CmoCh15G005780 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G005780
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description30S ribosomal protein S1 like A
LocationCmo_Chr15 : 2767205 .. 2771980 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTAATCCTTGCGGGACTTCAACCCTGTAAGTGTCTTTGCGCTCTCAATTCGTCATCTGAGCCTCAAGATTTCTCAGTTTCATCTAATTCCCTTAGGAATTCAGCATTTCTCACTCCACGAATCTCAAATTTCAAATTGTATTCCACTTCTAATTGGTCTAATAACTGTGATAAATCCAAGAAATTGTCATTGCGAAGGAGGAGTAGCGTTGTATTTTGCTCTAGGAATGAAATTTTTGATAATTTCTCGAGCACTCAGTTGCCGAATAAGCCTAGCGAGGATGAAATTCAAGGCATCGATGAGATTGGTTTGCTAAATAAACCTTCTCCTGCTCCTATAAACAATGGAGTTTCATCAGAATTTGACGAAGAAGTTGAAAATCCCGACGAGAATGAAGCCCTAGCGCCATTTATGAAGTTCTTTAAGAATACAGATGCTGTAGAAGAAGAGGAAGAAGAGGAAAAGGCGGTAAGAGCTTTTGAAGAGAAAATTGATGGAGATGAGGAGATTGTGAAAGCCAATAAGTTAAATGTTGAGTACTATGAGCCCAAACCTGGAGATGTCGTGGTCGGTGTGGTTGTCTCCGGTAATGAAAACAAGCTCGACATCAATGTCGGGGCGGATCTATTAGGAACAATGTTGACAAAAGAGGTGCTTCCATTGTATGACAAAGAGGTGGAATTCTTGATGTGTGATCTAGACAAGGATGCCGAGTCTTTTATGATGAATGGGAAGATGGGGCTGGTGAAATACGACGATGCTGTTAGCCGTGGACTGGGGCCGGGGCGCCCTGTCGTGGAGACTGGCACAGTTTTGTTTGCTGAGGTTTTGGGAAGGACACTTAGTGGTCGCCCATTGCTCTCGACTAGAAGGTTGTTTCGACGGTTAGCTTGGCATCGAGTGAGGCAGGTTCTTTTCTTGATTAGCTTCTTTGTTTATTGAAGTTTCTGTGTTAGGGGGCACAAAGAAGAAATGTATATATTCGTTGTGGTTCCCTTGTTCGACAGATTAAACGACTCGATGAGCCGATTGAAGTTAAAATATCAGAGTGGAATACTGGAGGCCTTCTTACAAGAATTGAGGTTGTTTATGCCATCTTAATTAATTTGGTTTTTAGTTTGTATGTTCTTATTGAATGGCTTATGTTTCGGTTCGGTTTTGATCTGTTGTTCTACAGGGTTTGCGAGCGTTTCTTCCGAAGGCTGAGTTATTGAATCGAGTAAATAACTTCACAGAATTGAAAGAAAATGTGAGTATGTTTCAGTTTCTTCTATGTTTTAGCTGCTATATGCAGCCTTTACTGGTTCATCATGTTCAATTCGTCAACTGAGCCTCAAAATTTCAAAGGGTTTTTATGGATAAAGAATATAATCTTGCAGTGTTCTCTGGTCTTGCGATTTATCATGCTATTTCATAGTGTAAACTGTCTAACATCTTGGATTATGCATCTTTATTTGTAAATTTCGTGGTCAATGAAATAGTTTCCTAAGAAAAAGACATGTGTGAGATTCCACATTGATTGGAGAGAAGAACGAGTGTCGGTGAGGACTCTGGGTTTCGGAGGGGGTAGATTTTGAGATTCCACGTCGGTTGGAGAGGGGAATGAGGCATCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGGCGCGTTTCAAAAATCTTGAGGGGAAGCCCGAGAGGGAAAATCCAAAGAGGACAATATTTGCTAGTGGCAGGCTTGTGCTGATACAACATGCCCGTAAATAATGCCTTAAAATATCTCGCTCTTCATCCTTTTCAATCTTCTGATGTAATAAGCATTGTAACTACCTTATTGTAATCGACTTGGTCGTCGTTGTCATGATATTATTCTAGAGCGGGGTCTTGAAACTTATGATTTCGTCATATGCATGTGGAACCAAGAATTTGCCTCGCGGACTTTCGTCATTGTGGCACATGTCTTGTTTAACTTGTTTCTTGGATATACATCCAGTTCGTATTCTCAATTACTCGGATTTCTTCAAATTTTCTGCCTTGAACTTGCCCCTTTGCAGTGTCGATTTTAACTTGACATAATAAGTCAAATGGAAAGTATGAACGAAACGATCTTAGCTCACTGTATTGGTCTCCTATCGTGCAGGTGGGACGTCGGATCTTTGTGCAGATCATGCGAATAGATGAAGCTAAAAATGATTTGATACTAAGTGAGAGACAAGCTTGGGTCAGTTTCACCACTACATTCTTTTCGAATTTTTTCTCCTCGAGCACTGGACGAGTACACCAATAAATAGTCGATTTACGTATTTATCGTAGGAAACGCTGTATCTCCGTGAGGGAACTCTTCTAGAAGGGACCGTGAAGAAAATATTTCCTTATGGAGCTCAAATAAGAATTGGTGATACAAACAGAAGGTGAGTATCAATGTAGATTGCTTTTATAGCTAAAAATAGCTGATTGAGATGAACTGTGAAGAAATAGTTTCTGCTTTGACTGGGCTTGCCATATTCTGTTGTTCTTATTAATCTTTAGTTTCTGAAAAATTGTTGATGCATCCACCTAAATGTTTCTCAGCGGATTACTCCATGTTTCGAACATAACCCGTGCCCGAGTTACCTCGGTGAGCGACTTACTCGCAGTGGGCGAAAAGGTCAAAGTTCTTGTCGTGAAGTCGATGTTTCCCGACAAGATATCCCTAAGGTAATTGACGAGTATATTACTCGATTTAATAGAGTCGTGATAACGATTTTTCTTTTGTGGTTTTACAGCATTGCAGACCTCGAAAGTGAGCCCGGCCTCTTTATATCGAACAAGGAGGTAACTCTAGTCATACCGATCTTCCTCACCGACGAACTTCATTTTCTTTGAAATTTGACTCGAGTCGTTTTTTTCTTTTCCTATATTAGAAGGTATTTTCAGAGGCCAAGATCATGGCGAAGAAGTACAGGCAACGGCTACCTGTGGTCGAAGGCTTTACAAGGCCCGAACCTGCTCCAACTACAGATCTTCCGTTTGAAAACGAATCGAGCATGTATGCAAATTGGAAGTGGTTCAAATTCGAACGGTAGTTGTCGAGTTAAACGATCTTTCTTTCATGCTTCCCAACCACGCCTTACTCCAGGCAAGCATTCTTACCGTTATCGTTATCGTTATCGTTATCGAATTTTAGGAACGATAAAAATCAAGGGAATGGGAAGTGTAAAAGATCAAATTTTGAACACCATTCTGTCTTAGTTCAGCTGTTTCATTGAAGTTCTTAGCCGCACTTTTTCCATGCATAAATTTTGTCATATTAGCACTTAAGTCCCTCTACTTTCATTTATTTCATTTCAATTCCTATAGTTTTATAAACCAAATAAATTATCATTTTAAAAATAAAATGAAAAGGGATTTGAACGTGGAAGCTGAAATGCCATAAATTCAGTAAAATTTGTCCCCAATATTATGTCCATTCACTTTGTATTCTATTGCCCTAATTTGCTTTTAATAAAAAATAACATTTTTGGGTAAATTTTTTTATTTATTGATATTAGTGAATATTAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTGTTATTATTATTAAAAAATTAAAACTCCACTGAGATTATGAAAAAGCTTATAATAAATTATAATGTCTAAAAGCTGTCACCTCCTGTGTGTTTTTTTTATAGGTTGGGGGCTCCAAGACTTAAATGGCCGATAACTGCTTCCCTACATATCCCCCAACTCCCTCCCTTTGAATATTTAAATAAAAAAATTTCAAATAAATTAACAAAAA

mRNA sequence

ATGATGCTAATCCTTGCGGGACTTCAACCCTGTAAGTGTCTTTGCGCTCTCAATTCGTCATCTGAGCCTCAAGATTTCTCAGTTTCATCTAATTCCCTTAGGAATTCAGCATTTCTCACTCCACGAATCTCAAATTTCAAATTGTATTCCACTTCTAATTGGTCTAATAACTGTGATAAATCCAAGAAATTGTCATTGCGAAGGAGGAGTAGCGTTGTATTTTGCTCTAGGAATGAAATTTTTGATAATTTCTCGAGCACTCAGTTGCCGAATAAGCCTAGCGAGGATGAAATTCAAGGCATCGATGAGATTGGTTTGCTAAATAAACCTTCTCCTGCTCCTATAAACAATGGAGTTTCATCAGAATTTGACGAAGAAGTTGAAAATCCCGACGAGAATGAAGCCCTAGCGCCATTTATGAAGTTCTTTAAGAATACAGATGCTGTAGAAGAAGAGGAAGAAGAGGAAAAGGCGGTAAGAGCTTTTGAAGAGAAAATTGATGGAGATGAGGAGATTGTGAAAGCCAATAAGTTAAATGTTGAGTACTATGAGCCCAAACCTGGAGATGTCGTGGTCGGTGTGGTTGTCTCCGGTAATGAAAACAAGCTCGACATCAATGTCGGGGCGGATCTATTAGGAACAATGTTGACAAAAGAGGTGCTTCCATTGTATGACAAAGAGGTGGAATTCTTGATGTGTGATCTAGACAAGGATGCCGAGTCTTTTATGATGAATGGGAAGATGGGGCTGGTGAAATACGACGATGCTGTTAGCCGTGGACTGGGGCCGGGGCGCCCTGTCGTGGAGACTGGCACAGTTTTGTTTGCTGAGGTTTTGGGAAGGACACTTAGTGGTCGCCCATTGCTCTCGACTAGAAGGTTGTTTCGACGGTTAGCTTGGCATCGAGTGAGGCAGATTAAACGACTCGATGAGCCGATTGAAGTTAAAATATCAGAGTGGAATACTGGAGGCCTTCTTACAAGAATTGAGGGTTTGCGAGCGTTTCTTCCGAAGGCTGAGTTATTGAATCGAGTAAATAACTTCACAGAATTGAAAGAAAATGTGGGACGTCGGATCTTTGTGCAGATCATGCGAATAGATGAAGCTAAAAATGATTTGATACTAAGTGAGAGACAAGCTTGGGAAACGCTGTATCTCCGTGAGGGAACTCTTCTAGAAGGGACCGTGAAGAAAATATTTCCTTATGGAGCTCAAATAAGAATTGGTGATACAAACAGAAGCGGATTACTCCATGTTTCGAACATAACCCGTGCCCGAGTTACCTCGGTGAGCGACTTACTCGCAGTGGGCGAAAAGGTCAAAGTTCTTGTCGTGAAGTCGATGTTTCCCGACAAGATATCCCTAAGCATTGCAGACCTCGAAAGTGAGCCCGGCCTCTTTATATCGAACAAGGAGAAGGTATTTTCAGAGGCCAAGATCATGGCGAAGAAGTACAGGCAACGGCTACCTGTGGTCGAAGGCTTTACAAGGCCCGAACCTGCTCCAACTACAGATCTTCCGTTTGAAAACGAATCGAGCATGTATGCAAATTGGAAGTGGTTCAAATTCGAACGGTAGTTGTCGAGTTAAACGATCTTTCTTTCATGCTTCCCAACCACGCCTTACTCCAGGTTGGGGGCTCCAAGACTTAAATGGCCGATAACTGCTTCCCTACATATCCCCCAACTCCCTCCCTTTGAATATTTAAATAAAAAAATTTCAAATAAATTAACAAAAA

Coding sequence (CDS)

ATGATGCTAATCCTTGCGGGACTTCAACCCTGTAAGTGTCTTTGCGCTCTCAATTCGTCATCTGAGCCTCAAGATTTCTCAGTTTCATCTAATTCCCTTAGGAATTCAGCATTTCTCACTCCACGAATCTCAAATTTCAAATTGTATTCCACTTCTAATTGGTCTAATAACTGTGATAAATCCAAGAAATTGTCATTGCGAAGGAGGAGTAGCGTTGTATTTTGCTCTAGGAATGAAATTTTTGATAATTTCTCGAGCACTCAGTTGCCGAATAAGCCTAGCGAGGATGAAATTCAAGGCATCGATGAGATTGGTTTGCTAAATAAACCTTCTCCTGCTCCTATAAACAATGGAGTTTCATCAGAATTTGACGAAGAAGTTGAAAATCCCGACGAGAATGAAGCCCTAGCGCCATTTATGAAGTTCTTTAAGAATACAGATGCTGTAGAAGAAGAGGAAGAAGAGGAAAAGGCGGTAAGAGCTTTTGAAGAGAAAATTGATGGAGATGAGGAGATTGTGAAAGCCAATAAGTTAAATGTTGAGTACTATGAGCCCAAACCTGGAGATGTCGTGGTCGGTGTGGTTGTCTCCGGTAATGAAAACAAGCTCGACATCAATGTCGGGGCGGATCTATTAGGAACAATGTTGACAAAAGAGGTGCTTCCATTGTATGACAAAGAGGTGGAATTCTTGATGTGTGATCTAGACAAGGATGCCGAGTCTTTTATGATGAATGGGAAGATGGGGCTGGTGAAATACGACGATGCTGTTAGCCGTGGACTGGGGCCGGGGCGCCCTGTCGTGGAGACTGGCACAGTTTTGTTTGCTGAGGTTTTGGGAAGGACACTTAGTGGTCGCCCATTGCTCTCGACTAGAAGGTTGTTTCGACGGTTAGCTTGGCATCGAGTGAGGCAGATTAAACGACTCGATGAGCCGATTGAAGTTAAAATATCAGAGTGGAATACTGGAGGCCTTCTTACAAGAATTGAGGGTTTGCGAGCGTTTCTTCCGAAGGCTGAGTTATTGAATCGAGTAAATAACTTCACAGAATTGAAAGAAAATGTGGGACGTCGGATCTTTGTGCAGATCATGCGAATAGATGAAGCTAAAAATGATTTGATACTAAGTGAGAGACAAGCTTGGGAAACGCTGTATCTCCGTGAGGGAACTCTTCTAGAAGGGACCGTGAAGAAAATATTTCCTTATGGAGCTCAAATAAGAATTGGTGATACAAACAGAAGCGGATTACTCCATGTTTCGAACATAACCCGTGCCCGAGTTACCTCGGTGAGCGACTTACTCGCAGTGGGCGAAAAGGTCAAAGTTCTTGTCGTGAAGTCGATGTTTCCCGACAAGATATCCCTAAGCATTGCAGACCTCGAAAGTGAGCCCGGCCTCTTTATATCGAACAAGGAGAAGGTATTTTCAGAGGCCAAGATCATGGCGAAGAAGTACAGGCAACGGCTACCTGTGGTCGAAGGCTTTACAAGGCCCGAACCTGCTCCAACTACAGATCTTCCGTTTGAAAACGAATCGAGCATGTATGCAAATTGGAAGTGGTTCAAATTCGAACGGTAG
Homology
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BLAST of CmoCh15G005780 vs. Swiss-Prot
Match: RR1_SPIOL (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-26
Identity = 78/230 (33.91%), Postives = 133/230 (57.83%), Query Frame = 1 

Query: 288 LLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNN 347
           +LS R++   LAW R RQ++  D  ++ KI   N GG++  +EGLR F+P     +++++
Sbjct: 162 ILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVP----FSQISS 221

Query: 348 FTELKENVGRRIFVQIMRIDEAKNDLILSERQAW--ETLYLREGTLLEGTVKKIFPYGAQ 407
            +  +E + + I ++ + +DE ++ L++S R+A       L  G+++ GTV+ + PYGA 
Sbjct: 222 KSSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAF 281

Query: 408 IRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVK-SMFPDKISLSIADLESEP 467
           I IG  N  GLLHVS I+  RV+ ++ +L  G+ +KV+++       ++SLS   LE  P
Sbjct: 282 IDIGGIN--GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 341

Query: 468 GLFISNKEKVFSEAKIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSM 515
           G  I N + VF +A+ MA+ +RQR+   E   R +      L F+ ES +
Sbjct: 342 GDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADM-----LRFQPESGL 380

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BLAST of CmoCh15G005780 vs. Swiss-Prot
Match: RS1_SYNP6 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4)

HSP 1 Score: 120.9 bits (302), Expect = 4.1e-26
Identity = 78/210 (37.14%), Postives = 120/210 (57.14%), Query Frame = 1 

Query: 285 GRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNR 344
           G+  LS RR+    AW RVRQ++  D  +  ++   N GG L RIEGLR F+P + +  R
Sbjct: 94  GQLTLSIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFIPGSHISTR 153

Query: 345 VNNFTELKEN-VGRRIFVQIMRIDEAKNDLILSERQAW---ETLYLREGTLLEGTVKKIF 404
                + KE+ VG  + ++ + +DE +N L+LS R+A    +   L  G ++ G V+ I 
Sbjct: 154 -----KAKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGIK 213

Query: 405 PYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVK-SMFPDKISLSIAD 464
           PYGA I IG    SGLLH+S I+   + +   +  V ++VKV+++       +ISLS   
Sbjct: 214 PYGAFIDIGGV--SGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRISLSTKQ 273

Query: 465 LESEPGLFISNKEKVFSEAKIMAKKYRQRL 490
           LE EPG  + N E V+ +A+ MA +YR++L
Sbjct: 274 LEPEPGDMVRNPEVVYEKAEEMAAQYREKL 296

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BLAST of CmoCh15G005780 vs. Swiss-Prot
Match: RPS1_ARATH (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-25
Identity = 79/230 (34.35%), Postives = 129/230 (56.09%), Query Frame = 1 

Query: 288 LLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNN 347
           LLS R +   LAW R RQ++  D  ++ K+   N GGL+  +EGLR F+P     +++++
Sbjct: 165 LLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVP----FSQISS 224

Query: 348 FTELKENVGRRIFVQIMRIDEAKNDLILSERQAW--ETLYLREGTLLEGTVKKIFPYGAQ 407
               +E + + I ++ + +DE +  L+LS R+A       L  G+++ G V+ + PYGA 
Sbjct: 225 KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAF 284

Query: 408 IRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVK-SMFPDKISLSIADLESEP 467
           I IG  N  GLLHVS I+  RV+ ++ +L  G+ +KV+++       ++SLS   LE  P
Sbjct: 285 IDIGGIN--GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTP 344

Query: 468 GLFISNKEKVFSEAKIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSM 515
           G  I N + VF +A+ MA+ +RQR+   E   R +      L F+ ES +
Sbjct: 345 GDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADM-----LRFQPESGL 383

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BLAST of CmoCh15G005780 vs. Swiss-Prot
Match: RS1A_SYNY3 (30S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rps1A PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-25
Identity = 100/338 (29.59%), Postives = 154/338 (45.56%), Query Frame = 1 

Query: 183 YEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESF 242
           Y   PGD+V G V S       I++GA       T   +P+ +                 
Sbjct: 26  YHFSPGDIVAGTVFSMESRGALIDIGAK------TAAYIPIQE----------------- 85

Query: 243 MMNGKMGLVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHR 302
                M + + DD       P   +    T  F  +      G+  LS RR+    AW R
Sbjct: 86  -----MSINRVDD-------PEEVLQPNETREFFILTDENEDGQLTLSIRRIEYMRAWER 145

Query: 303 VRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKEN-VGRRIFV 362
           VRQ++  D  +   +   N GG L RIEGLR F+P + +  R     E KE+ VG  + +
Sbjct: 146 VRQLQAEDATVRSNVFATNRGGALVRIEGLRGFIPGSHISAR-----EAKEDLVGEDLPL 205

Query: 363 QIMRIDEAKNDLILSERQAW---ETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLH 422
           + + +DE +N L+LS R+A    +   L    ++ G+V+ I PYGA I IG    SGLLH
Sbjct: 206 KFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGIKPYGAFIDIGGV--SGLLH 265

Query: 423 VSNITRARVTSVSDLLAVGEKVKVLVVK-SMFPDKISLSIADLESEPGLFISNKEKVFSE 482
           +S I+   + +   +  V +++KV+++       +ISLS   LE EPG  + +++ V   
Sbjct: 266 ISEISHDHIDTPHSVFNVNDEIKVMIIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEM 321

Query: 483 AKIMAKKYRQ-RLPVVEGFTRPEPAPTTDLPFENESSM 515
           A  MA+ +RQ RL   +G     P    D   E + S+
Sbjct: 326 ADEMAEIFRQKRLAEAQGIPYEPPTSVDDTDDEEDESL 321

[Close]
BLAST of CmoCh15G005780 vs. Swiss-Prot
Match: RS1_SYNE7 (30S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsA PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-20
Identity = 66/219 (30.14%), Postives = 116/219 (52.97%), Query Frame = 1 

Query: 275 FAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRA 334
           F  +  +   G+  +S R L    AW RV +++   + ++VK++  N GG+   +EGLRA
Sbjct: 80  FLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLEGLRA 139

Query: 335 FLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQAWETLYLRE---GTL 394
           F+P++ L    N   +L    G+ + V  + ++ A   L+LSERQA  T  +RE   G L
Sbjct: 140 FIPRSHL----NEKEDLDSLKGKTLTVAFLEVNRADKKLVLSERQAARTALVREIEVGQL 199

Query: 395 LEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVK-SMFP 454
           + G V  + P+G  + +G    + LL ++ I++  V  V  +  +G+ ++ LVV      
Sbjct: 200 INGKVTGLKPFGVFVDLG--GATALLPINQISQKFVADVGAIFKIGDPIQALVVAIDNTK 259

Query: 455 DKISLSIADLESEPGLFISNKEKVFSEAKIMAKKYRQRL 490
            +ISLS   LE+ PG  + N  ++ + A   A++ R++L
Sbjct: 260 GRISLSTKVLENHPGEILENVAELQASAADRAERARKQL 292

[Close]
BLAST of CmoCh15G005780 vs. TrEMBL
Match: A0A0A0K9H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G053320 PE=4 SV=1)

HSP 1 Score: 886.3 bits (2289), Expect = 1.8e-254
Identity = 461/530 (86.98%), Postives = 486/530 (91.70%), Query Frame = 1 

Query: 2   MLILAGLQPCKCLCALNSSSEPQDFSVSSNSLRNSAFLT------PRISNFKLYSTSNWS 61
           M+ILAGLQPCK LC  NSS E QDF VSSNS+RNSAFL        RISN  L STS  S
Sbjct: 1   MVILAGLQPCKYLCVPNSSFESQDFLVSSNSVRNSAFLAVPRLPVQRISNSNLCSTSTCS 60

Query: 62  NNCDKSKKLSLRRRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPI 121
           +NC+KSKKL+ RRRSSV+FCSRN+IFDN SSTQLP+KP  D IQ IDEIGLLNKPSPAPI
Sbjct: 61  DNCNKSKKLTFRRRSSVLFCSRNDIFDNLSSTQLPDKPRVDGIQEIDEIGLLNKPSPAPI 120

Query: 122 NNGVSSEFDEEVENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKA 181
           +NGVSSE D+EVENPDENEALAPFMKFFKN D+ +E+EEEE+A+RAFEE IDGD+E   A
Sbjct: 121 SNGVSSEIDQEVENPDENEALAPFMKFFKNKDSADEKEEEERALRAFEETIDGDDETEIA 180

Query: 182 NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDL 241
           NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKE+E L CDL
Sbjct: 181 NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEMESLTCDL 240

Query: 242 DKDAESFMMNGKMGLVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLF 301
           DKDAESFMMNGKMGLVKY+DA SRG GPGRPVVE GTVLFAEVLGRTLSGRPLLSTRRLF
Sbjct: 241 DKDAESFMMNGKMGLVKYEDAFSRGQGPGRPVVENGTVLFAEVLGRTLSGRPLLSTRRLF 300

Query: 302 RRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 361
           RRLAWHRVRQIK LDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV
Sbjct: 301 RRLAWHRVRQIKGLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 360

Query: 362 GRRIFVQIMRIDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 421
           GRRIFVQI R+DEAKNDLILSE+QAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG
Sbjct: 361 GRRIFVQITRMDEAKNDLILSEKQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 420

Query: 422 LLHVSNITRARVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVF 481
           LLHVSNITRARVTSVSDLL+VGEKV VLVVKSMFPDKISLSIADLESEPGLFI+NKEKVF
Sbjct: 421 LLHVSNITRARVTSVSDLLSVGEKVNVLVVKSMFPDKISLSIADLESEPGLFITNKEKVF 480

Query: 482 SEAKIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           SEAKIMAKKYRQRLP ++G  RP+ APTTDLPFENESSMYANWKWFKFER
Sbjct: 481 SEAKIMAKKYRQRLPSLDGILRPKTAPTTDLPFENESSMYANWKWFKFER 530

[Close]
BLAST of CmoCh15G005780 vs. TrEMBL
Match: V4V6U6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000894mg PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 7.9e-186
Identity = 345/520 (66.35%), Postives = 413/520 (79.42%), Query Frame = 1 

Query: 8   LQPCKCLCALNSSSEPQDFSVSSNSLRNSAFLTPRISNFKLYSTSNWSNNCDKSKKLSLR 67
           +QPCK       +S P   + S     N+ +  P+  NF  ++ S               
Sbjct: 5   VQPCKSFTFTLLNSAPPLSTCSFVQNGNTKYPLPQTRNFHSFAAS-----------FRFL 64

Query: 68  RRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVSSEFDEEV 127
           R + +VFCS+ ++FD+ SS Q P     + ++G +E+ LLNKP+  PI+NGV+SE D++ 
Sbjct: 65  RSTHIVFCSQKDVFDDLSSAQFPENVENEGLEGNEELELLNKPNLVPISNGVASEVDKKS 124

Query: 128 ENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKP 187
           E PDE EALAPF+KFFK  D+ EE EEE   V    E I  D+++ + +K++VEYYEPKP
Sbjct: 125 EKPDEEEALAPFLKFFKPRDSAEEVEEEGSEVGVSRESIGVDDKVGE-DKVSVEYYEPKP 184

Query: 188 GDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGK 247
           GD V+GVVVSGNENKLD+NVGADLLGTMLTKEVLPLYDKE++FL+CDL KDAE FM+ GK
Sbjct: 185 GDFVIGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMDFLLCDLKKDAEEFMVRGK 244

Query: 248 MGLVKYDDAV--SRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQ 307
           MG+VK DDA+  S G GPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFR++AWHRVRQ
Sbjct: 245 MGIVKDDDAIAMSGGSGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRKMAWHRVRQ 304

Query: 308 IKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMR 367
           IK+L+EPIEVK +EWNTGGLLTRIEGLRAFLPKAELL+RVNNFTELKE VGRR++VQI R
Sbjct: 305 IKQLNEPIEVKFTEWNTGGLLTRIEGLRAFLPKAELLSRVNNFTELKEKVGRRMYVQITR 364

Query: 368 IDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRA 427
           I+E  NDLILSER+AW TL LREGTLLEGTVKKI+PYGAQIRIGD+NRSGLLH+SN++R 
Sbjct: 365 INEDTNDLILSEREAWATLNLREGTLLEGTVKKIYPYGAQIRIGDSNRSGLLHISNMSRT 424

Query: 428 RVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEAKIMAKKY 487
           RVTSVSDLL  GE+VKVLVVKSMFPDKISLSIADLESEPGLF+S+KE+VFSEA+ MAKKY
Sbjct: 425 RVTSVSDLLNEGERVKVLVVKSMFPDKISLSIADLESEPGLFVSDKERVFSEAEEMAKKY 484

Query: 488 RQRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           RQ+LP V    + E  PT  LPF++E+SM ANWKWF+FE+
Sbjct: 485 RQKLPAVSVSPKSESLPTDTLPFDSEASMCANWKWFRFEQ 512

[Close]
BLAST of CmoCh15G005780 vs. TrEMBL
Match: A0A067GYS4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010232mg PE=4 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 5.6e-184
Identity = 344/503 (68.39%), Postives = 408/503 (81.11%), Query Frame = 1 

Query: 32  SLRNSAFLTPRISNFKLYSTSNWSNNCDKSKKL-----SLR--RRSSVVFCSRNEIFDNF 91
           +L NSA   P +S        N      +S+K      S R  R + +VFCS+ ++FD+ 
Sbjct: 14  TLLNSA---PPLSTCSFVQNGNAKYPLQQSRKFHSFAASFRFLRSTHIVFCSQKDVFDDL 73

Query: 92  SSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVSSEFDEEVENPDENEALAPFMKFFK 151
           SS Q P     + ++G +E+ LLNKP+  PI+NGV+SE D++ E PDE EALAPF+KFFK
Sbjct: 74  SSAQFPENVENEGLEGNEELELLNKPNLVPISNGVASEVDKKSEKPDEEEALAPFLKFFK 133

Query: 152 NTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDVVVGVVVSGNENKLD 211
             D+ EE EEE   V    E ID D+++ + +K++VEYYEPKPGD V+GVVVSGNENKLD
Sbjct: 134 PRDSAEEVEEEGSEVGVSRESIDVDDKVGE-DKVSVEYYEPKPGDFVIGVVVSGNENKLD 193

Query: 212 INVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAV--SRGLG 271
           +NVGADLLGTMLTKEVLPLYDKE++FL+CDL KDAE FM+ GKMG+VK DDA+  S G G
Sbjct: 194 VNVGADLLGTMLTKEVLPLYDKEMDFLLCDLKKDAEEFMVRGKMGIVKDDDAIAMSGGSG 253

Query: 272 PGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNT 331
           PGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFR++AWHRVRQIK+L+EPIEVK +EWNT
Sbjct: 254 PGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRKMAWHRVRQIKQLNEPIEVKFTEWNT 313

Query: 332 GGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQAWE 391
           GGLLTRIEGLRAFLPKAELL+RVNNFTELKE VGRR++VQI RI+E  NDLILSER+AW 
Sbjct: 314 GGLLTRIEGLRAFLPKAELLSRVNNFTELKEKVGRRMYVQITRINEDTNDLILSEREAWA 373

Query: 392 TLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKV 451
           TL LREGTLLEGTVKKI+PYGAQIRIGD+NRSGLLH+SN++R RVTSVSDLL  GE+VKV
Sbjct: 374 TLNLREGTLLEGTVKKIYPYGAQIRIGDSNRSGLLHISNMSRTRVTSVSDLLNEGERVKV 433

Query: 452 LVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEAKIMAKKYRQRLPVVEGFTRPEPAP 511
           LVVKSMFPDKISLSIADLESEPGLF+S+KE+VFSEA+ MAKKYRQ+LP V    + E  P
Sbjct: 434 LVVKSMFPDKISLSIADLESEPGLFVSDKERVFSEAEEMAKKYRQKLPAVSVSPKSESLP 493

Query: 512 TTDLPFENESSMYANWKWFKFER 526
           T   PF++E+SM ANWKWF+FE+
Sbjct: 494 TDTPPFDSEASMCANWKWFRFEQ 512

[Close]
BLAST of CmoCh15G005780 vs. TrEMBL
Match: F6HJE6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02600 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 4.5e-181
Identity = 349/527 (66.22%), Postives = 413/527 (78.37%), Query Frame = 1 

Query: 1   MMLILAGLQPCKCLCALNSSSEPQDFSVSSNSLRNSAFLTPRISNFKLYSTSNWSNNCDK 60
           M ++LA   P   L    SS  P + ++S  S  N    TP++   K  S +  S     
Sbjct: 15  MPIVLA--HPSNSLSFRFSSHPPLNSNISFTSFHN----TPKLPLRKPQSKTLVS----- 74

Query: 61  SKKLSLRRRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVS 120
            K   + R + + FCS N+IF + SSTQLP  P  D +Q I+E+ LL KPSP P+NNG +
Sbjct: 75  PKNSPVWRTTQISFCSPNDIFYDISSTQLPETPEIDGVQDIEELELLGKPSPVPLNNGSA 134

Query: 121 SEFDEEVENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDE--EIVKANKL 180
           S+ D E++ PD++EALAPF+KFFK        E  E+A  A  E  DG E  E      +
Sbjct: 135 SDIDSELKKPDKDEALAPFLKFFK------PRESSEEANGASGE--DGSEISESGSTKLV 194

Query: 181 NVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKD 240
           +VEYYEPKPGD VVGVVVSGNENKLD+NVGADLLGTMLTKEVLPLYDKE+E+L+CD++KD
Sbjct: 195 SVEYYEPKPGDFVVGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDVEKD 254

Query: 241 AESFMMNGKMGLVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRL 300
           AE FM++GKM +V+ DDA+SR    G PVVETGTVLFAEVLGRTLSGRPLLSTRR FRR+
Sbjct: 255 AEEFMVHGKMSIVRNDDALSRVPMQGSPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRI 314

Query: 301 AWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRR 360
           AWHRVRQIK+L+EPIEV+I+EWNTGGLLTRIEGLRAFLPKAELLNRV +FTELKENVGRR
Sbjct: 315 AWHRVRQIKQLNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELLNRVKSFTELKENVGRR 374

Query: 361 IFVQIMRIDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLH 420
           ++VQI RIDEAKNDLILSE+ AWE  +L+EGTLLEGTVKKIFPYGAQI IG++NRSGLLH
Sbjct: 375 LYVQITRIDEAKNDLILSEKDAWEKSHLQEGTLLEGTVKKIFPYGAQIMIGESNRSGLLH 434

Query: 421 VSNITRARVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEA 480
           +SNITRARVTSVSDLL V EKVKV+VVKSMFP+KI+LSIADLESEPGLF+SNKEKVFS+A
Sbjct: 435 ISNITRARVTSVSDLLTVDEKVKVMVVKSMFPNKIALSIADLESEPGLFLSNKEKVFSDA 494

Query: 481 KIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           + MAKKYRQ+LP V    + EP PT  LPF +E+S+YANW+WFKFER
Sbjct: 495 EEMAKKYRQKLPAVTATRKLEPLPTDALPFHDEASLYANWRWFKFER 522

[Close]
BLAST of CmoCh15G005780 vs. TrEMBL
Match: B9SM67_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296330 PE=4 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 2.2e-180
Identity = 324/456 (71.05%), Postives = 388/456 (85.09%), Query Frame = 1 

Query: 70  SSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVSSEFDEEVEN 129
           + + FCS+N+ FDN SSTQ+P +  ED I+  +E+ LLNKPSP  INNG+S E D+E E 
Sbjct: 20  TQISFCSQNDTFDNLSSTQVPEEQEEDRIRENEELELLNKPSPVVINNGLSIEVDKESET 79

Query: 130 PDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGD 189
            D++EALAPF+KFF+  D++EE +EE K +   E   +G+ E  +A K+NV+YYEPKPGD
Sbjct: 80  IDKDEALAPFLKFFEPRDSLEEIKEEGKELGVIEGNSNGNNEDKEAKKVNVDYYEPKPGD 139

Query: 190 VVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMG 249
            VVGVVVSGNE+KLD+NVGADLLGTMLTKEVLPLYDKE+E+L+CD++KDAE FM+ GK+G
Sbjct: 140 FVVGVVVSGNESKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDMEKDAERFMVRGKIG 199

Query: 250 LVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRL 309
           ++K + A+S G G GRPVVETGT+LFAEVLGRTLSGRPLLSTRRLFRR+AWHRVRQIK L
Sbjct: 200 IIKDEAAMSGGPGLGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQIKEL 259

Query: 310 DEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEA 369
           +EPIEV+I+EWNTGGLLTRIEGLRAFLPKAEL+NRV NF ELKENV RRI V I RI+E 
Sbjct: 260 NEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVKNFKELKENVSRRINVLITRINED 319

Query: 370 KNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTS 429
            N+LILSER+AWE L LREGTLLEG V+KIFPYGAQ+RIG+TNRSGLLH+SNITR+RVT+
Sbjct: 320 NNELILSEREAWEMLNLREGTLLEGNVRKIFPYGAQVRIGETNRSGLLHISNITRSRVTA 379

Query: 430 VSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEAKIMAKKYRQRL 489
           VSDLL V E+VKVLVVKSMFPDKISLSIADLESEPGLF+SNKEKVF+EA+ MAKKYRQ+L
Sbjct: 380 VSDLLKVDERVKVLVVKSMFPDKISLSIADLESEPGLFVSNKEKVFAEAEEMAKKYRQKL 439

Query: 490 PVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           P V    +     ++ L F++E++MYANWKWFKFER
Sbjct: 440 PAVLATRKSATPLSSTLTFDDEATMYANWKWFKFER 475

[Close]
BLAST of CmoCh15G005780 vs. TAIR10
Match: AT1G71720.1 (AT1G71720.1 Nucleic acid-binding proteins superfamily)

HSP 1 Score: 530.0 bits (1364), Expect = 1.6e-150
Identity = 299/532 (56.20%), Postives = 379/532 (71.24%), Query Frame = 1 

Query: 9   QPCKCLCALNSSSEPQDFSVSSNSLRNSAFL--------TPRISNFKLYSTSN--WSNNC 68
           QPCK L  L +SS       SS+ +R+S  +        + ++S F+ + T +       
Sbjct: 7   QPCKSLPILTASS-------SSSLIRSSGDVRECIDFRASEKVSKFQFHVTLSPFAFRGF 66

Query: 69  DKSKKLSLRRRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNG 128
              ++ ++R    + FCSR ++          +      I   +EI LLNKP+P P +  
Sbjct: 67  SICREFAVRGAYGIRFCSREDV----------SGVGNGGIVAEEEIELLNKPNPLPKSE- 126

Query: 129 VSSEFDEEVENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKL 188
                +EE    D++  L PF+KFFK      EEE E       E ++  +      +++
Sbjct: 127 -----NEESGKADDDAILEPFLKFFK-----PEEEGE-----GIESEVSDE-----TDRV 186

Query: 189 NVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKD 248
           +VEYY+PKPGD VVGVVVSGNENKLD+N+GAD+LGTMLTKE+LPLYDKE+++L+CDL  D
Sbjct: 187 SVEYYDPKPGDFVVGVVVSGNENKLDVNIGADMLGTMLTKEILPLYDKELDYLLCDLKYD 246

Query: 249 AESFMMNGKMGLVKYDD---AVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLF 308
           AE F++NGKMG+VK DD    ++     GRPVVE GTV+FAEVLGRTLSGRPLLS+RR F
Sbjct: 247 AEEFLVNGKMGIVKDDDEGVEIAEFARQGRPVVEIGTVVFAEVLGRTLSGRPLLSSRRYF 306

Query: 309 RRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 368
           RR+AWHRVRQIK+L+EPIEVKI+EWNTGGLLTRIEGLRAF+PK EL+ +VN FTELKENV
Sbjct: 307 RRIAWHRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFIPKQELVKKVNTFTELKENV 366

Query: 369 GRRIFVQIMRIDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 428
           GRR  VQI R++E KNDLILSE+ AWE LYLREGTLLEGTV KI PYGAQ+++GD++RSG
Sbjct: 367 GRRFLVQITRLNEDKNDLILSEKVAWEKLYLREGTLLEGTVVKILPYGAQVKLGDSSRSG 426

Query: 429 LLHVSNITRARVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVF 488
           LLH+SNITR R+ SVSD+L V E VKVLVVKS+FPDKISLSIADLESEPGLFIS++EKVF
Sbjct: 427 LLHISNITRRRIGSVSDVLQVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVF 486

Query: 489 SEAKIMAKKYRQRLPVVEGFTRP---EPAPTTDLPFENESSMYANWKWFKFE 525
           +EA+ MAKKYR+++P+V   T P    P  T+  P   +  +YANW+WFKFE
Sbjct: 487 TEAEEMAKKYREKMPLVA--TSPISDRPPITSSFPQGKDEEIYANWEWFKFE 498

[Close]
BLAST of CmoCh15G005780 vs. TAIR10
Match: AT5G30510.1 (AT5G30510.1 ribosomal protein S1)

HSP 1 Score: 119.4 bits (298), Expect = 6.7e-27
Identity = 79/230 (34.35%), Postives = 129/230 (56.09%), Query Frame = 1 

Query: 288 LLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNN 347
           LLS R +   LAW R RQ++  D  ++ K+   N GGL+  +EGLR F+P     +++++
Sbjct: 165 LLSLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVP----FSQISS 224

Query: 348 FTELKENVGRRIFVQIMRIDEAKNDLILSERQAW--ETLYLREGTLLEGTVKKIFPYGAQ 407
               +E + + I ++ + +DE +  L+LS R+A       L  G+++ G V+ + PYGA 
Sbjct: 225 KAAAEELLEKEIPLKFVEVDEEQTKLVLSNRKAVADSQAQLGIGSVVLGVVQSLKPYGAF 284

Query: 408 IRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVK-SMFPDKISLSIADLESEP 467
           I IG  N  GLLHVS I+  RV+ ++ +L  G+ +KV+++       ++SLS   LE  P
Sbjct: 285 IDIGGIN--GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVSLSTKKLEPTP 344

Query: 468 GLFISNKEKVFSEAKIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSM 515
           G  I N + VF +A+ MA+ +RQR+   E   R +      L F+ ES +
Sbjct: 345 GDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADM-----LRFQPESGL 383

[Close]
BLAST of CmoCh15G005780 vs. TAIR10
Match: AT3G23700.1 (AT3G23700.1 Nucleic acid-binding proteins superfamily)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-11
Identity = 55/180 (30.56%), Postives = 88/180 (48.89%), Query Frame = 1 

Query: 300 WHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELL------NRVNNFTEL-K 359
           W   +   +  +  E ++  +N GGLL R   L  FLP  +L           +  E+ K
Sbjct: 97  WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156

Query: 360 ENVGRRIFVQIMRIDEAKNDLILSERQAWETLYLRE---GTLLEGTVKKIFPYGAQIRI- 419
             VG ++ V++++ DE    LILSE+ A    Y +    G +  G V  +  YGA I + 
Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216

Query: 420 ---GDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKVLVVK-SMFPDKISLSIADLESEP 465
              G  + +GL+HVS ++   V  V D+L  G++V+V+V        +I+LSI  LE +P
Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 276

[Close]
BLAST of CmoCh15G005780 vs. NCBI nr
Match: gi|659113732|ref|XP_008456726.1| (PREDICTED: uncharacterized protein LOC103496585 [Cucumis melo])

HSP 1 Score: 891.3 bits (2302), Expect = 7.9e-256
Identity = 465/530 (87.74%), Postives = 487/530 (91.89%), Query Frame = 1 

Query: 2   MLILAGLQPCKCLCALNSSSEPQDFSVSSNSLRNSAFLT------PRISNFKLYSTSNWS 61
           MLILAGLQ CK LC  NSS E QDF VSSNS+RNSAFL        RISN  L STSN S
Sbjct: 1   MLILAGLQTCKYLCVPNSSFESQDFLVSSNSVRNSAFLAVPRLPVQRISNSNLCSTSNCS 60

Query: 62  NNCDKSKKLSLRRRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPI 121
           +NC++SKKL+ RRRSSV+ CSRN+IFDN SSTQLP+KP  D IQ IDEIGLLNKPSPAPI
Sbjct: 61  DNCNESKKLTFRRRSSVLLCSRNDIFDNLSSTQLPDKPLVDGIQEIDEIGLLNKPSPAPI 120

Query: 122 NNGVSSEFDEEVENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKA 181
           +NGVSSE DEEVENPDENEALAPFMKFFKN D+ +E+EEE+KA+RAFEEKIDGD+E   A
Sbjct: 121 SNGVSSEIDEEVENPDENEALAPFMKFFKNKDSADEKEEEDKALRAFEEKIDGDDETEIA 180

Query: 182 NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDL 241
           NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKE+EFLMCDL
Sbjct: 181 NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEMEFLMCDL 240

Query: 242 DKDAESFMMNGKMGLVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLF 301
           DKDAESFMMNGKMGLVKY+DA SRG GPGRPVVE GTVLFAEVLGRTLSGRPLLSTRRLF
Sbjct: 241 DKDAESFMMNGKMGLVKYEDAFSRGQGPGRPVVENGTVLFAEVLGRTLSGRPLLSTRRLF 300

Query: 302 RRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 361
           RRLAWHRVRQIK LDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV
Sbjct: 301 RRLAWHRVRQIKGLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 360

Query: 362 GRRIFVQIMRIDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 421
           GRRIFVQI RIDEAKNDLILSE+QAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG
Sbjct: 361 GRRIFVQITRIDEAKNDLILSEKQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 420

Query: 422 LLHVSNITRARVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVF 481
           LLHVSNITRARVTSVSDLL VGEKVKVLVVKSMFPDKISLSIADLESEPGLFI+NKEKVF
Sbjct: 421 LLHVSNITRARVTSVSDLLTVGEKVKVLVVKSMFPDKISLSIADLESEPGLFITNKEKVF 480

Query: 482 SEAKIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           SEAKIMAKKYRQRLP ++G  R + APTTDLPFENESSMYANWKWFKFER
Sbjct: 481 SEAKIMAKKYRQRLPALDGIPRLDTAPTTDLPFENESSMYANWKWFKFER 530

[Close]
BLAST of CmoCh15G005780 vs. NCBI nr
Match: gi|449446381|ref|XP_004140950.1| (PREDICTED: uncharacterized protein LOC101219804 [Cucumis sativus])

HSP 1 Score: 886.3 bits (2289), Expect = 2.5e-254
Identity = 461/530 (86.98%), Postives = 486/530 (91.70%), Query Frame = 1 

Query: 2   MLILAGLQPCKCLCALNSSSEPQDFSVSSNSLRNSAFLT------PRISNFKLYSTSNWS 61
           M+ILAGLQPCK LC  NSS E QDF VSSNS+RNSAFL        RISN  L STS  S
Sbjct: 1   MVILAGLQPCKYLCVPNSSFESQDFLVSSNSVRNSAFLAVPRLPVQRISNSNLCSTSTCS 60

Query: 62  NNCDKSKKLSLRRRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPI 121
           +NC+KSKKL+ RRRSSV+FCSRN+IFDN SSTQLP+KP  D IQ IDEIGLLNKPSPAPI
Sbjct: 61  DNCNKSKKLTFRRRSSVLFCSRNDIFDNLSSTQLPDKPRVDGIQEIDEIGLLNKPSPAPI 120

Query: 122 NNGVSSEFDEEVENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKA 181
           +NGVSSE D+EVENPDENEALAPFMKFFKN D+ +E+EEEE+A+RAFEE IDGD+E   A
Sbjct: 121 SNGVSSEIDQEVENPDENEALAPFMKFFKNKDSADEKEEEERALRAFEETIDGDDETEIA 180

Query: 182 NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDL 241
           NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKE+E L CDL
Sbjct: 181 NKLNVEYYEPKPGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEMESLTCDL 240

Query: 242 DKDAESFMMNGKMGLVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLF 301
           DKDAESFMMNGKMGLVKY+DA SRG GPGRPVVE GTVLFAEVLGRTLSGRPLLSTRRLF
Sbjct: 241 DKDAESFMMNGKMGLVKYEDAFSRGQGPGRPVVENGTVLFAEVLGRTLSGRPLLSTRRLF 300

Query: 302 RRLAWHRVRQIKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 361
           RRLAWHRVRQIK LDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV
Sbjct: 301 RRLAWHRVRQIKGLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENV 360

Query: 362 GRRIFVQIMRIDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 421
           GRRIFVQI R+DEAKNDLILSE+QAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG
Sbjct: 361 GRRIFVQITRMDEAKNDLILSEKQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSG 420

Query: 422 LLHVSNITRARVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVF 481
           LLHVSNITRARVTSVSDLL+VGEKV VLVVKSMFPDKISLSIADLESEPGLFI+NKEKVF
Sbjct: 421 LLHVSNITRARVTSVSDLLSVGEKVNVLVVKSMFPDKISLSIADLESEPGLFITNKEKVF 480

Query: 482 SEAKIMAKKYRQRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           SEAKIMAKKYRQRLP ++G  RP+ APTTDLPFENESSMYANWKWFKFER
Sbjct: 481 SEAKIMAKKYRQRLPSLDGILRPKTAPTTDLPFENESSMYANWKWFKFER 530

[Close]
BLAST of CmoCh15G005780 vs. NCBI nr
Match: gi|567883961|ref|XP_006434539.1| (hypothetical protein CICLE_v10000894mg [Citrus clementina])

HSP 1 Score: 658.3 bits (1697), Expect = 1.1e-185
Identity = 345/520 (66.35%), Postives = 413/520 (79.42%), Query Frame = 1 

Query: 8   LQPCKCLCALNSSSEPQDFSVSSNSLRNSAFLTPRISNFKLYSTSNWSNNCDKSKKLSLR 67
           +QPCK       +S P   + S     N+ +  P+  NF  ++ S               
Sbjct: 5   VQPCKSFTFTLLNSAPPLSTCSFVQNGNTKYPLPQTRNFHSFAAS-----------FRFL 64

Query: 68  RRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVSSEFDEEV 127
           R + +VFCS+ ++FD+ SS Q P     + ++G +E+ LLNKP+  PI+NGV+SE D++ 
Sbjct: 65  RSTHIVFCSQKDVFDDLSSAQFPENVENEGLEGNEELELLNKPNLVPISNGVASEVDKKS 124

Query: 128 ENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKP 187
           E PDE EALAPF+KFFK  D+ EE EEE   V    E I  D+++ + +K++VEYYEPKP
Sbjct: 125 EKPDEEEALAPFLKFFKPRDSAEEVEEEGSEVGVSRESIGVDDKVGE-DKVSVEYYEPKP 184

Query: 188 GDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGK 247
           GD V+GVVVSGNENKLD+NVGADLLGTMLTKEVLPLYDKE++FL+CDL KDAE FM+ GK
Sbjct: 185 GDFVIGVVVSGNENKLDVNVGADLLGTMLTKEVLPLYDKEMDFLLCDLKKDAEEFMVRGK 244

Query: 248 MGLVKYDDAV--SRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQ 307
           MG+VK DDA+  S G GPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFR++AWHRVRQ
Sbjct: 245 MGIVKDDDAIAMSGGSGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRKMAWHRVRQ 304

Query: 308 IKRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMR 367
           IK+L+EPIEVK +EWNTGGLLTRIEGLRAFLPKAELL+RVNNFTELKE VGRR++VQI R
Sbjct: 305 IKQLNEPIEVKFTEWNTGGLLTRIEGLRAFLPKAELLSRVNNFTELKEKVGRRMYVQITR 364

Query: 368 IDEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRA 427
           I+E  NDLILSER+AW TL LREGTLLEGTVKKI+PYGAQIRIGD+NRSGLLH+SN++R 
Sbjct: 365 INEDTNDLILSEREAWATLNLREGTLLEGTVKKIYPYGAQIRIGDSNRSGLLHISNMSRT 424

Query: 428 RVTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEAKIMAKKY 487
           RVTSVSDLL  GE+VKVLVVKSMFPDKISLSIADLESEPGLF+S+KE+VFSEA+ MAKKY
Sbjct: 425 RVTSVSDLLNEGERVKVLVVKSMFPDKISLSIADLESEPGLFVSDKERVFSEAEEMAKKY 484

Query: 488 RQRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           RQ+LP V    + E  PT  LPF++E+SM ANWKWF+FE+
Sbjct: 485 RQKLPAVSVSPKSESLPTDTLPFDSEASMCANWKWFRFEQ 512

[Close]
BLAST of CmoCh15G005780 vs. NCBI nr
Match: gi|568838281|ref|XP_006473143.1| (PREDICTED: uncharacterized protein LOC102610673 [Citrus sinensis])

HSP 1 Score: 654.1 bits (1686), Expect = 2.1e-184
Identity = 345/503 (68.59%), Postives = 407/503 (80.91%), Query Frame = 1 

Query: 32  SLRNSAFLTPRISNFKLYSTSNWSNNCDKSKKL-----SLR--RRSSVVFCSRNEIFDNF 91
           +L NSA   P +S        N      +S+K      S R  R + +VFCS+ ++FD+ 
Sbjct: 14  TLLNSA---PPLSTCSFVQNGNAKYPLQQSRKFHSFAASFRFLRSTHIVFCSQKDVFDDL 73

Query: 92  SSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVSSEFDEEVENPDENEALAPFMKFFK 151
           SSTQ P     +  +G +E+ LLNKP+  PI+NG++SE D++ E PDE EALAPF+KFFK
Sbjct: 74  SSTQFPENVENEGFEGNEELELLNKPNLVPISNGIASEVDKKFEKPDEEEALAPFLKFFK 133

Query: 152 NTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPKPGDVVVGVVVSGNENKLD 211
             D+ EE EEEE  V    E ID D++ V+ +K++VEYYEPKPGD V+GVVVSGNENKLD
Sbjct: 134 PRDSAEEVEEEESEVGVSRESIDVDDK-VEEDKVSVEYYEPKPGDFVIGVVVSGNENKLD 193

Query: 212 INVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNGKMGLVKYDDAV--SRGLG 271
           +NV ADLLGTMLTKEVLPLYDKE++FL+CDL KDAE FM+ GKMG+VK DDA+  S G G
Sbjct: 194 VNVAADLLGTMLTKEVLPLYDKEMDFLLCDLKKDAEEFMVRGKMGIVKDDDAIAMSGGSG 253

Query: 272 PGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQIKRLDEPIEVKISEWNT 331
           PGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFR++AWHRVRQIK+L EPIEVK +EWNT
Sbjct: 254 PGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRKMAWHRVRQIKQLHEPIEVKFTEWNT 313

Query: 332 GGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRIDEAKNDLILSERQAWE 391
           GGLLTRIEGLRAFLPKAELL+RVNNFTELKE VGRR++VQI RI+E  NDLILSER+AW 
Sbjct: 314 GGLLTRIEGLRAFLPKAELLSRVNNFTELKEKVGRRMYVQITRINEDTNDLILSEREAWA 373

Query: 392 TLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRARVTSVSDLLAVGEKVKV 451
           TL LREGTLLEGTVKKI+PYGAQIRIGD+NRSGLLH+SN++R RVTSVSDLL  GE+VKV
Sbjct: 374 TLNLREGTLLEGTVKKIYPYGAQIRIGDSNRSGLLHISNMSRTRVTSVSDLLNEGERVKV 433

Query: 452 LVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEAKIMAKKYRQRLPVVEGFTRPEPAP 511
           LVVKSMFPDKISLSIADLESEPGLF+S+KE+VFSEA+ MAKKYRQ+LP V    + E  P
Sbjct: 434 LVVKSMFPDKISLSIADLESEPGLFVSDKERVFSEAEEMAKKYRQKLPAVSVSPKSESLP 493

Query: 512 TTDLPFENESSMYANWKWFKFER 526
           T   PF++E+SM ANWKWF+FE+
Sbjct: 494 TDTPPFDSEASMCANWKWFRFEQ 512

[Close]
BLAST of CmoCh15G005780 vs. NCBI nr
Match: gi|1000950405|ref|XP_015579628.1| (PREDICTED: uncharacterized protein LOC8281436 isoform X1 [Ricinus communis])

HSP 1 Score: 652.5 bits (1682), Expect = 6.2e-184
Identity = 344/519 (66.28%), Postives = 416/519 (80.15%), Query Frame = 1 

Query: 9   QPCKCLCALNSSS--EPQDFSVSSNSLRNSAFLTPRISNFKLYSTSNWSNNCDKSKKLSL 68
           QPCK L   N S      +F VS NS  ++       S+F+L+S+     +   SK   L
Sbjct: 6   QPCKSLSFQNISLPLNTNNFIVSCNSSVHAKCF--HSSSFQLFSSIGLLKSLSFSKNSPL 65

Query: 69  RRRSSVVFCSRNEIFDNFSSTQLPNKPSEDEIQGIDEIGLLNKPSPAPINNGVSSEFDEE 128
            R + + FCS+N+ FDN SSTQ+P +  ED I+  +E+ LLNKPSP  INNG+S E D+E
Sbjct: 66  WRSTQISFCSQNDTFDNLSSTQVPEEQEEDRIRENEELELLNKPSPVVINNGLSIEVDKE 125

Query: 129 VENPDENEALAPFMKFFKNTDAVEEEEEEEKAVRAFEEKIDGDEEIVKANKLNVEYYEPK 188
            E  D++EALAPF+KFF+  D++EE +EE K +   E   +G+ E  +A K+NV+YYEPK
Sbjct: 126 SETIDKDEALAPFLKFFEPRDSLEEIKEEGKELGVIEGNSNGNNEDKEAKKVNVDYYEPK 185

Query: 189 PGDVVVGVVVSGNENKLDINVGADLLGTMLTKEVLPLYDKEVEFLMCDLDKDAESFMMNG 248
           PGD VVGVVVSGNE+KLD+NVGADLLGTMLTKEVLPLYDKE+E+L+CD++KDAE FM+ G
Sbjct: 186 PGDFVVGVVVSGNESKLDVNVGADLLGTMLTKEVLPLYDKEMEYLLCDMEKDAERFMVRG 245

Query: 249 KMGLVKYDDAVSRGLGPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRLFRRLAWHRVRQI 308
           K+G++K + A+S G G GRPVVETGT+LFAEVLGRTLSGRPLLSTRRLFRR+AWHRVRQI
Sbjct: 246 KIGIIKDEAAMSGGPGLGRPVVETGTILFAEVLGRTLSGRPLLSTRRLFRRIAWHRVRQI 305

Query: 309 KRLDEPIEVKISEWNTGGLLTRIEGLRAFLPKAELLNRVNNFTELKENVGRRIFVQIMRI 368
           K L+EPIEV+I+EWNTGGLLTRIEGLRAFLPKAEL+NRV NF ELKENV RRI V I RI
Sbjct: 306 KELNEPIEVRITEWNTGGLLTRIEGLRAFLPKAELMNRVKNFKELKENVSRRINVLITRI 365

Query: 369 DEAKNDLILSERQAWETLYLREGTLLEGTVKKIFPYGAQIRIGDTNRSGLLHVSNITRAR 428
           +E  N+LILSER+AWE L LREGTLLEG V+KIFPYGAQ+RIG+TNRSGLLH+SNITR+R
Sbjct: 366 NEDNNELILSEREAWEMLNLREGTLLEGNVRKIFPYGAQVRIGETNRSGLLHISNITRSR 425

Query: 429 VTSVSDLLAVGEKVKVLVVKSMFPDKISLSIADLESEPGLFISNKEKVFSEAKIMAKKYR 488
           VT+VSDLL V E+VKVLVVKSMFPDKISLSIADLESEPGLF+SNKEKVF+EA+ MAKKYR
Sbjct: 426 VTAVSDLLKVDERVKVLVVKSMFPDKISLSIADLESEPGLFVSNKEKVFAEAEEMAKKYR 485

Query: 489 QRLPVVEGFTRPEPAPTTDLPFENESSMYANWKWFKFER 526
           Q+LP V    +     ++ L F++E++MYANWKWFKFER
Sbjct: 486 QKLPAVLATRKSATPLSSTLTFDDEATMYANWKWFKFER 522

The following BLAST results are available for this feature:
BLAST of CmoCh15G005780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RR1_SPIOL4.1e-2633.9130S ribosomal protein S1, chloroplastic OS=Spinacia oleracea GN=RPS1 PE=1 SV=1[more]
RS1_SYNP64.1e-2637.1430S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA... [more]
RPS1_ARATH1.2e-2534.3530S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana GN=RPS1 PE=1 SV=... [more]
RS1A_SYNY32.0e-2529.5930S ribosomal protein S1 homolog A OS=Synechocystis sp. (strain PCC 6803 / Kazus... [more]
RS1_SYNE75.7e-2030.1430S ribosomal protein S1 OS=Synechococcus elongatus (strain PCC 7942) GN=rpsA PE... [more]
BLAST of CmoCh15G005780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9H0_CUCSA1.8e-25486.98Uncharacterized protein OS=Cucumis sativus GN=Csa_6G053320 PE=4 SV=1[more]
V4V6U6_9ROSI7.9e-18666.35Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000894mg PE=4 SV=1[more]
A0A067GYS4_CITSI5.6e-18468.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010232mg PE=4 SV=1[more]
F6HJE6_VITVI4.5e-18166.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g02600 PE=4 SV=... [more]
B9SM67_RICCO2.2e-18071.05Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0296330 PE=4 SV=1[more]
BLAST of CmoCh15G005780 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G71720.11.6e-15056.20 Nucleic acid-binding proteins superfamily[more]
AT5G30510.16.7e-2734.35 ribosomal protein S1[more]
AT3G23700.11.0e-1130.56 Nucleic acid-binding proteins superfamily[more]
BLAST of CmoCh15G005780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113732|ref|XP_008456726.1|7.9e-25687.74PREDICTED: uncharacterized protein LOC103496585 [Cucumis melo][more]
gi|449446381|ref|XP_004140950.1|2.5e-25486.98PREDICTED: uncharacterized protein LOC101219804 [Cucumis sativus][more]
gi|567883961|ref|XP_006434539.1|1.1e-18566.35hypothetical protein CICLE_v10000894mg [Citrus clementina][more]
gi|568838281|ref|XP_006473143.1|2.1e-18468.59PREDICTED: uncharacterized protein LOC102610673 [Citrus sinensis][more]
gi|1000950405|ref|XP_015579628.1|6.2e-18466.28PREDICTED: uncharacterized protein LOC8281436 isoform X1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain
IPR012340NA-bd_OB-fold
IPR022967S1_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G005780.1CmoCh15G005780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003029S1 domainPFAMPF00575S1coord: 386..447
score: 5.
IPR003029S1 domainPROFILEPS50126S1coord: 310..378
score: 11.674coord: 389..458
score: 15
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 309..379
score: 8.6E-7coord: 386..462
score: 4.9
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 310..384
score: 2.79E-7coord: 387..468
score: 5.59
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 308..378
score: 0.0028coord: 387..458
score: 2.7
NoneNo IPR availableunknownCoilCoilcoord: 145..165
scor
NoneNo IPR availablePANTHERPTHR15838FAMILY NOT NAMEDcoord: 20..490
score: 6.3E
NoneNo IPR availablePANTHERPTHR15838:SF1NUCLEOLAR PROTEIN OF 40 KDAcoord: 20..490
score: 6.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G005780Cucsa.363980Cucumber (Gy14) v1cgycmoB0996
CmoCh15G005780CmaCh15G005700Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G005780CmaCh04G024650Cucurbita maxima (Rimu)cmacmoB693
CmoCh15G005780Cla013791Watermelon (97103) v1cmowmB249
CmoCh15G005780Csa6G053320Cucumber (Chinese Long) v2cmocuB297
CmoCh15G005780MELO3C019971Melon (DHL92) v3.5.1cmomeB262
CmoCh15G005780ClCG08G007280Watermelon (Charleston Gray)cmowcgB264
CmoCh15G005780CSPI06G04600Wild cucumber (PI 183967)cmocpiB306
CmoCh15G005780Lsi08G005820Bottle gourd (USVL1VR-Ls)cmolsiB282
CmoCh15G005780Cp4.1LG13g10850Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G005780Cp4.1LG01g21410Cucurbita pepo (Zucchini)cmocpeB280
CmoCh15G005780MELO3C019971.2Melon (DHL92) v3.6.1cmomedB297
CmoCh15G005780CsaV3_6G004950Cucumber (Chinese Long) v3cmocucB0359
CmoCh15G005780Cla97C08G149980Watermelon (97103) v2cmowmbB301
CmoCh15G005780Bhi04G001249Wax gourdcmowgoB0393
CmoCh15G005780CsGy6G004580Cucumber (Gy14) v2cgybcmoB721
CmoCh15G005780Carg01625Silver-seed gourdcarcmoB1118
CmoCh15G005780Carg15809Silver-seed gourdcarcmoB0092
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh15G005780CmoCh04G025810Cucurbita moschata (Rifu)cmocmoB262
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G005780Watermelon (97103) v2cmowmbB300
CmoCh15G005780Watermelon (97103) v2cmowmbB302
CmoCh15G005780Watermelon (Charleston Gray)cmowcgB263
CmoCh15G005780Watermelon (Charleston Gray)cmowcgB265
CmoCh15G005780Watermelon (97103) v1cmowmB248
CmoCh15G005780Watermelon (97103) v1cmowmB250