CmoCh15G009040 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G009040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionDefensin-like protein 1
LocationCmo_Chr15 : 4563266 .. 4563660 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTATATAAACCCTACCCTCCTTGCATTAAACTCACAACACACAAATTCTTCTATCTATCTCTCTCTCTCTCAGCTCTCTAACTATGAAGTTCCTTTCAGCTGCAATTTGCTTGCTGCTCCTCATTTTTGGCACTGGTTAGTTTGTTTCCTTCAATTTTTTATGTTTTGTTTGTTCATTGGACTGTTTACCAGTGGTGTTTGGTGCATGATGTGTGGGACAGGCATGGCGCCAATGGTTGCAGAGGCCAGGCTTTGCGAAACTCCGAGCGCCAACTTCAGGGGGCTATGCTTTAGTAACAACAACTGTGGCCATGTGTGCAAGGGAGAGGGGTTTAACGATGGCGCTTGCAGGGGCTTCCGCCTTCGCTGCTTATGCTCAAAGCAGTGTGTTTGA

mRNA sequence

CTTATATAAACCCTACCCTCCTTGCATTAAACTCACAACACACAAATTCTTCTATCTATCTCTCTCTCTCTCAGCTCTCTAACTATGAAGTTCCTTTCAGCTGCAATTTGCTTGCTGCTCCTCATTTTTGGCACTGGCATGGCGCCAATGGTTGCAGAGGCCAGGCTTTGCGAAACTCCGAGCGCCAACTTCAGGGGGCTATGCTTTAGTAACAACAACTGTGGCCATGTGTGCAAGGGAGAGGGGTTTAACGATGGCGCTTGCAGGGGCTTCCGCCTTCGCTGCTTATGCTCAAAGCAGTGTGTTTGA

Coding sequence (CDS)

ATGAAGTTCCTTTCAGCTGCAATTTGCTTGCTGCTCCTCATTTTTGGCACTGGCATGGCGCCAATGGTTGCAGAGGCCAGGCTTTGCGAAACTCCGAGCGCCAACTTCAGGGGGCTATGCTTTAGTAACAACAACTGTGGCCATGTGTGCAAGGGAGAGGGGTTTAACGATGGCGCTTGCAGGGGCTTCCGCCTTCGCTGCTTATGCTCAAAGCAGTGTGTTTGA
Homology
[Close]
BLAST of CmoCh15G009040 vs. Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16
Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1 

Query: 2  KFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGACR 61
          K ++    +++L+F TGM   VAEAR CE+ S  F+GLCFS +NCG VC  EGFN G CR
Sbjct: 6  KVIATIFLMMMLVFATGM---VAEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCR 65

Query: 62 GFRLRCLCSKQC 74
          GFR RC C++ C
Sbjct: 66 GFRRRCFCTRHC 74

[Close]
BLAST of CmoCh15G009040 vs. Swiss-Prot
Match: DEF01_ARATH (Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.7e-16
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          ++F+SAA+ L ++   TGM P+  EAR CE+ S  F+G C S +NC +VC  EGF  G C
Sbjct: 5  VRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKC 64

Query: 61 RGFRLRCLCSKQC 74
          RGFR RC C++ C
Sbjct: 65 RGFRRRCYCTRHC 77

[Close]
BLAST of CmoCh15G009040 vs. Swiss-Prot
Match: DEF1_CAPAN (Defensin J1-1 OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.3e-15
Identity = 36/72 (50.00%), Postives = 52/72 (72.22%), Query Frame = 1 

Query: 2  KFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGACR 61
          K ++    ++LL+F T M   +AEA++CE  S NF+GLC S+ +CG+VC+ EGF DG+C 
Sbjct: 6  KVVATIFLMMLLVFATDM---MAEAKICEALSGNFKGLCLSSRDCGNVCRREGFTDGSCI 65

Query: 62 GFRLRCLCSKQC 74
          GFRL+C C+K C
Sbjct: 66 GFRLQCFCTKPC 74

[Close]
BLAST of CmoCh15G009040 vs. Swiss-Prot
Match: DEF02_ARATH (Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.0e-15
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          M+ +SA + + ++   TGM P+  EAR CE+ S  F+G C S +NC +VC  EGF  G C
Sbjct: 5  MRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNC 64

Query: 61 RGFRLRCLCSKQC 74
          RGFR RC C++ C
Sbjct: 65 RGFRRRCFCTRHC 77

[Close]
BLAST of CmoCh15G009040 vs. Swiss-Prot
Match: DEF05_ARATH (Defensin-like protein 5 OS=Arabidopsis thaliana GN=PDF2.4 PE=3 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 6.6e-15
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1 

Query: 4  LSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGACRGF 63
          L++A+ LL +I  T M  +  EAR CET S  F G C S++NC +VC  EGF+DG CRGF
Sbjct: 7  LNSALLLLFMILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGF 66

Query: 64 RLRCLCSKQC 74
          R RCLC++ C
Sbjct: 67 RRRCLCTRPC 76

[Close]
BLAST of CmoCh15G009040 vs. TrEMBL
Match: A0A0A0KJ50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114570 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-23
Identity = 53/74 (71.62%), Postives = 58/74 (78.38%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          M F SAAI LLLL+ GTGM PMV EAR CE+PS  F+GLCFS NNCGHVCK EGF+ G C
Sbjct: 1  MNFFSAAIFLLLLLLGTGMGPMVTEARTCESPSHRFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. TrEMBL
Match: V5LEQ8_CITLA (Defensin-like protein 1 OS=Citrullus lanatus GN=PDF2.1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-23
Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKF SAAI LLLL+  TGM PMV +AR CE+PS +F+GLCFS NNCGHVCK EGF+ G C
Sbjct: 1  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. TrEMBL
Match: V5LF72_CITLA (Defensin-like protein 6 OS=Citrullus lanatus GN=PDF2.6 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.0e-22
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKF SAAI LLLLIFGTGM P+V EAR+CE+ S +F+GLCFS+ NCG++CK EGF  G C
Sbjct: 1  MKFFSAAILLLLLIFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. TrEMBL
Match: V5LFZ0_CITLA (Defensin-like protein 5 OS=Citrullus lanatus GN=PDF2.5 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.9e-22
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKF SAAI LLLLIFGTGM P+V EAR+CE+ S +F+GLCFS+ NCG++CK EGF  G C
Sbjct: 1  MKFFSAAILLLLLIFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKPCV 74

[Close]
BLAST of CmoCh15G009040 vs. TrEMBL
Match: V5LF08_CITLA (Defensin-like protein 4 OS=Citrullus lanatus GN=PDF2.4 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.7e-17
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 1 

Query: 1  MKFL-SAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGA 60
          MKFL     C     FGTGM P+V EAR+CE+ S +F+GLCFS+ NCG++CK EGF  G 
Sbjct: 1  MKFLFQLQFCCCSSFFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGH 60

Query: 61 CRGFRLRCLCSKQCV 75
          CRGFR RC C+K CV
Sbjct: 61 CRGFRRRCFCTKHCV 75

[Close]
BLAST of CmoCh15G009040 vs. TAIR10
Match: AT2G02130.1 (AT2G02130.1 low-molecular-weight cysteine-rich 68)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-17
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          ++F+SAA+ L ++   TGM P+  EAR CE+ S  F+G C S +NC +VC  EGF  G C
Sbjct: 5  VRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKC 64

Query: 61 RGFRLRCLCSKQC 74
          RGFR RC C++ C
Sbjct: 65 RGFRRRCYCTRHC 77

[Close]
BLAST of CmoCh15G009040 vs. TAIR10
Match: AT2G02100.1 (AT2G02100.1 low-molecular-weight cysteine-rich 69)

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-16
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          M+ +SA + + ++   TGM P+  EAR CE+ S  F+G C S +NC +VC  EGF  G C
Sbjct: 5  MRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNC 64

Query: 61 RGFRLRCLCSKQC 74
          RGFR RC C++ C
Sbjct: 65 RGFRRRCFCTRHC 77

[Close]
BLAST of CmoCh15G009040 vs. TAIR10
Match: AT1G61070.1 (AT1G61070.1 low-molecular-weight cysteine-rich 66)

HSP 1 Score: 80.9 bits (198), Expect = 3.7e-16
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1 

Query: 4  LSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGACRGF 63
          L++A+ LL +I  T M  +  EAR CET S  F G C S++NC +VC  EGF+DG CRGF
Sbjct: 7  LNSALLLLFMILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFSDGDCRGF 66

Query: 64 RLRCLCSKQC 74
          R RCLC++ C
Sbjct: 67 RRRCLCTRPC 76

[Close]
BLAST of CmoCh15G009040 vs. TAIR10
Match: AT2G02120.1 (AT2G02120.1 Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 6.3e-16
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          M+ +SA + L+++   TGM P+  EAR C + S  F+G C S+ NC +VC  EGF  G C
Sbjct: 5  MRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFPGGDC 64

Query: 61 RGFRLRCLCSKQC 74
          RGFR RC C++ C
Sbjct: 65 RGFRRRCFCTRNC 77

[Close]
BLAST of CmoCh15G009040 vs. TAIR10
Match: AT2G02140.1 (AT2G02140.1 low-molecular-weight cysteine-rich 72)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-12
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          ++ +SA +  ++L+F TGM P+  EAR CE+PS  F+G+C ++ +C   C  EGF+ G C
Sbjct: 5  LRLISALLMSVMLLFATGMGPV--EARTCESPSNKFQGVCLNSQSCAKACPSEGFSGGRC 64

Query: 61 RGFRLRCLCSKQC 74
              LRC CSK C
Sbjct: 65 SS--LRCYCSKAC 73

[Close]
BLAST of CmoCh15G009040 vs. NCBI nr
Match: gi|449466947|ref|XP_004151187.1| (PREDICTED: defensin Ec-AMP-D2-like [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKF SA I LLLLIFG+GMAPMVAEAR+CE+PS NF+GLCFS+ NCG++CK EGF+ G C
Sbjct: 1  MKFFSAPIFLLLLIFGSGMAPMVAEARVCESPSHNFKGLCFSDTNCGNICKTEGFSGGVC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. NCBI nr
Match: gi|659072682|ref|XP_008466730.1| (PREDICTED: defensin J1-2-like [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24
Identity = 55/74 (74.32%), Postives = 60/74 (81.08%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKFLSAAI LLLL+ GTGM PMV EAR CE+PS  F+GLCFS NNCGHVCK EGF+ G C
Sbjct: 1  MKFLSAAIFLLLLLLGTGMGPMVTEARTCESPSHRFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. NCBI nr
Match: gi|778698443|ref|XP_011654535.1| (PREDICTED: defensin J1-2-like [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 2.9e-23
Identity = 53/74 (71.62%), Postives = 58/74 (78.38%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          M F SAAI LLLL+ GTGM PMV EAR CE+PS  F+GLCFS NNCGHVCK EGF+ G C
Sbjct: 1  MNFFSAAIFLLLLLLGTGMGPMVTEARTCESPSHRFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. NCBI nr
Match: gi|558067078|gb|AHA50470.1| (defensin-like protein 1 [Citrullus lanatus])

HSP 1 Score: 115.5 bits (288), Expect = 3.8e-23
Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKF SAAI LLLL+  TGM PMV +AR CE+PS +F+GLCFS NNCGHVCK EGF+ G C
Sbjct: 1  MKFFSAAILLLLLLLATGMGPMVTDARTCESPSRHFKGLCFSKNNCGHVCKTEGFHGGHC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

[Close]
BLAST of CmoCh15G009040 vs. NCBI nr
Match: gi|558067092|gb|AHA50473.1| (defensin-like protein 6 [Citrullus lanatus])

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-22
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 1 

Query: 1  MKFLSAAICLLLLIFGTGMAPMVAEARLCETPSANFRGLCFSNNNCGHVCKGEGFNDGAC 60
          MKF SAAI LLLLIFGTGM P+V EAR+CE+ S +F+GLCFS+ NCG++CK EGF  G C
Sbjct: 1  MKFFSAAILLLLLIFGTGMEPIVVEARVCESLSHSFKGLCFSSTNCGNICKTEGFTGGVC 60

Query: 61 RGFRLRCLCSKQCV 75
          RGFR RC C+K CV
Sbjct: 61 RGFRRRCFCTKHCV 74

The following BLAST results are available for this feature:
BLAST of CmoCh15G009040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DEF2_CAPAN1.6e-1654.17Defensin J1-2 OS=Capsicum annuum PE=1 SV=1[more]
DEF01_ARATH2.7e-1649.32Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1[more]
DEF1_CAPAN2.3e-1550.00Defensin J1-1 OS=Capsicum annuum PE=1 SV=1[more]
DEF02_ARATH5.0e-1546.58Defensin-like protein 2 OS=Arabidopsis thaliana GN=PDF2.2 PE=2 SV=1[more]
DEF05_ARATH6.6e-1552.86Defensin-like protein 5 OS=Arabidopsis thaliana GN=PDF2.4 PE=3 SV=2[more]
BLAST of CmoCh15G009040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJ50_CUCSA2.1e-2371.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114570 PE=3 SV=1[more]
V5LEQ8_CITLA2.7e-2370.27Defensin-like protein 1 OS=Citrullus lanatus GN=PDF2.1 PE=2 SV=1[more]
V5LF72_CITLA3.0e-2268.92Defensin-like protein 6 OS=Citrullus lanatus GN=PDF2.6 PE=2 SV=1[more]
V5LFZ0_CITLA3.9e-2268.92Defensin-like protein 5 OS=Citrullus lanatus GN=PDF2.5 PE=2 SV=1[more]
V5LF08_CITLA3.7e-1758.67Defensin-like protein 4 OS=Citrullus lanatus GN=PDF2.4 PE=2 SV=1[more]
BLAST of CmoCh15G009040 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02130.11.5e-1749.32 low-molecular-weight cysteine-rich 68[more]
AT2G02100.12.8e-1646.58 low-molecular-weight cysteine-rich 69[more]
AT1G61070.13.7e-1652.86 low-molecular-weight cysteine-rich 66[more]
AT2G02120.16.3e-1646.58 Scorpion toxin-like knottin superfamily protein[more]
AT2G02140.11.5e-1243.84 low-molecular-weight cysteine-rich 72[more]
BLAST of CmoCh15G009040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449466947|ref|XP_004151187.1|2.7e-2472.97PREDICTED: defensin Ec-AMP-D2-like [Cucumis sativus][more]
gi|659072682|ref|XP_008466730.1|2.7e-2474.32PREDICTED: defensin J1-2-like [Cucumis melo][more]
gi|778698443|ref|XP_011654535.1|2.9e-2371.62PREDICTED: defensin J1-2-like [Cucumis sativus][more]
gi|558067078|gb|AHA50470.1|3.8e-2370.27defensin-like protein 1 [Citrullus lanatus][more]
gi|558067092|gb|AHA50473.1|4.2e-2268.92defensin-like protein 6 [Citrullus lanatus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003614Scorpion_toxin-like
IPR008176Defensin_plant
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0050832 defense response to fungus
biological_process GO:0031640 killing of cells of other organism
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G009040.1CmoCh15G009040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003614Knottin, scorpion toxin-likeGENE3DG3DSA:3.30.30.10coord: 27..73
score: 1.4
IPR003614Knottin, scorpion toxin-likeSMARTSM00505gth_4coord: 28..73
score: 7.
IPR003614Knottin, scorpion toxin-likeunknownSSF57095Scorpion toxin-likecoord: 27..73
score: 6.27
IPR008176Defensin, plantPRINTSPR00288PUROTHIONINcoord: 58..72
score: 1.7E-6coord: 28..43
score: 1.
IPR008176Defensin, plantPROSITEPS00940GAMMA_THIONINcoord: 27..50
scor
NoneNo IPR availablePANTHERPTHR33147FAMILY NOT NAMEDcoord: 1..73
score: 6.2
NoneNo IPR availablePANTHERPTHR33147:SF9DEFENSIN-LIKE PROTEIN 1-RELATEDcoord: 1..73
score: 6.2
NoneNo IPR availablePFAMPF00304Gamma-thionincoord: 27..73
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G009040CmaCh04G021630Cucurbita maxima (Rimu)cmacmoB693
CmoCh15G009040MELO3C005214.2Melon (DHL92) v3.6.1cmomedB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G009040Cucurbita moschata (Rifu)cmocmoB262
CmoCh15G009040Cucumber (Gy14) v1cgycmoB1035
CmoCh15G009040Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G009040Wild cucumber (PI 183967)cmocpiB299
CmoCh15G009040Cucumber (Chinese Long) v2cmocuB290
CmoCh15G009040Melon (DHL92) v3.5.1cmomeB240
CmoCh15G009040Watermelon (Charleston Gray)cmowcgB248
CmoCh15G009040Watermelon (97103) v1cmowmB268
CmoCh15G009040Cucurbita pepo (Zucchini)cmocpeB280
CmoCh15G009040Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G009040Bottle gourd (USVL1VR-Ls)cmolsiB256
CmoCh15G009040Cucumber (Gy14) v2cgybcmoB587
CmoCh15G009040Silver-seed gourdcarcmoB0647
CmoCh15G009040Silver-seed gourdcarcmoB1118
CmoCh15G009040Cucumber (Chinese Long) v3cmocucB0351
CmoCh15G009040Watermelon (97103) v2cmowmbB271
CmoCh15G009040Wax gourdcmowgoB0370