CmoCh15G008190 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G008190
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA helicase
LocationCmo_Chr15 : 4097499 .. 4106167 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCTAAGAGAAGTGGAACCTATCTCGGGCCTGGACCTAGAAGGGGAAGAAGAAGAGTCGCTCAGAACACTGATGTCCCGTCTCCTGAGGCGGAACAACCTGTACCTGAACCTCAAGAGGAGGTTGAAGAAATGCCTGAATGGTTTGAATGTCCTATACCACGGGCACCAAGGTCAGGAATGAGTCAGAGGAGAGCAGTGACTCAAGATTTACCGGACGCAGACTCTACTGCTCCTTCTCCTGAAGCGGTCCCATCAGTGCCCACCGATAACGTGGAGGTTCCACCTAGACAACCAACAACTATCCTCACTACAGATGTAGTACAGTCTTTTATGTTAACCTCTATGGAAAACCAAGCTCAAATGGCTCAGATGATGCAAACACTGGTCACTAACCAGGCCATGATGCAACAGGCCATTCAACAGGCAACGCTGCAACAGACAACATTACAACAGACAGCGATGCAACAGGCAGCTACGCAACAGGTAGCAATACAACAGACAGCATTGCTGGGAAACAGAGACTCTGGAACTATGACCATAGAGGCTCGTTATCTTAAGGATTTTCAGAGGCAGAAACCGCCTTCCTTCGAAGGTGGCAAAATAGATCCTATTGCAGCAGAAAATTGGCTAGAGGCCATGGAAAAAGCCTTCTTTTACATGAACTGTCCGCTGGAATATCAGGTTCACTGCGGAACGTATATGTTGGAAGGAGAGGCTCATTTGTGGTGGAAGGGTGCTAAGAAGTTGATTGCACCTCTTGGAGAGCCTATCTCTTGGCCTCAGTTCAAAGAGGCTTACCTCCGCAAATATTATCCAGTCGCTGCTAGAATGAAGCTGCAAGCAGCATTTCATGAACTCAAACAGGGTGACCTATCTGTGGAGGATTATGATCAGGAGTTTAATAGATTGTCTAGATTCTCTCCTATATATGTCAGTACTGAAGAGCTTAAGGCTGAACGTTTTATCGCCGGCCTAAGGGAGAACATTAGAGGTTATGTGGCATCACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

ATGGCACCTAAGAGAAGTGGAACCTATCTCGGGCCTGGACCTAGAAGGGGAAGAAGAAGAGTCGCTCAGAACACTGATGTCCCGTCTCCTGAGGCGGAACAACCTGTACCTGAACCTCAAGAGGAGGTTGAAGAAATGCCTGAATGGTTTGAATGTCCTATACCACGGGCACCAAGGTCAGGAATGAGTCAGAGGAGAGCAGTGACTCAAGATTTACCGGACGCAGACTCTACTGCTCCTTCTCCTGAAGCGGTCCCATCAGTGCCCACCGATAACGTGGAGGTTCCACCTAGACAACCAACAACTATCCTCACTACAGATGTAGTACAGTCTTTTATGTTAACCTCTATGGAAAACCAAGCTCAAATGGCTCAGATGATGCAAACACTGGTCACTAACCAGGCCATGATGCAACAGGCCATTCAACAGGCAACGCTGCAACAGACAACATTACAACAGACAGCGATGCAACAGGCAGCTACGCAACAGGTAGCAATACAACAGACAGCATTGCTGGGAAACAGAGACTCTGGAACTATGACCATAGAGGCTCGTTATCTTAAGGATTTTCAGAGGCAGAAACCGCCTTCCTTCGAAGGTGGCAAAATAGATCCTATTGCAGCAGAAAATTGGCTAGAGGCCATGGAAAAAGCCTTCTTTTACATGAACTGTCCGCTGGAATATCAGGTTCACTGCGGAACGTATATGTTGGAAGGAGAGGCTCATTTGTGGTGGAAGGGTGCTAAGAAGTTGATTGCACCTCTTGGAGAGCCTATCTCTTGGCCTCAGTTCAAAGAGGCTTACCTCCGCAAATATTATCCAGTCGCTGCTAGAATGAAGCTGCAAGCAGCATTTCATGAACTCAAACAGGGTGACCTATCTGTGGAGGATTATGATCAGGAGTTTAATAGATTGTCTAGATTCTCTCCTATATATGTCAGTACTGAAGAGCTTAAGGCTGAACGTTTTATCGCCGGCCTAAGGGAGAACATTAGAGTCCATCACATTTTGAACCTTCATGGCTCACCACCTTATCTGATCAACGGTCCACCGTGCATTCACGTCAACGACCGAGCCCGGAATCGAACGTTCGAGCTTTCGAGAACAGGCACAATCGTTAAAGAAGCAGTGATTCAGATTTACTCAACCTCTCCTAATTGCAGAATCCTAATCTGTGCTCCTAAAAACTCAACATGTGATGAGCTGATGATATCTTTGAAGAAGGTGATTCCCGAGTCCAACATGTTTCGTGCTATCGCCGCTTTTCGAGAGCGAGACGATGTACCATACGACATATTGTCTTCGTGTTATTACAACGAGGACGAGCAGTGTTTCAGTTCTCCAATACTCGACAAGCTCCGCGAATACAAGATTATATTCTCGACGTACATGAGTAGCTTCCGACTACATGCTAAAGGCTTGGCTGCTGGACATTTCAACCATATTTTCTTGCTCGATGCATCGGCAGCTATCGAGCCAGAGACGTTGGTGCCTTTGACTAAGTTTGCTACAAATGCAACCAGTGTTATAGTTACTGGACAGACAGGGAACCAACCTAATGTTCGGTCAACAATCGGTCGAAGAAATGGATTGAAGACATCATATTTTGAAAGACTTGAGCTAAGCTTGCCATATATAGACCTTAATCCTCTATTCATTTCAGGCTTAGAGGAACAGACAGGAAGTAATGGCGAAGTTGTTGGGTTGACCGGTACATATATGTATTAA

Coding sequence (CDS)

ATGGCACCTAAGAGAAGTGGAACCTATCTCGGGCCTGGACCTAGAAGGGGAAGAAGAAGAGTCGCTCAGAACACTGATGTCCCGTCTCCTGAGGCGGAACAACCTGTACCTGAACCTCAAGAGGAGGTTGAAGAAATGCCTGAATGGTTTGAATGTCCTATACCACGGGCACCAAGGTCAGGAATGAGTCAGAGGAGAGCAGTGACTCAAGATTTACCGGACGCAGACTCTACTGCTCCTTCTCCTGAAGCGGTCCCATCAGTGCCCACCGATAACGTGGAGGTTCCACCTAGACAACCAACAACTATCCTCACTACAGATGTAGTACAGTCTTTTATGTTAACCTCTATGGAAAACCAAGCTCAAATGGCTCAGATGATGCAAACACTGGTCACTAACCAGGCCATGATGCAACAGGCCATTCAACAGGCAACGCTGCAACAGACAACATTACAACAGACAGCGATGCAACAGGCAGCTACGCAACAGGTAGCAATACAACAGACAGCATTGCTGGGAAACAGAGACTCTGGAACTATGACCATAGAGGCTCGTTATCTTAAGGATTTTCAGAGGCAGAAACCGCCTTCCTTCGAAGGTGGCAAAATAGATCCTATTGCAGCAGAAAATTGGCTAGAGGCCATGGAAAAAGCCTTCTTTTACATGAACTGTCCGCTGGAATATCAGGTTCACTGCGGAACGTATATGTTGGAAGGAGAGGCTCATTTGTGGTGGAAGGGTGCTAAGAAGTTGATTGCACCTCTTGGAGAGCCTATCTCTTGGCCTCAGTTCAAAGAGGCTTACCTCCGCAAATATTATCCAGTCGCTGCTAGAATGAAGCTGCAAGCAGCATTTCATGAACTCAAACAGGGTGACCTATCTGTGGAGGATTATGATCAGGAGTTTAATAGATTGTCTAGATTCTCTCCTATATATGTCAGTACTGAAGAGCTTAAGGCTGAACGTTTTATCGCCGGCCTAAGGGAGAACATTAGAGTCCATCACATTTTGAACCTTCATGGCTCACCACCTTATCTGATCAACGGTCCACCGTGCATTCACGTCAACGACCGAGCCCGGAATCGAACGTTCGAGCTTTCGAGAACAGGCACAATCGTTAAAGAAGCAGTGATTCAGATTTACTCAACCTCTCCTAATTGCAGAATCCTAATCTGTGCTCCTAAAAACTCAACATGTGATGAGCTGATGATATCTTTGAAGAAGGTGATTCCCGAGTCCAACATGTTTCGTGCTATCGCCGCTTTTCGAGAGCGAGACGATGTACCATACGACATATTGTCTTCGTGTTATTACAACGAGGACGAGCAGTGTTTCAGTTCTCCAATACTCGACAAGCTCCGCGAATACAAGATTATATTCTCGACGTACATGAGTAGCTTCCGACTACATGCTAAAGGCTTGGCTGCTGGACATTTCAACCATATTTTCTTGCTCGATGCATCGGCAGCTATCGAGCCAGAGACGTTGGTGCCTTTGACTAAGTTTGCTACAAATGCAACCAGTGTTATAGTTACTGGACAGACAGGGAACCAACCTAATGTTCGGTCAACAATCGGTCGAAGAAATGGATTGAAGACATCATATTTTGAAAGACTTGAGCTAAGCTTGCCATATATAGACCTTAATCCTCTATTCATTTCAGGCTTAGAGGAACAGACAGGAAGTAATGGCGAAGTTGTTGGGTTGACCGGTACATATATGTATTAA
Homology
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BLAST of CmoCh15G008190 vs. Swiss-Prot
Match: SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.6e-28
Identity = 86/277 (31.05%), Postives = 140/277 (50.54%), Query Frame = 1 

Query: 304 RLSRFSPIYVSTEELKAERFIAGLRENIRVHHILNLHGSPPYLINGPPCIHVNDRARNRT 363
           R+ +  P    +  L AE+  +       +  +L   G+PPY+I+GPP            
Sbjct: 383 RMIKTKPFVPISPALNAEQICS-------IEMVLGCKGAPPYVIHGPP------------ 442

Query: 364 FELSRTGTIVKEAVIQIYSTSPNCRILICAPKNSTCD---ELMISLKKV-IPESNMFRAI 423
               +T T+V EA++Q+Y+T  N R+L+CAP NS  D   E ++ L+ V I ++ +FR  
Sbjct: 443 -GTGKTMTLV-EAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLN 502

Query: 424 AAFRERDDVPYDILSSCYYNEDEQCFSSPILDKLREYKIIFSTYMSSFRLHAKGLAAGHF 483
           AA R  +++  +I+  C++  DE  F  P L  L  YK++ STYMS+  L+A+G+  GHF
Sbjct: 503 AATRSYEEIKPEIIRFCFF--DELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHF 562

Query: 484 NHIFLLDASAAIEPETLVPLTKFATNATSVIVTGQTGN-QPNVRSTIGRRNGLKTSYFER 543
            HI L +A  A EPE ++ ++      T V++ G      P + S      GL  SY ER
Sbjct: 563 THILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLER 622

Query: 544 LELSLPYIDLNPLFISGLEEQTGSNGEVVGLTGTYMY 576
           L     Y + +  +++ L +    + E++ L     Y
Sbjct: 623 LFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFY 636

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BLAST of CmoCh15G008190 vs. Swiss-Prot
Match: MOV10_CHICK (Putative helicase MOV-10 OS=Gallus gallus GN=MOV10 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-19
Identity = 68/219 (31.05%), Postives = 109/219 (49.77%), Query Frame = 1 

Query: 334 HHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILICA 393
           H +  +    PYLI GPP                +T T+V EA+ Q++S   + RIL CA
Sbjct: 501 HIVTGMSRPAPYLIFGPP-------------GTGKTVTLV-EAIKQVWSCFKDARILACA 560

Query: 394 PKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDKL 453
           P NS  D L   L   I    ++R +A+     DVP D+   C +++ E+C+  P    L
Sbjct: 561 PSNSAADLLCQRLLTNIAPRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLL 620

Query: 454 REYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFAT--------N 513
           + Y+I+ +T +++ RL +     G+F+H+F+ +   A+EPE++V +    T        N
Sbjct: 621 KPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNPN 680

Query: 514 ATSVIVTG---QTGNQPNVRSTIGRRNGLKTSYFERLEL 542
              +++ G   Q G  P  RS +  ++GL TS  ERL L
Sbjct: 681 GGQLVLAGDPQQLGPVP--RSPLAAQHGLGTSLLERLML 703

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BLAST of CmoCh15G008190 vs. Swiss-Prot
Match: MOV10_BOVIN (Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-17
Identity = 76/244 (31.15%), Postives = 119/244 (48.77%), Query Frame = 1 

Query: 306 SRFSPIYVSTEELKA-ERFIAGLRENIRV--HHILNLHGSPPYLINGPPCIHVNDRARNR 365
           SR  P+  S  +LK  +R +    E ++   H ++      PY+I GPP           
Sbjct: 478 SRGVPLLPSDVKLKLYDRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPP----------- 537

Query: 366 TFELSRTGTIVKEAVIQIYSTSPNCRILICAPKNSTCDELMISLKKVIPESNMFRAIAAF 425
                +T T+V EA+ Q+    P   IL CAP NS  D L   L+  +P S+++R +A  
Sbjct: 538 --GTGKTVTLV-EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLP-SSIYRLLAPS 597

Query: 426 RERDDVPYDILSSCYYNEDEQCFSSPILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHI 485
           R+   VP DI   C ++  +  F  P   KL+EY+++ +T +++ RL +      HF HI
Sbjct: 598 RDIHLVPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVLITTLITASRLVSAQFPIDHFTHI 657

Query: 486 FLLDASAAIEPETLVPL-----TKFATNATSVIVTGQTGNQ--PNVRSTIGRRNGLKTSY 540
           F+ +A  A+EPE+LV +      K A N    +V      Q  P +R  + +++GL  S 
Sbjct: 658 FIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSL 706

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BLAST of CmoCh15G008190 vs. Swiss-Prot
Match: M10L1_HUMAN (RNA helicase Mov10l1 OS=Homo sapiens GN=MOV10L1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-16
Identity = 74/229 (32.31%), Postives = 110/229 (48.03%), Query Frame = 1 

Query: 319 KAERFIAGLREN--IRVHHILNLHGSP-PYLINGPPCIHVNDRARNRTFELSRTGTIVKE 378
           K E F   L EN  + V  IL+    P PY++ GPP                +T TI+ E
Sbjct: 737 KMEFFNPVLNENQKLAVKRILSGDCRPLPYILFGPP-------------GTGKTVTII-E 796

Query: 379 AVIQIYSTSPNCRILICAPKNSTCDELMISL--KKVIPESNMFRAIAAFRERDDVPYDIL 438
           AV+Q++   P+ RIL+CAP NS  D + + L   KV+  + M R  A  R  + V   + 
Sbjct: 797 AVLQVHFALPDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVK 856

Query: 439 SSCYYNEDEQCFSSPILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEP 498
             C   ED        + K   ++II +T  SS   +  G+  GHF H+F+ +A  A EP
Sbjct: 857 PYCRDGED--------IWKASRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEP 916

Query: 499 ETLVPLTKFATNATSVIVTG---QTGNQPNVRSTIGRRNGLKTSYFERL 540
           E L+PL   +  +  +++ G   Q G  P ++S +    GL  S+ ERL
Sbjct: 917 ECLIPLGLMSDISGQIVLAGDPMQLG--PVIKSRLAMAYGLNVSFLERL 941

[Close]
BLAST of CmoCh15G008190 vs. Swiss-Prot
Match: MOV10_HUMAN (Putative helicase MOV-10 OS=Homo sapiens GN=MOV10 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-16
Identity = 75/244 (30.74%), Postives = 118/244 (48.36%), Query Frame = 1 

Query: 310 PIYVSTEELKA-ERFIAGLRENIR-VHHILNLHGSP-PYLINGPPCIHVNDRARNRTFEL 369
           P+  S  +LK  +R +    E ++ + HI+     P PY+I GPP               
Sbjct: 482 PLLPSDVKLKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPP-------------GT 541

Query: 370 SRTGTIVKEAVIQIYSTSPNCRILICAPKNSTCDELMISLKKVIPESNMFRAIAAFRERD 429
            +T T+V EA+ Q+    P   IL CAP NS  D L   L+  +P S+++R +A  R+  
Sbjct: 542 GKTVTLV-EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLP-SSIYRLLAPSRDIR 601

Query: 430 DVPYDILSSCYYNEDEQCFSSPILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLD 489
            VP DI   C ++  +  +  P   KL+EY+++ +T +++ RL +      HF HIF+ +
Sbjct: 602 MVPEDIKPCCNWDAKKGEYVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDE 661

Query: 490 ASAAIEPETLVPLTKFATNATSVIVTGQTGNQ-----------PNVRSTIGRRNGLKTSY 540
           A   +EPE+LV +         V  TG  G Q           P +RS + +++GL  S 
Sbjct: 662 AGHCMEPESLVAI----AGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSL 706

[Close]
BLAST of CmoCh15G008190 vs. TrEMBL
Match: A0A0D2NGP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G015200 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.5e-62
Identity = 126/235 (53.62%), Postives = 168/235 (71.49%), Query Frame = 1 

Query: 327 LRENIRVHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPN 386
           L E   VH ILN+ G PP+L+ GP C   N  + + + +LSRTG +VKEAV+Q Y   P 
Sbjct: 510 LDEKSAVHRILNIRGPPPFLVKGPLCATFNGNSESISEQLSRTGLVVKEAVLQTYLRHPQ 569

Query: 387 CRILICAPKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFS 446
            +IL+CAP N TCD L  SLKK IP S++FRA AAFRE + VP DIL SC Y  D +CFS
Sbjct: 570 SKILVCAPINRTCDVLTRSLKKDIPASDIFRANAAFREIEGVPIDILPSCLYKWDAECFS 629

Query: 447 SPILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNA 506
            P L KLRE+++IFST+ SS+RL+  G++AGHF+HIFL+DAS+A EPETLV    FA ++
Sbjct: 630 CPSLHKLREFRVIFSTFASSYRLYNAGISAGHFSHIFLVDASSATEPETLVAFANFADDS 689

Query: 507 TSVIVTGQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGLEEQT 561
           T+VIVTG  GN+ + VRS I R+ GL+ SYFERL    P+ + +P+FI+ L++++
Sbjct: 690 TTVIVTGAPGNRSSTVRSDIARQKGLRISYFERLYKLSPFKNDDPMFIAQLKDRS 744

[Close]
BLAST of CmoCh15G008190 vs. TrEMBL
Match: A0A0B0N7Z6_GOSAR (Putative RNA helicase SDE3-like protein OS=Gossypium arboreum GN=F383_16055 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.1e-61
Identity = 124/235 (52.77%), Postives = 166/235 (70.64%), Query Frame = 1 

Query: 327 LRENIRVHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPN 386
           L E   VH ILN+   PP+L+ GP C   N  + + + +LSRTG +VKEAV+QIY   P 
Sbjct: 444 LDEKSAVHRILNIRAPPPFLVKGPLCATFNGNSESISKQLSRTGLVVKEAVLQIYRRHPQ 503

Query: 387 CRILICAPKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFS 446
            +IL+CAP NSTCD L  SLK  IP S++FRA AAFRE + VP DIL SC Y  D +CFS
Sbjct: 504 SKILVCAPINSTCDVLTRSLKIDIPASDIFRANAAFREIEGVPIDILPSCLYKRDTKCFS 563

Query: 447 SPILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNA 506
            P L +LRE+++IFST+ SS+RL+  G++AGHF+HIFL+DAS++ EPETLV L  FA ++
Sbjct: 564 CPSLHELREFRVIFSTFTSSYRLYNAGISAGHFSHIFLVDASSSTEPETLVALANFADDS 623

Query: 507 TSVIVTGQTGN-QPNVRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGLEEQT 561
           T+VI+TG  GN    VRS I R  GL+ SYFERL    P+ + +P+FI+ L++++
Sbjct: 624 TTVIITGAPGNCSSTVRSDIAREKGLRISYFERLCKLSPFKNDDPMFIAQLKDRS 678

[Close]
BLAST of CmoCh15G008190 vs. TrEMBL
Match: W9RLB4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023123 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 129/226 (57.08%), Postives = 159/226 (70.35%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILIC 392
           V  I ++  SPPYLI GP C     +A +     SRTG +++EAVIQ   TSP+ RILIC
Sbjct: 413 VRQISSIQSSPPYLIAGPMCAS-EAKAASHLRVPSRTGVVIREAVIQTLKTSPHYRILIC 472

Query: 393 APKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDK 452
           +  NS CD LM  LKK IP+S MFRA AAFRE++DVP DILSS  Y  +E+CF  P L+ 
Sbjct: 473 SHSNSACDVLMRGLKKTIPKSQMFRANAAFREKEDVPADILSSSLY--EEECFICPPLET 532

Query: 453 LREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVIVT 512
           LRE+K+IFST++S FRLH +GL  GHF+HIF++DAS AIEPE +VPL  FA   T V+VT
Sbjct: 533 LREFKVIFSTFVSCFRLHNEGLPVGHFSHIFMVDASFAIEPEAMVPLANFADKNTVVVVT 592

Query: 513 GQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGLE 558
           G+ G+ P  VRS IGRR GLKTSYFERL    PY  L+P FI+ L+
Sbjct: 593 GEVGSSPGWVRSDIGRRKGLKTSYFERLRKFSPYHSLSPSFITQLD 635

[Close]
BLAST of CmoCh15G008190 vs. TrEMBL
Match: M5XLH8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002317mg PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 131/227 (57.71%), Postives = 162/227 (71.37%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILIC 392
           V  IL++ GSPPYL+ G  C+  N       F  SRTG +V EAV Q+  TS   RILIC
Sbjct: 470 VRQILSIKGSPPYLVAGQLCVERN------VFRPSRTGAVVCEAVHQLCQTSLKNRILIC 529

Query: 393 APKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDK 452
           AP NS CD +M SL KVIPES+MFRA AAFRE+D+VP DIL SC Y  ++  FS P  +K
Sbjct: 530 APSNSCCDGIMRSLLKVIPESDMFRANAAFREKDEVPDDILPSCLY--EDPYFSCPPTEK 589

Query: 453 LREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVIVT 512
           L+++++IFST MSSFRLH KGL +GHF+HIFL+DAS+AIEPET V LT FA  +T+VIVT
Sbjct: 590 LKKFRVIFSTLMSSFRLHDKGLTSGHFSHIFLVDASSAIEPETAVALTNFAEKSTTVIVT 649

Query: 513 GQTG-NQPNVRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGLEE 559
           GQ G N   VR+ + R+ GLK SYFERL  S PY  LNP+ I+ L++
Sbjct: 650 GQPGDNSRWVRADMARQKGLKISYFERLLKSRPYRSLNPMLITQLDQ 688

[Close]
BLAST of CmoCh15G008190 vs. TrEMBL
Match: A0A068U9J3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019651001 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.1e-58
Identity = 124/234 (52.99%), Postives = 159/234 (67.95%), Query Frame = 1 

Query: 328 RENIRVHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNC 387
           + N  VH IL L G+PPYL+ GP CI   DR       LSRTG ++ EA +QI    P+ 
Sbjct: 487 KANFVVHQILRLQGAPPYLVEGPMCIE-RDR-------LSRTGVVIVEAALQILRLDPSK 546

Query: 388 RILICAPKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSS 447
           +IL+CAP N TCD LM  LKK I +S+MFRA AAFRE D +P DIL SC Y    +CFS 
Sbjct: 547 KILLCAPINRTCDLLMRGLKKEISDSDMFRANAAFRELDGIPVDILPSCLYESQTECFSC 606

Query: 448 PILDKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNAT 507
           P L++L ++KII ST+MSSF+LH++G+  GHF+HIFL+DAS+A EPET+VPL  FA + T
Sbjct: 607 PSLEELGKFKIILSTFMSSFKLHSEGVKVGHFSHIFLVDASSATEPETMVPLANFANDKT 666

Query: 508 SVIVTGQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGLEEQT 561
            V+VTG   N    +RS I R NGL TSYFERL  S  Y +L+P  I+ L++ +
Sbjct: 667 IVVVTGAPRNHSGWIRSKIARENGLLTSYFERLRKSDLYNELDPKVITQLDDNS 712

[Close]
BLAST of CmoCh15G008190 vs. TAIR10
Match: AT1G05460.1 (AT1G05460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-29
Identity = 86/277 (31.05%), Postives = 140/277 (50.54%), Query Frame = 1 

Query: 304 RLSRFSPIYVSTEELKAERFIAGLRENIRVHHILNLHGSPPYLINGPPCIHVNDRARNRT 363
           R+ +  P    +  L AE+  +       +  +L   G+PPY+I+GPP            
Sbjct: 383 RMIKTKPFVPISPALNAEQICS-------IEMVLGCKGAPPYVIHGPP------------ 442

Query: 364 FELSRTGTIVKEAVIQIYSTSPNCRILICAPKNSTCD---ELMISLKKV-IPESNMFRAI 423
               +T T+V EA++Q+Y+T  N R+L+CAP NS  D   E ++ L+ V I ++ +FR  
Sbjct: 443 -GTGKTMTLV-EAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLN 502

Query: 424 AAFRERDDVPYDILSSCYYNEDEQCFSSPILDKLREYKIIFSTYMSSFRLHAKGLAAGHF 483
           AA R  +++  +I+  C++  DE  F  P L  L  YK++ STYMS+  L+A+G+  GHF
Sbjct: 503 AATRSYEEIKPEIIRFCFF--DELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHF 562

Query: 484 NHIFLLDASAAIEPETLVPLTKFATNATSVIVTGQTGN-QPNVRSTIGRRNGLKTSYFER 543
            HI L +A  A EPE ++ ++      T V++ G      P + S      GL  SY ER
Sbjct: 563 THILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLER 622

Query: 544 LELSLPYIDLNPLFISGLEEQTGSNGEVVGLTGTYMY 576
           L     Y + +  +++ L +    + E++ L     Y
Sbjct: 623 LFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFY 636

[Close]
BLAST of CmoCh15G008190 vs. NCBI nr
Match: gi|1009146795|ref|XP_015891062.1| (PREDICTED: probable RNA helicase SDE3 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 253.4 bits (646), Expect = 9.2e-64
Identity = 132/225 (58.67%), Postives = 166/225 (73.78%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILIC 392
           V  IL++ GSPPYL++GP C+    +  + +  LS+TG +V EA++QIY +SP CRIL+ 
Sbjct: 403 VGQILSIKGSPPYLVSGPLCV-AERKVFSHSTNLSKTGLLVHEAIVQIYKSSPECRILLS 462

Query: 393 APKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDK 452
           AP NS CD LM SL KVIPESNMFRA AAFR  D+VP DILSSC Y   E+CF+ P L+K
Sbjct: 463 APSNSACDALMRSLMKVIPESNMFRANAAFRGIDEVPDDILSSCLYK--EECFACPSLEK 522

Query: 453 LREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVIVT 512
           L ++K+IFST+MSS+RLH++G+AAGHF+HIFL+DAS AIEPE LV L  FA   T+V+VT
Sbjct: 523 LLKFKVIFSTFMSSYRLHSEGIAAGHFSHIFLVDASFAIEPEALVTLANFADKNTAVVVT 582

Query: 513 GQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGL 557
           G+ GN  + VRS IGR+ GLK SYFERL    PY   NP F + L
Sbjct: 583 GKPGNSSSWVRSEIGRKKGLKISYFERLCECRPYRTPNPKFFADL 624

[Close]
BLAST of CmoCh15G008190 vs. NCBI nr
Match: gi|1009173119|ref|XP_015867642.1| (PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba])

HSP 1 Score: 252.3 bits (643), Expect = 2.0e-63
Identity = 132/225 (58.67%), Postives = 166/225 (73.78%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILIC 392
           V  IL++ GSPPYL++GP C+    +  + +  LS+TG +V EA++QIY +SP CRIL+ 
Sbjct: 488 VSQILSIKGSPPYLVSGPLCV-AERKVFSHSNNLSKTGLLVFEAIVQIYKSSPECRILLS 547

Query: 393 APKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDK 452
           AP NS CD LM SL KVIPESNMFRA AAFR  D+VP DILSSC Y E+  CF+ P L+K
Sbjct: 548 APSNSACDVLMRSLMKVIPESNMFRANAAFRGIDEVPDDILSSCLYKEE--CFACPSLEK 607

Query: 453 LREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVIVT 512
           L ++K+IFST+MSS+RLH++G+AAGHF+HIFL+DAS AIEPE LV L  FA   T+V+VT
Sbjct: 608 LLKFKVIFSTFMSSYRLHSEGIAAGHFSHIFLVDASFAIEPEALVTLANFADKNTAVVVT 667

Query: 513 GQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGL 557
           G+ GN  + VRS IGR+ GLK SYFERL    PY   NP F + L
Sbjct: 668 GKPGNSSSWVRSEIGRKKGLKISYFERLCECRPYRTPNPKFFADL 709

[Close]
BLAST of CmoCh15G008190 vs. NCBI nr
Match: gi|1009173117|ref|XP_015867641.1| (PREDICTED: probable RNA helicase SDE3, partial [Ziziphus jujuba])

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 132/225 (58.67%), Postives = 166/225 (73.78%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILIC 392
           V  IL++ GSPPYL++GP C+    +  + +  LS+TG +V EA++QIY +SP CRIL+ 
Sbjct: 91  VGQILSIKGSPPYLVSGPLCV-AERKVFSHSNNLSKTGLLVFEAIVQIYKSSPECRILLS 150

Query: 393 APKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDK 452
           AP NS CD LM SL KVIPESNMFRA AAFR  D+VP DILSSC Y E+  CF+ P L+K
Sbjct: 151 APSNSACDVLMRSLMKVIPESNMFRANAAFRGIDEVPDDILSSCLYKEE--CFACPSLEK 210

Query: 453 LREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVIVT 512
           L ++K+IFST+MSS+RLH++G+AAGHF+HIFL+DAS AIEPE LV L  FA   T+V+VT
Sbjct: 211 LLKFKVIFSTFMSSYRLHSEGIAAGHFSHIFLVDASFAIEPEALVTLANFADKNTAVVVT 270

Query: 513 GQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGL 557
           G+ GN  + VRS IGR+ GLK SYFERL    PY   NP F + L
Sbjct: 271 GKPGNSSSWVRSEIGRKKGLKISYFERLCECRPYRTPNPKFFADL 312

[Close]
BLAST of CmoCh15G008190 vs. NCBI nr
Match: gi|1009138625|ref|XP_015886686.1| (PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba])

HSP 1 Score: 251.5 bits (641), Expect = 3.5e-63
Identity = 131/225 (58.22%), Postives = 166/225 (73.78%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTFELSRTGTIVKEAVIQIYSTSPNCRILIC 392
           V  IL++ GSPPYL++GP C+    +  + +  LS+TG +V EA++QIY +SP CRIL+ 
Sbjct: 395 VSQILSIKGSPPYLVSGPLCVPER-KVFSHSNNLSKTGLLVFEAIVQIYKSSPECRILLS 454

Query: 393 APKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPILDK 452
           AP NS CD LM SL KVIPESNMFR  AAFR +D+VP DILSSC Y E+  CF+ P L+K
Sbjct: 455 APSNSACDVLMRSLMKVIPESNMFRVNAAFRGKDEVPDDILSSCLYKEE--CFACPSLEK 514

Query: 453 LREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVIVT 512
           L ++K+IFST+MSS+RLH++G+AAGHF+HIFL+DAS AIEPE LV L  FA   T+V+VT
Sbjct: 515 LLKFKVIFSTFMSSYRLHSEGIAAGHFSHIFLVDASFAIEPEALVTLANFADKNTAVVVT 574

Query: 513 GQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGL 557
           G+ GN  + VRS IGR+ GLK SYFERL    PY   NP F + L
Sbjct: 575 GKPGNSSSWVRSEIGRKKGLKISYFERLCECRPYRTPNPKFFADL 616

[Close]
BLAST of CmoCh15G008190 vs. NCBI nr
Match: gi|1009146793|ref|XP_015891061.1| (PREDICTED: uncharacterized protein LOC107425569 [Ziziphus jujuba])

HSP 1 Score: 248.8 bits (634), Expect = 2.3e-62
Identity = 129/227 (56.83%), Postives = 167/227 (73.57%), Query Frame = 1 

Query: 333 VHHILNLHGSPPYLINGPPCIHVNDRARNRTF--ELSRTGTIVKEAVIQIYSTSPNCRIL 392
           V  IL++ GSPPYL+ GP C+     ++N ++  E S+TG +V+EAV+QIY +SP CRIL
Sbjct: 566 VSQILSIQGSPPYLVAGPLCV---PESKNYSYSEEPSKTGKVVREAVVQIYKSSPECRIL 625

Query: 393 ICAPKNSTCDELMISLKKVIPESNMFRAIAAFRERDDVPYDILSSCYYNEDEQCFSSPIL 452
           I AP NS CD LM SLKKVIPESNMFRA AAFRE+++VP DILSSC Y ++   F+ P L
Sbjct: 626 ISAPSNSACDVLMRSLKKVIPESNMFRANAAFREKEEVPDDILSSCLYKKER--FACPSL 685

Query: 453 DKLREYKIIFSTYMSSFRLHAKGLAAGHFNHIFLLDASAAIEPETLVPLTKFATNATSVI 512
           D L++Y++IFST+MSSFRLH +G+ AGHF+H+FL+DAS+AIEPE LV +  F    T+++
Sbjct: 686 DGLKKYRVIFSTFMSSFRLHNEGIHAGHFSHVFLVDASSAIEPEALVTVANFLDKNTTLV 745

Query: 513 VTGQTGNQPN-VRSTIGRRNGLKTSYFERLELSLPYIDLNPLFISGL 557
           VTG+ GN    +RS I R  GL+TSYFERL    PY  LNP F + L
Sbjct: 746 VTGRHGNSSRWIRSEIARERGLRTSYFERLCQCRPYRTLNPKFFTDL 787

The following BLAST results are available for this feature:
BLAST of CmoCh15G008190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDE3_ARATH3.6e-2831.05Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=1 SV=1[more]
MOV10_CHICK1.1e-1931.05Putative helicase MOV-10 OS=Gallus gallus GN=MOV10 PE=2 SV=1[more]
MOV10_BOVIN1.3e-1731.15Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1[more]
M10L1_HUMAN1.1e-1632.31RNA helicase Mov10l1 OS=Homo sapiens GN=MOV10L1 PE=2 SV=1[more]
MOV10_HUMAN1.9e-1630.74Putative helicase MOV-10 OS=Homo sapiens GN=MOV10 PE=1 SV=2[more]
BLAST of CmoCh15G008190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2NGP6_GOSRA3.5e-6253.62Uncharacterized protein OS=Gossypium raimondii GN=B456_002G015200 PE=4 SV=1[more]
A0A0B0N7Z6_GOSAR5.1e-6152.77Putative RNA helicase SDE3-like protein OS=Gossypium arboreum GN=F383_16055 PE=4... [more]
W9RLB4_9ROSA1.5e-6057.08Uncharacterized protein OS=Morus notabilis GN=L484_023123 PE=4 SV=1[more]
M5XLH8_PRUPE1.2e-5957.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002317mg PE=4 SV=1[more]
A0A068U9J3_COFCA1.1e-5852.99Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019651001 PE=4 SV=1[more]
BLAST of CmoCh15G008190 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05460.12.1e-2931.05 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of CmoCh15G008190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1009146795|ref|XP_015891062.1|9.2e-6458.67PREDICTED: probable RNA helicase SDE3 isoform X1 [Ziziphus jujuba][more]
gi|1009173119|ref|XP_015867642.1|2.0e-6358.67PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba][more]
gi|1009173117|ref|XP_015867641.1|2.7e-6358.67PREDICTED: probable RNA helicase SDE3, partial [Ziziphus jujuba][more]
gi|1009138625|ref|XP_015886686.1|3.5e-6358.22PREDICTED: probable RNA helicase SDE3 [Ziziphus jujuba][more]
gi|1009146793|ref|XP_015891061.1|2.3e-6256.83PREDICTED: uncharacterized protein LOC107425569 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G008190.1CmoCh15G008190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 235..329
score: 6.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 371..541
score: 1.
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 333..352
score: 2.3E-31coord: 369..539
score: 2.3
NoneNo IPR availablePANTHERPTHR10887:SF331HELICASE MOV10L1-RELATEDcoord: 333..352
score: 2.3E-31coord: 369..539
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G008190Wax gourdcmowgoB0367
CmoCh15G008190Cucurbita moschata (Rifu)cmocmoB262
CmoCh15G008190Cucumber (Gy14) v1cgycmoB0605
CmoCh15G008190Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G008190Cucurbita maxima (Rimu)cmacmoB693
CmoCh15G008190Wild cucumber (PI 183967)cmocpiB290
CmoCh15G008190Cucumber (Chinese Long) v2cmocuB285
CmoCh15G008190Melon (DHL92) v3.5.1cmomeB240
CmoCh15G008190Watermelon (Charleston Gray)cmowcgB248
CmoCh15G008190Watermelon (97103) v1cmowmB269
CmoCh15G008190Cucurbita pepo (Zucchini)cmocpeB280
CmoCh15G008190Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G008190Bottle gourd (USVL1VR-Ls)cmolsiB256
CmoCh15G008190Cucumber (Gy14) v2cgybcmoB577
CmoCh15G008190Melon (DHL92) v3.6.1cmomedB272
CmoCh15G008190Silver-seed gourdcarcmoB0647
CmoCh15G008190Silver-seed gourdcarcmoB1118
CmoCh15G008190Cucumber (Chinese Long) v3cmocucB0340
CmoCh15G008190Watermelon (97103) v2cmowmbB271