CmoCh15G005320 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGACGAACAAAGGCTCTAGAGCGAGAAAGAGAGAGGGAAAGAAAAGAGGAGTGAGAAAAAAAGCTCTTCTTCTTCTTCCTGCTGCTGCTATTCCTGTTCTTCTTCCTCTTCCTTCTCCCTCTCCCTCTTAATTTCTTAGTAATTTCGTTATCAAATCCTCCTCCTCCTCCTCAACCTACCATTGATTTTCCACCTTCTTCACTTCACTGCTCACTGATTACGCCAACCATGGTGTCGGCCAACAGAGAGATGGTGGTCTACTGTTTCGATACCCTTCTCGCTCACTACAACGGCGAGGAAGCCCCTCCCCCTGCTTTCGACGGCGGTCAACAGTAATTTCTCTCTCTTTTTGTTGTTTTCGTCTGCGATTAGTGATTGTGTTCTGGGATTTGTTTGCATGTTTGGGGGTTTAGCATGTGATCGAGTCTGTGCTTTTACTAATTGTAACGTAGGTCGCTGGGTTTCGATTATGATCACGATGATCATCATTGGTTTGGTCTGTGATTTCTGTGTTTAGTTCTAATTGTTCGCGAGTACTTTAAATTTTTGTGAATTGTCCATTTTGTTTTTTTGTATTTTTGGTGACTGATGAAGTATTTTTATCGTTTTAAGTAGTTCAATACAATTTTTCTTAAATGGAACACAGGGAGAGGGAACATTTTGAGTATTTTCTAAATAATAGGTTCAATTGAGTTTGGACGTTCTATTGGTGAATGCTTCCTGTTTTGGCTCCGTTTTCCCTTTGTATATCCTTTCCTTTTCTCTACAATACGTGGTTTTTCATCTACAACTAAGGGAATAAGTTTGCTAAATAATGATAAAAAGAAAAATAATTGGGTTGTGGTGAGTGGTGACAAATGGTAAGAGGAATTACTGTTTCCATGTGGGTGCCAGGAAACCCAATTGAGCTACTTTTAGCTAGGCACTTCCTGCTACGTACCCTGAAAAGAGCAACTTTTGGAGAGCATCACAGGGAAAGCTCAATAAATTTAATCAGCATCTAATTTGATGTCTTTTTAAAACTCGATCGGCCCAAGAAACTTGTTTCTGTGCTTTTTATCTTTTTATTCATTGCCCAATTCTTCACGAAGTCTAAAGGGAAGAAATAAGAATATAGGCTTCTTAGGATCGGCTCCATTGCGCTCGACATCTTTGTTTCTAATTTTCCCAGAAAGCTTAGGAATCGTTTACAGAGATGTCGATGGATTATATTTACTGTAGTCATAAGTTCTCATTCAAGAGTTGAGGCACTGACATCAAGTCCTAGATACAAACAGGTTGTTTTTATGCACATGAGCTATGATGGTTGGTTAATCTGTATGATGAAATGTATTTCTGCTAAACATTTGCTTGGAAATTACTTATGATTATGTGTTTTCCTGTATTCGAAGATTTATATAAAACTGTTGTAAATACATGTTGGTTTGACACTTACTGAGTAATGATTTTTTAATTTCTTGTTATGTGGTTAAATCTAAGTTTATTAAGCAAAAAGAAGATAAAAAAAAGTTTTCACTGGTGTTAGTACAAAAGCCATGACCAACTAGTCATTGTCCAAGAAAATAAAAAAGTTTTCACTGGTCTTAGTTCAATGCCATGGCCAACTAGTCATTGTCCAATTTTATTTTGGATAGTTGCTTTGCTCTTGCAAGAAGGAAATCGAATTAGCAAGAACACGTGTCCGTAATCTATTGAATAATTTCTTCTGAAAGAGTTACCGGATAGAAAGTGACTGGACGAAAAGTGTTTCATAAGATTTATCTTTAACTTTCTCATGGCGTCCATACGTCTATTTCAAGAAGGTCGCTAAAAGAGTTTAATACAAAGCATTCCTATTGCCACATGTGTCTTAATAGATTGTGTATATGTGCGTTTTTTTTAAGACGTGCAGCTATCAATCTGTTGTTCATCTTTACATTTTGTGTGTGCTATCATGTGGTTAGACATACTTTTTTTTTTTTTTTAATTCAACACTTGCGCGGGTGGGAATTAAAGCATCGACCTTTCAGATGGTAGTTAGTGACTTTATCCATGAAGTTATGCTTATATCAACTGGTTAGCATATTTTTTGCAGATGCTTTTGTGATACTAAACACTTTTCAAAAGCCTTGTGCTTCATACCTAGAATATTATTATTGTAGGCTGCATCTATTTTCATTTTACGTGAATATATTTTTTTTCTGCCAGCCCCTTGTTCGTTACCTGGAAAAAAGTGGTCAATGGTGGTGAACCTCGTCTGCGAGGGTGCATAGGAACTCTAGAAGCTCGCTGCTTGATAAATGGCTTCAAGGATTATGCTTTAAATAGGTATTATTGCATAATGCATACTTCTACCTTTCCCCCACTGCTTTATCTAAAAACTTTTCCCAAATCAGTTGGCTGACTCAAATATTCTGGACAAAGTATTTCACAGCATAAGTGACTCTGTGATGATGGTGTTTATTATTGAATTTGGCTTTCCATTTCTGTAATTATTGATCTCTAAATAGCAATTACATGAAGATTGAAATTCTCATTTGCAAGTGATGTAGTGAAAAATCCAGAAGTCTGCCATAGTGGTGGTGCATGGTTTGCAACCTTAGTCTGTCACAACTCCAAGAACTTGTACCTCACTGCTTGTTATTAATTATGACTGTCTTTGCGCATACGATAAAAGATTGGTTCTGCTTACCTTTTCCCTGGTAGTATAGCATGAATTAACTATTGTCGTGACAAATTTAACAAAAATAAATGAGAATTTTCAATTCTTATAAGTTGGTTTGGACTTGGGTTGAAACTGTATAAATTTTTTAAGACAGGTTGAGGTTTTGCATGAATAAGAACCTTGTGGCATTGTAAATTTTGTATTTGGGTGCCTGTTATGAGTCCTTTAGCGCCTTTTTGTACTTCGAAGCGTATTATGAAGTTTTTGAATTATTACAAATGCTGTTGGATGTTTTTGTCAGTGATCAAAATAAAGGTCCAACTTAAAGTATAATGGAACAGCTTTGTAAATGTGATTGATTTGAAGTGAATGCGTAGAAACCTTCTATTCTTTCTATGTTAATCGGTTTCAAACGGGAGACTACCGCCTAAATCTCATAGTTAGGGAATTTTCAGTTATTTCTGCTTTCCAGAGTCGTTTTCACATTGCCCTCTCCCTGGCTTTCTTGAATCAAATTTTAAGGGAGAAAGTCAATGGGTGGATGAGAAGTCCATATGCATGACATAAGTGATCCATATTGTTGGAAGTTTGCTTCATTTAAAACTGATTTGGTAAATAAGTTCAGTGAAGGGGCGGTGGGGAGGAAGCTGGTTTGGTTAGCTAAGTTCGAGAGAGAATGAAAAGTCCATTGTTAAGTGACCTAACTGATTTGTATGTTAATTATTGATATTCAGGCATGAGGTCCATTGAGGGGGTGGGGGTAGTGGAACTCTTATGGCTTATTATTCCTTTGGACAAAGGAAGTGACCTTGGTTCTTTTGCTCTATCTTAACTCTTGGTTTCACATGCTCTCTTTTTTATTGTCATGTGAGATCCCACATCGGTTGGAAAGAGGAACGAAACCTTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGTGTTTTAAAACCATGAGGCTGGCGGCAATACGTAACGGGTCAAAGCGGACAATGTCCGCTAGCGGTGGGCTTGGACGGTTACAAATTGTGAGATACTACATCTGTTGGAGAGAGGAACGGAACATTCTTTATAAGGGTGTGGAATCCTCTCCCTAGCAAATGCATTTTAAAACCGTGAGGCTGACGGTTTGGGCTGTTACGTGTCATGACTAAATGCAAATTTTATTTTTCTATGGTTGAACTGACACTACAATGGGCATCTAAAGAGTTGGTTTTTTGTTCTTTTTTTCTTGAATATGTTGCAGTGCATTGAGGGACCGGAGGTTCCCCCCAATACAGCCTAAAGAATTACCACATTTGGAGTGCACAGTTTCCATTCTAGTTGATTATGAAATAGCTATAAATTATCTTGATTGGGAGGTACTTTTCTGTTCCCTTTTCTTAATCAAAGGTTTGTGTTTGTGTTCAGTGAGTACAATGGTTGGCTTTGGTTTTCTGTTGTCTCACAGAATCTGAGTGCCCTTTTTCCTTTCCATTAAACTCGAACAATTTTGTGCATTATTAATGATTAGAACAGGTCTGTCAGGCTTGAGCTACATTGTTAGAGTAAGATTCATAAACTACTACTATCAAGGAAGTCGGATGTTAGGCCTCCTGGTACGATAAGGGCCAAAAAGGGGATTAACCCCCTCCAGGAGTTAATTTGTTATTAGACACTAACTAGTTTAATTTAACCCTTTTTCTCTCATTGTATTATCAGTTGTTTTGATGCCAACTAGAAGCACATACTTTTCAGGAAAATGGAAAACATTTAAGCTAGTAAGCTACCGTGAGATCCCACATCGGTTGGAGAGAGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACAGGTTTTCTTAAAAACCTTGAGGGGAAGCCCAGAAAGGAAAGGCCGAAGAGGATAATATTTGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATCAGAGTCAGACAACTGGCGGTGTGCCAACGAGGATGTTGGGCCCTCAAGGGGGGTAGATAGTGAGATCCCACATTGGTTGGAGAGGAAAACGAAGCATTTCTTATAAGGGTGTGGAAATCTCTCCCTATCGCGTTTCAAAAACCTTAAGGGGAAGCCTAGAAGGGAAAGCGCAAAGAGGGCAAAGAGGACAATATTTGTTAGCGGTGAGCTTGGGCTCTTACAGCTACTAAATACATCTAGGATGTTTGAACGACAGGAACTTTCTTGCTATATATTATCACAGGACAGGCTCATAGGCATAACTTGCAAGTGTTTACTCGAGTAGCCTTGCTAAGTAGTAAATGATGGCTGTATTCAAGATGCATGTTTAGTTCATAGTTAAGTACTGTATGAATAACAATACTTTTGCATATATGTAAAGGCTTGATTGTTGGAAATTCAGAAAATGCATTGCCATTATGGCTTGCAAGGATTGGTCGTGCCCGTTGCTTGATTCTGGCTAGTTTGCCCGAAATTTTAAGCTTGGTCCTGTCCTGCTTGCCTGTCGTGTTTTTGGTCAGTCCCACAGAATAGCCAGTCTTGCAGGTAGGCTTTCCGTAATCAGGGGTCATCGTATCTTATTGCAGGTAGGTAAGCATGGTATTATTATTGAATTTAATGATCCCGACTATAATACTAGACGAAGTGCTACGTATCTGCCCGAGGTAGCTGCCCATGAAGGTATGTCTACGGTGCTTTTTGTCGATAAATATTCGTCCTCTTTTCATTGTCATGTGAAATCCAGTGATTTGCTTGGTATACAAAGCAGTGGGGCGGAGTCCGCCCCCTCCCCCTCCCCCTCCCTCCCATACGTGGTCGATCTTCCCATGTTTAGTAAAAAAGTTTGCCGTTTTTGCTGTCGATACCCTCTATCTTCCTTCTGCAATATAGGCAGATTATCGAGCAGCCTGATTTGTGCACTTTAATTGAACATATCTTTGTGAAACATAGTTTTTTTGGCTAAAATGTTGTCAAATCTCTGTTTAGCTTTATACTTCCTCCAGCTGACCGAGGTTTCGGGTTTGGCTGCATCTTGATTATCAGGTTGGACAAAAATTGAGGCTATCGACTCATTGGTGCGGAAGGCAGGATACAATGGTGCAATCACCGAGTCACTGCGTAAGCGTATTCGATTGACCCGGTACCAGAGCACCCTATTCACCATGCACTACGGTGAGTATGTGTCCTATGTTAAAACCACCCGGGGCACGACCCCTTGCGTTGTCGGGGCTAAAGCCTAACAACCATTGATTCTTCCAAACGGCTCTTGCTAAAACCTGCAAGGCGTAAGTTTGGGTACTGAACTGAACTAAAACAAGATATTGGATGCTTGAGTGATTTGTATTGTGTTCCATCGCTATCTTTTCAATGCCATTCAACAAGAAAAAAACTGAAAGAACCCATGCTCTGTAAGACTTTCTTCAACCTTTCCAAGTTCTAATTATCATATTTCTATTTATATCGATGGCTTCGCTTGTTTCATTTCTTTTTTCGGTTGATCCGTGTCATTAGTCGAGGTGTGTGCAAG GGCGACGAACAAAGGCTCTAGAGCGAGAAAGAGAGAGGGAAAGAAAAGAGGAGTGAGAAAAAAAGCTCTTCTTCTTCTTCCTGCTGCTGCTATTCCTGTTCTTCTTCCTCTTCCTTCTCCCTCTCCCTCTTAATTTCTTAGTAATTTCGTTATCAAATCCTCCTCCTCCTCCTCAACCTACCATTGATTTTCCACCTTCTTCACTTCACTGCTCACTGATTACGCCAACCATGGTGTCGGCCAACAGAGAGATGGTGGTCTACTGTTTCGATACCCTTCTCGCTCACTACAACGGCGAGGAAGCCCCTCCCCCTGCTTTCGACGGCGGTCAACACCCCTTGTTCGTTACCTGGAAAAAAGTGGTCAATGGTGGTGAACCTCGTCTGCGAGGGTGCATAGGAACTCTAGAAGCTCGCTGCTTGATAAATGGCTTCAAGGATTATGCTTTAAATAGTGCATTGAGGGACCGGAGGTTCCCCCCAATACAGCCTAAAGAATTACCACATTTGGAGTGCACAGTTTCCATTCTAGTTGATTATGAAATAGCTATAAATTATCTTGATTGGGAGGTACTTTTCTGTTCCCTTTTCTTAATCAAAGAAAATGCATTGCCATTATGGCTTGCAAGGATTGGTCGTGCCCGTTGCTTGATTCTGGCTAGTTTGCCCGAAATTTTAAGCTTGGTCCTGTCCTGCTTGCCTGTCGTGTTTTTGGTAGGTAAGCATGGTATTATTATTGAATTTAATGATCCCGACTATAATACTAGACGAAGTGCTACGTATCTGCCCGAGGTAGCTGCCCATGAAGGTTGGACAAAAATTGAGGCTATCGACTCATTGGTGCGGAAGGCAGGATACAATGGTGCAATCACCGAGTCACTGCGTAAGCGTATTCGATTGACCCGGTACCAGAGCACCCTATTCACCATGCACTACGGTGAGTATGTGTCCTATGTTAAAACCACCCGGGGCACGACCCCTTGCGTTGTCGGGGCTAAAGCCTAACAACCATTGATTCTTCCAAACGGCTCTTGCTAAAACCTGCAAGGCGTAAGTTTGGGTACTGAACTGAACTAAAACAAGATATTGGATGCTTGAGTGATTTGTATTGTGTTCCATCGCTATCTTTTCAATGCCATTCAACAAGAAAAAAACTGAAAGAACCCATGCTCTGTAAGACTTTCTTCAACCTTTCCAAGTTCTAATTATCATATTTCTATTTATATCGATGGCTTCGCTTGTTTCATTTCTTTTTTCGGTTGATCCGTGTCATTAGTCGAGGTGTGTGCAAG ATGGTGTCGGCCAACAGAGAGATGGTGGTCTACTGTTTCGATACCCTTCTCGCTCACTACAACGGCGAGGAAGCCCCTCCCCCTGCTTTCGACGGCGGTCAACACCCCTTGTTCGTTACCTGGAAAAAAGTGGTCAATGGTGGTGAACCTCGTCTGCGAGGGTGCATAGGAACTCTAGAAGCTCGCTGCTTGATAAATGGCTTCAAGGATTATGCTTTAAATAGTGCATTGAGGGACCGGAGGTTCCCCCCAATACAGCCTAAAGAATTACCACATTTGGAGTGCACAGTTTCCATTCTAGTTGATTATGAAATAGCTATAAATTATCTTGATTGGGAGGTACTTTTCTGTTCCCTTTTCTTAATCAAAGAAAATGCATTGCCATTATGGCTTGCAAGGATTGGTCGTGCCCGTTGCTTGATTCTGGCTAGTTTGCCCGAAATTTTAAGCTTGGTCCTGTCCTGCTTGCCTGTCGTGTTTTTGGTAGGTAAGCATGGTATTATTATTGAATTTAATGATCCCGACTATAATACTAGACGAAGTGCTACGTATCTGCCCGAGGTAGCTGCCCATGAAGGTTGGACAAAAATTGAGGCTATCGACTCATTGGTGCGGAAGGCAGGATACAATGGTGCAATCACCGAGTCACTGCGTAAGCGTATTCGATTGACCCGGTACCAGAGCACCCTATTCACCATGCACTACGGTGAGTATGTGTCCTATGTTAAAACCACCCGGGGCACGACCCCTTGCGTTGTCGGGGCTAAAGCCTAA
BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_ARATH (Uncharacterized protein At2g38710 OS=Arabidopsis thaliana GN=At2g38710 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.8e-52 Identity = 93/114 (81.58%), Postives = 101/114 (88.60%), Query Frame = 1
BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_HUMAN (AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25 Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 1
BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_MOUSE (AMMECR1-like protein OS=Mus musculus GN=Ammecr1l PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25 Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 1
BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_PONAB (AMMECR1-like protein OS=Pongo abelii GN=AMMECR1L PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25 Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 1
BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMMR1_PONAB (AMME syndrome candidate gene 1 protein homolog OS=Pongo abelii GN=AMMECR1 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.2e-24 Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1
BLAST of CmoCh15G005320 vs. TrEMBL
Match: I1QW66_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 5.7e-89 Identity = 165/255 (64.71%), Postives = 192/255 (75.29%), Query Frame = 1
BLAST of CmoCh15G005320 vs. TrEMBL
Match: Q7XBY9_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g42250 PE=4 SV=2) HSP 1 Score: 333.6 bits (854), Expect = 2.2e-88 Identity = 164/255 (64.31%), Postives = 191/255 (74.90%), Query Frame = 1
BLAST of CmoCh15G005320 vs. TrEMBL
Match: A0A0A0KCF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046200 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 7.8e-62 Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 1
BLAST of CmoCh15G005320 vs. TrEMBL
Match: A0A103YIC7_CYNCS (AMMECR1-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012004 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 8.3e-56 Identity = 101/114 (88.60%), Postives = 108/114 (94.74%), Query Frame = 1
BLAST of CmoCh15G005320 vs. TrEMBL
Match: A0A061FQA5_THECC (AMMECR1 family OS=Theobroma cacao GN=TCM_044221 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.9e-55 Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 1
BLAST of CmoCh15G005320 vs. TAIR10
Match: AT2G38710.1 (AT2G38710.1 AMMECR1 family) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53 Identity = 93/114 (81.58%), Postives = 101/114 (88.60%), Query Frame = 1
BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|1002302466|ref|XP_015614613.1| (PREDICTED: uncharacterized protein At2g38710 isoform X1 [Oryza sativa Japonica Group]) HSP 1 Score: 333.6 bits (854), Expect = 3.1e-88 Identity = 164/255 (64.31%), Postives = 191/255 (74.90%), Query Frame = 1
BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|992280776|gb|KXG38863.1| (hypothetical protein SORBI_001G289400 [Sorghum bicolor]) HSP 1 Score: 331.3 bits (848), Expect = 1.5e-87 Identity = 166/257 (64.59%), Postives = 189/257 (73.54%), Query Frame = 1
BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|720050025|ref|XP_010271633.1| (PREDICTED: uncharacterized protein At2g38710-like isoform X1 [Nelumbo nucifera]) HSP 1 Score: 259.6 bits (662), Expect = 5.7e-66 Identity = 140/252 (55.56%), Postives = 159/252 (63.10%), Query Frame = 1
BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|449446293|ref|XP_004140906.1| (PREDICTED: uncharacterized protein At2g38710 [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61 Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 1
BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|659113496|ref|XP_008456604.1| (PREDICTED: uncharacterized protein At2g38710 [Cucumis melo]) HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61 Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |