CmoCh15G009940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G009940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF4228 domain protein
Location	Cmo_Chr15 : 5338480 .. 5339016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATTATATTTCTTGCTCCTTGGCCACGCCGTTGATCAAGAATTTCAAGGCGGTTAGGGTCGTGCTTCCAGGCGGCGAGGTCCGTCAGTTCCGGGAGTCGGTGAACGCGGCGGAGCTAATGCTCGAATGTCCTACTTACTTTCTCGCCAACGCTCAGTCTCTCCACATCGGCCGCAGATTCTCCGCACTCGCTGCCGACGAGGAATTGGAGTTTGGTAATGTTTATCTCATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACGGCGGCGGATTTAGCCACCTTCTTCATGGCGGCCAACTCTGCGGCCAGGCGGATTTCGGCCGCTAAGGTTAGGGTTATACATGATAATCGGAATCGAGAATCAGGTGAATCGGAAGCGGAATCGAGGCCGAGAATTAGCGATGAAAATAACGGACCGAGATTGAGCTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCAGTTTGCCGGTCCAGGAAGCCATTGTTGGAGACGATTAAAGAAGAGCATATTAGGGGAAGATAG

mRNA sequence

ATGGGGAATTATATTTCTTGCTCCTTGGCCACGCCGTTGATCAAGAATTTCAAGGCGGTTAGGGTCGTGCTTCCAGGCGGCGAGGTCCGTCAGTTCCGGGAGTCGGTGAACGCGGCGGAGCTAATGCTCGAATGTCCTACTTACTTTCTCGCCAACGCTCAGTCTCTCCACATCGGCCGCAGATTCTCCGCACTCGCTGCCGACGAGGAATTGGAGTTTGGTAATGTTTATCTCATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACGGCGGCGGATTTAGCCACCTTCTTCATGGCGGCCAACTCTGCGGCCAGGCGGATTTCGGCCGCTAAGGTTAGGGTTATACATGATAATCGGAATCGAGAATCAGGTGAATCGGAAGCGGAATCGAGGCCGAGAATTAGCGATGAAAATAACGGACCGAGATTGAGCTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCAGTTTGCCGGTCCAGGAAGCCATTGTTGGAGACGATTAAAGAAGAGCATATTAGGGGAAGATAG

Coding sequence (CDS)

ATGGGGAATTATATTTCTTGCTCCTTGGCCACGCCGTTGATCAAGAATTTCAAGGCGGTTAGGGTCGTGCTTCCAGGCGGCGAGGTCCGTCAGTTCCGGGAGTCGGTGAACGCGGCGGAGCTAATGCTCGAATGTCCTACTTACTTTCTCGCCAACGCTCAGTCTCTCCACATCGGCCGCAGATTCTCCGCACTCGCTGCCGACGAGGAATTGGAGTTTGGTAATGTTTATCTCATGTTTCCGATGAAGAGAGTTAACTCCGTTGTCACGGCGGCGGATTTAGCCACCTTCTTCATGGCGGCCAACTCTGCGGCCAGGCGGATTTCGGCCGCTAAGGTTAGGGTTATACATGATAATCGGAATCGAGAATCAGGTGAATCGGAAGCGGAATCGAGGCCGAGAATTAGCGATGAAAATAACGGACCGAGATTGAGCTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCAGTTTGCCGGTCCAGGAAGCCATTGTTGGAGACGATTAAAGAAGAGCATATTAGGGGAAGATAG

Homology

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BLAST of CmoCh15G009940 vs. TrEMBL
Match: A0A0A0KUY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571440 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.3e-76
Identity = 151/178 (84.83%), Postives = 165/178 (92.70%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGEVRQFR+SV AAELMLE P++FLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+AK+RV+++NR
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLNENR 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRGR 179
           N ++    +E+ PRISD N GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQA----SEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of CmoCh15G009940 vs. TrEMBL
Match: A0A061E798_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010809 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.0e-61
Identity = 128/183 (69.95%), Postives = 149/183 (81.42%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIK+ KA RV+LPGGE+RQFRES+ AAELMLECP +FL N+QSLHIGR
Sbjct: 1   MGNYISCTLATPLIKSGKAARVILPGGEIRQFRESIKAAELMLECPNFFLTNSQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSAL+ADEELEFGNVY+MFPMKRVNS+VTAAD+A  FMAANSAA+RIS  KVR++ ++ 
Sbjct: 61  RFSALSADEELEFGNVYIMFPMKRVNSMVTAADMAMLFMAANSAAKRISGGKVRILPESG 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGI-EGFPM----HRLSVCRSRKPLLETIKEEHI 179
           N    ES  E       E+ G RLSLEG+ EGFP+    +RLSVCRSRKP LETIKEE +
Sbjct: 121 NVGGQESSTEC------EDGGSRLSLEGVDEGFPVAEFKYRLSVCRSRKPSLETIKEEPV 177

[Close]

BLAST of CmoCh15G009940 vs. TrEMBL
Match: B9HJ87_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12610g PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.3e-57
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIK+ KA RVV P GEVRQFRE V AAELMLECP +FLAN+QSLHIGR
Sbjct: 1   MGNYISCTLATPLIKSSKAARVVFPAGEVRQFREPVKAAELMLECPNFFLANSQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAK--VRVIHD 120
           RFSAL+ADEELEFGNVYLMFPMKRV S VTAAD+A FFM ANSAARRIS      RV+ +
Sbjct: 61  RFSALSADEELEFGNVYLMFPMKRVFSTVTAADMAVFFMTANSAARRISGGNNITRVLPE 120

Query: 121 NRNRESGESEAESRPRISDENNGPRLSLEGIEGFPM----HRLSVCRSRKPLLETIKEEH 179
           +     G+  A   P+ S EN   RLSLE +EGFP+    +RLS CRSRKP+LETI EE 
Sbjct: 121 S----GGDQNARESPKGS-ENGAARLSLEEVEGFPLPEYKYRLSSCRSRKPMLETINEEP 179

[Close]

BLAST of CmoCh15G009940 vs. TrEMBL
Match: A0A0D2TWL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G341800 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.2e-57
Identity = 119/178 (66.85%), Postives = 141/178 (79.21%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNY+SC+LATPLIK+ KA RV+LPGGE+RQFRE V AAELMLECP +FL N+QSLHIG+
Sbjct: 1   MGNYVSCTLATPLIKSGKAARVILPGGEIRQFREPVKAAELMLECPNFFLTNSQSLHIGK 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSAL ADEELE GNV+LMFPMKR+NSV+TAAD+A  FMAANS+A+RIS+ KVRV+ +  
Sbjct: 61  RFSALTADEELELGNVFLMFPMKRLNSVITAADMAILFMAANSSAKRISSGKVRVLPETG 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRGR 179
           N E  + ++           G RLSLEG+E F  HRLSVCRSRKP LETIKEE +  R
Sbjct: 121 NVEDEQEKS---------MGGTRLSLEGVEEF-KHRLSVCRSRKPSLETIKEEPVYSR 168

[Close]

BLAST of CmoCh15G009940 vs. TrEMBL
Match: M5XYY5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011934mg PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-55
Identity = 119/190 (62.63%), Postives = 144/190 (75.79%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIK+ K+ RV+ P   VRQFRE + AAELMLECP  FLAN+QSLHIGR
Sbjct: 1   MGNYISCTLATPLIKSSKSARVIFPNSAVRQFREPIKAAELMLECPGTFLANSQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSAL ADEELEFGNVYLMFPM+R++S+VTAAD+A FFMAANSAA+RIS  KVR++ +N 
Sbjct: 61  RFSALGADEELEFGNVYLMFPMRRLSSIVTAADMAVFFMAANSAAKRISGGKVRILPENG 120

Query: 121 NR-------ESGESEAESRPRISDENNGP-RLSLEGIEGFPM----HRLSVCRSRKPLLE 179
                    ESGE   + + +    + GP RLSL+G+EG  +    +RL+ CRSRKP+LE
Sbjct: 121 REGGEMVGVESGEESHDDQDQDGKGDRGPLRLSLDGVEGLQVAEFQYRLAACRSRKPVLE 180

[Close]

BLAST of CmoCh15G009940 vs. TAIR10
Match: AT5G17350.1 (AT5G17350.1 unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-29
Identity = 80/186 (43.01%), Postives = 111/186 (59.68%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNY+S +L+     +  A +V+LP G VR     + AAELM+E P++FL +A+SL IGR
Sbjct: 1   MGNYVSSALSKTSSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLKIGR 60

Query: 61  RFSALAADEELEFG--NVYLMFPMKRVNSVVTAADLATFFMAANSAARR-----ISAAKV 120
           +F  LAAD++L+    +VY+ FPM R  S   A+DLA  F+AA    R       S+A V
Sbjct: 61  KFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKKQRRHRVGSDHSSAAV 120

Query: 121 RVIHDNRNRESGESEAESRPRISDENNGPRLSLEGIEGFP----MHRLSVCRSRKPLLET 176
           +  H+N  R S + E +    IS    G +L+LE IE F     MHR+SV +S+KP LET
Sbjct: 121 KHCHNN-GRVSPDGEGDDVKVIS---AGSKLNLEDIEEFSAAEFMHRISVSKSKKPKLET 180

[Close]

BLAST of CmoCh15G009940 vs. TAIR10
Match: AT3G03280.1 (AT3G03280.1 unknown protein)

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-27
Identity = 74/185 (40.00%), Postives = 106/185 (57.30%), Query Frame = 1


Query: 1   MGNYISCSL----ATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSL 60
           MGNY+SC+L    ++PL K      V+LP G VR       AAELM+E P+YFL + +S+
Sbjct: 1   MGNYVSCALNKTSSSPLAK------VILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSV 60

Query: 61  HIGRRFSALAADEELEFG--NVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVR 120
            +GR+F  LAAD++L+ G  +VY+ FPM R  S   A+D+A  ++            K R
Sbjct: 61  KVGRKFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYL----------TGKKR 120

Query: 121 VIHDNRNRESGESEAESRPRISDENNGPRLSLEGIEGFP----MHRLSVCRSRKPLLETI 176
             +    R S E+E     R+     GP+L+LE IE F     +HR+SV +S+KP LETI
Sbjct: 121 TKNCGHRRVSPENEDNDDVRLI----GPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETI 165

[Close]

BLAST of CmoCh15G009940 vs. TAIR10
Match: AT4G37240.1 (AT4G37240.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06
Identity = 23/87 (26.44%), Postives = 46/87 (52.87%), Query Frame = 1


Query: 21  RVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGRRFSALAADEELEFGNVYLMF 80
           +++L  G + +F   V    ++L+ P  F+ N+  +      +A++ADEEL+ G +Y   
Sbjct: 16  KLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQLGQIYFAL 75

Query: 81  PMKRVNSVVTAADLATFFMAANSAARR 108
           P+  +   + A ++A   + A+SA  R
Sbjct: 76  PLCWLRQPLKAEEMAALAVKASSALMR 102

[Close]

BLAST of CmoCh15G009940 vs. TAIR10
Match: AT5G66580.1 (AT5G66580.1 unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 3.7e-06
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 1


Query: 19  AVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGRRFSALAADEELEFGNVYL 78
           + +++L  G +++F   V   +++ + PT F+ N+  +      SA+A +EEL  G +Y 
Sbjct: 14  SAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQLYF 73

Query: 79  MFPMKRVNSVVTAADLATFFMAANSA 105
           + P+  +N  + A ++A   + A+SA
Sbjct: 74  VLPLTWLNHPLRAEEMAALAVKASSA 99

[Close]

BLAST of CmoCh15G009940 vs. TAIR10
Match: AT2G23690.1 (AT2G23690.1 unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.3e-06
Identity = 22/87 (25.29%), Postives = 45/87 (51.72%), Query Frame = 1


Query: 21  RVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGRRFSALAADEELEFGNVYLMF 80
           +++L  G + +F   V    ++ + P  F+ N+  +      SA++ADEE + G +Y   
Sbjct: 16  KLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDFDNVVSAISADEEFQLGQLYFAL 75

Query: 81  PMKRVNSVVTAADLATFFMAANSAARR 108
           P+  ++  + A ++A   + A+SA  R
Sbjct: 76  PLSSLHHSLKAEEMAALAVKASSALMR 102

[Close]

BLAST of CmoCh15G009940 vs. NCBI nr
Match: gi|659072870|ref|XP_008467138.1| (PREDICTED: uncharacterized protein LOC103504565 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 1.7e-77
Identity = 153/178 (85.96%), Postives = 165/178 (92.70%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGEVRQFR+SV AAELMLE P++FLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+AK+RV+H+NR
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLHENR 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRGR 179
           N +    E+E+ PRISD N GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQ----ESEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of CmoCh15G009940 vs. NCBI nr
Match: gi|449466290|ref|XP_004150859.1| (PREDICTED: uncharacterized protein LOC101213469 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 3.2e-76
Identity = 151/178 (84.83%), Postives = 165/178 (92.70%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIKN KAVRVVLPGGEVRQFR+SV AAELMLE P++FLANAQSLHIGR
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRIS+AK+RV+++NR
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLNENR 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRGR 179
           N ++    +E+ PRISD N GPRLSLEG+EGFPMHRLSVCRSRKPLLETIKEE IR R
Sbjct: 121 NLQA----SEAMPRISDGNEGPRLSLEGVEGFPMHRLSVCRSRKPLLETIKEEQIRSR 174

[Close]

BLAST of CmoCh15G009940 vs. NCBI nr
Match: gi|1009155069|ref|XP_015895517.1| (PREDICTED: uncharacterized protein LOC107429356 [Ziziphus jujuba])

HSP 1 Score: 241.9 bits (616), Expect = 8.6e-61
Identity = 122/183 (66.67%), Postives = 147/183 (80.33%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNY+SC+L TPLIK+ K  RVV PGGEVRQFRE + AAELML+CP YF++N++SLHIGR
Sbjct: 1   MGNYVSCTLTTPLIKSSKVARVVFPGGEVRQFREPIKAAELMLDCPNYFVSNSRSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFS L+ADEELEFGNVY+MFPM+RVNS+VTAAD+A FFMAANSAA+RIS AKVR++ ++ 
Sbjct: 61  RFSPLSADEELEFGNVYIMFPMRRVNSIVTAADMAVFFMAANSAAKRISGAKVRILPESG 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGIEGFPM-----HRLSVCRSRKPLLETIKEEHI 179
               G +EA S  +   E  GPRLSL+GIEGF       +RL+ CRSRKP+LETIKEE I
Sbjct: 121 GNAQGVAEAGSVNKEESEVGGPRLSLDGIEGFDQIPEFKYRLAACRSRKPMLETIKEEPI 180

[Close]

BLAST of CmoCh15G009940 vs. NCBI nr
Match: gi|590696042|ref|XP_007045058.1| (Uncharacterized protein TCM_010809 [Theobroma cacao])

HSP 1 Score: 241.9 bits (616), Expect = 8.6e-61
Identity = 128/183 (69.95%), Postives = 149/183 (81.42%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIK+ KA RV+LPGGE+RQFRES+ AAELMLECP +FL N+QSLHIGR
Sbjct: 1   MGNYISCTLATPLIKSGKAARVILPGGEIRQFRESIKAAELMLECPNFFLTNSQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAKVRVIHDNR 120
           RFSAL+ADEELEFGNVY+MFPMKRVNS+VTAAD+A  FMAANSAA+RIS  KVR++ ++ 
Sbjct: 61  RFSALSADEELEFGNVYIMFPMKRVNSMVTAADMAMLFMAANSAAKRISGGKVRILPESG 120

Query: 121 NRESGESEAESRPRISDENNGPRLSLEGI-EGFPM----HRLSVCRSRKPLLETIKEEHI 179
           N    ES  E       E+ G RLSLEG+ EGFP+    +RLSVCRSRKP LETIKEE +
Sbjct: 121 NVGGQESSTEC------EDGGSRLSLEGVDEGFPVAEFKYRLSVCRSRKPSLETIKEEPV 177

[Close]

BLAST of CmoCh15G009940 vs. NCBI nr
Match: gi|224099449|ref|XP_002311488.1| (hypothetical protein POPTR_0008s12610g [Populus trichocarpa])

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-57
Identity = 126/184 (68.48%), Postives = 142/184 (77.17%), Query Frame = 1


Query: 1   MGNYISCSLATPLIKNFKAVRVVLPGGEVRQFRESVNAAELMLECPTYFLANAQSLHIGR 60
           MGNYISC+LATPLIK+ KA RVV P GEVRQFRE V AAELMLECP +FLAN+QSLHIGR
Sbjct: 1   MGNYISCTLATPLIKSSKAARVVFPAGEVRQFREPVKAAELMLECPNFFLANSQSLHIGR 60

Query: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISAAK--VRVIHD 120
           RFSAL+ADEELEFGNVYLMFPMKRV S VTAAD+A FFM ANSAARRIS      RV+ +
Sbjct: 61  RFSALSADEELEFGNVYLMFPMKRVFSTVTAADMAVFFMTANSAARRISGGNNITRVLPE 120

Query: 121 NRNRESGESEAESRPRISDENNGPRLSLEGIEGFPM----HRLSVCRSRKPLLETIKEEH 179
           +     G+  A   P+ S EN   RLSLE +EGFP+    +RLS CRSRKP+LETI EE 
Sbjct: 121 S----GGDQNARESPKGS-ENGAARLSLEEVEGFPLPEYKYRLSSCRSRKPMLETINEEP 179

The following BLAST results are available for this feature:

BLAST of CmoCh15G009940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh15G009940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUY1_CUCSA	2.3e-76	84.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G571440 PE=4 SV=1	[more]
A0A061E798_THECC	6.0e-61	69.95	Uncharacterized protein OS=Theobroma cacao GN=TCM_010809 PE=4 SV=1	[more]
B9HJ87_POPTR	2.3e-57	68.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12610g PE=4 SV=1	[more]
A0A0D2TWL7_GOSRA	5.2e-57	66.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G341800 PE=4 SV=1	[more]
M5XYY5_PRUPE	2.9e-55	62.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011934mg PE=4 SV=1	[more]

BLAST of CmoCh15G009940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17350.1	5.4e-29	43.01	unknown protein	[more]
AT3G03280.1	2.9e-27	40.00	unknown protein	[more]
AT4G37240.1	1.7e-06	26.44	unknown protein	[more]
AT5G66580.1	3.7e-06	26.74	unknown protein	[more]
AT2G23690.1	8.3e-06	25.29	unknown protein	[more]

BLAST of CmoCh15G009940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072870\|ref\|XP_008467138.1\|	1.7e-77	85.96	PREDICTED: uncharacterized protein LOC103504565 [Cucumis melo]	[more]
gi\|449466290\|ref\|XP_004150859.1\|	3.2e-76	84.83	PREDICTED: uncharacterized protein LOC101213469 [Cucumis sativus]	[more]
gi\|1009155069\|ref\|XP_015895517.1\|	8.6e-61	66.67	PREDICTED: uncharacterized protein LOC107429356 [Ziziphus jujuba]	[more]
gi\|590696042\|ref\|XP_007045058.1\|	8.6e-61	69.95	Uncharacterized protein TCM_010809 [Theobroma cacao]	[more]
gi\|224099449\|ref\|XP_002311488.1\|	3.4e-57	68.48	hypothetical protein POPTR_0008s12610g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G009940.1	CmoCh15G009940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..172 score: 6.5
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 4..176 score: 1.3
None	No IPR available	PANTHER	PTHR33052:SF23	SUBFAMILY NOT NAMED	coord: 4..176 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G009940	Cucsa.280400	Cucumber (Gy14) v1	cgycmoB0771
CmoCh15G009940	CmaCh15G009540	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G009940	CmaCh04G021000	Cucurbita maxima (Rimu)	cmacmoB685
CmoCh15G009940	Cla003922	Watermelon (97103) v1	cmowmB263
CmoCh15G009940	Csa5G571440	Cucumber (Chinese Long) v2	cmocuB289
CmoCh15G009940	MELO3C005308	Melon (DHL92) v3.5.1	cmomeB245
CmoCh15G009940	ClCG01G006190	Watermelon (Charleston Gray)	cmowcgB245
CmoCh15G009940	CSPI05G19640	Wild cucumber (PI 183967)	cmocpiB298
CmoCh15G009940	Lsi09G006560	Bottle gourd (USVL1VR-Ls)	cmolsiB250
CmoCh15G009940	Cp4.1LG13g03660	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G009940	Cp4.1LG01g18300	Cucurbita pepo (Zucchini)	cmocpeB273
CmoCh15G009940	MELO3C005308.2	Melon (DHL92) v3.6.1	cmomedB279
CmoCh15G009940	CsaV3_5G028470	Cucumber (Chinese Long) v3	cmocucB0350
CmoCh15G009940	Cla97C01G006500	Watermelon (97103) v2	cmowmbB268
CmoCh15G009940	Bhi12G000779	Wax gourd	cmowgoB0359
CmoCh15G009940	CsGy5G019130	Cucumber (Gy14) v2	cgybcmoB586
CmoCh15G009940	Carg26049	Silver-seed gourd	carcmoB0578
CmoCh15G009940	Carg26345	Silver-seed gourd	carcmoB0270

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G009940	Cucurbita moschata (Rifu)	cmocmoB254