CmoCh15G005790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAGATTCAGAGAGATGAAGAAGGTGGACGTGCCCATGTGGGGTTTGCTTCTTGTTTTTATCTTGATGGTAGTGAAAATCGAGCCCATTGCATCTTTGCCATCTACTATTCCTGCATTCCTCTGGTCCCCTCAGCATCGCCATGGGTATGCTGCTTGATTTTTCGTGTTTCTTTTATGCGACATGTGACATTTTTTGTGTATCAACTCGTTCCACTGAATTATACATAGATTAAGTTTATACAATTGAGATCCTCGACATCCCTATGTCGGATCATCCTTGTTCGTTGTGGCATCCATTTGGCCTCTCCTAAAATTACTCAATGGAATATATTTGGCGCATCAAAGGTAGAAAATTTTCTTCTCGAGTGGTACGGGGAGTTCGCATAAGAGCTCAATAGCTTGTAAAATTAACGTTCACATAATACTATGGGCTGTTTGGTGGTGCATGCATAGTATAAACAGTACATAGATGAAGCTATCTACGTATAGTTAGCGAATTTTTTTTGCCTTTCTCCCTGCTTAGCTGATTGTATGGTTTATTGTTGTTATTTTAAATTTTAGATTCTCCATTATTCGTCTTCTTTTCTGTCTATTTGGTTAGTTTCCCCATTATCATCATTTATTTGGTTTTATACGAGTGAATTCTCTTTGGAGGGACTTGTAACAGCCCAAGCCCACCGCTAGCAAATATTGTCCCCTTTGGGCTTTCCCTCAAGGTTTTAAAACGCGTATGCAAGGGAGAGGTTTTCACACACTTATAAGGAATATTTTGTTCTCCTCCCCAACCGATGTGGGTCTCACAGGACTACTTGTTATATATCATATACTATCATTATTCTATGTTTGATTTAAAAATTGTACTGTATGGCCGCAGGTTGTCTAACAACATCCTAGAAAAATATGTCGATTATCAGACCATTTCCCCACAGGAGATGGCAAAGTCTGTTCTCTATGAAGGCGGCTGGTCAAAAATTCTGGTGTGTTTGTTAACATTTCGAATCTTGTTTTAGAGTTCTCTGTCATTTTTAAGAATTTTTATTTTTTAAAAGGCTTCCTGTTTTGCTTTTTGGTATATCCTTTTCTTTAGTTTGGCTTTCTTTCCTTTTGGGCTTGGTTTTCTGGACACCCTTTTTATCTCATTCTTTTTTTTTTTTTCTCAATGTAAGTTTGGTTCTTCACAAAAAAAAATATTCTCGATTTCTTTTCTCGTATTGATATATTATTAATTGTTTAATTGTTTAGTGCACGAAAAAGGAAGTAGAGCAGCCTGTGGATCTTGCAATAATCTTTGTTGGTTCAGAGGTAGGAATATATGGAGTTTGGGATCTATCACTCACTCTTCATCATGTAACTCTTTCAGTTATTGTGAATTTGTTCTGCTCTCTCACATGGTTTATTTCATTCTTCATTGTATTTTTTTTCTTATAGCCAAAAATCTGACCTCTGGTTTATCAAGTTTGAATTTGGGCTATTGTTTGAGCTTAAAAATAGACAACTTCGAAATATGGATATAGGAGAACCTGAAAGGTGATCAAAGGTTTATCGGATAACGTGATCAAAGCATGTTTTCAGGGAATTTGGTCCAAAATGAATCTAAGATTATTATAAGATAAGTAATGTCTAGCTAAGGTGGTTAGGATGGAGTTAATTAGATACTAAGACAATTCTTGATATGGCAAAAGCTTGGGATTATTTTATTTGTTTTTTATAATTATCAATATTATTATCGAAAAAAGTATGTAAAACTCAAAAAGAATAACTATGAACTTTTTGAGTCTCATCCACGTTCGACATGCTTTCCTTTTTAATCTTTATATATTTGCTCGTAGTCAGATTATGATGTTAGCTCAAAGCTTTATTTTATGTCATGTGTCGCAAATAGTTTTTCTACTTTCAAGGATAAGAATTTGATGCACTGTTATGTTGGTTTCTTGATCAAAGTCTTTTGCCTTTTATAGTTGCAGTCAGATTTCATGAACAGGCGCATGGATCCAAATCTTATGGACTTACTTAAGGTTTGCAAAAACAATTTGTTTTATAAATTCTAAAACTGCATATGAGTCTCAACTCTATATCTTGGATCAATTTTCACAGGTTTCTTTCTCAAGGTCCAACTTCTCCATGGCATTTCCCTATGTGGCTGCACCAGAAATGGGTACAGTTGAAAATATATTGATCTCGGAGTTCAAAAAATCATGTGGGCATGACCTCAGAATCAGCAATAGCGCTTTTGGGGAGTCGAATTCTGTTGAGGATGAATCATTTCAGAGACTTCCAGTGCTGCAATCGGTTAACGTAAACCCGTCTTTATATGACCAAAGTCTGTTTTCTTAGAACATTTATGATATCGTTCTTGATTCTTTCTGCGTTGAACGAGTAGGATTATTTGGTTTCAAGAATGGAAAAGAAGCCAAAGGGAGAGACGGATTTGGTAGTTTTCGCTCATGGAGGTCTCGGTTCTCCCAAAGAAGTCGATCCATCAACTTCTGAAAGTATGTTGGCTCATTGATGATTTATGTTGTGGCTGTAGTGGTATAAATTCTTATGTGTGAATTTTGAAATTATTATAGGCAAAACTTTGTTGGAGATAATGACTTCTGCGGATCATGTTGGGGCAAAGTATGAAATTCTCTATATTTCAGATCCTTTTAGGTCCATTCGCCATTCTTATGTCGAGCTGGAAAGATTTATGGCTGAAGGTTCCTCTGGAAACGGATCGGCTAAATCAGCAAATTCTTGCGATGAACTCTGCCAAATTAAATCATCTCTTCTCGAGGGCCTCTTCGTCGTGAGTCGCTAACTGTTTTTATATGATTTCTTAGCTTTACGATTCATATATTTTGGCTATTGGTTAATCATCAGGACCTGGTAGTATTTTAGTTATATTTTAGCCAGTTCTAGAACTACTTGAAACACTGGACTGAAATATTGGAGTTAGTAAAAAGTTGTGAGATATTACATTGGTTGGAGAGAGGAACGAAACATTCTTTATAAGGATGTGGAAACCTCGCAGATGCGTTTTAAAACCTTGAGAGAAAGTCCGGAAGGGTAAGCCCAAAGAGGACAATATCTGCTAGTGGTGAGCTTGAGCTGTTACAAATGGTATCAGAGCTAGACACCAGGTGATATGCCAACGAGGACGTTGGGCTCCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTAAAAACTTCTTCTTAGCAGACGCATTTTAATACTTATTTTAAAACCTCAAGGGTAGCCTAGAAGGAAAAACCTAAAGAAGACAATATCTGCTAGCAGTGAGCTTGGGCTGTTACAAAGTTACTCTCGGAAACGTGGTTAGTTGTTGAGACCACGGTTGAGACCACGAGTCTTGATTGTTAAAATGTGTCATTTTGGCTTACATTTGCTTCCATTCTCCAACCATGCAGGGGCTAGTTTTGCTTATAATCCTATTATCAGGCCTTTGCTGTATGATGGGTATTGACACCCCAACGAGATTTGAGACGCCACAAGATTCTTAAAAGCACGAATTGTTCTGGGAATGTATATCATTGAAGGGAAGAAGCTAAAGTTAATGGTACCATTAATTTTGTCATACTAGATATTAAGCTATTCTTTCTTAAACTTGTCTCTTGTGGCATGGTTTTTTGCCATGCTCTCTAGCTGCTGCTACTGGTGTTAATGTTTTGAATATTTCAAGCATTTTGGTTTGTCCTCGACGCTTTTATGCGATATCATTCTAAGCAAGGCGAGAATAATAAAGATGTGCTATTCCATCAAGTTTTTC ATGTGGAGATTCAGAGAGATGAAGAAGGTGGACGTGCCCATGTGGGGTTTGCTTCTTGTTTTTATCTTGATGGTAGTGAAAATCGAGCCCATTGCATCTTTGCCATCTACTATTCCTGCATTCCTCTGGTCCCCTCAGCATCGCCATGGGTTGTCTAACAACATCCTAGAAAAATATGTCGATTATCAGACCATTTCCCCACAGGAGATGGCAAAGTCTGTTCTCTATGAAGGCGGCTGGTCAAAAATTCTGTGCACGAAAAAGGAAGTAGAGCAGCCTGTGGATCTTGCAATAATCTTTGTTGGTTCAGAGTTGCAGTCAGATTTCATGAACAGGCGCATGGATCCAAATCTTATGGACTTACTTAAGGTTTCTTTCTCAAGGTCCAACTTCTCCATGGCATTTCCCTATGTGGCTGCACCAGAAATGGGTACAGTTGAAAATATATTGATCTCGGAGTTCAAAAAATCATGTGGGCATGACCTCAGAATCAGCAATAGCGCTTTTGGGGAGTCGAATTCTGTTGAGGATGAATCATTTCAGAGACTTCCAGTGCTGCAATCGGTTAACGATTATTTGGTTTCAAGAATGGAAAAGAAGCCAAAGGGAGAGACGGATTTGGTAGTTTTCGCTCATGGAGGTCTCGGTTCTCCCAAAGAAGTCGATCCATCAACTTCTGAAAGCAAAACTTTGTTGGAGATAATGACTTCTGCGGATCATGTTGGGGCAAAGTATGAAATTCTCTATATTTCAGATCCTTTTAGGTCCATTCGCCATTCTTATGTCGAGCTGGAAAGATTTATGGCTGAAGGTTCCTCTGGAAACGGATCGGCTAAATCAGCAAATTCTTGCGATGAACTCTGCCAAATTAAATCATCTCTTCTCGAGGGCCTCTTCGTCGGGCTAGTTTTGCTTATAATCCTATTATCAGGCCTTTGCTGTATGATGGGTATTGACACCCCAACGAGATTTGAGACGCCACAAGATTCTTAAAAGCACGAATTGTTCTGGGAATGTATATCATTGAAGGGAAGAAGCTAAAGTTAATGGTACCATTAATTTTGTCATACTAGATATTAAGCTATTCTTTCTTAAACTTGTCTCTTGTGGCATGGTTTTTTGCCATGCTCTCTAGCTGCTGCTACTGGTGTTAATGTTTTGAATATTTCAAGCATTTTGGTTTGTCCTCGACGCTTTTATGCGATATCATTCTAAGCAAGGCGAGAATAATAAAGATGTGCTATTCCATCAAGTTTTTC ATGTGGAGATTCAGAGAGATGAAGAAGGTGGACGTGCCCATGTGGGGTTTGCTTCTTGTTTTTATCTTGATGGTAGTGAAAATCGAGCCCATTGCATCTTTGCCATCTACTATTCCTGCATTCCTCTGGTCCCCTCAGCATCGCCATGGGTTGTCTAACAACATCCTAGAAAAATATGTCGATTATCAGACCATTTCCCCACAGGAGATGGCAAAGTCTGTTCTCTATGAAGGCGGCTGGTCAAAAATTCTGTGCACGAAAAAGGAAGTAGAGCAGCCTGTGGATCTTGCAATAATCTTTGTTGGTTCAGAGTTGCAGTCAGATTTCATGAACAGGCGCATGGATCCAAATCTTATGGACTTACTTAAGGTTTCTTTCTCAAGGTCCAACTTCTCCATGGCATTTCCCTATGTGGCTGCACCAGAAATGGGTACAGTTGAAAATATATTGATCTCGGAGTTCAAAAAATCATGTGGGCATGACCTCAGAATCAGCAATAGCGCTTTTGGGGAGTCGAATTCTGTTGAGGATGAATCATTTCAGAGACTTCCAGTGCTGCAATCGGTTAACGATTATTTGGTTTCAAGAATGGAAAAGAAGCCAAAGGGAGAGACGGATTTGGTAGTTTTCGCTCATGGAGGTCTCGGTTCTCCCAAAGAAGTCGATCCATCAACTTCTGAAAGCAAAACTTTGTTGGAGATAATGACTTCTGCGGATCATGTTGGGGCAAAGTATGAAATTCTCTATATTTCAGATCCTTTTAGGTCCATTCGCCATTCTTATGTCGAGCTGGAAAGATTTATGGCTGAAGGTTCCTCTGGAAACGGATCGGCTAAATCAGCAAATTCTTGCGATGAACTCTGCCAAATTAAATCATCTCTTCTCGAGGGCCTCTTCGTCGGGCTAGTTTTGCTTATAATCCTATTATCAGGCCTTTGCTGTATGATGGGTATTGACACCCCAACGAGATTTGAGACGCCACAAGATTCTTAA
BLAST of CmoCh15G005790 vs. TrEMBL
Match: A0A0A0KB93_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G053330 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 8.3e-141 Identity = 261/328 (79.57%), Postives = 288/328 (87.80%), Query Frame = 1
BLAST of CmoCh15G005790 vs. TrEMBL
Match: A0A067K344_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16206 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89 Identity = 171/317 (53.94%), Postives = 245/317 (77.29%), Query Frame = 1
BLAST of CmoCh15G005790 vs. TrEMBL
Match: A0A0D2MSB2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G019900 PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89 Identity = 173/301 (57.48%), Postives = 231/301 (76.74%), Query Frame = 1
BLAST of CmoCh15G005790 vs. TrEMBL
Match: M5WIY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008748mg PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89 Identity = 179/321 (55.76%), Postives = 234/321 (72.90%), Query Frame = 1
BLAST of CmoCh15G005790 vs. TrEMBL
Match: B9SBL7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0341930 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89 Identity = 178/311 (57.23%), Postives = 236/311 (75.88%), Query Frame = 1
BLAST of CmoCh15G005790 vs. TAIR10
Match: AT3G13410.1 (AT3G13410.1 unknown protein) HSP 1 Score: 292.4 bits (747), Expect = 3.6e-79 Identity = 154/326 (47.24%), Postives = 223/326 (68.40%), Query Frame = 1
BLAST of CmoCh15G005790 vs. TAIR10
Match: AT1G55546.1 (AT1G55546.1 unknown protein) HSP 1 Score: 81.6 bits (200), Expect = 9.7e-16 Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 1
BLAST of CmoCh15G005790 vs. NCBI nr
Match: gi|659113734|ref|XP_008456728.1| (PREDICTED: uncharacterized protein LOC103496586 isoform X1 [Cucumis melo]) HSP 1 Score: 514.6 bits (1324), Expect = 1.3e-142 Identity = 261/326 (80.06%), Postives = 290/326 (88.96%), Query Frame = 1
BLAST of CmoCh15G005790 vs. NCBI nr
Match: gi|700190905|gb|KGN46109.1| (hypothetical protein Csa_6G053330 [Cucumis sativus]) HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140 Identity = 261/328 (79.57%), Postives = 288/328 (87.80%), Query Frame = 1
BLAST of CmoCh15G005790 vs. NCBI nr
Match: gi|659113736|ref|XP_008456729.1| (PREDICTED: uncharacterized protein LOC103496586 isoform X2 [Cucumis melo]) HSP 1 Score: 506.1 bits (1302), Expect = 4.5e-140 Identity = 259/326 (79.45%), Postives = 288/326 (88.34%), Query Frame = 1
BLAST of CmoCh15G005790 vs. NCBI nr
Match: gi|449446383|ref|XP_004140951.1| (PREDICTED: uncharacterized protein LOC101220040 isoform X1 [Cucumis sativus]) HSP 1 Score: 503.4 bits (1295), Expect = 2.9e-139 Identity = 259/326 (79.45%), Postives = 286/326 (87.73%), Query Frame = 1
BLAST of CmoCh15G005790 vs. NCBI nr
Match: gi|778710695|ref|XP_011656616.1| (PREDICTED: uncharacterized protein LOC101220040 isoform X2 [Cucumis sativus]) HSP 1 Score: 495.0 bits (1273), Expect = 1.0e-136 Identity = 257/326 (78.83%), Postives = 284/326 (87.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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