CmoCh15G007350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G007350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein 50a, putative
Location	Cmo_Chr15 : 3598749 .. 3602054 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGATCGATGGGAGCTGTGCTGTCATTCAGTTCATATTAGCTTTTCCAAATCGTCCCGTCTCAAATCTCTAGCGCAAGGAGAAGGCAAAAGAAAGGAGCCACAAATGGATTTGGCGGAGCTGTGGTCAATTTTCGGCCCTGGCGTCGCCGGAGCTGTGTTTGGTGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCAGTTTCCTTCGTCCACTACCTCCCAGGTTCTTTATTCTCGCCTCGCGCTTTATTCATTTGCGAGTTCGTTAGGGTTTTTGACGGTGGTTTGGTATTGGGGTTGTAGGTATTTTTGCTTCTATTGCGGCTTTGATGTTCAATTGCGTTCGCAGAGAAGACATCGATTATTCTCCATATGAGGAGGGCGAATGGAGGTGAGAAGTTTTTGTCTTATCTACTAATCATGTTATGACCCTCTTTGTCTGATCATTCGTCTCGATTGAAAGCAATGTCACTGTGTTCTTCTTCGATGAGTTGATGTGGGTTGTGATTTAGTACCTTGTTAGGATTATTCTCCCTGGATGTGTTAGGATCTTATGAACTCGTCTCATACACCTGGGTCTTAATTCGTGATTTGCAATTTAGAATATCGGATGCACTTCGATTCAAACCTTGCGTGTTTGCAATAGAAGTTGGGGTAGGGCTTGGTTGGAGCACTCATCAGGAACTTTGAACCTGTGCAATTGAATATTATAAGCTTGGATAAGATGAAAAATCAAACAGGAAACACAAGTTAAACATTGTGTCAATGGCCGTGTTTTGTAAGAGCAATTTAGAGATGCAATTTCTGCACCGAGACTTCTCTCTTTTTTTTTTTCTTTTTTCTTGCGAGCAACATTTATACTGTACTGAATATTAATTGGACATCCCATCAATCAATTCTCTTCTACCCTTTTTGATCCATCTCTCCAATTTAGTGGGTTGAGTAGAGAAGGAACTAAGGGGCAAGAGTGAGGTTGTTCAGGAAGTACGTAAATGCGTGCCTAGTGATAGGAGAGTTGGTGGTGAAGAGCATGCATGTGCATAACTATCAGGAACGGAAACACAGAACGTAACTTCCTGATAGAATGGTCCAAGTGATAGTAAACATTAGCGAAGAGCCATCGAAAGTGTGATGTATTAGAGATTGTGATGCTCAATAGCTAAGATAGAAGAGTCGCTACTCATCTTGATTTTGTATGGAAATAAAAATTTTGTTACTTGAAAATCTCTTTTTAACATTTATCATTCCTCCCAAACATCATATCTTATAGGATTGCTATCTCAGGATTAAGATGCATTTGACGAGATACACGACCTAAAGAGATTTATAGATCAATCTAGTGGTTGGGGAAGAGGAAGCTTCACTCACTAAACTACAAAAGGTGATCCTTCAATTGGAGAATAATCATTAAAATACAAGAATTATGAAATAGTTTTTTGTGGTTTGATCACTGTCTAGAGGTAGTATGCTGTATACGATATTTCAAAGGGTATCCTTCGGAGCGGACGTATCTTAAAAGAAAATTCATTGACTTGTCTTTTTCCAAATAGACCAAAGAAGATCTTTAACTGCACAATTCTAAAGATCCTTTGCCTGCCTTTAAAAAGCCATGCCCGCAAGAATTTTCATCAAGTATAGGCCCATCTGTCTAGGAAGACAAACTGAATACAAATTCTAGCAAAAGAAAAGACCAGCCGATTATCTATCAAAGCCCGATTGTTCATCAAAATGAAAAAAGAAAAAAAAGAAAAAGAAGAAGACTGACCAGCCGACAAGAGAAAAAGAACAATAGGGGAAGAAAGGAGTAACAAAAGGATGATGAAACGAGAAAAAGTTGACTTAGACCAGAACGGGCCCTTCAATTTTTGCTAGTTTTAGAAGGAATTAGCAGGTGCCTGTTTTAGAAACTGTTCTCTTTTTCCAGGCAGCAGAAGCCAGAGTTTCCTGCTGTGCTTACAGCTCAGTTGCAAATGTTCTGGTTATCTGCTTATTGAAGGTGTAGGATGAGTTAATATTTCTTCAAAAAAAAAAAATTATATGCCCTCCGCTTTCATGCTAAACTAGAATATTGGTTCATGTTGAATTAATATGCTAGTTATCTGGTAGTTTTTACTTAGAATATCATGGAAATAAGCCTCACATTTTAGACCTATAAGCATACGAAAGTTAGATGAATCCGCTGATAGCATTGTGAATTTGATGTTTATGTTAATGTGGTGATAGTGTCTTTCTGTAATTAACTATACTGACGCTTCCCTCGACAACAGATTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCAGTAGTAAAAACAGGGCCATCAGTGTGGACAGGAGTCGCAGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAGGTAAATTGGCCTTCCCCGTTTTGATCATCTTAATTCTTATTTCTCCCATCTGTCTTCTATTAGGATTTGTGCCAAAAACATGCAGCCACTTTTTATTATCCACTCCACCTAGTTTGTCGTGGAATCATTCTGCAAGGCACTCTATGAAAGAAAAACTTATGGGGTTCTTTCATCTTGATGTTTCTCTTGATTTTGAGCATGACCGATATAGTAACATCTATGTTCCACTCTCTCTAAATCTACATAAGATGTTTTAATCATGCCATAAACGAAGTTTTTGCTTGAACAGGGATAGTTTCTGTTTAGCCATCTGATGCTGAATCAATAGATGCCCTTAATATTTTTTGGTATTCATTGCATTATTTCTGTAGAAAAACAAAATCATTGGGGGGTTTCATCACTAGCACAAGTATCACGTATAACTAACCAATACCATCTCTCAGGAACATGATCTGTTTCTTTTTTGGAGGTTCTTATAATGTTATTGACCATTTATGTTTTTTCCTGAAATACTGTCTGTTGCAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAAGACGTAAGAGGCTGAAGAATTACCAACTTCATATAGCTCCAGTGGACTGCAGACTACAGTGTGAGTCATTTGTGTGTATCATTTGACTTTTCCAACTATGGAACCAAAGGGCTTTTCTACTTGTAAATGTCATGTTAATTTCAAGCTGAAACCATGTCTATATGTCTTTATGCATTCAATATAAGTGAGTCAGATATTCAATCTTTCAGCCATTTCAGCTTTGTTGGTTTCATTTTTGTTCTTTTTTCCCTTCAAAACTGCTGTGAATTGAAGAAAATGAAAATATATATATAAACTTCGATAAAGTTCGA

mRNA sequence

TGAAGATCGATGGGAGCTGTGCTGTCATTCAGTTCATATTAGCTTTTCCAAATCGTCCCGTCTCAAATCTCTAGCGCAAGGAGAAGGCAAAAGAAAGGAGCCACAAATGGATTTGGCGGAGCTGTGGTCAATTTTCGGCCCTGGCGTCGCCGGAGCTGTGTTTGGTGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCAGTTTCCTTCGTCCACTACCTCCCAGGTATTTTTGCTTCTATTGCGGCTTTGATGTTCAATTGCGTTCGCAGAGAAGACATCGATTATTCTCCATATGAGGAGGGCGAATGGAGATTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCAGTAGTAAAAACAGGGCCATCAGTGTGGACAGGAGTCGCAGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAAGACGTAAGAGGCTGAAGAATTACCAACTTCATATAGCTCCAGTGGACTGCAGACTACAGTGTGAGTCATTTGTGTGTATCATTTGACTTTTCCAACTATGGAACCAAAGGGCTTTTCTACTTGTAAATGTCATGTTAATTTCAAGCTGAAACCATGTCTATATGTCTTTATGCATTCAATATAAGTGAGTCAGATATTCAATCTTTCAGCCATTTCAGCTTTGTTGGTTTCATTTTTGTTCTTTTTTCCCTTCAAAACTGCTGTGAATTGAAGAAAATGAAAATATATATATAAACTTCGATAAAGTTCGA

Coding sequence (CDS)

ATGGATTTGGCGGAGCTGTGGTCAATTTTCGGCCCTGGCGTCGCCGGAGCTGTGTTTGGTGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCAGTTTCCTTCGTCCACTACCTCCCAGGTATTTTTGCTTCTATTGCGGCTTTGATGTTCAATTGCGTTCGCAGAGAAGACATCGATTATTCTCCATATGAGGAGGGCGAATGGAGATTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCAGTGGGACTCTTGATACAAGATTCAGTAGTAAAAACAGGGCCATCAGTGTGGACAGGAGTCGCAGGAGTATTGCAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAA

Homology

[Close]

BLAST of CmoCh15G007350 vs. TrEMBL
Match: D6BRE9_JATCU (Transmembrane protein 50a, putative OS=Jatropha curcas GN=JCGZ_12032 PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 5.9e-69
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELW+IFGPGVAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGVAGAVFGTGWWFWIDAVVCSSVKVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VKTGPSVWTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. TrEMBL
Match: A0A061FHN0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035011 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 7.7e-69
Identity = 126/135 (93.33%), Postives = 132/135 (97.78%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDL ELW+IFGPGVAGAVFGAGWWFW+DAVVCSSV VSFVHYLPGIFASIAALMFNCVR+
Sbjct: 1   MDLGELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVTVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VK+GPSVWTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. TrEMBL
Match: A0A067GZQ4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032718mg PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.9e-68
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELW+IFGPGVAGAVFGAGWWFW+DAVVCSSV VSFVHYLPGIFAS+AALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. TrEMBL
Match: V4V5R2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002818mg PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 124/135 (91.85%), Postives = 130/135 (96.30%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELW+IFGPGVAGAVFGAGWWFW+DAVVCSSV V FVHYLPGIFAS+AALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVPFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLF AYVVSFVSLAASVGLLIQDS+VKTGPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. TrEMBL
Match: B9GUG4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08980g PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-67
Identity = 124/135 (91.85%), Postives = 129/135 (95.56%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDL ELW+I GP VAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFASIAALMFNCVR+
Sbjct: 1   MDLPELWAILGPAVAGAVFGTGWWFWIDAVVCSSVTVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VKTGPSVWTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. TAIR10
Match: AT1G36980.1 (AT1G36980.1 unknown protein)

HSP 1 Score: 255.4 bits (651), Expect = 2.0e-68
Identity = 118/135 (87.41%), Postives = 127/135 (94.07%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELW+IFGPG +GAVFG GWWFWVDAVVCSS+ V FVHYLPGIFAS+ ALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPY+EGEWRLKLWLF AYVV+FVSLAASVGLLIQDSVVKTGPS WTGVAGV QCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGL+YWTSHSE
Sbjct: 121 FVLISGLMYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. NCBI nr
Match: gi|659121035|ref|XP_008460472.1| (PREDICTED: transmembrane protein 50 homolog [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-71
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVLVSGLIYWTSHSE
Sbjct: 121 FVLVSGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. NCBI nr
Match: gi|449445118|ref|XP_004140320.1| (PREDICTED: transmembrane protein 50A [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 2.0e-70
Identity = 132/135 (97.78%), Postives = 133/135 (98.52%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVLVSGLIYWTSHSE
Sbjct: 121 FVLVSGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. NCBI nr
Match: gi|821324960|ref|NP_001295740.1| (transmembrane protein 50A [Jatropha curcas])

HSP 1 Score: 268.1 bits (684), Expect = 8.5e-69
Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDLAELW+IFGPGVAGAVFG GWWFW+DAVVCSSV VSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGVAGAVFGTGWWFWIDAVVCSSVKVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VKTGPSVWTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. NCBI nr
Match: gi|590598579|ref|XP_007018937.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-68
Identity = 126/135 (93.33%), Postives = 132/135 (97.78%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDL ELW+IFGPGVAGAVFGAGWWFW+DAVVCSSV VSFVHYLPGIFASIAALMFNCVR+
Sbjct: 1   MDLGELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVTVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VK+GPSVWTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of CmoCh15G007350 vs. NCBI nr
Match: gi|1000977990|ref|XP_015571620.1| (PREDICTED: transmembrane protein 50A [Ricinus communis])

HSP 1 Score: 266.2 bits (679), Expect = 3.2e-68
Identity = 126/135 (93.33%), Postives = 132/135 (97.78%), Query Frame = 1


Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60
           MDL ELW+IFGPGVAGAVFGAGWWFWVDAVVCS+V VSFVHYLPGIFASIAALMFNCVR+
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWVDAVVCSAVKVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VK+GPSVWTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLVSGLIYWTSHSE 136
           FVL+SGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

The following BLAST results are available for this feature:

BLAST of CmoCh15G007350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh15G007350 vs. TrEMBL


Match Name	E-value	Identity	Description
D6BRE9_JATCU	5.9e-69	93.33	Transmembrane protein 50a, putative OS=Jatropha curcas GN=JCGZ_12032 PE=2 SV=1	[more]
A0A061FHN0_THECC	7.7e-69	93.33	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035011 PE=4 SV=1	[more]
A0A067GZQ4_CITSI	2.9e-68	92.59	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032718mg PE=4 SV=1	[more]
V4V5R2_9ROSI	1.1e-67	91.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002818mg PE=4 SV=1	[more]
B9GUG4_POPTR	1.5e-67	91.85	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08980g PE=4 SV=1	[more]

BLAST of CmoCh15G007350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G36980.1	2.0e-68	87.41	unknown protein	[more]

BLAST of CmoCh15G007350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121035\|ref\|XP_008460472.1\|	5.3e-71	98.52	PREDICTED: transmembrane protein 50 homolog [Cucumis melo]	[more]
gi\|449445118\|ref\|XP_004140320.1\|	2.0e-70	97.78	PREDICTED: transmembrane protein 50A [Cucumis sativus]	[more]
gi\|821324960\|ref\|NP_001295740.1\|	8.5e-69	93.33	transmembrane protein 50A [Jatropha curcas]	[more]
gi\|590598579\|ref\|XP_007018937.1\|	1.1e-68	93.33	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|1000977990\|ref\|XP_015571620.1\|	3.2e-68	93.33	PREDICTED: transmembrane protein 50A [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007919	UPF0220

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G007350.1	CmoCh15G007350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007919	Uncharacterised protein family UPF0220	PANTHER	PTHR13180	SMALL MEMBRANE PROTEIN-RELATED	coord: 2..135 score: 9.3
IPR007919	Uncharacterised protein family UPF0220	PFAM	PF05255	UPF0220	coord: 13..133 score: 9.5
None	No IPR available	PANTHER	PTHR13180:SF3	SUBFAMILY NOT NAMED	coord: 2..135 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G007350	Cucsa.034430	Cucumber (Gy14) v1	cgycmoB0018
CmoCh15G007350	CmaCh15G007150	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G007350	CmaCh04G023250	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G007350	Cla002138	Watermelon (97103) v1	cmowmB253
CmoCh15G007350	Csa5G387940	Cucumber (Chinese Long) v2	cmocuB280
CmoCh15G007350	MELO3C022783	Melon (DHL92) v3.5.1	cmomeB240
CmoCh15G007350	ClCG03G009110	Watermelon (Charleston Gray)	cmowcgB250
CmoCh15G007350	CSPI05G14400	Wild cucumber (PI 183967)	cmocpiB289
CmoCh15G007350	Lsi09G009740	Bottle gourd (USVL1VR-Ls)	cmolsiB256
CmoCh15G007350	Cp4.1LG13g05130	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G007350	Cp4.1LG01g20060	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G007350	MELO3C022783.2	Melon (DHL92) v3.6.1	cmomedB273
CmoCh15G007350	CsaV3_5G023520	Cucumber (Chinese Long) v3	cmocucB0337
CmoCh15G007350	Cla97C03G060260	Watermelon (97103) v2	cmowmbB283
CmoCh15G007350	Bhi12G001117	Wax gourd	cmowgoB0367
CmoCh15G007350	CsGy5G014380	Cucumber (Gy14) v2	cgybcmoB574
CmoCh15G007350	Carg01494	Silver-seed gourd	carcmoB1118
CmoCh15G007350	Carg18239	Silver-seed gourd	carcmoB0714

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G007350	CmoCh04G024310	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G007350	Cucurbita pepo (Zucchini)	cmocpeB289
CmoCh15G007350	Bottle gourd (USVL1VR-Ls)	cmolsiB251
CmoCh15G007350	Bottle gourd (USVL1VR-Ls)	cmolsiB271
CmoCh15G007350	Cucumber (Gy14) v2	cgybcmoB459
CmoCh15G007350	Silver-seed gourd	carcmoB0915
CmoCh15G007350	Cucumber (Chinese Long) v3	cmocucB0333
CmoCh15G007350	Watermelon (97103) v2	cmowmbB280
CmoCh15G007350	Wax gourd	cmowgoB0404
CmoCh15G007350	Cucurbita moschata (Rifu)	cmocmoB245
CmoCh15G007350	Cucurbita maxima (Rimu)	cmacmoB465
CmoCh15G007350	Wild cucumber (PI 183967)	cmocpiB284
CmoCh15G007350	Cucumber (Chinese Long) v2	cmocuB276
CmoCh15G007350	Melon (DHL92) v3.5.1	cmomeB273
CmoCh15G007350	Watermelon (Charleston Gray)	cmowcgB242
CmoCh15G007350	Watermelon (97103) v1	cmowmB254
CmoCh15G007350	Watermelon (97103) v1	cmowmB279