CmoCh15G007190 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G007190
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionBiotin holocarboxylase synthetase, putative
LocationCmo_Chr15 : 3493018 .. 3498252 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACCAGTCCAACCTGTGCGTTGTTCTTGAGTGGAAAAACGGCGGCTGACAATGAAACTGTCAAATTGCTCAAGAGGAATGACACTTTGAAGCTCCCTGACCATACTGAAATTTCGGTTTTCTTGCATTCAGAAAGGGATGAATTCCTGGAGGAAATTGGGTTTCGAATTGATTCGTATTTGAATGCTCTTTCTACCAATACTTTCGGTAGATTCGTCATTTGGTGTAAACAGATTCCTTCTACTCAGGATATCATTTCTCAGTGGGTGTAACGATGCATTTCTTTTTCCTCCCCGCCATTTTTTCATTCTTTGACGATCCAGCTATCTCTTGTAACAGCAACTTCGACCTTCCCCTGGGTACAGTCTGCGTGGCTGATGTTCAGTTCAAGGGAAGAGGTGAGTAGTGCTCATAATCAACCACAAACTGGTAGCCTTATATGTGAGTCCTTGAATTCCTCTTTGTATTGAAAGTCATTATGTGGATTTAAGTGAAGGTCGATCGAAGAATTTGTGGGAATCTCTCCCTGGTTGCCTTATGTTGGGCGTATTGTTCCTCTATTACAGTATGTGATGTCTCTTGCTATTACTGAGGCCATTAAAGATCTTTGCGACAAAGAGGGAACTTTTGTCCTTTTTGGCCCATATTAGAAACTCTTACCTGAAATCTTTGTTAAAAAATGGGAACTCAGTCTCTTAGCTGAAAATTTTGATAAACTGGTGGTGCTAAATTATGAATGAAAAGTTCATGTTTTGTTTTTTTAATGAAAGCAAGGAAAACGAGTGGTGTTAGTTTAATAGCGCACAGATGTCTCAATGGCTAAATTACCAAACCTTAGGAGGGGGGAATGAAGTTGGACAGCCCAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGGTTTTTCCTTTCGGGCTTCTTCTTAAGGATTTTAAAACGCATATGTTAGAGAGAAGTTTCTACACCCTTATAAAAAATACTTTGTTCTCTCCAATCGATGTGGGAGCGGTGTGCTAGTGCGGACGTTGGATCCCCAAGGGCACCGATTGTGAGATCCGATCTCAGTGGGGGAGGAGAACGAAGAGAACGAAACATTCTCTATAAGGGCGAGGAAACCTCTCCCTAACAGATGCGTTTTAAAAACCTTGAGGTGGAAGCCCAAATCGAAAAGTCCAAAGAGGACAATATCTGCTAGCAGTGAGCTTGGACGGTTATAAAAACATATGGTAATGGTCGGAGGAAACAGTTTGTTTGAAAGAAACTAGAGGGACTTGAGGAATAGATGGGGATTCAAGTCATGGTAGACTAGCTTCCAACATTCAGAACTGGTCTAGTACACTATCGAGATGATTCAACGCCATTATATGTTTCACTATTTCCACCGTGCCAACGACACTATCCATTCCATTGATGTTATGAATATTATTTGTAAATAGTGCTGCACTTGAGTTGAGGTTAATACTGCTCATTCTCTGTGGGTCCGTACAGGGTTTACCCTCTATTGATTTGAAAATATAGTGGCCAAATGATCTTTACGTGAATGGCCTGAAAGTTGGAGGCATTCTGTGCACTTCAACATATAGATCGAAGAAGTTCAATGTTACTGCTGGTGTGTTGGTTTCTTTCCGTCTAACCTTCTTCTACATTCTGTTTTTGTAACAGTCCAAGCCCACCGCATACAGATGTTGTCCTCTTTAGGCTTTCCCTCAAGGTTTTTAAAACACGTCTGCCAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCATTTCTGAATGTGTTAATGTGAACATCATTCTATCACTTCCTGCTGTTCGTTGCCTTAAAGGTTTTGTGCATGAGAAGCATTTGGCTTCTACTTATGGCATAAAGGATTGGAGGATTTCGGATCAATAATTATACGTAAAGGATATCTTCCAAAGTTTTCTAGCTACATATCCATCAAGTTTGTGAAGATGATAGCTATACCATATATGCAATGTGGGGGTGTGAGAGAGTGCTCTAAGATATTGTTCATATAAGATGTGTATATATATTAATTTGGTGTAATCATTCTTTCCTTTTATGTATTAAGTCATTCTCCTACATAACAAGGCTATATATCTTACTATCTATATCATTCCATTTAAATTTAGATGATACCCGAGCAAGAGATTTTGTGTTCAAACGCCTTTGATGTCATGTCCTCCCCCATTAACATTGGTTTCTACTTGTTGGGTCATCTACAAATTTTCAAGCTCACAAGTGAGTGGAGTGTTTAAGTATATAATTGATTGGTGATTTAACAATCTTGTTCTCACTTGAAAAGGCTAGAACTTTTGTAGCACACGTATTTCGTTTAATGCTACATGCTTGTTCTGTTTACCTCATGTTTGCTCTGCTTCAGTTTCAAAATTTCCCTGGTGACCTCATTCTCACTAAATCCATGAATAATGCCACTTTGTTATCATCATTTTTTGATTAAGTAGGGTTTCGAGCTCTCGAGGAACTCTACTATCAGACATGGTTGCACAGGTAACTCAACACGTTCTGTTCCAGGATTCTCACGATTATGCTTTGTTGTTTACATTGTCTATACTTACGTTTCATGGAACGAAAAACGTCTTGGATATGGACTATGTTGTTTGATTTTTTTAGTTCTTGATGTCTATGAGCTAGGACTATTGCGCAAGTTATGCCAAGTAGGTTTTATAATTCTTTTCCTATAGATATGATCTTGTTACATCTGTCTATGTAGTGGGCAAAGAGTTATTGTACAGGAAAAGAAAGATGATCAAGAAGTGGAAAATGTTGTCACTATTCAGGTACGTGAGATCTGATTGATAGCTAATTCTGTGACAGCTCTATGCTGCAGTCTTAATCCCACTACTTTTGTGAGATCCTACGTAGCCTCTCCCTAGTAGACACGTATTAAAACTGTGAGGTTGATGACAATACGTAATGGGTCAAAGCAGACTATCTGCTAGCAGTGTACTTGAGCTGTTACAAATGATATGAGAGCCAGGCTCTTGACAATATGCCAGTGAGGACGCTGGGCTCCCAAAGGAGGTGGATTGTGAGATCCCATATCGGTTGGAGAGGGGAACGGGTTCAACTTAGTAACGGAGAGTTCTTAGGTCACCATCTTCTATGATTTTCATGGTTTTGAAAACTGGAATTGATTGCTTATTGGTTCAGAAATTTGCTTGTTTCGTTATACAGGGGCTGACATCTTCAGGACATTTGCTAGCTATTGGAGATGACAGCCAAATGTGCGAGCTTCATCCAGATGGGAATAGGTAAGTACTTGAATTGATTCAAACTTGGACTTGTTTTTGAAAATCTGGATATGAAGTTGATTACAAACGAACGAATTTATAGGTAGAAGTAGCGTTTATAAGCTTAATTTTCAAAAATCAAAAATAAAAAACTAAGACACCGTGCAATAATGTTTATAAGCTTACTTTTTTAAAACAGAAAATTAAAAATAAAATCGTTAACAAACGGGCCTAAACTAAATCGTTATCATTTACAAAATCGACAATGAAGTTCATTCCAAATTCTTCCATGACTAAGAAACAGTGGTCAATAAAGTTTAACGTCTCAAAGTGCTTTAGAATCAATTATAATGATTGTAAGATGACTGCCCTGTTAGCCAATCAATCAATACCGTAGTTTCTGCTAATACTCATTTCGCTGAAACTTTTAATTGTTAGTTGTTGCTTGAATGTCCTTTTGAACTAAGCTGGCATGCATATCTCACAACCCCAAGCATGAATTCATCTCCAAATGCAATGACTGTAGAGATTTGATCTTAAATCTAATGATCATGTCATCTTCCTCTTGTTCTTCAGGAGGAAACTGGTGTGAGAATACTGCTTTTTTTTTTTTTTTTTTTTCACTTTGGATTATGAGCTGTATGGAATGGAATCATGTGCAATACAAAGGAGAAAGATTATCTTACTTTTTATGATTAAACAATGAGATTCTACTGAAGATGTAAATGTTATTCATATTTAACCTTACTAAAGAGGGTCCATAGTCAAGAACATGCTGTATTTTTATATCATTCCAATGAACGTGAAGGAATTTCTAGTGGGACAATTGGTATAATCAGTCAGTCAGTCAGCAGTTCTTTTTTATTAGAAATTTGAAGAGATCCTTTGCCACTTTATTGCCAGCTGTTGAGCTTGAAATGAAACTCCGTTATGACAGAAGGTGTTGTGTTGTGTTGGTGAAACGGATGCAGCTTATTTGAACTTTACAACTGTGAATTGAGTGAAAAAGAAACAGAAGGGCAAAAGATTCTTGTGGCGAGGCGCCATGTCAGACCCAGAAACTGGTATGTCTTCTTCTGTCTATTTCCTTATACGGCTATTGGAGCTTTTTGTTTAGGGTTCACTATCAGAAGAGAGAAAAAAGGGGCTGGCTTGCCACATGCACTACAGTGGATGGATTCAATAAACAAAAGGGGTCCCATATTAGGATTCTCCCAATAGTTTCATGTCTTAGCTTCGTCAATATCCGATGAATTTACCGTATATGCGATATGTAACGGTCTAAACCCACCACTAGCAAATATTGTCCTCTTTAGGCTTTTCCTCAAGGTTTTTAAAACAAGGTTTCCACACCTTTACAAAGAATATTTCGTTCTTCTCCCCCAACCGATGTGGGATCTCACAATCCACCCACCTTCGGGGCCCAATATCCTTACTGGCACACCGTCTCGTGTCCATCCCCCTTTGGTGCACAGCCCACGACTAGTAGATATTGTCCTCTTTGAGCTTTTCCTTCCGGGCTTCCCCTCACAGTTTTTAAAACGCGTCTGTTAGGGAGAGGTAGGATCTCATACCGTATGTTTGACTATATTATTAAAGCTACATGGCAGGTTGATTCTGAATTGTGAGTTTAGTGGGTATGTGATATATGGTTACCATATTATTATAGCTACATGGCAGGTCGGTCAATTTCGAGCTGGTTAGGGTGTTTGTTTGGTAGTGTAAGCATTAAAACAATGGCGTTAACAACACGAAATGATCAGATACTAAGTCAGTAGAAACTTGACGAAACTTTGAGATGACCCATGTCTAAAAAAGGCAGGTTTGTTGAGTTTTGGGAGGCTGGGGGCCATGGAAGGACAGAGTTGGCGGTGGGGAGGTGTCCTGATGTGTGGAGTTGAGGTAGCCAGCAACTGTGAAACTGGGCTTATGTTAAGCTTACAATGATGATGATGATGATGCAGCAGTGGCAAGTAA

mRNA sequence

ATGGACACCAGTCCAACCTGTGCGTTGTTCTTGAGTGGAAAAACGGCGGCTGACAATGAAACTGTCAAATTGCTCAAGAGGAATGACACTTTGAAGCTCCCTGACCATACTGAAATTTCGGTTTTCTTGCATTCAGAAAGGGATGAATTCCTGGAGGAAATTGGGTTTCGAATTGATTCGTATTTGAATGCTCTTTCTACCAATACTTTCGCTATCTCTTGTAACAGCAACTTCGACCTTCCCCTGGGTACAGTCTGCGTGGCTGATGTTCAGTTCAAGGGAAGAGGGTTTCGAGCTCTCGAGGAACTCTACTATCAGACATGGTTGCACAGATATGATCTTGTTACATCTGTCTATGTAGTGGGCAAAGAGTTATTGTACAGGAAAAGAAAGATGATCAAGAAGTGGAAAATGTTGTCACTATTCAGCTTATTTGAACTTTACAACTGTGAATTGAGTGAAAAAGAAACAGAAGGGCAAAAGATTCTTGTGGCGAGGCGCCATGTCAGACCCAGAAACTGCAGTGGCAAGTAA

Coding sequence (CDS)

ATGGACACCAGTCCAACCTGTGCGTTGTTCTTGAGTGGAAAAACGGCGGCTGACAATGAAACTGTCAAATTGCTCAAGAGGAATGACACTTTGAAGCTCCCTGACCATACTGAAATTTCGGTTTTCTTGCATTCAGAAAGGGATGAATTCCTGGAGGAAATTGGGTTTCGAATTGATTCGTATTTGAATGCTCTTTCTACCAATACTTTCGCTATCTCTTGTAACAGCAACTTCGACCTTCCCCTGGGTACAGTCTGCGTGGCTGATGTTCAGTTCAAGGGAAGAGGGTTTCGAGCTCTCGAGGAACTCTACTATCAGACATGGTTGCACAGATATGATCTTGTTACATCTGTCTATGTAGTGGGCAAAGAGTTATTGTACAGGAAAAGAAAGATGATCAAGAAGTGGAAAATGTTGTCACTATTCAGCTTATTTGAACTTTACAACTGTGAATTGAGTGAAAAAGAAACAGAAGGGCAAAAGATTCTTGTGGCGAGGCGCCATGTCAGACCCAGAAACTGCAGTGGCAAGTAA
Homology
[Close]
BLAST of CmoCh15G007190 vs. Swiss-Prot
Match: HCS2_ARATH (Biotin--protein ligase 2 OS=Arabidopsis thaliana GN=HCS2 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 8.6e-13
Identity = 37/112 (33.04%), Postives = 67/112 (59.82%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFL--EEIGFRI 60
           MD   +C+L L GK++ + +T   LK N+ LKLPD++++S+FL SE    +  ++  F +
Sbjct: 1   MDIDASCSLVLYGKSSVETDTATRLKNNNVLKLPDNSKVSIFLQSEIKNLVRDDDSSFNL 60

Query: 61  DSYLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
             ++N++ST+ F               +  ++  ++P+G+VCV+D+Q KGRG
Sbjct: 61  SLFMNSISTHRFGRFLIWSPYLSSTHDVVSHNFSEIPVGSVCVSDIQLKGRG 112

[Close]
BLAST of CmoCh15G007190 vs. Swiss-Prot
Match: HCS1_ARATH (Biotin--protein ligase 1, chloroplastic OS=Arabidopsis thaliana GN=HCS1 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-12
Identity = 37/112 (33.04%), Postives = 66/112 (58.93%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFL--EEIGFRI 60
           M++  +C+L L GK++ + E  K LK  ++LKLPD+T++S+ L SE    +  ++  F +
Sbjct: 39  MESDASCSLVLCGKSSVETEVAKGLKNKNSLKLPDNTKVSLILESEAKNLVKDDDNSFNL 98

Query: 61  DSYLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
             ++N++ T+ F               +  ++  +LP+G+VCV D+QFKGRG
Sbjct: 99  SLFMNSIITHRFGRFLIWSPRLSSTHDVVSHNFSELPVGSVCVTDIQFKGRG 150

[Close]
BLAST of CmoCh15G007190 vs. TrEMBL
Match: A0A0A0LBN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G455650 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD SPTC+L LSGKTA +NET KLLKRNDTLKLPD TEISV LHSE+D+ LEE GFRID 
Sbjct: 61  MDASPTCSLVLSGKTAVENETAKLLKRNDTLKLPDDTEISVLLHSEKDKPLEENGFRIDL 120

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           YLNALST+TF               +  ++  +LPLG VCVADVQFKGRG
Sbjct: 121 YLNALSTDTFGRFLIWSPRVPSTQDVISHNFSNLPLGAVCVADVQFKGRG 170

[Close]
BLAST of CmoCh15G007190 vs. TrEMBL
Match: M5XAL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007504mg PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD + +CAL L GK++A+NET K LK +  LKL D+TE+S+ LHSE  + ++E  F +DS
Sbjct: 38  MDGNSSCALVLCGKSSAENETAKTLKNSGALKLTDNTELSILLHSESAKPIKEDAFGVDS 97

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           ++N+LSTN F               +   +  +LP+G VCVADVQ+KGRG
Sbjct: 98  FMNSLSTNRFGRFLLWSPRLPSTHDVISQNFCELPIGAVCVADVQYKGRG 147

[Close]
BLAST of CmoCh15G007190 vs. TrEMBL
Match: A0A067GQ04_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0175182mg PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD++ +C L LSGK+ A+NE  + LK N TLKLPD++E+S+ L S   E +++  F ++ 
Sbjct: 42  MDSNSSCMLVLSGKSLAENEIAESLKSNSTLKLPDNSEVSIHLQS---EIVKQESFDVEL 101

Query: 61  YLNALSTNTF-----------------AISCNSNF-DLPLGTVCVADVQFKGRG 97
           ++N+L+TN F                 + S NSNF +LP+G VCVADVQFKGRG
Sbjct: 102 FMNSLATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELPVGAVCVADVQFKGRG 152

[Close]
BLAST of CmoCh15G007190 vs. TrEMBL
Match: B9GUF0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08830g PE=4 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 1 

Query: 3   TSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSE---RDEFLEEIGFRID 62
           +S  C L L GK++A+NE  K L  N+TLKLPD+ ++S  LHSE   + +  +E  F I+
Sbjct: 62  SSTPCKLVLCGKSSAENEIAKSLMNNNTLKLPDNVQVSTLLHSEIINKQQRQDEESFCIE 121

Query: 63  SYLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
            ++N+LSTN F               +  N+  +LP+GTVCVADVQ+KGRG
Sbjct: 122 RFMNSLSTNQFGRLLIWSPILPSTHDVVSNNFGELPIGTVCVADVQYKGRG 172

[Close]
BLAST of CmoCh15G007190 vs. TrEMBL
Match: A0A067GMC2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0175182mg PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-14
Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD++ +C L LSGK+ A+NE  + LK N TLKLPD++E+S+ L S   E +++  F ++ 
Sbjct: 42  MDSNSSCMLVLSGKSLAENEIAESLKSNSTLKLPDNSEVSIHLQS---EIVKQESFDVEL 101

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           ++N+L+TN F               +  ++  +LP+G VCVADVQFKGRG
Sbjct: 102 FMNSLATNRFGRLLIWSPRLPSTHDVVSHNFCELPVGAVCVADVQFKGRG 148

[Close]
BLAST of CmoCh15G007190 vs. TAIR10
Match: AT1G37150.2 (AT1G37150.2 holocarboxylase synthetase 2)

HSP 1 Score: 75.1 bits (183), Expect = 4.9e-14
Identity = 37/112 (33.04%), Postives = 67/112 (59.82%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFL--EEIGFRI 60
           MD   +C+L L GK++ + +T   LK N+ LKLPD++++S+FL SE    +  ++  F +
Sbjct: 1   MDIDASCSLVLYGKSSVETDTATRLKNNNVLKLPDNSKVSIFLQSEIKNLVRDDDSSFNL 60

Query: 61  DSYLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
             ++N++ST+ F               +  ++  ++P+G+VCV+D+Q KGRG
Sbjct: 61  SLFMNSISTHRFGRFLIWSPYLSSTHDVVSHNFSEIPVGSVCVSDIQLKGRG 112

[Close]
BLAST of CmoCh15G007190 vs. TAIR10
Match: AT2G25710.1 (AT2G25710.1 holocarboxylase synthase 1)

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13
Identity = 37/112 (33.04%), Postives = 66/112 (58.93%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFL--EEIGFRI 60
           M++  +C+L L GK++ + E  K LK  ++LKLPD+T++S+ L SE    +  ++  F +
Sbjct: 39  MESDASCSLVLCGKSSVETEVAKGLKNKNSLKLPDNTKVSLILESEAKNLVKDDDNSFNL 98

Query: 61  DSYLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
             ++N++ T+ F               +  ++  +LP+G+VCV D+QFKGRG
Sbjct: 99  SLFMNSIITHRFGRFLIWSPRLSSTHDVVSHNFSELPVGSVCVTDIQFKGRG 150

[Close]
BLAST of CmoCh15G007190 vs. NCBI nr
Match: gi|659093443|ref|XP_008447539.1| (PREDICTED: biotin--protein ligase 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-29
Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD SPTC+L LSGKTAA+NET KLLKRNDTLKLPD TEISV LHSE+D+ LEE GFRID 
Sbjct: 61  MDASPTCSLVLSGKTAAENETAKLLKRNDTLKLPDDTEISVLLHSEKDKPLEENGFRIDL 120

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           YLNALST+TF               +  ++  +LPLG VCVADVQFKGRG
Sbjct: 121 YLNALSTDTFGRFLIWSPRVPSTQDVISHNFSNLPLGAVCVADVQFKGRG 170

[Close]
BLAST of CmoCh15G007190 vs. NCBI nr
Match: gi|659093445|ref|XP_008447540.1| (PREDICTED: biotin--protein ligase 2-like isoform X3 [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-29
Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD SPTC+L LSGKTAA+NET KLLKRNDTLKLPD TEISV LHSE+D+ LEE GFRID 
Sbjct: 61  MDASPTCSLVLSGKTAAENETAKLLKRNDTLKLPDDTEISVLLHSEKDKPLEENGFRIDL 120

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           YLNALST+TF               +  ++  +LPLG VCVADVQFKGRG
Sbjct: 121 YLNALSTDTFGRFLIWSPRVPSTQDVISHNFSNLPLGAVCVADVQFKGRG 170

[Close]
BLAST of CmoCh15G007190 vs. NCBI nr
Match: gi|659093441|ref|XP_008447538.1| (PREDICTED: biotin--protein ligase 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 5.0e-29
Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD SPTC+L LSGKTAA+NET KLLKRNDTLKLPD TEISV LHSE+D+ LEE GFRID 
Sbjct: 61  MDASPTCSLVLSGKTAAENETAKLLKRNDTLKLPDDTEISVLLHSEKDKPLEENGFRIDL 120

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           YLNALST+TF               +  ++  +LPLG VCVADVQFKGRG
Sbjct: 121 YLNALSTDTFGRFLIWSPRVPSTQDVISHNFSNLPLGAVCVADVQFKGRG 170

[Close]
BLAST of CmoCh15G007190 vs. NCBI nr
Match: gi|778681319|ref|XP_004150602.2| (PREDICTED: biotin--protein ligase 2-like [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28
Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD SPTC+L LSGKTA +NET KLLKRNDTLKLPD TEISV LHSE+D+ LEE GFRID 
Sbjct: 61  MDASPTCSLVLSGKTAVENETAKLLKRNDTLKLPDDTEISVLLHSEKDKPLEENGFRIDL 120

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           YLNALST+TF               +  ++  +LPLG VCVADVQFKGRG
Sbjct: 121 YLNALSTDTFGRFLIWSPRVPSTQDVISHNFSNLPLGAVCVADVQFKGRG 170

[Close]
BLAST of CmoCh15G007190 vs. NCBI nr
Match: gi|700202909|gb|KGN58042.1| (hypothetical protein Csa_3G455650 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28
Identity = 72/110 (65.45%), Postives = 81/110 (73.64%), Query Frame = 1 

Query: 1   MDTSPTCALFLSGKTAADNETVKLLKRNDTLKLPDHTEISVFLHSERDEFLEEIGFRIDS 60
           MD SPTC+L LSGKTA +NET KLLKRNDTLKLPD TEISV LHSE+D+ LEE GFRID 
Sbjct: 61  MDASPTCSLVLSGKTAVENETAKLLKRNDTLKLPDDTEISVLLHSEKDKPLEENGFRIDL 120

Query: 61  YLNALSTNTFA--------------ISCNSNFDLPLGTVCVADVQFKGRG 97
           YLNALST+TF               +  ++  +LPLG VCVADVQFKGRG
Sbjct: 121 YLNALSTDTFGRFLIWSPRVPSTQDVISHNFSNLPLGAVCVADVQFKGRG 170

The following BLAST results are available for this feature:
BLAST of CmoCh15G007190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HCS2_ARATH8.6e-1333.04Biotin--protein ligase 2 OS=Arabidopsis thaliana GN=HCS2 PE=2 SV=1[more]
HCS1_ARATH4.3e-1233.04Biotin--protein ligase 1, chloroplastic OS=Arabidopsis thaliana GN=HCS1 PE=1 SV=... [more]
BLAST of CmoCh15G007190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBN1_CUCSA1.0e-2865.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G455650 PE=4 SV=1[more]
M5XAL0_PRUPE2.4e-1745.45Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007504mg PE=4 SV=1[more]
A0A067GQ04_CITSI1.3e-1544.74Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0175182mg PE=4 ... [more]
B9GUF0_POPTR1.4e-1443.24Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08830g PE=4 SV=2[more]
A0A067GMC2_CITSI1.9e-1441.82Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0175182mg PE=4 SV=1[more]
BLAST of CmoCh15G007190 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G37150.24.9e-1433.04 holocarboxylase synthetase 2[more]
AT2G25710.12.4e-1333.04 holocarboxylase synthase 1[more]
BLAST of CmoCh15G007190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093443|ref|XP_008447539.1|5.0e-2966.36PREDICTED: biotin--protein ligase 2-like isoform X2 [Cucumis melo][more]
gi|659093445|ref|XP_008447540.1|5.0e-2966.36PREDICTED: biotin--protein ligase 2-like isoform X3 [Cucumis melo][more]
gi|659093441|ref|XP_008447538.1|5.0e-2966.36PREDICTED: biotin--protein ligase 2-like isoform X1 [Cucumis melo][more]
gi|778681319|ref|XP_004150602.2|1.5e-2865.45PREDICTED: biotin--protein ligase 2-like [Cucumis sativus][more]
gi|700202909|gb|KGN58042.1|1.5e-2865.45hypothetical protein Csa_3G455650 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0006464 cellular protein modification process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G007190.1CmoCh15G007190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.930.10coord: 52..98
score: 8.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G007190CmaCh04G023380Cucurbita maxima (Rimu)cmacmoB693
CmoCh15G007190Cp4.1LG13g04920Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G007190Cp4.1LG01g20300Cucurbita pepo (Zucchini)cmocpeB280
CmoCh15G007190Carg18224Silver-seed gourdcarcmoB0714
CmoCh15G007190Carg01504Silver-seed gourdcarcmoB1118
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G007190CmoCh04G024460Cucurbita moschata (Rifu)cmocmoB262
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G007190Watermelon (97103) v2cmowmbB280
CmoCh15G007190Watermelon (97103) v2cmowmbB283
CmoCh15G007190Wax gourdcmowgoB0367
CmoCh15G007190Wax gourdcmowgoB0404
CmoCh15G007190Cucurbita moschata (Rifu)cmocmoB008
CmoCh15G007190Cucurbita moschata (Rifu)cmocmoB245
CmoCh15G007190Cucumber (Gy14) v1cgycmoB0690
CmoCh15G007190Cucurbita maxima (Rimu)cmacmoB037
CmoCh15G007190Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G007190Cucurbita maxima (Rimu)cmacmoB465
CmoCh15G007190Wild cucumber (PI 183967)cmocpiB284
CmoCh15G007190Wild cucumber (PI 183967)cmocpiB289
CmoCh15G007190Cucumber (Chinese Long) v2cmocuB276
CmoCh15G007190Cucumber (Chinese Long) v2cmocuB280
CmoCh15G007190Melon (DHL92) v3.5.1cmomeB240
CmoCh15G007190Melon (DHL92) v3.5.1cmomeB273
CmoCh15G007190Watermelon (Charleston Gray)cmowcgB242
CmoCh15G007190Watermelon (Charleston Gray)cmowcgB250
CmoCh15G007190Watermelon (97103) v1cmowmB253
CmoCh15G007190Watermelon (97103) v1cmowmB254
CmoCh15G007190Watermelon (97103) v1cmowmB279
CmoCh15G007190Cucurbita pepo (Zucchini)cmocpeB289
CmoCh15G007190Cucurbita pepo (Zucchini)cmocpeB298
CmoCh15G007190Bottle gourd (USVL1VR-Ls)cmolsiB251
CmoCh15G007190Bottle gourd (USVL1VR-Ls)cmolsiB271
CmoCh15G007190Cucumber (Gy14) v2cgybcmoB459
CmoCh15G007190Cucumber (Gy14) v2cgybcmoB574
CmoCh15G007190Melon (DHL92) v3.6.1cmomedB273
CmoCh15G007190Melon (DHL92) v3.6.1cmomedB307
CmoCh15G007190Silver-seed gourdcarcmoB0915
CmoCh15G007190Cucumber (Chinese Long) v3cmocucB0333
CmoCh15G007190Cucumber (Chinese Long) v3cmocucB0337