CmoCh15G009370 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTATTTTAATTTTGGTGGCACTCTTGGCTTTGGCTATGCCAAAGATTACTTCATTGTCAATAAACACGTTATGAGTGCTATCCAAACTGCCTTCATCGGAGCCATAGCATTAGGCTTTCCATATGGCCAAGCTTGTCCAATCCCGTCAATCCGAAAACTTGCTTATATTGTATTATCAAAATAATTTACAAGTATTGTATACACTTAAATAATGAAGTACAACATATGAAATTTTGTGTGTCATATGCACTCAAAATATTTCTCACATTTGATATCACATCGAGCTTGGTGAGATTAGAAAAATAAAGAAGATAAAATCGAAGACTTGGGAGGATACCCTCTCATTTCCTCTGACCATTATCACAAAATGTTGTATCTTATTCATCTTTATCCATAAAAACATAAGCATAATTTTGTGTTTGGTGTAAATTTCAATTCCAATCAAGACTCTTTCAACTCTATGCTGCACTCACTCATTTTGAGAAAAATAGAATAGAATCACACAAATATGAACCGAGTTGGTAATTTTCTTAGAAAAAATCACCAACCTTGACTTGCTTTCTTGATAAGGTATGTTTCTTGATAAGGTATGTTTGATGTTTCTCCAATTAATTTATAAATATTCAATTCAAGTAAGAAACGATATATAATTATGATTAAATCATGAGTATTGTACATTAAATAAGGGTAGATTTGATAATGGTTTAATTTGGAAGTAGGTTTCAGCTAGAATTGGAAAAGCCAAAGGCAAAAAGAGCCATACAAACTCCCGTGACCATTGTCATCTCTTACATTTTAGGCTTAATCTCGTTGGTTCCTTACATGTTTTTCTCAAAAGTCTCTGAGGTTCTGATTGAATTGATTGTCTTATCTTTGGTGGTATTCTTGATTATTCACTACGCCAATGGTTACTTCACTGTCAATAAATCTGTCATGAGCGCAGTTCAAATCACCATCATCGGAGTCATAACATCAACTGCCGCTTTTAATTTGGTCAAGCTTGTCGAACCGCGTCAACCCTAA ATGTGTTATTTTAATTTTGGTGGCACTCTTGGCTTTGGCTATGCCAAAGATTACTTCATTGTCAATAAACACGTTATGAGTGCTATCCAAACTGCCTTCATCGGAGCCATAGCATTAGGCTTTCCATATGGCCAAGCTTGTCCAATCCCGTTTCAGCTAGAATTGGAAAAGCCAAAGGCAAAAAGAGCCATACAAACTCCCGTGACCATTGTCATCTCTTACATTTTAGGCTTAATCTCGTTGGTTCCTTACATGTTTTTCTCAAAAGTCTCTGAGGTTCTGATTGAATTGATTGTCTTATCTTTGGTGGTATTCTTGATTATTCACTACGCCAATGGTTACTTCACTGTCAATAAATCTGTCATGAGCGCAGTTCAAATCACCATCATCGGAGTCATAACATCAACTGCCGCTTTTAATTTGGTCAAGCTTGTCGAACCGCGTCAACCCTAA ATGTGTTATTTTAATTTTGGTGGCACTCTTGGCTTTGGCTATGCCAAAGATTACTTCATTGTCAATAAACACGTTATGAGTGCTATCCAAACTGCCTTCATCGGAGCCATAGCATTAGGCTTTCCATATGGCCAAGCTTGTCCAATCCCGTTTCAGCTAGAATTGGAAAAGCCAAAGGCAAAAAGAGCCATACAAACTCCCGTGACCATTGTCATCTCTTACATTTTAGGCTTAATCTCGTTGGTTCCTTACATGTTTTTCTCAAAAGTCTCTGAGGTTCTGATTGAATTGATTGTCTTATCTTTGGTGGTATTCTTGATTATTCACTACGCCAATGGTTACTTCACTGTCAATAAATCTGTCATGAGCGCAGTTCAAATCACCATCATCGGAGTCATAACATCAACTGCCGCTTTTAATTTGGTCAAGCTTGTCGAACCGCGTCAACCCTAA
BLAST of CmoCh15G009370 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.6e-14 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 1
BLAST of CmoCh15G009370 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1
BLAST of CmoCh15G009370 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10 Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 1
BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0A0KSS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550250 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.6e-21 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1
BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.9e-14 Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 1
BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0D2TTP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G029700 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.0e-13 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1
BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A061EAE2_THECC (Vacuolar iron transporter 1 OS=Theobroma cacao GN=TCM_011277 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-13 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 1
BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0S3QWI8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G013600 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.3e-13 Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 1
BLAST of CmoCh15G009370 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1) HSP 1 Score: 71.2 bits (173), Expect = 5.9e-13 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1
BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|449450149|ref|XP_004142826.1| (PREDICTED: vacuolar iron transporter 1.1 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 9.5e-21 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1
BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|659072768|ref|XP_008467051.1| (PREDICTED: vacuolar iron transporter 1.1-like [Cucumis melo]) HSP 1 Score: 104.0 bits (258), Expect = 2.3e-19 Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1
BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo]) HSP 1 Score: 85.9 bits (211), Expect = 6.6e-14 Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1
BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus]) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13 Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 1
BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|823261728|ref|XP_012463599.1| (PREDICTED: vacuolar iron transporter 1 [Gossypium raimondii]) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-13 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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