CmoCh15G007940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G007940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DNA binding protein, putative
Location	Cmo_Chr15 : 3903209 .. 3905836 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACAGAGCCTCAGGGGAGAGTGAAGAAAACATAAAACCTTTACTTATCTCCTCAACATTTTTTCAGTTAATTATCGCTTGCATCTGTTCTTGATCATACCCTTGAATTTGCAATTGGAATTTGGAATCGTGCTATATTATCATCCTGTTCACCATTTTTGGTTTGGGTAATTCTGGGAATTTTAACATGGTAAGATTCCAGCTCTAGTTCAAGTAGTTTATTTTCAATATTTTGAACAGAATTTCATGTTAAGAGTGAATTTCTTGATGTCTCTTGAGGCATGATTTTTTTTTTCTCTTCTTTTATTGTATTAACTTGCCCTCTGATTCTTCATCACTGTAGAACACTGGTGGTGGTCTCTGTTCTAACAACATGAATTCAGCTGTTTATGAATCAACTGTGACTCCTGATCAACACTCTTCAGCAAATGTCCAATTAAAGGAATTTGCACCCAAGGTTTTGCCCAATTCTCTGTTTCAGAATTCTGATATGCTTCATTTCAAGAATTTCTAAATAACTTTACCCTATGTTTCTCATTGGTTAGGCAAGGAAACCTTACACGATCACAAAACAAAGAGAAAGATGGAAAGACGAAGAACATGATAAGTTCATAGAAGCTCTGAAGCTTTATGGCCGTGATTGGCGACAAATAGAAGGTATGGTTGAACAAAAAGAGCACGATGGCATATCCAATTATACTAAGTTTTTCTTTTTCGTTCTCCCTTTAATTGATTTTTCCTAACAGAGCATGTGGGTACCAAGACTGCAGTTCAGATTCGTAGCCATGCTCAGAAGTTCTTCTCCAAGGTATATAAACATTCCCATTTATGAATGTAAATAATTGTTGAAGGATTAATACTTGTTCTTCATGTTCATGATCTTCCACCTTTTCATTTGTTTTCCTTTTGCCTTAGGTCACGCGTAATTCAAATGGATGTAGCACAAACTTAGTAGGATGCATTGAGATTCCTCCGCCACGTCCGAAACGAAAGCCAGCGCATCCATATCCCCGTAAAGAAGTAGCTCATTCTCATAAGCTATCCTCCATTTCAGAACAGACAAGTTCTTTATCTCCACAGCTTTCAGAAAAAGAATGCCAGTCTCCAACATCAACAGTCGTAGCAGCAACGAGTGGTTCAGATACGCTAATGTTCGCCAATTCAAGGATTCATCATGATAGTGCATCTCCAGATTCATCTGTTCCATCTTCATTGGACAATGAGTCTCCAACAGCAGCAGCCCCAGTACCAGAAAATTCAACTCTCCATGAGAAAACTTCAAAGGTGCAGCTTCTTTTTGTCTCCCTTTTGATTGTCATTTTATTCGTGAGAGAACAAAACCCCCTTTAGAAACTTTTCCCTAGCAAACGCGTTTTAAAAACCTTGAATGGAAGCTCAAAAAAGGGAAAGTCCAAAAAGTACAATATTTGCTAGCAGGGGGCATGGACTGTTACAGATGATATCAGAGCCAAACACCGGGTGATGTGCTAATGAGGAAGCTGAGCCCCGAAGAGGGGTGGATTGTGAGAGAACGAAACACCCCTTTATGAGGTTATGGAAACCTCTCCCTACCTGCATTTTAAAAATCTTGAGGGGAAGCCCGAAAGGAAAAACCTAAATAGGACAATATTTGCTAGCGGTGTGTTTGGACAGTTACATTATAATTTCAGTAATCTTTCTTGAATTAAATACCTCTTGTTGCAACTAAAAGCTCTTTTATTTTGGATGGCAGAACCTGGAGTTATTTACAAAGGATGATATGCACGAAAAAGATGACTCTACAAAAGAACCATCACTCCAAAGTCTTAAGCTCTTTGGAAGAACTGTATTAATATCAGATCCCCACAAGCAAACTCCAACCATAGAGACCTGTTCATCCAAGGCCGACTCTAAACCAGGGGAAAACCAAAAACAAATATCACCAAGGAAATCTCCTACAGGAAATCCAGAGAGCACTTGGAATCATGGAGCTTTCTACTTCATACAACTCAATAACGTCGACTCGAATCAAGGCTCAGGTTCTACAGTCCCAGTATCATGGTGGAGTTCTTATGGCAGTTATCCACTATCTTTTGTACACTGTTTTAATCAAGCACATTCGAATCCAAGTCGAGAAGTCGATGATAGGGAAGCCCACAAGGATCAATCATGGTGCGGGTCGAACACGGGATCATTAAACAGTGGGGAAAATGATATCCAAAGCAGCAGCAGCAGAGTATTTCAAAATAGAGATGAGATGATTGGAAAAGCATTGTCTTGTGAATTAATAAGTAGCCATGAAAAGAACACCAAAGGGTTTGTGCCATACAAAAGATGCATGACAGAGAGAGCTACACAGTCCCATACAGTCACAGATACAGAGAGGGAGGAGAAGAGGATTAGGCTTTGCTTGTAGATTCAAACTAAATTTTGTACAGCCATTGAGGAGAAGCAGAAGAGGCTTGGTGATATAATCCCAACTTACCTGGCCTTGGCATGTTAAAATTTTGTTTAATTTTTTTTTTAACAATGCCCTTTTTTATAATTTTTTTTCCTTTGTTCATATTATACATAATTATATTCCTTCTTGTTTTATCGAAATAATTTTGTCAATTTTTGTAATTTTTGTAACCGTAAATTCTCGGGAA

mRNA sequence

TATACAGAGCCTCAGGGGAGAGTGAAGAAAACATAAAACCTTTACTTATCTCCTCAACATTTTTTCAGTTAATTATCGCTTGCATCTGTTCTTGATCATACCCTTGAATTTGCAATTGGAATTTGGAATCGTGCTATATTATCATCCTGTTCACCATTTTTGGTTTGGGTAATTCTGGGAATTTTAACATGAACACTGGTGGTGGTCTCTGTTCTAACAACATGAATTCAGCTGTTTATGAATCAACTGTGACTCCTGATCAACACTCTTCAGCAAATGTCCAATTAAAGGAATTTGCACCCAAGGCAAGGAAACCTTACACGATCACAAAACAAAGAGAAAGATGGAAAGACGAAGAACATGATAAGTTCATAGAAGCTCTGAAGCTTTATGGCCGTGATTGGCGACAAATAGAAGAGCATGTGGGTACCAAGACTGCAGTTCAGATTCGTAGCCATGCTCAGAAGTTCTTCTCCAAGGTCACGCGTAATTCAAATGGATGTAGCACAAACTTAGTAGGATGCATTGAGATTCCTCCGCCACGTCCGAAACGAAAGCCAGCGCATCCATATCCCCGTAAAGAAGTAGCTCATTCTCATAAGCTATCCTCCATTTCAGAACAGACAAGTTCTTTATCTCCACAGCTTTCAGAAAAAGAATGCCAGTCTCCAACATCAACAGTCGTAGCAGCAACGAGTGGTTCAGATACGCTAATGTTCGCCAATTCAAGGATTCATCATGATAGTGCATCTCCAGATTCATCTGTTCCATCTTCATTGGACAATGAGTCTCCAACAGCAGCAGCCCCAAACCTGGAGTTATTTACAAAGGATGATATGCACGAAAAAGATGACTCTACAAAAGAACCATCACTCCAAAGTCTTAAGCTCTTTGGAAGAACTGTATTAATATCAGATCCCCACAAGCAAACTCCAACCATAGAGACCTGTTCATCCAAGGCCGACTCTAAACCAGGGGAAAACCAAAAACAAATATCACCAAGGAAATCTCCTACAGGAAATCCAGAGAGCACTTGGAATCATGGAGCTTTCTACTTCATACAACTCAATAACGTCGACTCGAATCAAGGCTCAGGTTCTACAGTCCCAGTATCATGGTGGAGTTCTTATGGCAGTTATCCACTATCTTTTGTACACTGTTTTAATCAAGCACATTCGAATCCAAGTCGAGAAGTCGATGATAGGGAAGCCCACAAGGATCAATCATGGTGCGGGTCGAACACGGGATCATTAAACAGTGGGGAAAATGATATCCAAAGCAGCAGCAGCAGAGTATTTCAAAATAGAGATGAGATGATTGGAAAAGCATTGTCTTGTGAATTAATAAGTAGCCATGAAAAGAACACCAAAGGGTTTGTGCCATACAAAAGATGCATGACAGAGAGAGCTACACAGTCCCATACAGTCACAGATACAGAGAGGGAGGAGAAGAGGATTAGGCTTTGCTTGTAGATTCAAACTAAATTTTGTACAGCCATTGAGGAGAAGCAGAAGAGGCTTGGTGATATAATCCCAACTTACCTGGCCTTGGCATGTTAAAATTTTGTTTAATTTTTTTTTTAACAATGCCCTTTTTTATAATTTTTTTTCCTTTGTTCATATTATACATAATTATATTCCTTCTTGTTTTATCGAAATAATTTTGTCAATTTTTGTAATTTTTGTAACCGTAAATTCTCGGGAA

Coding sequence (CDS)

ATGAACACTGGTGGTGGTCTCTGTTCTAACAACATGAATTCAGCTGTTTATGAATCAACTGTGACTCCTGATCAACACTCTTCAGCAAATGTCCAATTAAAGGAATTTGCACCCAAGGCAAGGAAACCTTACACGATCACAAAACAAAGAGAAAGATGGAAAGACGAAGAACATGATAAGTTCATAGAAGCTCTGAAGCTTTATGGCCGTGATTGGCGACAAATAGAAGAGCATGTGGGTACCAAGACTGCAGTTCAGATTCGTAGCCATGCTCAGAAGTTCTTCTCCAAGGTCACGCGTAATTCAAATGGATGTAGCACAAACTTAGTAGGATGCATTGAGATTCCTCCGCCACGTCCGAAACGAAAGCCAGCGCATCCATATCCCCGTAAAGAAGTAGCTCATTCTCATAAGCTATCCTCCATTTCAGAACAGACAAGTTCTTTATCTCCACAGCTTTCAGAAAAAGAATGCCAGTCTCCAACATCAACAGTCGTAGCAGCAACGAGTGGTTCAGATACGCTAATGTTCGCCAATTCAAGGATTCATCATGATAGTGCATCTCCAGATTCATCTGTTCCATCTTCATTGGACAATGAGTCTCCAACAGCAGCAGCCCCAAACCTGGAGTTATTTACAAAGGATGATATGCACGAAAAAGATGACTCTACAAAAGAACCATCACTCCAAAGTCTTAAGCTCTTTGGAAGAACTGTATTAATATCAGATCCCCACAAGCAAACTCCAACCATAGAGACCTGTTCATCCAAGGCCGACTCTAAACCAGGGGAAAACCAAAAACAAATATCACCAAGGAAATCTCCTACAGGAAATCCAGAGAGCACTTGGAATCATGGAGCTTTCTACTTCATACAACTCAATAACGTCGACTCGAATCAAGGCTCAGGTTCTACAGTCCCAGTATCATGGTGGAGTTCTTATGGCAGTTATCCACTATCTTTTGTACACTGTTTTAATCAAGCACATTCGAATCCAAGTCGAGAAGTCGATGATAGGGAAGCCCACAAGGATCAATCATGGTGCGGGTCGAACACGGGATCATTAAACAGTGGGGAAAATGATATCCAAAGCAGCAGCAGCAGAGTATTTCAAAATAGAGATGAGATGATTGGAAAAGCATTGTCTTGTGAATTAATAAGTAGCCATGAAAAGAACACCAAAGGGTTTGTGCCATACAAAAGATGCATGACAGAGAGAGCTACACAGTCCCATACAGTCACAGATACAGAGAGGGAGGAGAAGAGGATTAGGCTTTGCTTGTAG

Homology

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BLAST of CmoCh15G007940 vs. Swiss-Prot
Match: RVE1_ARATH (Protein REVEILLE 1 OS=Arabidopsis thaliana GN=RVE1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.3e-50
Identity = 127/237 (53.59%), Postives = 159/237 (67.09%), Query Frame = 1


Query: 35  EFAPKARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKF 94
           ++APK RKPYTITK+RERW DEEH KF+EALKLYGR WR+IEEHVG+KTAVQIRSHAQKF
Sbjct: 40  DYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQKF 99

Query: 95  FSKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTS-SLSPQL 154
           FSKV R + G   + V  I IPPPRPKRKPAHPYPR       K  + ++QTS S+SP  
Sbjct: 100 FSKVAREATGGDGSSVEPIVIPPPRPKRKPAHPYPR-------KFGNEADQTSRSVSP-- 159

Query: 155 SEKECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSV--PSSLDNESPTAAAP---- 214
           SE++ QSPTS  V +T GS+ L   +S   + S SP SS   P++L   + TA AP    
Sbjct: 160 SERDTQSPTS--VLSTVGSEALCSLDSSSPNRSLSPVSSASPPAAL---TTTANAPEELE 219

Query: 215 --NLELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSKP 263
              LELF  + +  ++ S KEP+ QSLKLFG+TVL+SD    +    +   K+  +P
Sbjct: 220 TLKLELFPSERLLNRESSIKEPTKQSLKLFGKTVLVSDSGMSSSLTTSTYCKSPIQP 262

[Close]

BLAST of CmoCh15G007940 vs. Swiss-Prot
Match: RVE2_ARATH (Protein REVEILLE 2 OS=Arabidopsis thaliana GN=RVE2 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-37
Identity = 103/226 (45.58%), Postives = 133/226 (58.85%), Query Frame = 1


Query: 36  FAPKARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFF 95
           F  K RKPYTITKQRE+W + EH+KF+EALKLYGR WR+IEEHVGTKTAVQIRSHAQKFF
Sbjct: 22  FYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFF 81

Query: 96  SKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLSE 155
           +KV R+    S +    IEIPPPRPKRKP HPYPRK V    K    +E T   S  + +
Sbjct: 82  TKVARDFGVSSES----IEIPPPRPKRKPMHPYPRKLVIPDAKEMVYAELTG--SKLIQD 141

Query: 156 KECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVPSSLDNESPTAAAPNLELFTKD 215
           ++ +SPTS  V +  GSD L                    S+ + SP +++  L   T++
Sbjct: 142 EDNRSPTS--VLSAHGSDGL-------------------GSIGSNSPNSSSAELSSHTEE 201

Query: 216 DMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSK 262
            +     S +  + QSLKLFG+T ++ D +       +C    D K
Sbjct: 202 SL-----SLEAETKQSLKLFGKTFVVGDYNSSM----SCDDSEDGK 211

[Close]

BLAST of CmoCh15G007940 vs. Swiss-Prot
Match: RVE7_ARATH (Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-36
Identity = 95/207 (45.89%), Postives = 124/207 (59.90%), Query Frame = 1


Query: 39  KARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKV 98
           K RKPYT+TKQRE+W +EEHD+F+EA+KLYGR WRQI+EH+GTKTAVQIRSHAQKFFSK+
Sbjct: 65  KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 124

Query: 99  TRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLS--EK 158
            + ++  S   V  I IPPPRPKRKPAHPYPRK         S    T S  P LS  EK
Sbjct: 125 AQEADSRSEGSVKAIVIPPPRPKRKPAHPYPRK---------SPVPYTQSPPPNLSAMEK 184

Query: 159 ECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVPSSLDNESPTAAAPNLELFTKDD 218
             +SPTS  V ++ GS+  +        +  S  +S  S + +   T+        T   
Sbjct: 185 GTKSPTS--VLSSFGSEDQV--------NRCSSPNSCTSDIQSIGATSIDKKNNYTTSKQ 244

Query: 219 MHEKDDSTKEPSLQSLKLFGRTVLISD 244
             + D       + S+ LFG+ VL+++
Sbjct: 245 PFKDDSDIGSTPISSITLFGKIVLVAE 252

[Close]

BLAST of CmoCh15G007940 vs. Swiss-Prot
Match: RVE7L_ARATH (Protein REVEILLE 7-like OS=Arabidopsis thaliana GN=RVE7L PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.6e-35
Identity = 87/160 (54.37%), Postives = 105/160 (65.62%), Query Frame = 1


Query: 39  KARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKV 98
           K RKPYT+TKQRE+W +EEHD+F+EA+KLYGR WRQI+EH+GTKTAVQIRSHAQKFFSK+
Sbjct: 54  KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 113

Query: 99  TRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLS--EK 158
            + ++  S   V  I IPPPRPKRKPAHPYPRK         S    T S  P LS  EK
Sbjct: 114 AQEADSRSEGSVKAIVIPPPRPKRKPAHPYPRK---------SPVPYTQSPPPNLSAMEK 173

Query: 159 ECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVPSS 197
             +SPTS V+++    D   +  S+      S   S P S
Sbjct: 174 GTKSPTS-VLSSFGSEDQNNYTTSKQPFKDDSDIGSTPIS 203

[Close]

BLAST of CmoCh15G007940 vs. Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.7e-30
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 39  KARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKV 98
           K RKPYTITKQRERW +EEH++FIEAL+LYGR W++IEEHV TKTAVQIRSHAQKFFSKV
Sbjct: 13  KTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKV 72

Query: 99  TR--NSNGCSTNLVGCIEIPPPRPKRKPAHPYPRK 132
            +   + G +      I IPPPRPKRKP +PYPRK
Sbjct: 73  EKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRK 107

[Close]

BLAST of CmoCh15G007940 vs. TrEMBL
Match: A0A0A0KPX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G341040 PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 4.6e-184
Identity = 347/462 (75.11%), Postives = 377/462 (81.60%), Query Frame = 1


Query: 2   NTGGGLCSNNMNSAVYESTVTPDQHSSANVQLKEFAPKARKPYTITKQRERWKDEEHDKF 61
           NTGGGLCS+N++SAVYE TVTPDQ+SSANVQLKEF PK RKPYTITKQRERWK+EEH+KF
Sbjct: 10  NTGGGLCSDNISSAVYEPTVTPDQYSSANVQLKEFCPKVRKPYTITKQRERWKEEEHEKF 69

Query: 62  IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPPPRPK 121
           IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCST  +GCIEIPPPRPK
Sbjct: 70  IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTTSIGCIEIPPPRPK 129

Query: 122 RKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLSEKECQSPTSTVVAATSGSDTLMFANSR 181
           RKPAHPYPRKEV  SHK S ISEQT SLSPQLSEKECQSPTS VVA  SGSDTLMF +SR
Sbjct: 130 RKPAHPYPRKEVPQSHKASPISEQTRSLSPQLSEKECQSPTSIVVAG-SGSDTLMFTDSR 189

Query: 182 IHHDSASPDSSVP------SSLDNESPTAA------------APNLELFTKDDMHEKDDS 241
           IHHDS SPDSS+P      SSLDNESPTAA              NLELFTKD++ EKDDS
Sbjct: 190 IHHDSGSPDSSIPSTEPNSSSLDNESPTAALGIENSIPHEKIPTNLELFTKDNVIEKDDS 249

Query: 242 TKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSKPGENQKQISP-----RKSPTGN 301
           TKE S+QSLKLFGRTVLI+DPHK TP +E    +AD KPGENQKQ+SP       S TGN
Sbjct: 250 TKEVSIQSLKLFGRTVLITDPHKHTPILENSMPEADRKPGENQKQVSPWNSIVMDSSTGN 309

Query: 302 PESTWNHGAFYFIQLNNVDSNQGSGSTVPVSWWSSYGSYPLSFVHCFNQAHSNPSREVDD 361
            + TWNHGAFYFIQLNN DS QG  S VPVSWWSSYGSYP SFVHCF QA SNP+ +V+D
Sbjct: 310 TDCTWNHGAFYFIQLNNGDSKQGD-SAVPVSWWSSYGSYPFSFVHCFKQADSNPN-QVND 369

Query: 362 REAHKDQSWCGSNTGSLNSGENDIQSS-----SSRVFQN--------RDEMIGKALSCEL 421
           +E HKDQSWCGSNTGS+NSGEN  + S     S R+F N        ++E+IGKALSCEL
Sbjct: 370 KETHKDQSWCGSNTGSVNSGENGDKVSENDVESCRLFHNNRDGDSVSKEELIGKALSCEL 429

Query: 422 ISSHEKNTKGFVPYKRCMTERATQSHTVTDTEREEKRIRLCL 428
           ISSHEKNTKGFVPYKRCM ERAT+ HT+T+ EREEKRIRLCL
Sbjct: 430 ISSHEKNTKGFVPYKRCMAERATKPHTITEAEREEKRIRLCL 468

[Close]

BLAST of CmoCh15G007940 vs. TrEMBL
Match: A5C7G8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012100 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.1e-75
Identity = 206/491 (41.96%), Postives = 276/491 (56.21%), Query Frame = 1


Query: 5   GGLCSNNMNSAVYESTVTPDQHSSANVQLK-------EFAPKARKPYTITKQRERWKDEE 64
           GG  SN   SA    ++    HS    +LK       + APKARKPYTITKQRERW +EE
Sbjct: 56  GGSRSNTFLSAGNLISLDAGTHSLTAAELKXQFSCRDDLAPKARKPYTITKQRERWTEEE 115

Query: 65  HDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPP 124
           H KF+EALKLYGR WR+IEEHVGTKTAVQIRSHAQKFFSKV R ++G +TN    IEIPP
Sbjct: 116 HKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVVRETSGGNTNSAEPIEIPP 175

Query: 125 PRPKRKPAHPYPRKEVAHSHK-LSSISEQTSSLSPQL--SEKECQSPTSTVVAATSGSDT 184
           PRPKRKP HPYPRK V    K +S +     S+SP    SE+E QSPTS + A   GS+T
Sbjct: 176 PRPKRKPVHPYPRKLVHPLRKGISVLEPPVRSVSPNFSASEQENQSPTSVLSAV--GSET 235

Query: 185 LMFANSRIHHDSASPDSSV--------------PSSLDNESP------TAAAPN------ 244
           L    S   + S SP SS               P + +N SP      +++ P+      
Sbjct: 236 LGSTLSNTQNGSPSPVSSAAGVNPDRMFLPELNPPTEENASPSPVLTTSSSVPDEPLPMK 295

Query: 245 LELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHK-QTPTIETCSSKADSKPGENQK 304
            ELF + ++  K+ S +E S ++LKLFGRTVL++D H+  +PT         +  G + +
Sbjct: 296 FELFPQ-EIFAKECSVEEASTRTLKLFGRTVLVTDSHRPSSPTTSKSQPSDINNEGMHVE 355

Query: 305 QI----SPRKSPTGNPESTWNH------GAFYFIQLNNVDSN-QGSGSTVPVSWWSSYGS 364
            +    +P +S   N   +W+H      GAFY++     DSN   +G+T P+ WW+ YG 
Sbjct: 356 TLPWNSTPTESSPENSSFSWSHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWTFYGG 415

Query: 365 YPLSFVHCFNQ----AHSNPS-REVDDREAHKDQSWCGSNTGSLNSGEN-----DIQSSS 424
            P+ F+   +Q    AH +    E  D+E  K+ SW GSNTGS+N G N     D+++ S
Sbjct: 416 IPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSVNEGGNCDTNWDVETQS 475

Query: 425 SRVF-QNRDEMIGKALSCELI---------SSHEKNTKGFVPYKRCMTERATQSHTVTDT 428
            + +    ++    A   +L          ++ +K  KGF+PYKRC+ ER TQS  +   
Sbjct: 476 HQPYLDTMEKESDSAFELKLSERSAFSRGRTNTDKCVKGFMPYKRCLAERDTQSSIIIGN 535

[Close]

BLAST of CmoCh15G007940 vs. TrEMBL
Match: D7TA25_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0079g00410 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.3e-74
Identity = 203/477 (42.56%), Postives = 271/477 (56.81%), Query Frame = 1


Query: 5   GGLCSNNMNSAVYESTVTPDQHSSANVQLKE-------FAPKARKPYTITKQRERWKDEE 64
           GG  SN   SA    ++    HS    +LKE        APKARKPYTITKQRERW +EE
Sbjct: 8   GGSRSNTFLSAGNLISLDAGTHSLTAAELKEQFSCRDDLAPKARKPYTITKQRERWTEEE 67

Query: 65  HDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPP 124
           H KF+EALKLYGR WR+IEEHVGTKTAVQIRSHAQKFFSKV R ++G +TN    IEIPP
Sbjct: 68  HKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVVRETSGGNTNSAEPIEIPP 127

Query: 125 PRPKRKPAHPYPRKEVAHSHK-LSSISEQTSSLSPQL--SEKECQSPTSTVVAATSGSDT 184
           PRPKRKP HPYPRK V    K +S +     S+SP    SE+E QSPTS + A   GS+T
Sbjct: 128 PRPKRKPVHPYPRKLVHPLRKGISVLEPPVRSVSPNFSASEQENQSPTSVLSAV--GSET 187

Query: 185 LMFANSRIHHDSASPDSSV--------------PSSLDNESP------TAAAPN------ 244
           L    S   + S SP SS               P + +N SP      +++ P+      
Sbjct: 188 LGSTLSNTQNGSPSPVSSAAGVNPDRMFLPELNPPTEENASPSPVLTTSSSVPDEPLPMK 247

Query: 245 LELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHK-QTPTIETCSSKADSKPGENQK 304
            ELF + ++  K+ S +E S ++LKLFGRTVL++D H+  +PT         +  G + +
Sbjct: 248 FELFPQ-EIFAKECSVEEASTRTLKLFGRTVLVTDSHRPSSPTTSKSQPSDINNEGMHVE 307

Query: 305 QI----SPRKSPTGNPESTWNH------GAFYFIQLNNVDSN-QGSGSTVPVSWWSSYGS 364
            +    +P +S   N   +W+H      GAFY++     DSN   +G+T P+ WW+ YG 
Sbjct: 308 TLPWNSTPTESSPENSSFSWSHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWTFYGG 367

Query: 365 YPLSFVHCFNQ----AHSNPS-REVDDREAHKDQSWCGSNTGSLNSGEND-IQSSSSRVF 424
            P+ F+   +Q    AH +    E  D+E  K+ SW GSNTGS +    D ++  S   F
Sbjct: 368 IPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSSHQPYLDTMEKESDSAF 427

Query: 425 QNRDEMIGKALSCELISSHEKNTKGFVPYKRCMTERATQSHTVTDTEREEKRIRLCL 428
           + +  +  ++      ++ +K  KGF+PYKRC+ ER TQS  +   EREE+RIRLCL
Sbjct: 428 ELK--LSERSAFSRGRTNTDKCVKGFMPYKRCLAERDTQSSIIIGNEREEQRIRLCL 479

[Close]

BLAST of CmoCh15G007940 vs. TrEMBL
Match: A0A067KI22_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10504 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.3e-73
Identity = 204/487 (41.89%), Postives = 272/487 (55.85%), Query Frame = 1


Query: 5   GGLCSNNMNSAVYESTVTPDQHSSANVQLKE-------FAPKARKPYTITKQRERWKDEE 64
           GG  SN +  A    ++    H+    Q+KE       + PK RKPYTITKQRERW ++E
Sbjct: 18  GGTRSNTVLPAGNGISLNAGLHNLTGAQIKEQFTCGNEYCPKVRKPYTITKQRERWTEDE 77

Query: 65  HDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPP 124
           H KF+EALKLYGR WR+IEEHVGTKTAVQIRSHAQKFFSKV R ++G +T  V  IEIPP
Sbjct: 78  HKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVVREASGSNTASVEPIEIPP 137

Query: 125 PRPKRKPAHPYPRKEVAHSHKLSSISEQT-SSLSPQ--LSEKECQSPTSTVVAATSGSDT 184
           PRPKRKP HPYPRK +   +K +S+ EQ   SLSP   +SE+E QSPTS  V +  GSD 
Sbjct: 138 PRPKRKPVHPYPRKMMHPVNKETSVPEQPLRSLSPNFSISEQENQSPTS--VLSVVGSDA 197

Query: 185 LMFANSRIHHDSASPDSSVPSSLDNE--------------SPTAAAPN------------ 244
           L   +S I + S SP S    S  N+              SP+ A P             
Sbjct: 198 LGSNDSNIPNRSVSPVSFASGSHANDFSTCEPNLTPEDDGSPSPAPPTAVALDDQSPKVQ 257

Query: 245 -LELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSKPGENQ- 304
            L LF K+D+  ++    E S +SLKLFGRTVL++  H  TP+  T  +    +  EN+ 
Sbjct: 258 KLNLFPKEDVFPEERLVAETSTRSLKLFGRTVLVTGCH--TPSSPTTGNSKLLQSDENEV 317

Query: 305 KQISP-------RKSPTGNPESTWNH------GAFYFIQLNNVDSNQ-GSGSTVPVSWWS 364
           K + P        +  +GN + TWNH      GA Y++ L   + N   +GST+P  WW+
Sbjct: 318 KPVQPLSWNFMATELQSGNRDCTWNHLPHGPPGALYYLPLQKENPNSVEAGSTLP--WWA 377

Query: 365 SYGSYPLSFVHCFNQAHS-----NPSREVDDREAHKDQSWCGSNTGSLNSGEN-----DI 424
             G  P   V    Q  +     +   E+ D+E  K+ SW GSN+GS+N GEN     D 
Sbjct: 378 FCGGMPFPIVPFHKQEPAKIHLESNGEEIQDKEIQKEGSWTGSNSGSVNDGENVDKNPDW 437

Query: 425 QSSSSRVFQNRDE--MIGKALSCELISSHEKNTKGFVPYKRCMTERATQSHTVTDTEREE 428
           ++ S ++ +   E   + +    E + S  ++ +GFVPYK+ + ER +QS T+T  EREE
Sbjct: 438 ETQSRQLPREEKEPYPVLELKPSEKLVSSSRSMRGFVPYKKRIAERDSQSSTITGEEREE 497

[Close]

BLAST of CmoCh15G007940 vs. TrEMBL
Match: B9SKS0_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1604380 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.6e-72
Identity = 204/470 (43.40%), Postives = 265/470 (56.38%), Query Frame = 1


Query: 26  HSSANVQLKE-------FAPKARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEH 85
           H+    QLKE       ++PKARKPYTITKQRERW +EEH KF+EALKLYGR WR+IEEH
Sbjct: 8   HNVTGPQLKEQFSCGSDYSPKARKPYTITKQRERWTEEEHKKFLEALKLYGRAWRRIEEH 67

Query: 86  VGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHK 145
           VGTKTAVQIRSHAQKFFSKV R  +G ST+ V  IEIPPPRPKRKP HPYPRK     +K
Sbjct: 68  VGTKTAVQIRSHAQKFFSKVVREGSGSSTSAVEPIEIPPPRPKRKPMHPYPRKMAHPLNK 127

Query: 146 LSSISEQ---TSSLSPQLSEKECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSV-- 205
             SI+EQ   +SS +  +SE+E QSPTS + A   GSD L   +S   + S+SP S    
Sbjct: 128 ELSITEQPLRSSSPNFSISEQENQSPTSVLSAV--GSDVLGSTDSNPPNCSSSPMSCAGG 187

Query: 206 ----------PSSL--DNESPTAA-------------APNLELFTKDDMHEKDDSTKEPS 265
                     P+S   +NESP+ A                LELF +++   ++   +E S
Sbjct: 188 SHLDDFQICEPNSAPENNESPSPAPATAEAHDEQSLKVQKLELFPEENAFAEEGVGEETS 247

Query: 266 LQSLKLFGRTVLI------SDPHKQTPTIETCSSKADS----KPGENQKQISPRKSPTGN 325
            +SLKLFG+TVL+      S P   +PT++T   K       KP   + Q+       GN
Sbjct: 248 TRSLKLFGKTVLVNECNRPSSPANGSPTLDTNDEKPVQPLPWKPMAIELQL-------GN 307

Query: 326 PESTWNH------GAFYFIQLNNVDSNQGS-GSTVPVSWWSSYGSYPLSFVHCFNQ---- 385
            E  W++      G+  ++QL   +SN G  GS  P  WW+ YG  P  F+ C  Q    
Sbjct: 308 GECNWSNLPQGPPGSLCYLQLQKENSNSGEVGSATPFPWWAFYGGMPYPFIPCHKQEPAT 367

Query: 386 -AHSNPSRE-VDDREAHKDQSWCGSNTGSLNSGENDIQS----SSSRVFQNRDEMIGKAL 428
             H + S E +  +E  K+ SW GSN+GS+N GEN  ++    + SR F    + +   L
Sbjct: 368 EEHLDSSGEDIQYKEIQKEGSWTGSNSGSVNEGENADKNMDGETESRHFSCEVKELYPVL 427

[Close]

BLAST of CmoCh15G007940 vs. TAIR10
Match: AT5G17300.1 (AT5G17300.1 Homeodomain-like superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51
Identity = 127/237 (53.59%), Postives = 159/237 (67.09%), Query Frame = 1


Query: 35  EFAPKARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKF 94
           ++APK RKPYTITK+RERW DEEH KF+EALKLYGR WR+IEEHVG+KTAVQIRSHAQKF
Sbjct: 40  DYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQKF 99

Query: 95  FSKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTS-SLSPQL 154
           FSKV R + G   + V  I IPPPRPKRKPAHPYPR       K  + ++QTS S+SP  
Sbjct: 100 FSKVAREATGGDGSSVEPIVIPPPRPKRKPAHPYPR-------KFGNEADQTSRSVSP-- 159

Query: 155 SEKECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSV--PSSLDNESPTAAAP---- 214
           SE++ QSPTS  V +T GS+ L   +S   + S SP SS   P++L   + TA AP    
Sbjct: 160 SERDTQSPTS--VLSTVGSEALCSLDSSSPNRSLSPVSSASPPAAL---TTTANAPEELE 219

Query: 215 --NLELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSKP 263
              LELF  + +  ++ S KEP+ QSLKLFG+TVL+SD    +    +   K+  +P
Sbjct: 220 TLKLELFPSERLLNRESSIKEPTKQSLKLFGKTVLVSDSGMSSSLTTSTYCKSPIQP 262

[Close]

BLAST of CmoCh15G007940 vs. TAIR10
Match: AT5G37260.1 (AT5G37260.1 Homeodomain-like superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 8.1e-39
Identity = 103/226 (45.58%), Postives = 133/226 (58.85%), Query Frame = 1


Query: 36  FAPKARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFF 95
           F  K RKPYTITKQRE+W + EH+KF+EALKLYGR WR+IEEHVGTKTAVQIRSHAQKFF
Sbjct: 22  FYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFF 81

Query: 96  SKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLSE 155
           +KV R+    S +    IEIPPPRPKRKP HPYPRK V    K    +E T   S  + +
Sbjct: 82  TKVARDFGVSSES----IEIPPPRPKRKPMHPYPRKLVIPDAKEMVYAELTG--SKLIQD 141

Query: 156 KECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVPSSLDNESPTAAAPNLELFTKD 215
           ++ +SPTS  V +  GSD L                    S+ + SP +++  L   T++
Sbjct: 142 EDNRSPTS--VLSAHGSDGL-------------------GSIGSNSPNSSSAELSSHTEE 201

Query: 216 DMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSK 262
            +     S +  + QSLKLFG+T ++ D +       +C    D K
Sbjct: 202 SL-----SLEAETKQSLKLFGKTFVVGDYNSSM----SCDDSEDGK 211

[Close]

BLAST of CmoCh15G007940 vs. TAIR10
Match: AT1G18330.2 (AT1G18330.2 Homeodomain-like superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 8.9e-38
Identity = 95/207 (45.89%), Postives = 124/207 (59.90%), Query Frame = 1


Query: 39  KARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKV 98
           K RKPYT+TKQRE+W +EEHD+F+EA+KLYGR WRQI+EH+GTKTAVQIRSHAQKFFSK+
Sbjct: 65  KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 124

Query: 99  TRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLS--EK 158
            + ++  S   V  I IPPPRPKRKPAHPYPRK         S    T S  P LS  EK
Sbjct: 125 AQEADSRSEGSVKAIVIPPPRPKRKPAHPYPRK---------SPVPYTQSPPPNLSAMEK 184

Query: 159 ECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVPSSLDNESPTAAAPNLELFTKDD 218
             +SPTS  V ++ GS+  +        +  S  +S  S + +   T+        T   
Sbjct: 185 GTKSPTS--VLSSFGSEDQV--------NRCSSPNSCTSDIQSIGATSIDKKNNYTTSKQ 244

Query: 219 MHEKDDSTKEPSLQSLKLFGRTVLISD 244
             + D       + S+ LFG+ VL+++
Sbjct: 245 PFKDDSDIGSTPISSITLFGKIVLVAE 252

[Close]

BLAST of CmoCh15G007940 vs. TAIR10
Match: AT3G10113.1 (AT3G10113.1 Homeodomain-like superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-36
Identity = 87/160 (54.37%), Postives = 105/160 (65.62%), Query Frame = 1


Query: 39  KARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKV 98
           K RKPYT+TKQRE+W +EEHD+F+EA+KLYGR WRQI+EH+GTKTAVQIRSHAQKFFSK+
Sbjct: 54  KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 113

Query: 99  TRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLS--EK 158
            + ++  S   V  I IPPPRPKRKPAHPYPRK         S    T S  P LS  EK
Sbjct: 114 AQEADSRSEGSVKAIVIPPPRPKRKPAHPYPRK---------SPVPYTQSPPPNLSAMEK 173

Query: 159 ECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVPSS 197
             +SPTS V+++    D   +  S+      S   S P S
Sbjct: 174 GTKSPTS-VLSSFGSEDQNNYTTSKQPFKDDSDIGSTPIS 203

[Close]

BLAST of CmoCh15G007940 vs. TAIR10
Match: AT2G46830.1 (AT2G46830.1 circadian clock associated 1)

HSP 1 Score: 135.2 bits (339), Expect = 9.5e-32
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 39  KARKPYTITKQRERWKDEEHDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKV 98
           K RKPYTITKQRERW +EEH++FIEAL+LYGR W++IEEHV TKTAVQIRSHAQKFFSKV
Sbjct: 13  KTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKV 72

Query: 99  TR--NSNGCSTNLVGCIEIPPPRPKRKPAHPYPRK 132
            +   + G +      I IPPPRPKRKP +PYPRK
Sbjct: 73  EKEAEAKGVAMGQALDIAIPPPRPKRKPNNPYPRK 107

[Close]

BLAST of CmoCh15G007940 vs. NCBI nr
Match: gi|778702140|ref|XP_011655141.1| (PREDICTED: protein REVEILLE 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 652.1 bits (1681), Expect = 6.6e-184
Identity = 347/462 (75.11%), Postives = 377/462 (81.60%), Query Frame = 1


Query: 2   NTGGGLCSNNMNSAVYESTVTPDQHSSANVQLKEFAPKARKPYTITKQRERWKDEEHDKF 61
           NTGGGLCS+N++SAVYE TVTPDQ+SSANVQLKEF PK RKPYTITKQRERWK+EEH+KF
Sbjct: 10  NTGGGLCSDNISSAVYEPTVTPDQYSSANVQLKEFCPKVRKPYTITKQRERWKEEEHEKF 69

Query: 62  IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPPPRPK 121
           IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCST  +GCIEIPPPRPK
Sbjct: 70  IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTTSIGCIEIPPPRPK 129

Query: 122 RKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLSEKECQSPTSTVVAATSGSDTLMFANSR 181
           RKPAHPYPRKEV  SHK S ISEQT SLSPQLSEKECQSPTS VVA  SGSDTLMF +SR
Sbjct: 130 RKPAHPYPRKEVPQSHKASPISEQTRSLSPQLSEKECQSPTSIVVAG-SGSDTLMFTDSR 189

Query: 182 IHHDSASPDSSVP------SSLDNESPTAA------------APNLELFTKDDMHEKDDS 241
           IHHDS SPDSS+P      SSLDNESPTAA              NLELFTKD++ EKDDS
Sbjct: 190 IHHDSGSPDSSIPSTEPNSSSLDNESPTAALGIENSIPHEKIPTNLELFTKDNVIEKDDS 249

Query: 242 TKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSKPGENQKQISP-----RKSPTGN 301
           TKE S+QSLKLFGRTVLI+DPHK TP +E    +AD KPGENQKQ+SP       S TGN
Sbjct: 250 TKEVSIQSLKLFGRTVLITDPHKHTPILENSMPEADRKPGENQKQVSPWNSIVMDSSTGN 309

Query: 302 PESTWNHGAFYFIQLNNVDSNQGSGSTVPVSWWSSYGSYPLSFVHCFNQAHSNPSREVDD 361
            + TWNHGAFYFIQLNN DS QG  S VPVSWWSSYGSYP SFVHCF QA SNP+ +V+D
Sbjct: 310 TDCTWNHGAFYFIQLNNGDSKQGD-SAVPVSWWSSYGSYPFSFVHCFKQADSNPN-QVND 369

Query: 362 REAHKDQSWCGSNTGSLNSGENDIQSS-----SSRVFQN--------RDEMIGKALSCEL 421
           +E HKDQSWCGSNTGS+NSGEN  + S     S R+F N        ++E+IGKALSCEL
Sbjct: 370 KETHKDQSWCGSNTGSVNSGENGDKVSENDVESCRLFHNNRDGDSVSKEELIGKALSCEL 429

Query: 422 ISSHEKNTKGFVPYKRCMTERATQSHTVTDTEREEKRIRLCL 428
           ISSHEKNTKGFVPYKRCM ERAT+ HT+T+ EREEKRIRLCL
Sbjct: 430 ISSHEKNTKGFVPYKRCMAERATKPHTITEAEREEKRIRLCL 468

[Close]

BLAST of CmoCh15G007940 vs. NCBI nr
Match: gi|659126394|ref|XP_008463161.1| (PREDICTED: protein REVEILLE 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 639.4 bits (1648), Expect = 4.4e-180
Identity = 341/462 (73.81%), Postives = 373/462 (80.74%), Query Frame = 1


Query: 2   NTGGGLCSNNMNSAVYESTVTPDQHSSANVQLKEFAPKARKPYTITKQRERWKDEEHDKF 61
           NTGGGLCS++++SA YE TV+PDQHSS NVQLKEF PK RKPYTITKQRERWK+EEH+KF
Sbjct: 10  NTGGGLCSDSISSAGYEPTVSPDQHSSPNVQLKEFCPKVRKPYTITKQRERWKEEEHEKF 69

Query: 62  IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPPPRPK 121
           IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCST  VGCIEIPPPRPK
Sbjct: 70  IEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTTSVGCIEIPPPRPK 129

Query: 122 RKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLSEKECQSPTSTVVAATSGSDTLMFANSR 181
           RKPAHPYPRKEV  S K S ISEQT SLSPQLSEKEC SPTS VVA  +GSDTLMF +SR
Sbjct: 130 RKPAHPYPRKEVPQSRKASPISEQTRSLSPQLSEKECPSPTSIVVAG-NGSDTLMFTDSR 189

Query: 182 IHHDSASPDSSVP------SSLDNESPTAA------------APNLELFTKDDMHEKDDS 241
           IHHDS SPDSS+P      SSLDNES TAA              NLELFTKDD+ EKDDS
Sbjct: 190 IHHDSGSPDSSIPSTEPNSSSLDNESLTAALGTENSIPHDNIPTNLELFTKDDVIEKDDS 249

Query: 242 TKEPSLQSLKLFGRTVLISDPHKQTPTIETCSSKADSKPGENQKQISP-----RKSPTGN 301
           TKE S+QSLKLFGRTVLI+DPHKQ+P +E    +AD KPG+NQKQ+SP       S TGN
Sbjct: 250 TKEVSIQSLKLFGRTVLITDPHKQSPILENSMPEADRKPGDNQKQVSPWNSIVMDSSTGN 309

Query: 302 PESTWNHGAFYFIQLNNVDSNQGSGSTVPVSWWSSYGSYPLSFVHCFNQAHSNPSREVDD 361
            + TWNHGAFYFIQLNN DS QG GS VPVSWWSSYGSYP SFVHCF QA SN + +VDD
Sbjct: 310 TDCTWNHGAFYFIQLNNGDSKQGPGSAVPVSWWSSYGSYPFSFVHCFKQADSN-ANQVDD 369

Query: 362 REAHKDQSWCGSNTGSLNSGENDIQSS-----SSRVFQN--------RDEMIGKALSCEL 421
           +E HKDQSWCGSNTGS+NSGEN  ++S     S R+F N        ++E+IGKALS EL
Sbjct: 370 KETHKDQSWCGSNTGSVNSGENGDKASENDIQSCRLFHNNRDGDSVSKEELIGKALSFEL 429

Query: 422 ISSHEKNTKGFVPYKRCMTERATQSHTVTDTEREEKRIRLCL 428
           ISSHEKNTKGFVPYKRCM E AT+SHT+T+ EREEKRIRLCL
Sbjct: 430 ISSHEKNTKGFVPYKRCMAEGATKSHTITEAEREEKRIRLCL 469

[Close]

BLAST of CmoCh15G007940 vs. NCBI nr
Match: gi|778702143|ref|XP_011655142.1| (PREDICTED: protein REVEILLE 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 1.7e-131
Identity = 261/369 (70.73%), Postives = 285/369 (77.24%), Query Frame = 1


Query: 95  FSKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLS 154
           F  VTRNSNGCST  +GCIEIPPPRPKRKPAHPYPRKEV  SHK S ISEQT SLSPQLS
Sbjct: 17  FINVTRNSNGCSTTSIGCIEIPPPRPKRKPAHPYPRKEVPQSHKASPISEQTRSLSPQLS 76

Query: 155 EKECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVP------SSLDNESPTAA--- 214
           EKECQSPTS VVA  SGSDTLMF +SRIHHDS SPDSS+P      SSLDNESPTAA   
Sbjct: 77  EKECQSPTSIVVAG-SGSDTLMFTDSRIHHDSGSPDSSIPSTEPNSSSLDNESPTAALGI 136

Query: 215 ---------APNLELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSS 274
                      NLELFTKD++ EKDDSTKE S+QSLKLFGRTVLI+DPHK TP +E    
Sbjct: 137 ENSIPHEKIPTNLELFTKDNVIEKDDSTKEVSIQSLKLFGRTVLITDPHKHTPILENSMP 196

Query: 275 KADSKPGENQKQISP-----RKSPTGNPESTWNHGAFYFIQLNNVDSNQGSGSTVPVSWW 334
           +AD KPGENQKQ+SP       S TGN + TWNHGAFYFIQLNN DS QG  S VPVSWW
Sbjct: 197 EADRKPGENQKQVSPWNSIVMDSSTGNTDCTWNHGAFYFIQLNNGDSKQGD-SAVPVSWW 256

Query: 335 SSYGSYPLSFVHCFNQAHSNPSREVDDREAHKDQSWCGSNTGSLNSGENDIQSS-----S 394
           SSYGSYP SFVHCF QA SNP+ +V+D+E HKDQSWCGSNTGS+NSGEN  + S     S
Sbjct: 257 SSYGSYPFSFVHCFKQADSNPN-QVNDKETHKDQSWCGSNTGSVNSGENGDKVSENDVES 316

Query: 395 SRVFQN--------RDEMIGKALSCELISSHEKNTKGFVPYKRCMTERATQSHTVTDTER 428
            R+F N        ++E+IGKALSCELISSHEKNTKGFVPYKRCM ERAT+ HT+T+ ER
Sbjct: 317 CRLFHNNRDGDSVSKEELIGKALSCELISSHEKNTKGFVPYKRCMAERATKPHTITEAER 376

[Close]

BLAST of CmoCh15G007940 vs. NCBI nr
Match: gi|659126396|ref|XP_008463162.1| (PREDICTED: protein REVEILLE 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 471.5 bits (1212), Expect = 1.6e-129
Identity = 258/369 (69.92%), Postives = 283/369 (76.69%), Query Frame = 1


Query: 95  FSKVTRNSNGCSTNLVGCIEIPPPRPKRKPAHPYPRKEVAHSHKLSSISEQTSSLSPQLS 154
           F  VTRNSNGCST  VGCIEIPPPRPKRKPAHPYPRKEV  S K S ISEQT SLSPQLS
Sbjct: 17  FMNVTRNSNGCSTTSVGCIEIPPPRPKRKPAHPYPRKEVPQSRKASPISEQTRSLSPQLS 76

Query: 155 EKECQSPTSTVVAATSGSDTLMFANSRIHHDSASPDSSVP------SSLDNESPTAA--- 214
           EKEC SPTS VVA  +GSDTLMF +SRIHHDS SPDSS+P      SSLDNES TAA   
Sbjct: 77  EKECPSPTSIVVAG-NGSDTLMFTDSRIHHDSGSPDSSIPSTEPNSSSLDNESLTAALGT 136

Query: 215 ---------APNLELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHKQTPTIETCSS 274
                      NLELFTKDD+ EKDDSTKE S+QSLKLFGRTVLI+DPHKQ+P +E    
Sbjct: 137 ENSIPHDNIPTNLELFTKDDVIEKDDSTKEVSIQSLKLFGRTVLITDPHKQSPILENSMP 196

Query: 275 KADSKPGENQKQISP-----RKSPTGNPESTWNHGAFYFIQLNNVDSNQGSGSTVPVSWW 334
           +AD KPG+NQKQ+SP       S TGN + TWNHGAFYFIQLNN DS QG GS VPVSWW
Sbjct: 197 EADRKPGDNQKQVSPWNSIVMDSSTGNTDCTWNHGAFYFIQLNNGDSKQGPGSAVPVSWW 256

Query: 335 SSYGSYPLSFVHCFNQAHSNPSREVDDREAHKDQSWCGSNTGSLNSGENDIQSS-----S 394
           SSYGSYP SFVHCF QA SN + +VDD+E HKDQSWCGSNTGS+NSGEN  ++S     S
Sbjct: 257 SSYGSYPFSFVHCFKQADSN-ANQVDDKETHKDQSWCGSNTGSVNSGENGDKASENDIQS 316

Query: 395 SRVFQN--------RDEMIGKALSCELISSHEKNTKGFVPYKRCMTERATQSHTVTDTER 428
            R+F N        ++E+IGKALS ELISSHEKNTKGFVPYKRCM E AT+SHT+T+ ER
Sbjct: 317 CRLFHNNRDGDSVSKEELIGKALSFELISSHEKNTKGFVPYKRCMAEGATKSHTITEAER 376

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BLAST of CmoCh15G007940 vs. NCBI nr
Match: gi|359476477|ref|XP_002267976.2| (PREDICTED: protein REVEILLE 1 [Vitis vinifera])

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 207/491 (42.16%), Postives = 276/491 (56.21%), Query Frame = 1


Query: 5   GGLCSNNMNSAVYESTVTPDQHSSANVQLKE-------FAPKARKPYTITKQRERWKDEE 64
           GG  SN   SA    ++    HS    +LKE        APKARKPYTITKQRERW +EE
Sbjct: 8   GGSRSNTFLSAGNLISLDAGTHSLTAAELKEQFSCRDDLAPKARKPYTITKQRERWTEEE 67

Query: 65  HDKFIEALKLYGRDWRQIEEHVGTKTAVQIRSHAQKFFSKVTRNSNGCSTNLVGCIEIPP 124
           H KF+EALKLYGR WR+IEEHVGTKTAVQIRSHAQKFFSKV R ++G +TN    IEIPP
Sbjct: 68  HKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVVRETSGGNTNSAEPIEIPP 127

Query: 125 PRPKRKPAHPYPRKEVAHSHK-LSSISEQTSSLSPQL--SEKECQSPTSTVVAATSGSDT 184
           PRPKRKP HPYPRK V    K +S +     S+SP    SE+E QSPTS + A   GS+T
Sbjct: 128 PRPKRKPVHPYPRKLVHPLRKGISVLEPPVRSVSPNFSASEQENQSPTSVLSAV--GSET 187

Query: 185 LMFANSRIHHDSASPDSSV--------------PSSLDNESP------TAAAPN------ 244
           L    S   + S SP SS               P + +N SP      +++ P+      
Sbjct: 188 LGSTLSNTQNGSPSPVSSAAGVNPDRMFLPELNPPTEENASPSPVLTTSSSVPDEPLPMK 247

Query: 245 LELFTKDDMHEKDDSTKEPSLQSLKLFGRTVLISDPHK-QTPTIETCSSKADSKPGENQK 304
            ELF + ++  K+ S +E S ++LKLFGRTVL++D H+  +PT         +  G + +
Sbjct: 248 FELFPQ-EIFAKECSVEEASTRTLKLFGRTVLVTDSHRPSSPTTSKSQPSDINNEGMHVE 307

Query: 305 QI----SPRKSPTGNPESTWNH------GAFYFIQLNNVDSN-QGSGSTVPVSWWSSYGS 364
            +    +P +S   N   +W+H      GAFY++     DSN   +G+T P+ WW+ YG 
Sbjct: 308 TLPWNSTPTESSPENSSFSWSHLQPQPSGAFYYMHFQKEDSNCVEAGTTAPLPWWTFYGG 367

Query: 365 YPLSFVHCFNQ----AHSNPS-REVDDREAHKDQSWCGSNTGSLNSGEN-----DIQSSS 424
            P+ F+   +Q    AH +    E  D+E  K+ SW GSNTGS+N G N     D+++ S
Sbjct: 368 IPIPFLPLHHQDSIKAHEDTKFAETHDKEIQKEGSWTGSNTGSVNEGGNCDTNWDVETQS 427

Query: 425 SRVF-QNRDEMIGKALSCELI---------SSHEKNTKGFVPYKRCMTERATQSHTVTDT 428
            + +    ++    A   +L          ++ +K  KGF+PYKRC+ ER TQS  +   
Sbjct: 428 HQPYLDTMEKESDSAFELKLSERSAFSRGRTNTDKCVKGFMPYKRCLAERDTQSSIIIGN 487

The following BLAST results are available for this feature:

BLAST of CmoCh15G007940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RVE1_ARATH	3.3e-50	53.59	Protein REVEILLE 1 OS=Arabidopsis thaliana GN=RVE1 PE=2 SV=1	[more]
RVE2_ARATH	1.4e-37	45.58	Protein REVEILLE 2 OS=Arabidopsis thaliana GN=RVE2 PE=2 SV=1	[more]
RVE7_ARATH	1.6e-36	45.89	Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1	[more]
RVE7L_ARATH	6.6e-35	54.38	Protein REVEILLE 7-like OS=Arabidopsis thaliana GN=RVE7L PE=3 SV=1	[more]
CCA1_ARATH	1.7e-30	70.53	Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1	[more]

BLAST of CmoCh15G007940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPX5_CUCSA	4.6e-184	75.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G341040 PE=4 SV=1	[more]
A5C7G8_VITVI	2.1e-75	41.96	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012100 PE=4 SV=1	[more]
D7TA25_VITVI	2.3e-74	42.56	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0079g00410 PE=4 SV=...	[more]
A0A067KI22_JATCU	4.3e-73	41.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10504 PE=4 SV=1	[more]
B9SKS0_RICCO	3.6e-72	43.40	DNA binding protein, putative OS=Ricinus communis GN=RCOM_1604380 PE=4 SV=1	[more]

BLAST of CmoCh15G007940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17300.1	1.8e-51	53.59	Homeodomain-like superfamily protein	[more]
AT5G37260.1	8.1e-39	45.58	Homeodomain-like superfamily protein	[more]
AT1G18330.2	8.9e-38	45.89	Homeodomain-like superfamily protein	[more]
AT3G10113.1	3.7e-36	54.38	Homeodomain-like superfamily protein	[more]
AT2G46830.1	9.5e-32	70.53	circadian clock associated 1	[more]

BLAST of CmoCh15G007940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702140\|ref\|XP_011655141.1\|	6.6e-184	75.11	PREDICTED: protein REVEILLE 1-like isoform X1 [Cucumis sativus]	[more]
gi\|659126394\|ref\|XP_008463161.1\|	4.4e-180	73.81	PREDICTED: protein REVEILLE 1-like isoform X1 [Cucumis melo]	[more]
gi\|778702143\|ref\|XP_011655142.1\|	1.7e-131	70.73	PREDICTED: protein REVEILLE 1-like isoform X2 [Cucumis sativus]	[more]
gi\|659126396\|ref\|XP_008463162.1\|	1.6e-129	69.92	PREDICTED: protein REVEILLE 1-like isoform X2 [Cucumis melo]	[more]
gi\|359476477\|ref\|XP_002267976.2\|	1.3e-75	42.16	PREDICTED: protein REVEILLE 1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G007940.1	CmoCh15G007940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 50..93 score: 8.5
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 49..97 score: 6.7
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 48..97 score: 4.4
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 50..90 score: 9.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 44..99 score: 2.92
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 45..99 score: 20
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 12..243 score: 8.6
None	No IPR available	PANTHER	PTHR12802:SF60	PROTEIN REVEILLE 1-RELATED	coord: 12..243 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G007940	CmaCh15G007640	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G007940	CmaCh04G022720	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G007940	Cla009130	Watermelon (97103) v1	cmowmB269
CmoCh15G007940	Csa5G341040	Cucumber (Chinese Long) v2	cmocuB292
CmoCh15G007940	MELO3C025091	Melon (DHL92) v3.5.1	cmomeB247
CmoCh15G007940	ClCG01G008570	Watermelon (Charleston Gray)	cmowcgB248
CmoCh15G007940	CSPI05G13630	Wild cucumber (PI 183967)	cmocpiB301
CmoCh15G007940	Lsi09G008980	Bottle gourd (USVL1VR-Ls)	cmolsiB256
CmoCh15G007940	Cp4.1LG13g05530	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G007940	Cp4.1LG01g19700	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G007940	MELO3C025091.2	Melon (DHL92) v3.6.1	cmomedB282
CmoCh15G007940	CsaV3_5G020580	Cucumber (Chinese Long) v3	cmocucB0353
CmoCh15G007940	Cla97C01G008850	Watermelon (97103) v2	cmowmbB271
CmoCh15G007940	Bhi12G001038	Wax gourd	cmowgoB0367
CmoCh15G007940	CsGy5G013560	Cucumber (Gy14) v2	cgybcmoB589
CmoCh15G007940	Carg01439	Silver-seed gourd	carcmoB1118

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G007940	CmoCh04G023770	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G007940	Cucumber (Gy14) v1	cgycmoB0605
CmoCh15G007940	Cucumber (Gy14) v1	cgycmoB0739
CmoCh15G007940	Melon (DHL92) v3.5.1	cmomeB240
CmoCh15G007940	Melon (DHL92) v3.6.1	cmomedB272
CmoCh15G007940	Melon (DHL92) v3.6.1	cmomedB273
CmoCh15G007940	Silver-seed gourd	carcmoB0714