CmoCh15G006810 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G006810
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTwo-component response regulator
LocationCmo_Chr15 : 3335966 .. 3337293 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCAAGGTCAATTCCACTACTACCCTTTCATACATACAACAAATTAATACTTATTTTTTTCCACCTCTAAATTTTAGATTATTGCAGATATTATCCCTTTCTATATATATCCCTTCAAGATTTTAAAACCCGTGATATCGTTGTTCTCTTTGAATTTTTCCTTCCAATCTTCCACTCAAGAGTTTTAAAATACAATTTTTACACTCTTATAAAAATTGTGTTCTCCTCTCCAACCTATGTGAGATCTCAGAATTCATGCATTTAATGAAGCCCACCATCAATGAATGTTTGTTCCCACTTTAATTCTTTATTTTTCCCCACCTCTAAAACCCATTAGATTGATTTTTTTTATTATAAAAAACTTATTTTATTTTAAAATTTCTCTATGAAAAAATTATTGAAAAAATCACACAATTTGATAATAAAACTTAGAGCTAAAATATTAATGTTAGAAGATGATTGCTTACCTGATACGTGTATTTGCAGGGATCTTACTGGAAAGACATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTAAAAAAATTGATGCTCTCTCACTCGATTTCTTCTCTAAAATTCAAATTTTAGTTTAATTCACAGAGTAATCGTGAAATGAATGTATGAACTTACAAAACAAATGCAATTTAACTTACAGGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCCGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAACAAGAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGACGGAAACAACTCAGATAGTAACAAGAACGACAATGGCGATCTGAAAGGCGACCGAAGCTGAAAGAATTGCAAGGTGGAGCATAAGAAATGGTGCGATATTGGCAGGTAGCATTTCGTCGAACACCTTTCCTGCAATATAAAATGGCTTGTATACCGATCGTGTTTGATGATCAGTGCCTCCCAAAATGGGATGTGTTCGAGCGTAAATCAATCTAGGGTTTACAACTCGGATTAAAATTATCAAATGAAATTTCCATTTTGTCTCTAGGGTTCAGTAATCAAGCGCTGAAAATGGCGGAAAACCAAGAGTTTCCAGGTTTTTTTTGGAACTAAGAGCGCGAGAGGATTAAAAAGAATCCACAAAATCAAATTCCTAACACAAAAATTTGAAAACAATTATTGGAATGAAAAAT

mRNA sequence

ATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCAAGGGATCTTACTGGAAAGACATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCCGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAACAAGAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGACGGAAACAACTCAGATAGTAACAAGAACGACAATGGCGATCTGAAAGGCGACCGAAGCTGAAAGAATTGCAAGGTGGAGCATAAGAAATGGTGCGATATTGGCAGGTAGCATTTCGTCGAACACCTTTCCTGCAATATAAAATGGCTTGTATACCGATCGTGTTTGATGATCAGTGCCTCCCAAAATGGGATGTGTTCGAGCGTAAATCAATCTAGGGTTTACAACTCGGATTAAAATTATCAAATGAAATTTCCATTTTGTCTCTAGGGTTCAGTAATCAAGCGCTGAAAATGGCGGAAAACCAAGAGTTTCCAGGTTTTTTTTGGAACTAAGAGCGCGAGAGGATTAAAAAGAATCCACAAAATCAAATTCCTAACACAAAAATTTGAAAACAATTATTGGAATGAAAAAT

Coding sequence (CDS)

ATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCAAGGGATCTTACTGGAAAGACATTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCCGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAACAAGAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGACGGAAACAACTCAGATAGTAACAAGAACGACAATGGCGATCTGAAAGGCGACCGAAGCTGA
Homology
[Close]
BLAST of CmoCh15G006810 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 6.9e-25
Identity = 53/84 (63.10%), Postives = 70/84 (83.33%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  SY +DIPVV+MSS+N PSRIN CLEEGA+EF LKP++LS
Sbjct: 73  ITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLS 132

Query: 61  DVKKLEPHLQKSLTRCSAEIKEQE 84
           D+ KL+PH+ KS  RC    ++++
Sbjct: 133 DMSKLKPHILKS--RCKEHYQQEQ 154

[Close]
BLAST of CmoCh15G006810 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.9e-25
Identity = 53/84 (63.10%), Postives = 70/84 (83.33%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  SY +DIPVV+MSS+N PSRIN CLEEGA+EF LKP++LS
Sbjct: 73  ITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPVRLS 132

Query: 61  DVKKLEPHLQKSLTRCSAEIKEQE 84
           D+ KL+PH+ KS  RC    ++++
Sbjct: 133 DMSKLKPHILKS--RCKEHYQQEQ 154

[Close]
BLAST of CmoCh15G006810 vs. Swiss-Prot
Match: ARR9_ARATH (Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-24
Identity = 56/108 (51.85%), Postives = 82/108 (75.93%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  S ++DIPVV+MSSEN P+RI+ CLEEGAEEF LKP++L+
Sbjct: 78  ITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLA 137

Query: 61  DVKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGN 108
           D+ KL+PH+ K+  + + +++E ET    +E G+   + D ++ D  N
Sbjct: 138 DLNKLKPHMMKTKLK-NQKLEEIETTS-KVENGVPTAVADPEIKDSTN 183

[Close]
BLAST of CmoCh15G006810 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-23
Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSY-WKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLKR+KGS   KDIPVV+MSSEN P+RIN CLE+GAEEF LKP++L+
Sbjct: 78  ITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKPVKLA 137

Query: 61  DVKKLEPHLQK 71
           D+KKL+ HL K
Sbjct: 138 DMKKLKSHLLK 148

[Close]
BLAST of CmoCh15G006810 vs. Swiss-Prot
Match: ORR4_ORYSI (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-23
Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSY-WKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLKR+KGS   KDIPVV+MSSEN P+RIN CLE+GAEEF LKP++L+
Sbjct: 78  ITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFFLKPVKLA 137

Query: 61  DVKKLEPHLQK 71
           D+KKL+ HL K
Sbjct: 138 DMKKLKSHLLK 148

[Close]
BLAST of CmoCh15G006810 vs. TrEMBL
Match: A0A0A0KIW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G383530 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 90/121 (74.38%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTD+CMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 91  MTDFCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 150

Query: 61  VKKLEPHLQKSLTRCSA--EIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSNKNDNGD 120
           VKKLEPHLQKSLTRC++  +IKEQ+T   GI IGI I   ++  +++  NS +N N+N  
Sbjct: 151 VKKLEPHLQKSLTRCASDQQIKEQQTT-LGIGIGIEIDDENNSKLEESKNSINNNNNNNS 210

[Close]
BLAST of CmoCh15G006810 vs. TrEMBL
Match: E3Q1G3_POPCA (Putative A-type response regulator 3 OS=Populus canadensis GN=dkRR3 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKR+KGSYWKD+PVVVMSSEN PSRI MCLEEGAEEFLLKPLQLSD
Sbjct: 116 MTDYCMPGMSGYDLLKRVKGSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSD 175

Query: 61  VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSN 113
           V+KL+ HL KSL + S++  +  +             TDS  +   N S+SN
Sbjct: 176 VEKLQTHLLKSLDKYSSKRIDDNSFN-----------TDSSNITVSNKSNSN 216

[Close]
BLAST of CmoCh15G006810 vs. TrEMBL
Match: B9GU27_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08270g PE=4 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKR+KGSYWKD+PVVVMSSEN PSRI MCLEEGAEEFLLKPLQLSD
Sbjct: 117 MTDYCMPGMSGYDLLKRVKGSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSD 176

Query: 61  VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSN 113
           V+KL+ HL KSL + S++  +  +             TDS  +   N S+SN
Sbjct: 177 VEKLQTHLLKSLDKYSSKRIDDNSFN-----------TDSSNITVSNKSNSN 217

[Close]
BLAST of CmoCh15G006810 vs. TrEMBL
Match: B7FMM2_MEDTR (Two-component response regulator ARR3-like protein OS=Medicago truncatula GN=MTR_3g088630 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-29
Identity = 76/118 (64.41%), Postives = 86/118 (72.88%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKR+KGS WKD+PVVVMSSEN PSRI+MCLEEGAEEFL+KPLQLSD
Sbjct: 99  MTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEEFLMKPLQLSD 158

Query: 61  VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSNKNDNGD 119
           ++KL+P+  KSL   S    EQE+             TDSD  DD +  DSN N N D
Sbjct: 159 LQKLQPYFLKSLENSS---DEQESANSSTT------TTDSD--DDNDLIDSNNNSNDD 205

[Close]
BLAST of CmoCh15G006810 vs. TrEMBL
Match: I3SUQ9_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.3e-29
Identity = 75/118 (63.56%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKR+KGS WKD+PVVVMSSEN PSRI+MCLEEGAEEFL+KPLQLSD
Sbjct: 99  MTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEGAEEFLMKPLQLSD 158

Query: 61  VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSNKNDNGD 119
           ++KL+P+  KSL        EQE+             TDSD  DD +  DSN N N D
Sbjct: 159 LQKLQPYFLKSLEN---SFDEQESANSSTT------TTDSD--DDNDLIDSNNNSNDD 205

[Close]
BLAST of CmoCh15G006810 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 113.6 bits (283), Expect = 8.6e-26
Identity = 56/108 (51.85%), Postives = 82/108 (75.93%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K  S ++DIPVV+MSSEN P+RI+ CLEEGAEEF LKP++L+
Sbjct: 78  ITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLA 137

Query: 61  DVKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGN 108
           D+ KL+PH+ K+  + + +++E ET    +E G+   + D ++ D  N
Sbjct: 138 DLNKLKPHMMKTKLK-NQKLEEIETTS-KVENGVPTAVADPEIKDSTN 183

[Close]
BLAST of CmoCh15G006810 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 105.5 bits (262), Expect = 2.4e-23
Identity = 48/79 (60.76%), Postives = 66/79 (83.54%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSY-WKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GYDLLK++K S  ++ IPVV+MSSEN P+RI+ CLEEGAEEF LKP++L+
Sbjct: 76  ITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLA 135

Query: 61  DVKKLEPHLQKSLTRCSAE 79
           D+ KL+PH+ K+  +  +E
Sbjct: 136 DLTKLKPHMMKTKLKKESE 154

[Close]
BLAST of CmoCh15G006810 vs. TAIR10
Match: AT1G10470.1 (AT1G10470.1 response regulator 4)

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-21
Identity = 44/73 (60.27%), Postives = 63/73 (86.30%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GY+LLK++K  S ++++PVV+MSSEN  +RI+ CLEEGA++FLLKP++L+
Sbjct: 93  ITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLA 152

Query: 61  DVKKLEPHLQKSL 73
           DVK+L  HL K +
Sbjct: 153 DVKRLRSHLTKDV 165

[Close]
BLAST of CmoCh15G006810 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 97.1 bits (240), Expect = 8.4e-21
Identity = 44/73 (60.27%), Postives = 63/73 (86.30%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSY-WKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           +TDYCMPGM+GY+LLK++K S  +K++PVV+MSSEN  +RI+ CLEEGAE+FLLKP++L+
Sbjct: 92  ITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLA 151

Query: 61  DVKKLEPHLQKSL 73
           DVK+L  +L + +
Sbjct: 152 DVKRLRSYLTRDV 164

[Close]
BLAST of CmoCh15G006810 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5)

HSP 1 Score: 95.1 bits (235), Expect = 3.2e-20
Identity = 47/80 (58.75%), Postives = 62/80 (77.50%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLK-GSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLS 60
           MTDY MPGM+GY+LLK++K  S +++IPVV+MSSEN   RI+ CLEEGAE+FLLKP++L+
Sbjct: 85  MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144

Query: 61  DVKKLEPHLQKSLTRCSAEI 80
           DVK+L   L K+  R    I
Sbjct: 145 DVKRLRDSLMKAEERAFKNI 164

[Close]
BLAST of CmoCh15G006810 vs. NCBI nr
Match: gi|449464160|ref|XP_004149797.1| (PREDICTED: two-component response regulator ARR17 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.5e-40
Identity = 90/121 (74.38%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTD+CMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 91  MTDFCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 150

Query: 61  VKKLEPHLQKSLTRCSA--EIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSNKNDNGD 120
           VKKLEPHLQKSLTRC++  +IKEQ+T   GI IGI I   ++  +++  NS +N N+N  
Sbjct: 151 VKKLEPHLQKSLTRCASDQQIKEQQTT-LGIGIGIEIDDENNSKLEESKNSINNNNNNNS 210

[Close]
BLAST of CmoCh15G006810 vs. NCBI nr
Match: gi|659133431|ref|XP_008466725.1| (PREDICTED: two-component response regulator ARR17-like isoform X2 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-39
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTD+CMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD
Sbjct: 90  MTDFCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 149

Query: 61  VKKLEPHLQKSLTRCSA--EIKEQETVGFGIEIGIGIGITDSDVVDDG----NNSDSNKN 119
           VKKLEPHLQKS+TRC++  +IKEQ+T   GI IGI I   ++  +++     NNS S+ N
Sbjct: 150 VKKLEPHLQKSITRCASDQQIKEQQTT-LGIGIGIAIDDEENSKLEESKNSVNNSSSSSN 209

[Close]
BLAST of CmoCh15G006810 vs. NCBI nr
Match: gi|659133429|ref|XP_008466724.1| (PREDICTED: two-component response regulator ARR17-like isoform X1 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-37
Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINM-CLEEGAEEFLLKPLQLS 60
           MTD+CMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRIN+ CLEEGAEEFLLKPLQLS
Sbjct: 90  MTDFCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINIRCLEEGAEEFLLKPLQLS 149

Query: 61  DVKKLEPHLQKSLTRCSA--EIKEQETVGFGIEIGIGIGITDSDVVDDG----NNSDSNK 119
           DVKKLEPHLQKS+TRC++  +IKEQ+T   GI IGI I   ++  +++     NNS S+ 
Sbjct: 150 DVKKLEPHLQKSITRCASDQQIKEQQTT-LGIGIGIAIDDEENSKLEESKNSVNNSSSSS 209

[Close]
BLAST of CmoCh15G006810 vs. NCBI nr
Match: gi|743845541|ref|XP_011027510.1| (PREDICTED: two-component response regulator ARR17-like [Populus euphratica])

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-29
Identity = 73/112 (65.18%), Postives = 83/112 (74.11%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKRLKGSYWKD+PVVVMSSEN PSRI MCLEEGAEEFLLKPLQLSD
Sbjct: 117 MTDYCMPGMSGYDLLKRLKGSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSD 176

Query: 61  VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSN 113
           V+KL+ HL KSL + S++  +  +             TDS  +   N S+SN
Sbjct: 177 VEKLQTHLLKSLHKYSSKRIDDNSFN-----------TDSSNITVSNKSNSN 217

[Close]
BLAST of CmoCh15G006810 vs. NCBI nr
Match: gi|309951230|emb|CBX43985.1| (putative A-type response regulator 3 [Populus x canadensis])

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-29
Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 1 

Query: 1   MTDYCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSD 60
           MTDYCMPGMSGYDLLKR+KGSYWKD+PVVVMSSEN PSRI MCLEEGAEEFLLKPLQLSD
Sbjct: 116 MTDYCMPGMSGYDLLKRVKGSYWKDVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSD 175

Query: 61  VKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDSN 113
           V+KL+ HL KSL + S++  +  +             TDS  +   N S+SN
Sbjct: 176 VEKLQTHLLKSLDKYSSKRIDDNSFN-----------TDSSNITVSNKSNSN 216

The following BLAST results are available for this feature:
BLAST of CmoCh15G006810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ORR10_ORYSJ6.9e-2563.10Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P... [more]
ORR10_ORYSI6.9e-2563.10Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=... [more]
ARR9_ARATH1.5e-2451.85Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1[more]
ORR4_ORYSJ1.7e-2373.24Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=... [more]
ORR4_ORYSI1.7e-2373.24Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 ... [more]
BLAST of CmoCh15G006810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIW1_CUCSA1.1e-4074.38Uncharacterized protein OS=Cucumis sativus GN=Csa_6G383530 PE=4 SV=1[more]
E3Q1G3_POPCA1.4e-2964.29Putative A-type response regulator 3 OS=Populus canadensis GN=dkRR3 PE=2 SV=1[more]
B9GU27_POPTR1.4e-2964.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s08270g PE=4 SV=2[more]
B7FMM2_MEDTR4.2e-2964.41Two-component response regulator ARR3-like protein OS=Medicago truncatula GN=MTR... [more]
I3SUQ9_MEDTR9.3e-2963.56Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
BLAST of CmoCh15G006810 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57040.18.6e-2651.85 response regulator 9[more]
AT2G41310.12.4e-2360.76 response regulator 3[more]
AT1G10470.12.9e-2160.27 response regulator 4[more]
AT1G59940.18.4e-2160.27 response regulator 3[more]
AT3G48100.13.2e-2058.75 response regulator 5[more]
BLAST of CmoCh15G006810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464160|ref|XP_004149797.1|1.5e-4074.38PREDICTED: two-component response regulator ARR17 [Cucumis sativus][more]
gi|659133431|ref|XP_008466725.1|2.2e-3972.58PREDICTED: two-component response regulator ARR17-like isoform X2 [Cucumis melo][more]
gi|659133429|ref|XP_008466724.1|1.6e-3771.20PREDICTED: two-component response regulator ARR17-like isoform X1 [Cucumis melo][more]
gi|743845541|ref|XP_011027510.1|1.2e-2965.18PREDICTED: two-component response regulator ARR17-like [Populus euphratica][more]
gi|309951230|emb|CBX43985.1|2.1e-2964.29putative A-type response regulator 3 [Populus x canadensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001789Sig_transdc_resp-reg_receiver
IPR011006CheY-like_superfamily
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G006810.1CmoCh15G006810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 2..62
score: 1.5
IPR001789Signal transduction response regulator, receiver domainPROFILEPS50110RESPONSE_REGULATORYcoord: 1..69
score: 21
IPR011006CheY-like superfamilyunknownSSF52172CheY-likecoord: 2..63
score: 4.55
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 2..70
score: 1.0
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 102..111
score: 2.2E-48coord: 1..83
score: 2.2
NoneNo IPR availablePANTHERPTHR26402:SF498SUBFAMILY NOT NAMEDcoord: 102..111
score: 2.2E-48coord: 1..83
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G006810Cucsa.188180Cucumber (Gy14) v1cgycmoB0547
CmoCh15G006810CmaCh15G006710Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G006810CmaCh04G023680Cucurbita maxima (Rimu)cmacmoB693
CmoCh15G006810Cla013929Watermelon (97103) v1cmowmB250
CmoCh15G006810Csa6G383530Cucumber (Chinese Long) v2cmocuB298
CmoCh15G006810MELO3C010624Melon (DHL92) v3.5.1cmomeB259
CmoCh15G006810ClCG08G005790Watermelon (Charleston Gray)cmowcgB265
CmoCh15G006810CSPI06G20300Wild cucumber (PI 183967)cmocpiB307
CmoCh15G006810Lsi08G004410Bottle gourd (USVL1VR-Ls)cmolsiB282
CmoCh15G006810Cp4.1LG13g04630Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G006810Cp4.1LG01g20550Cucurbita pepo (Zucchini)cmocpeB280
CmoCh15G006810MELO3C010624.2Melon (DHL92) v3.6.1cmomedB293
CmoCh15G006810CsaV3_6G034340Cucumber (Chinese Long) v3cmocucB0360
CmoCh15G006810Cla97C08G148550Watermelon (97103) v2cmowmbB302
CmoCh15G006810Bhi04G001509Wax gourdcmowgoB0386
CmoCh15G006810CsGy6G019760Cucumber (Gy14) v2cgybcmoB723
CmoCh15G006810Carg01537Silver-seed gourdcarcmoB1118
CmoCh15G006810Carg24432Silver-seed gourdcarcmoB0603
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G006810CmoCh04G024810Cucurbita moschata (Rifu)cmocmoB262
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G006810Cucumber (Chinese Long) v3cmocucB0333
CmoCh15G006810Watermelon (97103) v2cmowmbB280
CmoCh15G006810Wax gourdcmowgoB0404
CmoCh15G006810Cucurbita moschata (Rifu)cmocmoB008
CmoCh15G006810Cucurbita moschata (Rifu)cmocmoB245
CmoCh15G006810Cucurbita maxima (Rimu)cmacmoB037
CmoCh15G006810Wild cucumber (PI 183967)cmocpiB284
CmoCh15G006810Cucumber (Chinese Long) v2cmocuB276
CmoCh15G006810Melon (DHL92) v3.5.1cmomeB273
CmoCh15G006810Watermelon (Charleston Gray)cmowcgB242
CmoCh15G006810Watermelon (97103) v1cmowmB279
CmoCh15G006810Cucurbita pepo (Zucchini)cmocpeB298
CmoCh15G006810Bottle gourd (USVL1VR-Ls)cmolsiB271
CmoCh15G006810Cucumber (Gy14) v2cgybcmoB459
CmoCh15G006810Melon (DHL92) v3.6.1cmomedB307
CmoCh15G006810Silver-seed gourdcarcmoB0915