CmoCh15G008490 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGTATTGTATTGTATTAATGGAGGAAGGTCCCACACACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTCTTACATTCTCCCAGAAATTTCTCTCTCTATAATCCTCCGCTTCTGTCTCTCTCAACGGCTTCATTTTGAATTTTTTCTGCGTCTTTGAGCTGGAAGACCCTTCGCTTTTTTGGCGTTCGTATTTCTCCGATGCGGTAGTTGAGTTTCTACTTTCGCCCCCACCAAGAACGTTACTCTTTTTGAGGGTTTCCGTGCTTTTCAATCACTGTTTCGTCGCGATTTTAGGTATAATTCCTGCTTTTTTTCGTTCTTTCTTTGTTTTCCTTCGATTTTAATTTTTCTTGTTCTCCGATTATGATGATTTTCTTCCCTTGGACGAGATTTGATGGAATGTGAAGTCTCTGGAAACGTTCCTAACCTGTTTAAATCTTAGATCCATTGTGGAGTTTCTTTGAATTTGAGGGTGGAGTTTTCGATTCTTTTTGTTGTTCTTTAAATAGCTCTGTTCAGATTTCTTGATTTCATATTCTTCAGGGGAAGGGAATTCCATTGTTTCGTTTCATGACGTGCAAATTTATGGATTCCATTAATAAAATACTGATTTCAACCTCGGATTCCTTTTTTTGGAATTCTCTTGATACAGAGTCTGTTTGTTTTGCATGTTATCTGTTGTACTCTTAATGACAGTTCTGAATTCAATTTTTTTAAAAGGAAAGATTGATTCTGTATCAAATTTTGTGCGTATGTTCAGGTGGAGGTATAAAACTGGCCTTGTAAGGATGGCATCTGGAGGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCCCAGAATGAAGATATGATGGACATCAGGGAAACTGTGGACGATCCAGCTCAAAATGAACTTAAACCGAACGTTGCTGTTTCGAGCAGCGTTCGCGATCTCTTGGAATGCCCGGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGGTTTGGTTATGAATTGCTTAGTTCATCTTTATGTGATGTGGTTAACTTTGCAGATTCTATGATTATGGAGGTTTGTTTTTAGTGTTTAACCAAAAAGAAGAAGGATTATAGTTAGAATGAGCTGAGTGAAATGCTTCCTTTTGGAATCTATTATCAATTCTTGTACATTTTGGTCTCTCAAAGTTTTATACCTTTCAAAAGGGATGTGCTTAAGCTTACGGGTGATAGCATTTTCTTTAATGGTGTTCTTTTTTGTTTCTGTAGTGTTCAAATGGTCACACACTGTGTTCTGGTTGCAAGCCTCGGGTGCACAATCGCTGCCCGACGTGCAGGCACGAACTTGGGAATATAAGATGTCTTGCATTGGAGAAGGTGGCTGCATCTCTAGAACTTCCATGTAAATATCAGAGCTATGGCTGCATTGGCATATATCCATATTACAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGCTGTCCATATGCTGGATCGGAATGTTCAGTCGTCGGTGATATACCCTATTTGGTGGCTCACCTGAAAGATGATCATAAAGTAGACATGCACAGTGGAAGCACATTCAACCATCGATACGTAAAATCGAACCCTCAAGAAGTTGAAAACGCTACGTGGATGCTAACGGTAATTTTCCACGCAGACCATACCGTCCACTCTGTTCCTTACTGTATTGGGCAGGAAAATCGCATTGGCATATCTTATGCATATTTTGAGCCATTAAATTCATGTTAGATGCATAAATTTTAGTGATTTAACATTGGCATGAAACCATGCACTTCTTTCGAATTCTTCTGTTAATGGAACTGGGAAATTGAGCATAAGAGATGCTCAATTTGATTTTGCTGTCATATATCAGAAAGTGTACTCCCCTGTAGATTAGACTATTTCTGAAATATTTCTTATTGTTTAGAGCTCGGAGTACCTAAGTAACAGGTATTTGAGTTAGGCTTGTAACCCTGAATAGCTATGCTCGTCTCCTATAAGACTAGATATCCTAAGTAGGTGTAGCCACTTTACTGCATTTGTGGTGACAAATATTTCTTATTGTTTAGAGCTCGGAGTACTTAAGTAACAGGTATTGAGTTAAGTTTGTAACCCCGAGTAGCTATGCTCGTATCCTATGAGACTAGATATCCTGAGTAGGTGTAGCCACTTTAACTGCATTTGTGGTGACAACAATCTCACACCGACCACGTGGAAGAGATTTTGCTAGTTCAGAAATCTAGGGTCCTCATTGTACTATCATTCTGCAAACCTATAGCTTATATTTAGCTTTGAATTCTTGATTGTGGGATGACTCTGATTTAGAATTTTAAAACTCAGGTTTTCAGTTGCTTTGGTCAATACTTTTGCCTGCATTTCGAAGCTTTCCAGCTAGGGATGGCGCCAGTATACATAGCCTTTTTGCGGTTCATGGGGGACGATAACGATGCAAAGAACTACAGCTATAGACTCGAGGTGGGTGGAAATGGGAGGAAGATGGTATGGCAAGGGGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAACGCAACATGGCTCTTTTCTTCTCTGGTGGCGATCGGAAGGAACTAAAGCTTAGGGTGACTGGTAGAATTTGGAAAGAACAGTGATACTTCAAATCTTGGCGAGTGGTCGGTCGGTTGGTTCGTTTTTGTAGAGTAAATGAGGCTTTCTAATCATGTGTTTCTGTTTCTAATTAAGATGCAAACACTTCTTGCTCTTACATGAAACCATGATTTAGAAGAACTTCCCCTCCATTGATGATTATCAATGAAGAACTGAACTTACTCATATTTCCCTGTTGAGTATTAGCGGTATCAGTTATTACCCCATTGCTCCTGTTCAGTCATTGGATCCAGTTTATAAAATTTATGAAAATAATGATTATATGGTTAAATTTGTAAATGACAGGACATTTCATGCTGCCTGCTCAGATGTTTCAAAGACAACACTTGGGAAGAACAGGTTCGATTCCTTGAACTTTTTTTGAAGTGTGCGTGCACAAGTTCTCTTTCGAGTAGTTCGTGTGAATGTACGCAACATGTTCGTAGAATTAATGTGGAGTTGAGTTTCATATGATAGTACAGACTACACATTGTCACTTAACAATGCATAAACTGAAAAACCACAAGTTCTAGAACTGAATTAGGTTAAAACTGGCTTTCATTGGGTACACGAGATGTTATCAGAGCTAATTGGATATCTGTTCTAAGTAGAGTCTTAAGCCAAATATGCATCTCATCCTTGCAGATGATACTCCCAGGCTGCATCCTCTGTTCTAGACAACCCGCACAACATTATTTCCTAAATTCAAGTTAAATTTAGGTGGTCTTAGCTAAATATGCATCCCATCCCTGCAGACGATACTCCCGTGCTGCATCGGCAGGATTTGCTGCCTTTATTATCCCGCGCCCGACTATTATGATATCACTTCCTCTGTCATGGATAACCTGCACAACATTGTTTTCCAAATTCAAGTTACATTATGCTCATGTGCCAATTGATTTGTTTGGATACTCCTAG ATGGAAGAAAACGTTACTCTTTTTGAGGGTTTCCGTGCTTTTCAATCACTGTTTCGTCGCGATTTTAGGTGGAGGTATAAAACTGGCCTTGTAAGGATGGCATCTGGAGGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCCCAGAATGAAGATATGATGGACATCAGGGAAACTGTGGACGATCCAGCTCAAAATGAACTTAAACCGAACGTTGCTGTTTCGAGCAGCGTTCGCGATCTCTTGGAATGCCCGGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGTGTTCAAATGGTCACACACTGTGTTCTGGTTGCAAGCCTCGGGTGCACAATCGCTGCCCGACGTGCAGGCACGAACTTGGGAATATAAGATGTCTTGCATTGGAGAAGGTGGCTGCATCTCTAGAACTTCCATGTAAATATCAGAGCTATGGCTGCATTGGCATATATCCATATTACAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGCTGTCCATATGCTGGATCGGAATGTTCAGTCGTCGGTGATATACCCTATTTGGTGGCTCACCTGAAAGATGATCATAAAGTAGACATGCACAGTGGAAGCACATTCAACCATCGATACGTAAAATCGAACCCTCAAGAAGTTGAAAACGCTACGTGGATGCTAACGGTTTTCAGTTGCTTTGGTCAATACTTTTGCCTGCATTTCGAAGCTTTCCAGCTAGGGATGGCGCCAGTATACATAGCCTTTTTGCGGTTCATGGGGGACGATAACGATGCAAAGAACTACAGCTATAGACTCGAGGTGGGTGGAAATGGGAGGAAGATGGTATGGCAAGGGGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAACGCAACATGGCTCTTTTCTTCTCTGGTGGCGATCGGAAGGAACTAAAGCTTAGGGTGACTGGTAGAATTTGGAAAGAACAGTGATACTTCAAATCTTGGCGAGTGGTCGGTCGGTTGGTTCGTTTTTGTAGAGTAAATGAGGCTTTCTAATCATGTGTTTCTGTTTCTAATTAAGATGCAAACACTTCTTGCTCTTACATGAAACCATGATTTAGAAGAACTTCCCCTCCATTGATGATTATCAATGAAGAACTGAACTTACTCATATTTCCCTGTTGAGTATTAGCGGTATCAGTTATTACCCCATTGCTCCTGTTCAGTCATTGGATCCAGTTTATAAAATTTATGAAAATAATGATTATATGGTTAAATTTGTAAATGACAGGACATTTCATGCTGCCTGCTCAGATGTTTCAAAGACAACACTTGGGAAGAACAGATGATACTCCCAGGCTGCATCCTCTGTTCTAGACAACCCGCACAACATTATTTCCTAAATTCAAGTTAAATTTAGGTGGTCTTAGCTAAATATGCATCCCATCCCTGCAGACGATACTCCCGTGCTGCATCGGCAGGATTTGCTGCCTTTATTATCCCGCGCCCGACTATTATGATATCACTTCCTCTGTCATGGATAACCTGCACAACATTGTTTTCCAAATTCAAGTTACATTATGCTCATGTGCCAATTGATTTGTTTGGATACTCCTAG ATGGAAGAAAACGTTACTCTTTTTGAGGGTTTCCGTGCTTTTCAATCACTGTTTCGTCGCGATTTTAGGTGGAGGTATAAAACTGGCCTTGTAAGGATGGCATCTGGAGGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCCCAGAATGAAGATATGATGGACATCAGGGAAACTGTGGACGATCCAGCTCAAAATGAACTTAAACCGAACGTTGCTGTTTCGAGCAGCGTTCGCGATCTCTTGGAATGCCCGGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGTGTTCAAATGGTCACACACTGTGTTCTGGTTGCAAGCCTCGGGTGCACAATCGCTGCCCGACGTGCAGGCACGAACTTGGGAATATAAGATGTCTTGCATTGGAGAAGGTGGCTGCATCTCTAGAACTTCCATGTAAATATCAGAGCTATGGCTGCATTGGCATATATCCATATTACAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGCTGTCCATATGCTGGATCGGAATGTTCAGTCGTCGGTGATATACCCTATTTGGTGGCTCACCTGAAAGATGATCATAAAGTAGACATGCACAGTGGAAGCACATTCAACCATCGATACGTAAAATCGAACCCTCAAGAAGTTGAAAACGCTACGTGGATGCTAACGGTTTTCAGTTGCTTTGGTCAATACTTTTGCCTGCATTTCGAAGCTTTCCAGCTAGGGATGGCGCCAGTATACATAGCCTTTTTGCGGTTCATGGGGGACGATAACGATGCAAAGAACTACAGCTATAGACTCGAGGTGGGTGGAAATGGGAGGAAGATGGTATGGCAAGGGGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTCGATGGGCTCATTATCCAACGCAACATGGCTCTTTTCTTCTCTGGTGGCGATCGGAAGGAACTAAAGCTTAGGGTGACTGGTAGAATTTGGAAAGAACAGTGA
BLAST of CmoCh15G008490 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 483.4 bits (1243), Expect = 2.0e-135 Identity = 215/261 (82.38%), Postives = 241/261 (92.34%), Query Frame = 1
BLAST of CmoCh15G008490 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 3.8e-134 Identity = 215/258 (83.33%), Postives = 237/258 (91.86%), Query Frame = 1
BLAST of CmoCh15G008490 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 1.6e-132 Identity = 214/260 (82.31%), Postives = 237/260 (91.15%), Query Frame = 1
BLAST of CmoCh15G008490 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 5.3e-128 Identity = 206/264 (78.03%), Postives = 231/264 (87.50%), Query Frame = 1
BLAST of CmoCh15G008490 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.1e-125 Identity = 203/258 (78.68%), Postives = 226/258 (87.60%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TrEMBL
Match: A0A0A0KQG8_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_5G456720 PE=3 SV=1) HSP 1 Score: 637.5 bits (1643), Expect = 9.2e-180 Identity = 297/305 (97.38%), Postives = 300/305 (98.36%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TrEMBL
Match: A0A067KWI1_JATCU (E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_24516 PE=3 SV=1) HSP 1 Score: 617.5 bits (1591), Expect = 9.9e-174 Identity = 282/305 (92.46%), Postives = 298/305 (97.70%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TrEMBL
Match: B9RGC2_RICCO (E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_1452850 PE=3 SV=1) HSP 1 Score: 612.5 bits (1578), Expect = 3.2e-172 Identity = 279/305 (91.48%), Postives = 296/305 (97.05%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TrEMBL
Match: A5CAJ5_VITVI (E3 ubiquitin-protein ligase OS=Vitis vinifera GN=VIT_13s0139g00150 PE=3 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 6.0e-171 Identity = 279/305 (91.48%), Postives = 294/305 (96.39%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TrEMBL
Match: E5GCK0_CUCME (E3 ubiquitin-protein ligase OS=Cucumis melo subsp. melo PE=3 SV=1) HSP 1 Score: 603.2 bits (1554), Expect = 1.9e-169 Identity = 277/305 (90.82%), Postives = 295/305 (96.72%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains) HSP 1 Score: 479.2 bits (1232), Expect = 2.1e-135 Identity = 215/258 (83.33%), Postives = 237/258 (91.86%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains) HSP 1 Score: 473.8 bits (1218), Expect = 8.9e-134 Identity = 214/260 (82.31%), Postives = 237/260 (91.15%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2) HSP 1 Score: 458.8 bits (1179), Expect = 3.0e-129 Identity = 206/264 (78.03%), Postives = 231/264 (87.50%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains) HSP 1 Score: 451.1 bits (1159), Expect = 6.2e-127 Identity = 203/258 (78.68%), Postives = 226/258 (87.60%), Query Frame = 1
BLAST of CmoCh15G008490 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein) HSP 1 Score: 381.7 bits (979), Expect = 4.6e-106 Identity = 171/204 (83.82%), Postives = 191/204 (93.63%), Query Frame = 1
BLAST of CmoCh15G008490 vs. NCBI nr
Match: gi|659072446|ref|XP_008465631.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis melo]) HSP 1 Score: 637.9 bits (1644), Expect = 1.0e-179 Identity = 298/305 (97.70%), Postives = 300/305 (98.36%), Query Frame = 1
BLAST of CmoCh15G008490 vs. NCBI nr
Match: gi|449452012|ref|XP_004143754.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis sativus]) HSP 1 Score: 637.5 bits (1643), Expect = 1.3e-179 Identity = 297/305 (97.38%), Postives = 300/305 (98.36%), Query Frame = 1
BLAST of CmoCh15G008490 vs. NCBI nr
Match: gi|802574058|ref|XP_012068636.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X1 [Jatropha curcas]) HSP 1 Score: 619.4 bits (1596), Expect = 3.7e-174 Identity = 283/310 (91.29%), Postives = 300/310 (96.77%), Query Frame = 1
BLAST of CmoCh15G008490 vs. NCBI nr
Match: gi|802574062|ref|XP_012068638.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5-like isoform X2 [Jatropha curcas]) HSP 1 Score: 617.5 bits (1591), Expect = 1.4e-173 Identity = 282/305 (92.46%), Postives = 298/305 (97.70%), Query Frame = 1
BLAST of CmoCh15G008490 vs. NCBI nr
Match: gi|1000979549|ref|XP_015570744.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Ricinus communis]) HSP 1 Score: 612.5 bits (1578), Expect = 4.6e-172 Identity = 279/305 (91.48%), Postives = 296/305 (97.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |