CmoCh15G005700 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G005700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3
Location	Cmo_Chr15 : 2721299 .. 2724886 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCTGCACCAGAAGACGCCATTTACGGGGTCGGAGCTCGGGGCGGTGCCGCAAATGACGGCATTCCAATCATGGGTCGAAGGGGACCGCGAATAAGATGCCACAGAAGTCGAGAAGCTTAGATATGGATTTTTAATTATATATATTAAAATTAATTATATGTATAGGAGAGATATAGATTTTCAATATATATATTTAAAATTAAAATATACGGAGCTCCCAAGATAGAAAATAAATTTAGAAATAAACGAAAGTCTCAAAGACTAATTTAAAGAATGATCTTAATTTATAATCAAAGAATACATCAAAATATACTATGAATGATTATGGGTTTTTATAATAATGAAAGAATACTCTTTTCTTTGTGATCCTGAATAATTAAGGGTCTATAATCAAATAATACTTTTTCTATTGTGTGACTTTTTGAATAAAGGTAAATGATCATGGGTTTGATTAAGCATTTATAATAAAAAAAAATACTCATCAATTGTGTGACCTTTTCTTTTGAATAAAAAGTGAATGATCATAGGTTTGTGCGACCTTTTTGTTTGGGTTGAATAAAGGTGAATGATTATAATCAAGGTGGGTTGAATAAAGGTGAATGATTATAATCAAAGAATACTGTTTGCTTGGGTGTGACATTTTTTTTTTTGGGTTATGAGAGCTTTAGGCACTACGTCATATCATTAGAGAGTGGATAGCTATTGTGACGTCATATCACATCATTGTAGAGAGTCATGTTCATATACGGACATAATATCATCTAGTATCAGACATAAGCATCTTACACTATTTATAATCAATAATCAAATAATACACTCAATAAACTATATACAAATTATTTATAAATAAAATATATCATTAAATTATCAAGAAAAGATTATAATAATTCCTGAAATTCTTTCAATTAAAATAATTTTTAGGAAAATTTAAGAAAATATACACGTAGATTAGGACGATCTGGGGTGGGACCCACTGGATGGGAAATATTAAATAAAAATTTAGAACTGGGCTTGGAGGGGTGCGCCAGGCCCATGCTATAGTGCAACGCATGGGCAACGCTCAAAGGCCCGAGTAGCAAGCTACTCGAATGGGCCTTTCCCCATAAAAAATTAATTTAATATCATGTGGGCCGATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTTGAAATGTTTACTTGGTCGCCTTTTATAGTGGCATTTGGTTCAGTCCGCCTAGAATATTTCCGATGTGGGACAAACATCTAAGCTCTACTGTGTCAATTTAAACAAAATTTTAATTTTTATAATCAATTATGATTGAAAAAATACTTTTATTAAAACACTTATTATTCACAAATATAATATAATTTTTGCAATATAAATTTAGAAATCTCGTCATTTATCCTTTACTTCGGTGAACCGCCATTTCATTGTTTTTATCCCATGGCTTTGTCTTTGTTCTTTATTTCTTCCCCTGAAACGATTCGATTAGCTGCCAAATACGATTCAAGGACGTTGCGGTTGCGGTTCCGTTCATCGAGTTCCAAATATGAGGTATTGTGCGGCTGTAATTTCTCTAGCTTCTTGATTCTTTTCTTTGCTTGTTCTATATACAATGATGAGGAATCGGCGGTGTTTGTTAGTTGGAGTGAGGCGGTGAGCTTCTGTATCTGTTTGATTGATTGAAAAGTTGATAGAAATTGAGATGAATTTAGAAGGCGAAGTTCGATTGTTGGAGTTGCGTGTTATTGTGACTGTTTGATGCATTTTGAGACGCGATTGTACTTGAAAATTGAGTTTCGCTTATTTGCGATCATGAAGTAACTAGAAGCTGGATGCAGGACTTGAATAATCCTTTTCTGTCGATAAACTCATACTCGATGTTTAAGAAATTTCAGTCACTCGTAAAATGCGAAAATGGCGGCTTCTTCTTGCTGATTGCAATGGTTCGTGTACAATTCAGATCAGATTCCTGTTCATGACGGTGTACCGTTTTACGTATGGATCTGTTGTTGGTCCGTTAAACTTGCATATAGTGCTACTAATTGTTGACTTTCTTAGACTGTTAAAGTTTAAACTTGTAGCTTATCTTAATTTCAGAGGTTGCAATATGATAGTTATCTCCTTTCGTCTTTGAATGGTAATTTTAAGTCATGCAAACGCAGTAATCAATCCTGTTCATCTTCGATCTTTCTTCTTGCGTTCACGAAGCCTTTATTTTCTCCAATTATATAGGTTTAGATGCAATGTCAAGTTTCATTTTATCTGACTACTTGTTTCTTCATCAAACTTACAGCCGACACCCTACCTTAAGATGGGCACAAACATCGGACAGGCTATTCCTAACAATTGACATCCCTGATGCCCAGGATGTGAAGCTTAAGTTGGAGCCTGAAGGGAAATTTTTCTTTTCTGCAGTTGGTGGAGCAGAGAAGATTCCATATGAAATCGACATTGATCTCTACGATAAAGTTGACATAAATGTAAAATCACTTCTCTTTTTTGCTTTGTACCCATCATTTTTTGTTCTACTGTTAGATATTAAGGCACTAATTGTTGAAACGCGATGATGGCAGGAGAGTAAGGCTAGTGTTGGCATGAGAAACATCAGATATATGATAGAAAAGGCTGAAAAGAAGTGGTGGAGCAGATTGCTGAAGCAAGAAGGGAAACCTCCTGTGTTTGTGAAAGTTGATTGGGACAAATGGATTGAAGAAGATGAAGAAAATGAAAATAAGTGTGAGTTTTCTTTAAGCCTATTTTCCCATTTTTCTGTTGGCAAGTTTTTGTTGAAGAGGCTTTCTTACCCCGTCATTCTAATGCGCAGCTGGCAATGATATGGATTTCAGCAACATGGACTTTTCGGTAAGTTCAATTATTGTTCGTGTTATATAAGAGCTAAAACACTATTTGATTTTTTGGATTGTTTCATAATGGTGTTGTGCCCGAATCTACTGACAATTTTCTAATCGTATTTTATCTCTAGAAACTTGGTATAGGTGCTGGTGAAGGCATGGGTGCTGATGCATTTGGGGAGGATGATGGTCAGTTTGAGAATTCCTGAAATATTTCTAATGTGTTCAAGCAGGCATTAACTTTTTCTTTTTGCATCTGCGCAGAAGACGACAACGACATCGACAATGAGGGTGATGATAAAGAAGGGGTAGAACTCGATCGAGCACCTCTTGCAGAGCCTGTTAAAGAGCCTGGTTCTACGAGTAGCAAACCTGATGCTAAAGCTTGAGTTGGTAACTCTGCTTAGTTTAAGGTAAATGCTGTGCTAATATCCTGCTTCCGGAGGTGTGGGCATAATGAGGGCATGACATGACATCCTAGGGACTTAGGAGTGTTCATATTTTGATTGCATTTAGCTTTAAGAATATTTTCTCCTGGAATCTCTCTGCATTTAGTTTTTGGATCGCAATGCGTTGTGGTTTGTTTTCTTTATTCCGCCTTTACGGATCAAACAACTGAGCAAACTCGTGCGTGCTTAATTGTTTCTTTTATCTTATGGTTGAACACAAATATGAATACATATTAGCCAAACTCCTAA

mRNA sequence

ATGGCCCTGCACCAGAAGACGCCATTTACGGGGTCGGAGCTCGGGGCGGTGCCGCAAATGACGGCATTCCAATCATGGCTGCCAAATACGATTCAAGGACGTTGCGGTTGCGGTTCCGTTCATCGAGTTCCAAATATGAGCCGACACCCTACCTTAAGATGGGCACAAACATCGGACAGGCTATTCCTAACAATTGACATCCCTGATGCCCAGGATGTGAAGCTTAAGTTGGAGCCTGAAGGGAAATTTTTCTTTTCTGCAGTTGGTGGAGCAGAGAAGATTCCATATGAAATCGACATTGATCTCTACGATAAAGTTGACATAAATGAGAGTAAGGCTAGTGTTGGCATGAGAAACATCAGATATATGATAGAAAAGGCTGAAAAGAAGTGGTGGAGCAGATTGCTGAAGCAAGAAGGGAAACCTCCTGTGTTTGTGAAAGTTGATTGGGACAAATGGATTGAAGAAGATGAAGAAAATGAAAATAAGTCTGGCAATGATATGGATTTCAGCAACATGGACTTTTCGAAACTTGGTATAGGTGCTGGTGAAGGCATGGGTGCTGATGCATTTGGGGAGGATGATGAAGACGACAACGACATCGACAATGAGGGTGATGATAAAGAAGGGGTAGAACTCGATCGAGCACCTCTTGCAGAGCCTGTTAAAGAGCCTGGTTCTACGAGTAGCAAACCTGATGCTAAAGCTTGAGTTGGTAACTCTGCTTAGTTTAAGGTAAATGCTGTGCTAATATCCTGCTTCCGGAGGTGTGGGCATAATGAGGGCATGACATGACATCCTAGGGACTTAGGAGTGTTCATATTTTGATTGCATTTAGCTTTAAGAATATTTTCTCCTGGAATCTCTCTGCATTTAGTTTTTGGATCGCAATGCGTTGTGGTTTGTTTTCTTTATTCCGCCTTTACGGATCAAACAACTGAGCAAACTCGTGCGTGCTTAATTGTTTCTTTTATCTTATGGTTGAACACAAATATGAATACATATTAGCCAAACTCCTAA

Coding sequence (CDS)

ATGGCCCTGCACCAGAAGACGCCATTTACGGGGTCGGAGCTCGGGGCGGTGCCGCAAATGACGGCATTCCAATCATGGCTGCCAAATACGATTCAAGGACGTTGCGGTTGCGGTTCCGTTCATCGAGTTCCAAATATGAGCCGACACCCTACCTTAAGATGGGCACAAACATCGGACAGGCTATTCCTAACAATTGACATCCCTGATGCCCAGGATGTGAAGCTTAAGTTGGAGCCTGAAGGGAAATTTTTCTTTTCTGCAGTTGGTGGAGCAGAGAAGATTCCATATGAAATCGACATTGATCTCTACGATAAAGTTGACATAAATGAGAGTAAGGCTAGTGTTGGCATGAGAAACATCAGATATATGATAGAAAAGGCTGAAAAGAAGTGGTGGAGCAGATTGCTGAAGCAAGAAGGGAAACCTCCTGTGTTTGTGAAAGTTGATTGGGACAAATGGATTGAAGAAGATGAAGAAAATGAAAATAAGTCTGGCAATGATATGGATTTCAGCAACATGGACTTTTCGAAACTTGGTATAGGTGCTGGTGAAGGCATGGGTGCTGATGCATTTGGGGAGGATGATGAAGACGACAACGACATCGACAATGAGGGTGATGATAAAGAAGGGGTAGAACTCGATCGAGCACCTCTTGCAGAGCCTGTTAAAGAGCCTGGTTCTACGAGTAGCAAACCTGATGCTAAAGCTTGA

Homology

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BLAST of CmoCh15G005700 vs. Swiss-Prot
Match: Y8359_ORYSI (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32
Identity = 87/213 (40.85%), Postives = 124/213 (58.22%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHP ++WAQ  D++++T+ + DA+D K+ LEPEG F FSA  G +   YE  ++L DK
Sbjct: 1   MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           V++ ESK SVG+R+I  ++EKAE KWW +L++ + K P FVKVDWDKW++ED++  + + 
Sbjct: 61  VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNV 120

Query: 166 NDMDFSN------------MDFSKLGIGAGEGMGADA-----------FGEDDEDDNDID 225
           + MDFSN            M     G+G   GMG  A            G  DE     +
Sbjct: 121 DGMDFSNFGGMGGMGGMGGMGDMMGGMGGMGGMGGMAEMMGGMGGMGGMGGMDE----FE 180

Query: 226 NEGDDKEGVELDRAPLAEPVKEPGSTSSKPDAK 236
           +E DD+E  E+ +   AE   E G  S + DAK
Sbjct: 181 DESDDEE--EVSKPQDAEKAAEAGK-SQESDAK 206

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BLAST of CmoCh15G005700 vs. Swiss-Prot
Match: Y8359_ORYSJ (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32
Identity = 88/217 (40.55%), Postives = 125/217 (57.60%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHP ++WAQ  D++++T+ + DA+D K+ LEPEG F FSA  G +   YE  ++L DK
Sbjct: 1   MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           V++ ESK SVG+R+I  ++EKAE KWW +L++ + K P FVKVDWDKW++ED++  + + 
Sbjct: 61  VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNV 120

Query: 166 NDMDFSN------------MDFSKLGIGAGEGMGADA--------------FGEDDEDDN 225
           + MDFSN            M     G+G   GMG  A               G  DE   
Sbjct: 121 DGMDFSNFGGMGGMGGMGGMGDMMGGMGGMGGMGGMAEMMGGMGGMGGMGGMGGMDE--- 180

Query: 226 DIDNEGDDKEGVELDRAPLAEPVKEPGSTSSKPDAKA 237
             ++E DD+E  E+ +   AE   E G  S + DAKA
Sbjct: 181 -FEDESDDEE--EVSKPQDAEKAAEAGK-SQESDAKA 210

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BLAST of CmoCh15G005700 vs. Swiss-Prot
Match: Y3377_ARATH (Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29
Identity = 62/131 (47.33%), Postives = 94/131 (71.76%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSR+P + WAQ SD+++LT+ +PDA+D+ +K EP+G F FSA+G A+   +E  ++LY K
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALG-AQGERFEFSLELYGK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEE--NENK 165
           + + E + +VG+RNI + I+K E+ WW+RLLK E KP  ++KVDW+KW +EDEE  +E  
Sbjct: 61  I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETA 120

Query: 166 SGNDMDFSNMD 175
           S ++  F N D
Sbjct: 121 SDDESAFVNQD 129

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BLAST of CmoCh15G005700 vs. Swiss-Prot
Match: DAF41_CAEEL (Co-chaperone protein daf-41 OS=Caenorhabditis elegans GN=daf-41 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.4e-12
Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           M++ PT+ WAQ    ++LTI++ +A+  +LK E     F    G ++   YE  ++ +D+
Sbjct: 1   MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHF---QGSSKTDKYEATLEFFDE 60

Query: 106 VDINESK-ASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKS 165
           +D    K      R +   ++K    WW RLL+ +GK   ++KVD+ KW +EDE++E + 
Sbjct: 61  IDPASVKHTGSSTRVVEITVQKKTPAWWPRLLQNKGKVH-WLKVDFGKWKDEDEDDEAED 120

Query: 166 ---------GNDMDFSNMDFSKLGIGAGEGMGADAFG-EDDEDDNDIDNEGDDKE 210
                     N  D  N   S++G GAG   GAD  G EDDE+D+D+ +  D++E
Sbjct: 121 AGAGIGGGMANGFDL-NQYMSQMG-GAG---GADFGGLEDDEEDDDMPDLEDNEE 166

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BLAST of CmoCh15G005700 vs. Swiss-Prot
Match: WOS2_SCHPO (Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wos2 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.8e-11
Identity = 56/181 (30.94%), Postives = 95/181 (52.49%), Query Frame = 1


Query: 50  PTLRWAQTSDR-------LFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDL 109
           P + WAQ S++       ++LT+ IPDA D K+ L PE K    +  GA    Y + ID 
Sbjct: 8   PEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPE-KLVIDSKSGA-NAHYAVQIDF 67

Query: 110 YDKVDINESKASVGMRNIRYMIEKAE--KKWWSRLLKQEGKPPVFVKVDWDKWIEEDEEN 169
           +  +D+ +SK SV  R I +++ K E  +++W RL K++ +   +++ D+D+W++EDE+ 
Sbjct: 68  FKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLTKEKLRLH-WLRTDFDRWVDEDEQE 127

Query: 170 ENK------SGNDMDFS------NMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDK 210
                    +G   D S       MDFS+ G   G G G DA   + E + + +   ++K
Sbjct: 128 AQPEVSPFGAGGMPDLSALGGMGGMDFSQFGNLGGAGAGEDASDSEPELEEEEEVGSNEK 185

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BLAST of CmoCh15G005700 vs. TrEMBL
Match: A0A0A0K8N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052700 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.7e-84
Identity = 154/191 (80.63%), Postives = 175/191 (91.62%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPTLRWAQTSDRLF+TID+PDAQDVKLKL+PEGKF FSAV G EKIPYE+DIDLYDK
Sbjct: 1   MSRHPTLRWAQTSDRLFITIDLPDAQDVKLKLDPEGKFCFSAVSGTEKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           VDINESKAS+GMRNI Y+IEKAEKKWWSRLLKQEGKPPVFVK+DWDKWI+EDEE  + SG
Sbjct: 61  VDINESKASIGMRNILYLIEKAEKKWWSRLLKQEGKPPVFVKIDWDKWIDEDEEKGDNSG 120

Query: 166 NDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKEP 225
           NDMDFS++DFSKLG+  G GMGADAFGEDDEDDNDID+EG++KEG ++D+ PLA P+ E 
Sbjct: 121 NDMDFSSLDFSKLGLDPGGGMGADAFGEDDEDDNDIDDEGENKEGEKVDQTPLAGPINES 180

Query: 226 GSTSSKPDAKA 237
           GS+S +PDAKA
Sbjct: 181 GSSSKEPDAKA 191

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BLAST of CmoCh15G005700 vs. TrEMBL
Match: C6T5E4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.8e-60
Identity = 110/160 (68.75%), Postives = 139/160 (86.88%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHP+++WAQTSD L+LT+++PDAQDVKLKLEPEGKF+FSA  GAEKIPYE+DIDL+DK
Sbjct: 1   MSRHPSVKWAQTSDVLYLTVELPDAQDVKLKLEPEGKFYFSATAGAEKIPYEVDIDLFDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENK-S 165
           +D+N SKASVG RNI Y+++KAE KWW RLLKQ GK PVF+KVDWDKW++EDEE +NK +
Sbjct: 61  IDVNNSKASVGSRNICYLVKKAENKWWDRLLKQGGKSPVFLKVDWDKWVDEDEEQDNKPA 120

Query: 166 GNDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNE 205
            +DMDF ++DFSKLG+G GEG+ +DA G DD D++D + E
Sbjct: 121 ASDMDFGDIDFSKLGMGGGEGLDSDAAGNDDADESDTEEE 160

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BLAST of CmoCh15G005700 vs. TrEMBL
Match: V4T8J4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002611mg PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 119/191 (62.30%), Postives = 149/191 (78.01%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPT++WAQ +DR+++TID+PDAQDVKLKLEPEGKFFFSA  G +KIPYE+DIDLYDK
Sbjct: 1   MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEE-NENKS 165
           VD+NESKASVG+RNI Y+++KAE KWWSRLLKQ GKPPVF+KVDWDKWI+EDEE  ++K 
Sbjct: 61  VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120

Query: 166 GNDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKE 225
             DMDF ++DFSK+ +G   G+ A+A G D+ D++D + E       E+   P       
Sbjct: 121 PADMDFGDLDFSKMNMG---GLDAEAAGGDENDESDTEEEN------EVGTTPAGNREAP 180

Query: 226 PGSTSSKPDAK 236
           P STSS+PD K
Sbjct: 181 PPSTSSEPDTK 182

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BLAST of CmoCh15G005700 vs. TrEMBL
Match: A0A067H8D0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030007mg PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 119/191 (62.30%), Postives = 149/191 (78.01%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPT++WAQ +DR+++TID+PDAQDVKLKLEPEGKFFFSA  G +KIPYE+DIDLYDK
Sbjct: 1   MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEE-NENKS 165
           VD+NESKASVG+RNI Y+++KAE KWWSRLLKQ GKPPVF+KVDWDKWI+EDEE  ++K 
Sbjct: 61  VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120

Query: 166 GNDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKE 225
             DMDF ++DFSK+ +G   G+ A+A G D+ D++D + E       E+   P       
Sbjct: 121 PADMDFGDLDFSKMNMG---GLDAEAAGGDENDESDTEEEN------EVGTTPAGNREAP 180

Query: 226 PGSTSSKPDAK 236
           P STSS+PD K
Sbjct: 181 PPSTSSEPDTK 182

[Close]

BLAST of CmoCh15G005700 vs. TrEMBL
Match: A0A067GYU2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030007mg PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.1e-60
Identity = 118/190 (62.11%), Postives = 148/190 (77.89%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPT++WAQ +DR+++TID+PDAQDVKLKLEPEGKFFFSA  G +KIPYE+DIDLYDK
Sbjct: 1   MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           VD+NESKASVG+RNI Y+++KAE KWWSRLLKQ GKPPVF+KVDWDKWI+EDEE ++   
Sbjct: 61  VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDK- 120

Query: 166 NDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKEP 225
            DMDF ++DFSK+ +G   G+ A+A G D+ D++D + E       E+   P       P
Sbjct: 121 PDMDFGDLDFSKMNMG---GLDAEAAGGDENDESDTEEEN------EVGTTPAGNREAPP 180

Query: 226 GSTSSKPDAK 236
            STSS+PD K
Sbjct: 181 PSTSSEPDTK 180

[Close]

BLAST of CmoCh15G005700 vs. TAIR10
Match: AT4G02450.1 (AT4G02450.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 5.3e-32
Identity = 67/142 (47.18%), Postives = 101/142 (71.13%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHP ++WA+T++++FLT+ + D +D K+ L+PEG F FSA  G E   YE+ ++L DK
Sbjct: 1   MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           V++ ESK ++G R+I  +IEKAE + W++LL+ + KPP +VKVDWDKW++ED+E  +   
Sbjct: 61  VNVEESKINIGERSIFCIIEKAEPERWNKLLRVK-KPPHYVKVDWDKWVDEDDEG-SAGA 120

Query: 166 NDMDFSNMDFSKLGIGAGEGMG 188
            DMD + M+    G+G   GMG
Sbjct: 121 ADMDMAGME----GMGGMGGMG 136

[Close]

BLAST of CmoCh15G005700 vs. TAIR10
Match: AT3G03773.2 (AT3G03773.2 HSP20-like chaperones superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 61/131 (46.56%), Postives = 93/131 (70.99%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           M R+P + WAQ SD+++LT+ +PDA+D+ +K EP+G F FSA+G A+   +E  ++LY K
Sbjct: 55  MIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALG-AQGERFEFSLELYGK 114

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEE--NENK 165
           + + E + +VG+RNI + I+K E+ WW+RLLK E KP  ++KVDW+KW +EDEE  +E  
Sbjct: 115 I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETA 174

Query: 166 SGNDMDFSNMD 175
           S ++  F N D
Sbjct: 175 SDDESAFVNQD 183

[Close]

BLAST of CmoCh15G005700 vs. NCBI nr
Match: gi|449446367|ref|XP_004140943.1| (PREDICTED: uncharacterized protein At3g03773-like isoform X1 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 2.5e-84
Identity = 154/191 (80.63%), Postives = 175/191 (91.62%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPTLRWAQTSDRLF+TID+PDAQDVKLKL+PEGKF FSAV G EKIPYE+DIDLYDK
Sbjct: 1   MSRHPTLRWAQTSDRLFITIDLPDAQDVKLKLDPEGKFCFSAVSGTEKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           VDINESKAS+GMRNI Y+IEKAEKKWWSRLLKQEGKPPVFVK+DWDKWI+EDEE  + SG
Sbjct: 61  VDINESKASIGMRNILYLIEKAEKKWWSRLLKQEGKPPVFVKIDWDKWIDEDEEKGDNSG 120

Query: 166 NDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKEP 225
           NDMDFS++DFSKLG+  G GMGADAFGEDDEDDNDID+EG++KEG ++D+ PLA P+ E 
Sbjct: 121 NDMDFSSLDFSKLGLDPGGGMGADAFGEDDEDDNDIDDEGENKEGEKVDQTPLAGPINES 180

Query: 226 GSTSSKPDAKA 237
           GS+S +PDAKA
Sbjct: 181 GSSSKEPDAKA 191

[Close]

BLAST of CmoCh15G005700 vs. NCBI nr
Match: gi|778710632|ref|XP_011656606.1| (PREDICTED: uncharacterized protein At3g03773-like isoform X2 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 1.8e-82
Identity = 153/191 (80.10%), Postives = 174/191 (91.10%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPTLRWAQTSDRLF+TID+PDAQDVKLKL+PEGKF FSAV G EKIPYE+DIDLYDK
Sbjct: 1   MSRHPTLRWAQTSDRLFITIDLPDAQDVKLKLDPEGKFCFSAVSGTEKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           VDINESKAS+GMRNI Y+IEKAEKKWWSRLLKQEGKPPVFVK+DWDKWI+EDEE  + SG
Sbjct: 61  VDINESKASIGMRNILYLIEKAEKKWWSRLLKQEGKPPVFVKIDWDKWIDEDEEKGDNSG 120

Query: 166 NDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKEP 225
           NDMDFS++DFSKLG+  G GMGADAFGEDD DDNDID+EG++KEG ++D+ PLA P+ E 
Sbjct: 121 NDMDFSSLDFSKLGLDPGGGMGADAFGEDD-DDNDIDDEGENKEGEKVDQTPLAGPINES 180

Query: 226 GSTSSKPDAKA 237
           GS+S +PDAKA
Sbjct: 181 GSSSKEPDAKA 190

[Close]

BLAST of CmoCh15G005700 vs. NCBI nr
Match: gi|659113676|ref|XP_008456697.1| (PREDICTED: uncharacterized protein At3g03773-like isoform X1 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 5.8e-81
Identity = 154/191 (80.63%), Postives = 172/191 (90.05%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPTLRWAQTS+RLF+TID+PDAQDVKLKLEPEGKF FSAV GAEKIP+E+DIDLYDK
Sbjct: 1   MSRHPTLRWAQTSNRLFITIDLPDAQDVKLKLEPEGKFCFSAVSGAEKIPHEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSG 165
           VDINESKAS+GMRNIRY+IEKAEKKWWSRLLKQEGK PVFVK+DWDKWI+EDEE  + SG
Sbjct: 61  VDINESKASIGMRNIRYLIEKAEKKWWSRLLKQEGKHPVFVKIDWDKWIDEDEEKGDNSG 120

Query: 166 NDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKEP 225
           NDMDFS++DFSKLG+  G G GADAFGEDDEDDNDI++EGDDKEG + D+ PLA PV E 
Sbjct: 121 NDMDFSSLDFSKLGLDPG-GAGADAFGEDDEDDNDINDEGDDKEGEKDDQTPLAGPVNES 180

Query: 226 GSTSSKPDAKA 237
            S+S KPD KA
Sbjct: 181 DSSSRKPDTKA 190

[Close]

BLAST of CmoCh15G005700 vs. NCBI nr
Match: gi|659113678|ref|XP_008456698.1| (PREDICTED: uncharacterized protein At3g03773-like isoform X2 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 6.4e-80
Identity = 152/189 (80.42%), Postives = 170/189 (89.95%), Query Frame = 1


Query: 48  RHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDKVD 107
           RHPTLRWAQTS+RLF+TID+PDAQDVKLKLEPEGKF FSAV GAEKIP+E+DIDLYDKVD
Sbjct: 2   RHPTLRWAQTSNRLFITIDLPDAQDVKLKLEPEGKFCFSAVSGAEKIPHEVDIDLYDKVD 61

Query: 108 INESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEENENKSGND 167
           INESKAS+GMRNIRY+IEKAEKKWWSRLLKQEGK PVFVK+DWDKWI+EDEE  + SGND
Sbjct: 62  INESKASIGMRNIRYLIEKAEKKWWSRLLKQEGKHPVFVKIDWDKWIDEDEEKGDNSGND 121

Query: 168 MDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKEPGS 227
           MDFS++DFSKLG+  G G GADAFGEDDEDDNDI++EGDDKEG + D+ PLA PV E  S
Sbjct: 122 MDFSSLDFSKLGLDPG-GAGADAFGEDDEDDNDINDEGDDKEGEKDDQTPLAGPVNESDS 181

Query: 228 TSSKPDAKA 237
           +S KPD KA
Sbjct: 182 SSRKPDTKA 189

[Close]

BLAST of CmoCh15G005700 vs. NCBI nr
Match: gi|568838309|ref|XP_006473157.1| (PREDICTED: uncharacterized protein OsI_027940-like [Citrus sinensis])

HSP 1 Score: 242.7 bits (618), Expect = 6.6e-61
Identity = 120/191 (62.83%), Postives = 149/191 (78.01%), Query Frame = 1


Query: 46  MSRHPTLRWAQTSDRLFLTIDIPDAQDVKLKLEPEGKFFFSAVGGAEKIPYEIDIDLYDK 105
           MSRHPT++WAQ +DR+++TID+PDAQDVKLKLEPEGKFFFSA+ G +KIPYE+DIDLYDK
Sbjct: 1   MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSAISGPDKIPYEVDIDLYDK 60

Query: 106 VDINESKASVGMRNIRYMIEKAEKKWWSRLLKQEGKPPVFVKVDWDKWIEEDEE-NENKS 165
           VD+NESKASVG+RNI Y+++KAE KWWSRLLKQ GKPPVF+KVDWDKWI+EDEE  +NK 
Sbjct: 61  VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDNKP 120

Query: 166 GNDMDFSNMDFSKLGIGAGEGMGADAFGEDDEDDNDIDNEGDDKEGVELDRAPLAEPVKE 225
             DMDF ++DFSK+ +G   G  A+A G D+ D++D + E       E+   P       
Sbjct: 121 PADMDFGDLDFSKMNMG---GFDAEAAGGDENDESDTEEEN------EVGATPAGNREAP 180

Query: 226 PGSTSSKPDAK 236
           P STSS+PD K
Sbjct: 181 PPSTSSEPDTK 182

The following BLAST results are available for this feature:

BLAST of CmoCh15G005700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y8359_ORYSI	1.0e-32	40.85	Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 P...	[more]
Y8359_ORYSJ	1.0e-32	40.55	Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g035...	[more]
Y3377_ARATH	1.8e-29	47.33	Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1	[more]
DAF41_CAEEL	7.4e-12	33.14	Co-chaperone protein daf-41 OS=Caenorhabditis elegans GN=daf-41 PE=2 SV=1	[more]
WOS2_SCHPO	4.8e-11	30.94	Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wos2 PE=2...	[more]

BLAST of CmoCh15G005700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8N2_CUCSA	1.7e-84	80.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G052700 PE=4 SV=1	[more]
C6T5E4_SOYBN	1.8e-60	68.75	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
V4T8J4_9ROSI	2.3e-60	62.30	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002611mg PE=4 SV=1	[more]
A0A067H8D0_CITSI	2.3e-60	62.30	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030007mg PE=4 SV=1	[more]
A0A067GYU2_CITSI	5.1e-60	62.11	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030007mg PE=4 SV=1	[more]

BLAST of CmoCh15G005700 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02450.1	5.3e-32	47.18	HSP20-like chaperones superfamily protein	[more]
AT3G03773.2	4.9e-30	46.56	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh15G005700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446367\|ref\|XP_004140943.1\|	2.5e-84	80.63	PREDICTED: uncharacterized protein At3g03773-like isoform X1 [Cucumis sativus]	[more]
gi\|778710632\|ref\|XP_011656606.1\|	1.8e-82	80.10	PREDICTED: uncharacterized protein At3g03773-like isoform X2 [Cucumis sativus]	[more]
gi\|659113676\|ref\|XP_008456697.1\|	5.8e-81	80.63	PREDICTED: uncharacterized protein At3g03773-like isoform X1 [Cucumis melo]	[more]
gi\|659113678\|ref\|XP_008456698.1\|	6.4e-80	80.42	PREDICTED: uncharacterized protein At3g03773-like isoform X2 [Cucumis melo]	[more]
gi\|568838309\|ref\|XP_006473157.1\|	6.6e-61	62.83	PREDICTED: uncharacterized protein OsI_027940-like [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G005700.1	CmoCh15G005700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 52..126 score: 6.
IPR007052	CS domain	PROFILE	PS51203	CS	coord: 47..136 score: 15
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 48..169 score: 1.0
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 46..186 score: 2.27
None	No IPR available	PANTHER	PTHR22932	TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE	coord: 45..209 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G005700	Cucsa.364110	Cucumber (Gy14) v1	cgycmoB0996
CmoCh15G005700	CmaCh15G005610	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G005700	Cla013805	Watermelon (97103) v1	cmowmB249
CmoCh15G005700	Csa6G052700	Cucumber (Chinese Long) v2	cmocuB297
CmoCh15G005700	MELO3C019955	Melon (DHL92) v3.5.1	cmomeB262
CmoCh15G005700	ClCG08G007140	Watermelon (Charleston Gray)	cmowcgB264
CmoCh15G005700	CSPI06G04470	Wild cucumber (PI 183967)	cmocpiB306
CmoCh15G005700	Lsi08G005940	Bottle gourd (USVL1VR-Ls)	cmolsiB282
CmoCh15G005700	Cp4.1LG13g10690	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G005700	MELO3C019955.2	Melon (DHL92) v3.6.1	cmomedB297
CmoCh15G005700	CsaV3_6G004820	Cucumber (Chinese Long) v3	cmocucB0359
CmoCh15G005700	Cla97C08G149830	Watermelon (97103) v2	cmowmbB301
CmoCh15G005700	Bhi04G001263	Wax gourd	cmowgoB0393
CmoCh15G005700	CsGy6G004450	Cucumber (Gy14) v2	cgybcmoB721
CmoCh15G005700	Carg01632	Silver-seed gourd	carcmoB1118

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G005700	Watermelon (97103) v2	cmowmbB300
CmoCh15G005700	Cucurbita moschata (Rifu)	cmocmoB262
CmoCh15G005700	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G005700	Watermelon (Charleston Gray)	cmowcgB263
CmoCh15G005700	Watermelon (97103) v1	cmowmB248
CmoCh15G005700	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G005700	Silver-seed gourd	carcmoB0092