CmoCh15G009370 (gene) Cucurbita moschata (Rifu)

NameCmoCh15G009370
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionVacuolar iron transporter 1
LocationCmo_Chr15 : 4793071 .. 4794098 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTATTTTAATTTTGGTGGCACTCTTGGCTTTGGCTATGCCAAAGATTACTTCATTGTCAATAAACACGTTATGAGTGCTATCCAAACTGCCTTCATCGGAGCCATAGCATTAGGCTTTCCATATGGCCAAGCTTGTCCAATCCCGTCAATCCGAAAACTTGCTTATATTGTATTATCAAAATAATTTACAAGTATTGTATACACTTAAATAATGAAGTACAACATATGAAATTTTGTGTGTCATATGCACTCAAAATATTTCTCACATTTGATATCACATCGAGCTTGGTGAGATTAGAAAAATAAAGAAGATAAAATCGAAGACTTGGGAGGATACCCTCTCATTTCCTCTGACCATTATCACAAAATGTTGTATCTTATTCATCTTTATCCATAAAAACATAAGCATAATTTTGTGTTTGGTGTAAATTTCAATTCCAATCAAGACTCTTTCAACTCTATGCTGCACTCACTCATTTTGAGAAAAATAGAATAGAATCACACAAATATGAACCGAGTTGGTAATTTTCTTAGAAAAAATCACCAACCTTGACTTGCTTTCTTGATAAGGTATGTTTCTTGATAAGGTATGTTTGATGTTTCTCCAATTAATTTATAAATATTCAATTCAAGTAAGAAACGATATATAATTATGATTAAATCATGAGTATTGTACATTAAATAAGGGTAGATTTGATAATGGTTTAATTTGGAAGTAGGTTTCAGCTAGAATTGGAAAAGCCAAAGGCAAAAAGAGCCATACAAACTCCCGTGACCATTGTCATCTCTTACATTTTAGGCTTAATCTCGTTGGTTCCTTACATGTTTTTCTCAAAAGTCTCTGAGGTTCTGATTGAATTGATTGTCTTATCTTTGGTGGTATTCTTGATTATTCACTACGCCAATGGTTACTTCACTGTCAATAAATCTGTCATGAGCGCAGTTCAAATCACCATCATCGGAGTCATAACATCAACTGCCGCTTTTAATTTGGTCAAGCTTGTCGAACCGCGTCAACCCTAA

mRNA sequence

ATGTGTTATTTTAATTTTGGTGGCACTCTTGGCTTTGGCTATGCCAAAGATTACTTCATTGTCAATAAACACGTTATGAGTGCTATCCAAACTGCCTTCATCGGAGCCATAGCATTAGGCTTTCCATATGGCCAAGCTTGTCCAATCCCGTTTCAGCTAGAATTGGAAAAGCCAAAGGCAAAAAGAGCCATACAAACTCCCGTGACCATTGTCATCTCTTACATTTTAGGCTTAATCTCGTTGGTTCCTTACATGTTTTTCTCAAAAGTCTCTGAGGTTCTGATTGAATTGATTGTCTTATCTTTGGTGGTATTCTTGATTATTCACTACGCCAATGGTTACTTCACTGTCAATAAATCTGTCATGAGCGCAGTTCAAATCACCATCATCGGAGTCATAACATCAACTGCCGCTTTTAATTTGGTCAAGCTTGTCGAACCGCGTCAACCCTAA

Coding sequence (CDS)

ATGTGTTATTTTAATTTTGGTGGCACTCTTGGCTTTGGCTATGCCAAAGATTACTTCATTGTCAATAAACACGTTATGAGTGCTATCCAAACTGCCTTCATCGGAGCCATAGCATTAGGCTTTCCATATGGCCAAGCTTGTCCAATCCCGTTTCAGCTAGAATTGGAAAAGCCAAAGGCAAAAAGAGCCATACAAACTCCCGTGACCATTGTCATCTCTTACATTTTAGGCTTAATCTCGTTGGTTCCTTACATGTTTTTCTCAAAAGTCTCTGAGGTTCTGATTGAATTGATTGTCTTATCTTTGGTGGTATTCTTGATTATTCACTACGCCAATGGTTACTTCACTGTCAATAAATCTGTCATGAGCGCAGTTCAAATCACCATCATCGGAGTCATAACATCAACTGCCGCTTTTAATTTGGTCAAGCTTGTCGAACCGCGTCAACCCTAA
BLAST of CmoCh15G009370 vs. Swiss-Prot
Match: VIT11_ORYSJ (Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.6e-14
Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  KRAIQ+ +TI +SY++G L+ L+PYMF S     ++  + ++LV  L   
Sbjct: 154 FELGLEKPDPKRAIQSALTIALSYVIGGLVPLLPYMFISTAQNAMLTSVGVTLVALLFFG 213

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEPR 149
           Y  G FT N+  +SAVQ  IIG + S AA+ + K V+ R
Sbjct: 214 YIKGRFTGNRPFLSAVQTAIIGALASAAAYGMAKAVQTR 252

BLAST of CmoCh15G009370 vs. Swiss-Prot
Match: VIT1_ARATH (Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  KRA+Q+  TI I+Y+LG  I L+PYM      + ++  +V++L    I  
Sbjct: 153 FELGLEKPDPKRALQSAFTIAIAYVLGGFIPLLPYMLIPHAMDAVVASVVITLFALFIFG 212

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVE 147
           YA G+FT +K + SA +   IG I S AAF L K+V+
Sbjct: 213 YAKGHFTGSKPLRSAFETAFIGAIASAAAFCLAKVVQ 249

BLAST of CmoCh15G009370 vs. Swiss-Prot
Match: VIT12_ORYSJ (Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP+ +RA+ +  TI ++Y++G L+ L+PYMF       +   +V++L   L   
Sbjct: 148 FELGLEKPEPRRALMSAGTIALAYVVGGLVPLLPYMFVPTADRAMATSVVVTLAALLFFG 207

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVE 147
           Y  G FT N+  +SA Q  +IG + S AAF + K V+
Sbjct: 208 YVKGRFTGNRPFISAFQTAVIGALASAAAFGMAKAVQ 244

BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0A0KSS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550250 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.6e-21
Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP+ KRAIQ+ +TI ISYILG L+ L+PYMFF K SE ++  I L+LV  L+  
Sbjct: 146 FELGLEKPEPKRAIQSALTIAISYILGGLVPLIPYMFFPKASEAVLASIALTLVALLVFG 205

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEPRQP 151
           YA GYFT NK VMSAVQ  +IG I S AA+ + K ++PRQP
Sbjct: 206 YAKGYFTGNKPVMSAVQTALIGAIASAAAYGMAKAIQPRQP 246

BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0A0KJ93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.9e-14
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  +RA+Q+  TI ++YILG L+ L+PYMF + V+  +   + L+LV  L+  
Sbjct: 158 FELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFITNVTRAVTASVALTLVALLVFG 217

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVE 147
           YA GYFT NK   SA+Q T+IG I S AAF + K ++
Sbjct: 218 YAKGYFTGNKPFKSAIQTTLIGAIASAAAFGMAKAIQ 254

BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0D2TTP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G029700 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-13
Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  +RA+Q+   I +SYILG L+ L+PYMF  +  + ++  +V+++   LI  
Sbjct: 150 FELGLEKPDPRRALQSAFNIAVSYILGGLVPLLPYMFIPRAQDAVVASVVITIAALLIFG 209

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEP 148
           YA GYFT NK V SA Q  +IG I S AAF + K++ P
Sbjct: 210 YAKGYFTGNKPVKSAFQTALIGAIASAAAFGIAKVIHP 247

BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A061EAE2_THECC (Vacuolar iron transporter 1 OS=Theobroma cacao GN=TCM_011277 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-13
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  +RA+Q+  TI ++YILG L+ L PYMF  +  + +   ++L++   LI  
Sbjct: 151 FELGLEKPDPRRALQSAFTIAVAYILGGLVPLFPYMFIPRARDAVAASVILTIAALLIFG 210

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEP 148
           YA GYFT NK V SA+Q   IG I S AAF L K+V P
Sbjct: 211 YAKGYFTGNKPVKSALQTAFIGAIASAAAFGLAKVVHP 248

BLAST of CmoCh15G009370 vs. TrEMBL
Match: A0A0S3QWI8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G013600 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-13
Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  KRA+ + +TI I+YILG ++ L+PYMF ++ SE ++  ++++LV  L+  
Sbjct: 150 FELGLEKPDPKRALYSAMTIAIAYILGGVVPLLPYMFIARASEAVVFSVIVTLVALLVFG 209

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEP 148
           YA GYFT NK   SA++  +IG I S AAF + K   P
Sbjct: 210 YAKGYFTGNKPFRSALETALIGAIASAAAFGMAKAFNP 247

BLAST of CmoCh15G009370 vs. TAIR10
Match: AT2G01770.1 (AT2G01770.1 vacuolar iron transporter 1)

HSP 1 Score: 71.2 bits (173), Expect = 5.9e-13
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  KRA+Q+  TI I+Y+LG  I L+PYM      + ++  +V++L    I  
Sbjct: 153 FELGLEKPDPKRALQSAFTIAIAYVLGGFIPLLPYMLIPHAMDAVVASVVITLFALFIFG 212

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVE 147
           YA G+FT +K + SA +   IG I S AAF L K+V+
Sbjct: 213 YAKGHFTGSKPLRSAFETAFIGAIASAAAFCLAKVVQ 249

BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|449450149|ref|XP_004142826.1| (PREDICTED: vacuolar iron transporter 1.1 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 9.5e-21
Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP+ KRAIQ+ +TI ISYILG L+ L+PYMFF K SE ++  I L+LV  L+  
Sbjct: 146 FELGLEKPEPKRAIQSALTIAISYILGGLVPLIPYMFFPKASEAVLASIALTLVALLVFG 205

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEPRQP 151
           YA GYFT NK VMSAVQ  +IG I S AA+ + K ++PRQP
Sbjct: 206 YAKGYFTGNKPVMSAVQTALIGAIASAAAYGMAKAIQPRQP 246

BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|659072768|ref|XP_008467051.1| (PREDICTED: vacuolar iron transporter 1.1-like [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-19
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYIL-GLISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP+ KRAIQ+ +TI ISYIL GL+ L+PYMFF K SE ++  + L+LV  L+  
Sbjct: 146 FELGLEKPEPKRAIQSALTIAISYILGGLVPLIPYMFFPKASEAVLASVALTLVALLVFG 205

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEPRQP 151
           YA GYFT NK   SAVQ  +IG I S AA+ + K ++PRQP
Sbjct: 206 YAKGYFTGNKPFTSAVQTALIGAIASAAAYGMAKAIQPRQP 246

BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|659129452|ref|XP_008464694.1| (PREDICTED: vacuolar iron transporter 1-like [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 6.6e-14
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  +RA+Q+  TI ++YILG L+ L+PYMF S V   +   + L+LV  L+  
Sbjct: 154 FELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISNVKRAVTASVALTLVALLVFG 213

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVE 147
           YA GYFT NK   SA+Q T+IG I S AAF + K ++
Sbjct: 214 YAKGYFTGNKPFKSAIQTTLIGAIASAAAFGMAKAIQ 250

BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|778698101|ref|XP_004142309.2| (PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  +RA+Q+  TI ++YILG L+ L+PYMF + V+  +   + L+LV  L+  
Sbjct: 158 FELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFITNVTRAVTASVALTLVALLVFG 217

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVE 147
           YA GYFT NK   SA+Q T+IG I S AAF + K ++
Sbjct: 218 YAKGYFTGNKPFKSAIQTTLIGAIASAAAFGMAKAIQ 254

BLAST of CmoCh15G009370 vs. NCBI nr
Match: gi|823261728|ref|XP_012463599.1| (PREDICTED: vacuolar iron transporter 1 [Gossypium raimondii])

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-13
Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1

Query: 51  FQLELEKPKAKRAIQTPVTIVISYILG-LISLVPYMFFSKVSEVLIELIVLSLVVFLIIH 110
           F+L LEKP  +RA+Q+   I +SYILG L+ L+PYMF  +  + ++  +V+++   LI  
Sbjct: 150 FELGLEKPDPRRALQSAFNIAVSYILGGLVPLLPYMFIPRAQDAVVASVVITIAALLIFG 209

Query: 111 YANGYFTVNKSVMSAVQITIIGVITSTAAFNLVKLVEP 148
           YA GYFT NK V SA Q  +IG I S AAF + K++ P
Sbjct: 210 YAKGYFTGNKPVKSAFQTALIGAIASAAAFGIAKVIHP 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
VIT11_ORYSJ8.6e-1444.44Vacuolar iron transporter 1.1 OS=Oryza sativa subsp. japonica GN=VIT1.1 PE=2 SV=... [more]
VIT1_ARATH1.1e-1143.30Vacuolar iron transporter 1 OS=Arabidopsis thaliana GN=VIT1 PE=2 SV=1[more]
VIT12_ORYSJ2.6e-1038.14Vacuolar iron transporter 1.2 OS=Oryza sativa subsp. japonica GN=VIT1.2 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
A0A0A0KSS5_CUCSA6.6e-2158.42Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550250 PE=4 SV=1[more]
A0A0A0KJ93_CUCSA7.9e-1447.42Uncharacterized protein OS=Cucumis sativus GN=Csa_5G025920 PE=4 SV=1[more]
A0A0D2TTP6_GOSRA1.0e-1345.92Uncharacterized protein OS=Gossypium raimondii GN=B456_013G029700 PE=4 SV=1[more]
A0A061EAE2_THECC1.3e-1347.96Vacuolar iron transporter 1 OS=Theobroma cacao GN=TCM_011277 PE=4 SV=1[more]
A0A0S3QWI8_PHAAN2.3e-1345.92Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G013600 PE=... [more]
Match NameE-valueIdentityDescription
AT2G01770.15.9e-1343.30 vacuolar iron transporter 1[more]
Match NameE-valueIdentityDescription
gi|449450149|ref|XP_004142826.1|9.5e-2158.42PREDICTED: vacuolar iron transporter 1.1 [Cucumis sativus][more]
gi|659072768|ref|XP_008467051.1|2.3e-1955.45PREDICTED: vacuolar iron transporter 1.1-like [Cucumis melo][more]
gi|659129452|ref|XP_008464694.1|6.6e-1448.45PREDICTED: vacuolar iron transporter 1-like [Cucumis melo][more]
gi|778698101|ref|XP_004142309.2|1.1e-1347.42PREDICTED: vacuolar iron transporter 1-like [Cucumis sativus][more]
gi|823261728|ref|XP_012463599.1|1.5e-1345.92PREDICTED: vacuolar iron transporter 1 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008217Ccc1_fam
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034755 iron ion transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005381 iron ion transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G009370.1CmoCh15G009370.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008217Ccc1 familyPFAMPF01988VIT1coord: 54..142
score: 2.1
NoneNo IPR availablePANTHERPTHR31851FAMILY NOT NAMEDcoord: 51..145
score: 3.0
NoneNo IPR availablePANTHERPTHR31851:SF9SUBFAMILY NOT NAMEDcoord: 51..145
score: 3.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None