLQ+NER+M+MRE
Sbjct: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVTELLPGANLQSNERLMVMRE 686

[Close]

BLAST of CmoCh15G010190 vs. TAIR10
Match: AT1G23230.1 (AT1G23230.1 Mediator complex subunit Med23 (InterPro:IPR021629))

HSP 1 Score: 945.7 bits (2443), Expect = 1.8e-275
Identity = 491/735 (66.80%), Postives = 577/735 (78.50%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QR+ + T  S+SR+YQFHPARAAI +LF+LYLGR +R KP++S R+PPNK+QKRV 
Sbjct: 1   MDQSQRTVAATP-SSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKRVH 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A NR+LPPRNEQFLLDFE +Q+QF D +QL  +TESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  APNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           +LC I YINWDTFLPSLLSS+S+AE SL QG QAA  T  ++  S   V+P         
Sbjct: 121 TLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSSQSVVP--------- 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTG---LPSAVRVNSFLR 240
              S NP S LPS HGI SP+ S +        S      ++  G     +A+R +  +R
Sbjct: 181 --VSVNPTSLLPSAHGIGSPSASEVK-------SVENGQQIARAGQIVRENAMRNSQRIR 240

Query: 241 NNAISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRP 300
             A++SLRQL CKIIL G++  LKPVT A+IF +M+NW+VNWD+R  G E+S   KSWR 
Sbjct: 241 AAAVNSLRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVG-KSWRS 300

Query: 301 DKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRD 360
           +K L EWL SCLDV+WLLVEE + R+PFYELLRSGLQFI+NIPDDEALFTLI+EIHRRRD
Sbjct: 301 EKTLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRD 360

Query: 361 MMAMHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIA 420
            MAMHM MLDQHLHCP+FGT RI SQ   N+  EAV   RHSPITYPSVLGEPL+GED+A
Sbjct: 361 AMAMHMLMLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLA 420

Query: 421 SAIQRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQ-GLSPGAVFTSEMIC 480
            +I +G+ DWERA+RCIRHA+RTTPSP+WWKRVL+VAP YR   Q G  PGAVFTS+MIC
Sbjct: 421 MSIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMIC 480

Query: 481 EATIDRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSG 540
           EA IDRI ELLKLTNSGN  F    + ++ ++   LY   +CWQEWLVFSDIF+FL+KSG
Sbjct: 481 EAIIDRIVELLKLTNSGNDCF---GIDLVSVTFPPLYADANCWQEWLVFSDIFFFLIKSG 540

Query: 541 CIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILS 600
           C DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+KVETTRKILS
Sbjct: 541 CTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALNSDAKKVETTRKILS 600

Query: 601 FHREDKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIK 660
           FHRED+++DPNNPQS+LLDF+SSCQNLRIWSL+T TR YLNNEQL KGKQIDEWWR   K
Sbjct: 601 FHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWRS--K 660

Query: 661 GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 720
           G+RMMDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLSSAG+ EL     LQ N+R+M+ 
Sbjct: 661 GERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMT 707

Query: 721 REVSPLPMSLLSGCS 732
           +EV+PLPMSLLSG S
Sbjct: 721 QEVTPLPMSLLSGFS 707

[Close]

BLAST of CmoCh15G010190 vs. NCBI nr
Match: gi|659072819|ref|XP_008467111.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 23 [Cucumis melo])

HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 676/731 (92.48%), Postives = 694/731 (94.94%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QRSSS+TAVSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRV+
Sbjct: 1   MDQSQRSSSLTAVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           SLCSI YINWDTFLPSLLSSISSAEVS+GQGSQAAPT VSTTNLSQSGVLPSSNPVPNSS
Sbjct: 121 SLCSISYINWDTFLPSLLSSISSAEVSMGQGSQAAPT-VSTTNLSQSGVLPSSNPVPNSS 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
           TFQSSNPASPLPSVHGISSPAQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA
Sbjct: 181 TFQSSNPASPLPSVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300
           ISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Sbjct: 241 ISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360
           LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420
           MHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SPITYPSVLGEPLHGEDIASAI
Sbjct: 361 MHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480
           QRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATI
Sbjct: 421 QRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATI 480

Query: 481 DRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDF 540
           DRIFELLKLTNS                      +IHCWQEWLVFSDIF+FLMKSGCIDF
Sbjct: 481 DRIFELLKLTNS----------------------EIHCWQEWLVFSDIFFFLMKSGCIDF 540

Query: 541 ADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHRE 600
           ADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKI+SFHRE
Sbjct: 541 ADFVAKLFSRVTEGGQHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKIISFHRE 600

Query: 601 DKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRM 660
           DK+ADPNNPQSILLDFISSCQNLRIWSLNT TREYLN+EQLQKGKQIDEWWRQA KGDRM
Sbjct: 601 DKNADPNNPQSILLDFISSCQNLRIWSLNTTTREYLNSEQLQKGKQIDEWWRQASKGDRM 660

Query: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVS 720
           +DYMNMDD+SIGMFWVVSYTMAQPACETVMNWL+SAG PELSSAQNLQTNERIM+MREVS
Sbjct: 661 VDYMNMDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVS 708

Query: 721 PLPMSLLSGCS 732
           PLPMSLLSG S
Sbjct: 721 PLPMSLLSGFS 708

[Close]

BLAST of CmoCh15G010190 vs. NCBI nr
Match: gi|778703943|ref|XP_011655454.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 23 [Cucumis sativus])

HSP 1 Score: 1319.3 bits (3413), Expect = 0.0e+00
Identity = 671/731 (91.79%), Postives = 690/731 (94.39%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QRSSS+T VSTSRAYQFHPARAAI NLFDLYLGRSNRLK EDSAREPPNKAQKRV+
Sbjct: 1   MDQSQRSSSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKRVL 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           AINRELPPRNEQFLLDFEQIQNQF+D+DQL AVTESVLISLVVQCSGHVPRAEFLLFALR
Sbjct: 61  AINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           SLCSIGYINWDTFLPSLLSSISSAEVS+GQGSQAAPT VSTTNLSQSGVLPSSNPVPNSS
Sbjct: 121 SLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPT-VSTTNLSQSGVLPSSNPVPNSS 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
           TFQSSNPASPLP VHGISSPAQSSIDP+SCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA
Sbjct: 181 TFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300
           ISSLRQLCCKIILSGLKFDLKPVT ADIFSHMLNWMVNWDQRQQG+EESENMKSWRPDKA
Sbjct: 241 ISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360
           LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTL+LEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420
           MHMQMLDQHLH PTFGTQRIFSQTMQNISGEAVAS R+SPITYPSVLGEPLHGEDIASAI
Sbjct: 361 MHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASAI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480
           QRGTRDWERAMRCIRHALRTTPSP+WWKRVLLVAPGYRS AQGLSPGAVFTSEMICEATI
Sbjct: 421 QRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEATI 480

Query: 481 DRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDF 540
           DRIFELLKLTNS                      +IHCWQEWLVFSDIF+FLMKSGCIDF
Sbjct: 481 DRIFELLKLTNS----------------------EIHCWQEWLVFSDIFFFLMKSGCIDF 540

Query: 541 ADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHRE 600
            DFVAKLFSRVTEGG HVLRTNHVTWLF QIIRVELVMSALNSDARKVETTRKI+SFHRE
Sbjct: 541 VDFVAKLFSRVTEGGQHVLRTNHVTWLFVQIIRVELVMSALNSDARKVETTRKIVSFHRE 600

Query: 601 DKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRM 660
           DK+ADPNNPQSILLDFISSCQNLRIWSLNT TRE LN+EQLQKGKQIDEWWRQA KGDR+
Sbjct: 601 DKNADPNNPQSILLDFISSCQNLRIWSLNTITRECLNSEQLQKGKQIDEWWRQASKGDRI 660

Query: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVS 720
           +DYMNMDDRSIGMFWVVSYTMAQPACETVMNWL+SAG PELSSAQNLQTNERIM+MREVS
Sbjct: 661 VDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVS 708

Query: 721 PLPMSLLSGCS 732
           PLPMSLLSG S
Sbjct: 721 PLPMSLLSGFS 708

[Close]

BLAST of CmoCh15G010190 vs. NCBI nr
Match: gi|596285563|ref|XP_007225475.1| (hypothetical protein PRUPE_ppa000154mg [Prunus persica])

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 568/731 (77.70%), Postives = 640/731 (87.55%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QRSSS +A S SRAYQFHPARAAI NLFDLYLGRS+R KPEDS REPPNK+QKRVV
Sbjct: 1   MDQNQRSSSSSA-SASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVV 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A+NRELPPRNEQFLLDFEQ+Q+QF D +QL  VTESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  ALNRELPPRNEQFLLDFEQLQSQFPDQEQLRVVTESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           SLC+IG+INWD+FLPSL SS+S+AE+S+GQGSQA P   S     QSG+L SSN + +SS
Sbjct: 121 SLCTIGHINWDSFLPSLFSSVSTAEMSVGQGSQAMPAVSS-----QSGMLQSSNNILHSS 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
            FQSSNPASPLP+VHGI SP+QS+I+P+SC  +SP+KSSD+   G  +  RVNS +R+NA
Sbjct: 181 NFQSSNPASPLPAVHGIGSPSQSAIEPSSCVTMSPVKSSDMPCNGQQATARVNSSIRDNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300
           ISSLRQLCCKIIL+GL+F+L+PVT ADIFSHMLNW+VNWDQ+Q G++ES+ +KSWRP KA
Sbjct: 241 ISSLRQLCCKIILTGLEFNLRPVTHADIFSHMLNWLVNWDQKQLGVDESDGVKSWRPGKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360
           LIEWLHSCLDV+WLLV+E+KCRVPFYELLRSGLQF++NIPDDEALFTLILEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVIWLLVDEDKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420
           MHM+MLDQHLHCPTFGT RIFSQT  ++SGEAVAS R+SPITYPSVLGEPLHGED+A++I
Sbjct: 361 MHMKMLDQHLHCPTFGTHRIFSQTTPSVSGEAVASLRYSPITYPSVLGEPLHGEDLATSI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480
            +G+ DWERA+RCIRHAL TTPSP+WWKRVLLVAP YRSP+QG +PGAVFTSEMICE TI
Sbjct: 421 PKGSLDWERALRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFTSEMICEGTI 480

Query: 481 DRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDF 540
           DRI ELLKLTNS                       I+CWQEWLVFSDIF+FL+KSGC+DF
Sbjct: 481 DRIVELLKLTNS----------------------DINCWQEWLVFSDIFFFLIKSGCVDF 540

Query: 541 ADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHRE 600
            DFV KL SR+TEG  H+LRTNHVTWL AQIIRVELVMSALN+DARKVETTRKILSFH+E
Sbjct: 541 VDFVDKLVSRLTEGDQHILRTNHVTWLLAQIIRVELVMSALNADARKVETTRKILSFHKE 600

Query: 601 DKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRM 660
           D+S+DPN+PQSILLDFISSCQNLRIWSLNT TREYLNNEQLQKGKQIDEWWRQA KGDRM
Sbjct: 601 DRSSDPNSPQSILLDFISSCQNLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASKGDRM 660

Query: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVS 720
           MDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLS+AGV E     NLQ+NER+M+MREVS
Sbjct: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSAAGVAESLPGTNLQSNERLMVMREVS 703

Query: 721 PLPMSLLSGCS 732
           PLPMSLLSG S
Sbjct: 721 PLPMSLLSGFS 703

[Close]

BLAST of CmoCh15G010190 vs. NCBI nr
Match: gi|645229394|ref|XP_008221446.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Prunus mume])

HSP 1 Score: 1138.3 bits (2943), Expect = 0.0e+00
Identity = 570/731 (77.98%), Postives = 639/731 (87.41%), Query Frame = 1


Query: 1   MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVV 60
           MDQ QRSSS +A S SRAYQFHPARAAI NLFDLYLGRS+R KPEDS REPPNK+QKRVV
Sbjct: 1   MDQNQRSSSSSA-SASRAYQFHPARAAIVNLFDLYLGRSSRQKPEDSVREPPNKSQKRVV 60

Query: 61  AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR 120
           A+NRELPPRNEQFLLDFEQ+Q+QF D DQL  VTESVLISLVVQCS H PRAEFLLFALR
Sbjct: 61  ALNRELPPRNEQFLLDFEQLQSQFPDQDQLRVVTESVLISLVVQCSNHAPRAEFLLFALR 120

Query: 121 SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS 180
           SLC+IG+INWD+FLPSL SS+S+AE+S+GQGSQA P   S     QSG+L SSN +P+SS
Sbjct: 121 SLCTIGHINWDSFLPSLFSSVSTAEMSVGQGSQAMPAVSS-----QSGMLQSSNNIPHSS 180

Query: 181 TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA 240
            FQ+SNPASPLP+VHGI SP QS+I+P+SC  +SP+KSSD+   G  +  RVNS +R+NA
Sbjct: 181 NFQTSNPASPLPAVHGIGSPGQSAIEPSSCVTMSPVKSSDMPCNGQQATARVNSSIRDNA 240

Query: 241 ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA 300
           ISSLRQLCCKIIL+GL+F+LKPVT ADIFSHMLNW+VNWDQ+Q G++ES+ +KSWRP KA
Sbjct: 241 ISSLRQLCCKIILTGLEFNLKPVTHADIFSHMLNWLVNWDQKQLGVDESDGVKSWRPGKA 300

Query: 301 LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA 360
           LIEWLHSCLDV+WLLV+E+KCRVPFYELLRSGLQF++NIPDDEALFTLILEIHRRRDMMA
Sbjct: 301 LIEWLHSCLDVIWLLVDEDKCRVPFYELLRSGLQFMENIPDDEALFTLILEIHRRRDMMA 360

Query: 361 MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI 420
           MHM+MLDQHLHCPTFGT RIFSQT  ++SGEAVAS R+SPITYPSVLGEPLHGED+A++I
Sbjct: 361 MHMKMLDQHLHCPTFGTHRIFSQTTPSVSGEAVASLRYSPITYPSVLGEPLHGEDLATSI 420

Query: 421 QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI 480
            +G+ DWERA+RCIRHAL TTPSP+WWKRVLLVAP YRSP+QG +PGAVFTSEMICE TI
Sbjct: 421 PKGSLDWERALRCIRHALCTTPSPDWWKRVLLVAPCYRSPSQGPTPGAVFTSEMICEGTI 480

Query: 481 DRIFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDF 540
           DRI ELLKLTNS                       I+CWQEWLVFSDIF+FL+KSGC+DF
Sbjct: 481 DRIVELLKLTNS----------------------DINCWQEWLVFSDIFFFLIKSGCVDF 540

Query: 541 ADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHRE 600
            DFV KL SR+TEG   +LRTNHVTWL AQIIRVELVMSALN DARKVETTRKILSFH+E
Sbjct: 541 VDFVDKLVSRLTEGDQLILRTNHVTWLLAQIIRVELVMSALNGDARKVETTRKILSFHKE 600

Query: 601 DKSADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRM 660
           DKS+DPN+PQSILLDFISSCQNLRIWSLNT TREYLNNEQLQKGKQIDEWWRQA KGDRM
Sbjct: 601 DKSSDPNSPQSILLDFISSCQNLRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASKGDRM 660

Query: 661 MDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVS 720
           +DYMNMDDRSIGMFWVVSYTMAQPACETV+NWLS+AGV E  S  NLQ+NER+M+MREVS
Sbjct: 661 VDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSAAGVAE--SGTNLQSNERLMVMREVS 701

Query: 721 PLPMSLLSGCS 732
           PLPMSLLSG S
Sbjct: 721 PLPMSLLSGFS 701

[Close]

BLAST of CmoCh15G010190 vs. NCBI nr
Match: gi|1009154881|ref|XP_015895411.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 574/729 (78.74%), Postives = 631/729 (86.56%), Query Frame = 1


Query: 3   QPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVVAI 62
           QPQRSSS     TSRAYQFHP RAAI NLFDLYLGRS+  KPED   +PPNK QKRV A 
Sbjct: 4   QPQRSSS-----TSRAYQFHPGRAAIVNLFDLYLGRSSCQKPEDLV-QPPNKTQKRVTAF 63

Query: 63  NRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALRSL 122
           NRELPPRNEQFLLDFEQIQ+QFAD +QL AVTESVLISLVVQCSGH PRAEFLLFALRSL
Sbjct: 64  NRELPPRNEQFLLDFEQIQSQFADQEQLRAVTESVLISLVVQCSGHAPRAEFLLFALRSL 123

Query: 123 CSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSSTF 182
            S+GYINWDTFLPSLLSS+S+AE+S+GQGSQ  P   S     Q G+LPSSN +PNSS F
Sbjct: 124 FSVGYINWDTFLPSLLSSVSNAEMSVGQGSQTIPAVSS-----QPGILPSSNAIPNSSNF 183

Query: 183 QSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNAIS 242
           QSSNPASP+PS+HGI SPAQS+I+ + CTALSPIKSSD+S T    + RVNS +R+NAIS
Sbjct: 184 QSSNPASPIPSIHGIGSPAQSAIESSPCTALSPIKSSDISCT--VQSTRVNSSIRDNAIS 243

Query: 243 SLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKALI 302
           SLRQLCCKIIL+GL+ +LKPVT A+IFSHMLNW+VNWDQRQQGI+ES+  KS RPDKALI
Sbjct: 244 SLRQLCCKIILTGLESNLKPVTHAEIFSHMLNWLVNWDQRQQGIDESDGAKSCRPDKALI 303

Query: 303 EWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMAMH 362
           EWLHSCLDVVWLLVEE KCRVPFYELLRSGLQF++NIPDDEALFT+ILEIHRRRDMMAMH
Sbjct: 304 EWLHSCLDVVWLLVEEEKCRVPFYELLRSGLQFLENIPDDEALFTIILEIHRRRDMMAMH 363

Query: 363 MQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAIQR 422
           MQMLDQHLHCPTFGT RIFSQT  NISGEAVAS R+SPITYPSVLGEPLHGED+A++IQ+
Sbjct: 364 MQMLDQHLHCPTFGTHRIFSQTAPNISGEAVASLRYSPITYPSVLGEPLHGEDLATSIQK 423

Query: 423 GTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATIDR 482
           G+ DWERA+RCIRHALRTTPSPEWWKRVLLVAP YRSP+QG +PGAVFTSEMICEATIDR
Sbjct: 424 GSLDWERALRCIRHALRTTPSPEWWKRVLLVAPCYRSPSQGPTPGAVFTSEMICEATIDR 483

Query: 483 IFELLKLTNSGNCNFFVIHLFILPLSHDILYEKIHCWQEWLVFSDIFYFLMKSGCIDFAD 542
           I ELLKLTNS                      +I+CWQEWLVFSDIF+FL+KSGCIDF D
Sbjct: 484 IIELLKLTNS----------------------EINCWQEWLVFSDIFFFLIKSGCIDFVD 543

Query: 543 FVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDK 602
           FV KL SR+TEG HH+LRTNHVTWL AQIIRVELVM+AL  DARKVETTRKILSFHRED+
Sbjct: 544 FVDKLVSRLTEGDHHILRTNHVTWLLAQIIRVELVMNALKQDARKVETTRKILSFHREDR 603

Query: 603 SADPNNPQSILLDFISSCQNLRIWSLNTATREYLNNEQLQKGKQIDEWWRQAIKGDRMMD 662
           S+DPN+PQ ILLDFISSCQNLRIWSLNT+TREYLNNEQLQKGKQIDEWWRQA KGD+M+D
Sbjct: 604 SSDPNSPQGILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQATKGDQMLD 663

Query: 663 YMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVSPL 722
           YMNMDDRSIGMFWVVSYTMAQPA ETVMNWLS   V E ++  NL +NE +M+MREVSPL
Sbjct: 664 YMNMDDRSIGMFWVVSYTMAQPANETVMNWLSPGKVME-AAGSNLPSNESLMVMREVSPL 696

Query: 723 PMSLLSGCS 732
           PMSLLSG S
Sbjct: 724 PMSLLSGFS 696

The following BLAST results are available for this feature:

BLAST of CmoCh15G010190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MED23_ARATH	3.1e-274	66.80	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana G...	[more]

BLAST of CmoCh15G010190 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XL69_PRUPE	0.0e+00	77.70	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000154mg PE=4 SV=1	[more]
V4UBA0_9ROSI	0.0e+00	76.40	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014030mg PE=4 SV=1	[more]
A0A067FB48_CITSI	0.0e+00	76.13	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000338mg PE=4 SV=1	[more]
A0A067FB53_CITSI	0.0e+00	76.13	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000338mg PE=4 SV=1	[more]
W9SDN6_9ROSA	0.0e+00	77.30	Uncharacterized protein OS=Morus notabilis GN=L484_003995 PE=4 SV=1	[more]

BLAST of CmoCh15G010190 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23230.1	1.8e-275	66.80	Mediator complex subunit Med23 (InterPro:IPR021629)	[more]

BLAST of CmoCh15G010190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072819\|ref\|XP_008467111.1\|	0.0e+00	92.48	PREDICTED: mediator of RNA polymerase II transcription subunit 23 [Cucumis melo]	[more]
gi\|778703943\|ref\|XP_011655454.1\|	0.0e+00	91.79	PREDICTED: mediator of RNA polymerase II transcription subunit 23 [Cucumis sativ...	[more]
gi\|596285563\|ref\|XP_007225475.1\|	0.0e+00	77.70	hypothetical protein PRUPE_ppa000154mg [Prunus persica]	[more]
gi\|645229394\|ref\|XP_008221446.1\|	0.0e+00	77.98	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X1 [Pr...	[more]
gi\|1009154881\|ref\|XP_015895411.1\|	0.0e+00	78.74	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Zi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010413	glucuronoxylan metabolic process
biological_process	GO:0006487	protein N-linked glycosylation
biological_process	GO:0045492	xylan biosynthetic process
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G010190.1	CmoCh15G010190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12691	FAMILY NOT NAMED	coord: 232..271 score: 2.4E-195coord: 292..494 score: 2.4E-195coord: 517..729 score: 2.4E-195coord: 14..147 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G010190	Cucsa.280180	Cucumber (Gy14) v1	cgycmoB0771
CmoCh15G010190	CmaCh15G009720	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G010190	Cla003944	Watermelon (97103) v1	cmowmB263
CmoCh15G010190	Csa5G564790	Cucumber (Chinese Long) v2	cmocuB289
CmoCh15G010190	MELO3C005287	Melon (DHL92) v3.5.1	cmomeB245
CmoCh15G010190	ClCG01G006440	Watermelon (Charleston Gray)	cmowcgB245
CmoCh15G010190	CSPI05G19380	Wild cucumber (PI 183967)	cmocpiB298
CmoCh15G010190	Lsi09G006780	Bottle gourd (USVL1VR-Ls)	cmolsiB250
CmoCh15G010190	Cp4.1LG13g03570	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G010190	MELO3C005286.2	Melon (DHL92) v3.6.1	cmomedB279
CmoCh15G010190	CsaV3_5G028240	Cucumber (Chinese Long) v3	cmocucB0350
CmoCh15G010190	Cla97C01G006750	Watermelon (97103) v2	cmowmbB268
CmoCh15G010190	Bhi12G000805	Wax gourd	cmowgoB0359
CmoCh15G010190	CsGy5G018880	Cucumber (Gy14) v2	cgybcmoB586
CmoCh15G010190	Carg23724	Silver-seed gourd	carcmoB1274

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G010190	Cucurbita pepo (Zucchini)	cmocpeB281
CmoCh15G010190	Silver-seed gourd	carcmoB0579
CmoCh15G010190	Cucurbita moschata (Rifu)	cmocmoB263
CmoCh15G010190	Cucumber (Gy14) v1	cgycmoB0542
CmoCh15G010190	Cucurbita maxima (Rimu)	cmacmoB694
CmoCh15G010190	Cucumber (Chinese Long) v2	cmocuB283