CmoCh15G005320 (gene) Cucurbita moschata (Rifu)

NameCmoCh15G005320
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAMME syndrome candidateprotein 1 protein, putative
LocationCmo_Chr15 : 2504787 .. 2510940 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGACGAACAAAGGCTCTAGAGCGAGAAAGAGAGAGGGAAAGAAAAGAGGAGTGAGAAAAAAAGCTCTTCTTCTTCTTCCTGCTGCTGCTATTCCTGTTCTTCTTCCTCTTCCTTCTCCCTCTCCCTCTTAATTTCTTAGTAATTTCGTTATCAAATCCTCCTCCTCCTCCTCAACCTACCATTGATTTTCCACCTTCTTCACTTCACTGCTCACTGATTACGCCAACCATGGTGTCGGCCAACAGAGAGATGGTGGTCTACTGTTTCGATACCCTTCTCGCTCACTACAACGGCGAGGAAGCCCCTCCCCCTGCTTTCGACGGCGGTCAACAGTAATTTCTCTCTCTTTTTGTTGTTTTCGTCTGCGATTAGTGATTGTGTTCTGGGATTTGTTTGCATGTTTGGGGGTTTAGCATGTGATCGAGTCTGTGCTTTTACTAATTGTAACGTAGGTCGCTGGGTTTCGATTATGATCACGATGATCATCATTGGTTTGGTCTGTGATTTCTGTGTTTAGTTCTAATTGTTCGCGAGTACTTTAAATTTTTGTGAATTGTCCATTTTGTTTTTTTGTATTTTTGGTGACTGATGAAGTATTTTTATCGTTTTAAGTAGTTCAATACAATTTTTCTTAAATGGAACACAGGGAGAGGGAACATTTTGAGTATTTTCTAAATAATAGGTTCAATTGAGTTTGGACGTTCTATTGGTGAATGCTTCCTGTTTTGGCTCCGTTTTCCCTTTGTATATCCTTTCCTTTTCTCTACAATACGTGGTTTTTCATCTACAACTAAGGGAATAAGTTTGCTAAATAATGATAAAAAGAAAAATAATTGGGTTGTGGTGAGTGGTGACAAATGGTAAGAGGAATTACTGTTTCCATGTGGGTGCCAGGAAACCCAATTGAGCTACTTTTAGCTAGGCACTTCCTGCTACGTACCCTGAAAAGAGCAACTTTTGGAGAGCATCACAGGGAAAGCTCAATAAATTTAATCAGCATCTAATTTGATGTCTTTTTAAAACTCGATCGGCCCAAGAAACTTGTTTCTGTGCTTTTTATCTTTTTATTCATTGCCCAATTCTTCACGAAGTCTAAAGGGAAGAAATAAGAATATAGGCTTCTTAGGATCGGCTCCATTGCGCTCGACATCTTTGTTTCTAATTTTCCCAGAAAGCTTAGGAATCGTTTACAGAGATGTCGATGGATTATATTTACTGTAGTCATAAGTTCTCATTCAAGAGTTGAGGCACTGACATCAAGTCCTAGATACAAACAGGTTGTTTTTATGCACATGAGCTATGATGGTTGGTTAATCTGTATGATGAAATGTATTTCTGCTAAACATTTGCTTGGAAATTACTTATGATTATGTGTTTTCCTGTATTCGAAGATTTATATAAAACTGTTGTAAATACATGTTGGTTTGACACTTACTGAGTAATGATTTTTTAATTTCTTGTTATGTGGTTAAATCTAAGTTTATTAAGCAAAAAGAAGATAAAAAAAAGTTTTCACTGGTGTTAGTACAAAAGCCATGACCAACTAGTCATTGTCCAAGAAAATAAAAAAGTTTTCACTGGTCTTAGTTCAATGCCATGGCCAACTAGTCATTGTCCAATTTTATTTTGGATAGTTGCTTTGCTCTTGCAAGAAGGAAATCGAATTAGCAAGAACACGTGTCCGTAATCTATTGAATAATTTCTTCTGAAAGAGTTACCGGATAGAAAGTGACTGGACGAAAAGTGTTTCATAAGATTTATCTTTAACTTTCTCATGGCGTCCATACGTCTATTTCAAGAAGGTCGCTAAAAGAGTTTAATACAAAGCATTCCTATTGCCACATGTGTCTTAATAGATTGTGTATATGTGCGTTTTTTTTAAGACGTGCAGCTATCAATCTGTTGTTCATCTTTACATTTTGTGTGTGCTATCATGTGGTTAGACATACTTTTTTTTTTTTTTTAATTCAACACTTGCGCGGGTGGGAATTAAAGCATCGACCTTTCAGATGGTAGTTAGTGACTTTATCCATGAAGTTATGCTTATATCAACTGGTTAGCATATTTTTTGCAGATGCTTTTGTGATACTAAACACTTTTCAAAAGCCTTGTGCTTCATACCTAGAATATTATTATTGTAGGCTGCATCTATTTTCATTTTACGTGAATATATTTTTTTTCTGCCAGCCCCTTGTTCGTTACCTGGAAAAAAGTGGTCAATGGTGGTGAACCTCGTCTGCGAGGGTGCATAGGAACTCTAGAAGCTCGCTGCTTGATAAATGGCTTCAAGGATTATGCTTTAAATAGGTATTATTGCATAATGCATACTTCTACCTTTCCCCCACTGCTTTATCTAAAAACTTTTCCCAAATCAGTTGGCTGACTCAAATATTCTGGACAAAGTATTTCACAGCATAAGTGACTCTGTGATGATGGTGTTTATTATTGAATTTGGCTTTCCATTTCTGTAATTATTGATCTCTAAATAGCAATTACATGAAGATTGAAATTCTCATTTGCAAGTGATGTAGTGAAAAATCCAGAAGTCTGCCATAGTGGTGGTGCATGGTTTGCAACCTTAGTCTGTCACAACTCCAAGAACTTGTACCTCACTGCTTGTTATTAATTATGACTGTCTTTGCGCATACGATAAAAGATTGGTTCTGCTTACCTTTTCCCTGGTAGTATAGCATGAATTAACTATTGTCGTGACAAATTTAACAAAAATAAATGAGAATTTTCAATTCTTATAAGTTGGTTTGGACTTGGGTTGAAACTGTATAAATTTTTTAAGACAGGTTGAGGTTTTGCATGAATAAGAACCTTGTGGCATTGTAAATTTTGTATTTGGGTGCCTGTTATGAGTCCTTTAGCGCCTTTTTGTACTTCGAAGCGTATTATGAAGTTTTTGAATTATTACAAATGCTGTTGGATGTTTTTGTCAGTGATCAAAATAAAGGTCCAACTTAAAGTATAATGGAACAGCTTTGTAAATGTGATTGATTTGAAGTGAATGCGTAGAAACCTTCTATTCTTTCTATGTTAATCGGTTTCAAACGGGAGACTACCGCCTAAATCTCATAGTTAGGGAATTTTCAGTTATTTCTGCTTTCCAGAGTCGTTTTCACATTGCCCTCTCCCTGGCTTTCTTGAATCAAATTTTAAGGGAGAAAGTCAATGGGTGGATGAGAAGTCCATATGCATGACATAAGTGATCCATATTGTTGGAAGTTTGCTTCATTTAAAACTGATTTGGTAAATAAGTTCAGTGAAGGGGCGGTGGGGAGGAAGCTGGTTTGGTTAGCTAAGTTCGAGAGAGAATGAAAAGTCCATTGTTAAGTGACCTAACTGATTTGTATGTTAATTATTGATATTCAGGCATGAGGTCCATTGAGGGGGTGGGGGTAGTGGAACTCTTATGGCTTATTATTCCTTTGGACAAAGGAAGTGACCTTGGTTCTTTTGCTCTATCTTAACTCTTGGTTTCACATGCTCTCTTTTTTATTGTCATGTGAGATCCCACATCGGTTGGAAAGAGGAACGAAACCTTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGTGTTTTAAAACCATGAGGCTGGCGGCAATACGTAACGGGTCAAAGCGGACAATGTCCGCTAGCGGTGGGCTTGGACGGTTACAAATTGTGAGATACTACATCTGTTGGAGAGAGGAACGGAACATTCTTTATAAGGGTGTGGAATCCTCTCCCTAGCAAATGCATTTTAAAACCGTGAGGCTGACGGTTTGGGCTGTTACGTGTCATGACTAAATGCAAATTTTATTTTTCTATGGTTGAACTGACACTACAATGGGCATCTAAAGAGTTGGTTTTTTGTTCTTTTTTTCTTGAATATGTTGCAGTGCATTGAGGGACCGGAGGTTCCCCCCAATACAGCCTAAAGAATTACCACATTTGGAGTGCACAGTTTCCATTCTAGTTGATTATGAAATAGCTATAAATTATCTTGATTGGGAGGTACTTTTCTGTTCCCTTTTCTTAATCAAAGGTTTGTGTTTGTGTTCAGTGAGTACAATGGTTGGCTTTGGTTTTCTGTTGTCTCACAGAATCTGAGTGCCCTTTTTCCTTTCCATTAAACTCGAACAATTTTGTGCATTATTAATGATTAGAACAGGTCTGTCAGGCTTGAGCTACATTGTTAGAGTAAGATTCATAAACTACTACTATCAAGGAAGTCGGATGTTAGGCCTCCTGGTACGATAAGGGCCAAAAAGGGGATTAACCCCCTCCAGGAGTTAATTTGTTATTAGACACTAACTAGTTTAATTTAACCCTTTTTCTCTCATTGTATTATCAGTTGTTTTGATGCCAACTAGAAGCACATACTTTTCAGGAAAATGGAAAACATTTAAGCTAGTAAGCTACCGTGAGATCCCACATCGGTTGGAGAGAGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACAGGTTTTCTTAAAAACCTTGAGGGGAAGCCCAGAAAGGAAAGGCCGAAGAGGATAATATTTGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATCAGAGTCAGACAACTGGCGGTGTGCCAACGAGGATGTTGGGCCCTCAAGGGGGGTAGATAGTGAGATCCCACATTGGTTGGAGAGGAAAACGAAGCATTTCTTATAAGGGTGTGGAAATCTCTCCCTATCGCGTTTCAAAAACCTTAAGGGGAAGCCTAGAAGGGAAAGCGCAAAGAGGGCAAAGAGGACAATATTTGTTAGCGGTGAGCTTGGGCTCTTACAGCTACTAAATACATCTAGGATGTTTGAACGACAGGAACTTTCTTGCTATATATTATCACAGGACAGGCTCATAGGCATAACTTGCAAGTGTTTACTCGAGTAGCCTTGCTAAGTAGTAAATGATGGCTGTATTCAAGATGCATGTTTAGTTCATAGTTAAGTACTGTATGAATAACAATACTTTTGCATATATGTAAAGGCTTGATTGTTGGAAATTCAGAAAATGCATTGCCATTATGGCTTGCAAGGATTGGTCGTGCCCGTTGCTTGATTCTGGCTAGTTTGCCCGAAATTTTAAGCTTGGTCCTGTCCTGCTTGCCTGTCGTGTTTTTGGTCAGTCCCACAGAATAGCCAGTCTTGCAGGTAGGCTTTCCGTAATCAGGGGTCATCGTATCTTATTGCAGGTAGGTAAGCATGGTATTATTATTGAATTTAATGATCCCGACTATAATACTAGACGAAGTGCTACGTATCTGCCCGAGGTAGCTGCCCATGAAGGTATGTCTACGGTGCTTTTTGTCGATAAATATTCGTCCTCTTTTCATTGTCATGTGAAATCCAGTGATTTGCTTGGTATACAAAGCAGTGGGGCGGAGTCCGCCCCCTCCCCCTCCCCCTCCCTCCCATACGTGGTCGATCTTCCCATGTTTAGTAAAAAAGTTTGCCGTTTTTGCTGTCGATACCCTCTATCTTCCTTCTGCAATATAGGCAGATTATCGAGCAGCCTGATTTGTGCACTTTAATTGAACATATCTTTGTGAAACATAGTTTTTTTGGCTAAAATGTTGTCAAATCTCTGTTTAGCTTTATACTTCCTCCAGCTGACCGAGGTTTCGGGTTTGGCTGCATCTTGATTATCAGGTTGGACAAAAATTGAGGCTATCGACTCATTGGTGCGGAAGGCAGGATACAATGGTGCAATCACCGAGTCACTGCGTAAGCGTATTCGATTGACCCGGTACCAGAGCACCCTATTCACCATGCACTACGGTGAGTATGTGTCCTATGTTAAAACCACCCGGGGCACGACCCCTTGCGTTGTCGGGGCTAAAGCCTAACAACCATTGATTCTTCCAAACGGCTCTTGCTAAAACCTGCAAGGCGTAAGTTTGGGTACTGAACTGAACTAAAACAAGATATTGGATGCTTGAGTGATTTGTATTGTGTTCCATCGCTATCTTTTCAATGCCATTCAACAAGAAAAAAACTGAAAGAACCCATGCTCTGTAAGACTTTCTTCAACCTTTCCAAGTTCTAATTATCATATTTCTATTTATATCGATGGCTTCGCTTGTTTCATTTCTTTTTTCGGTTGATCCGTGTCATTAGTCGAGGTGTGTGCAAG

mRNA sequence

GGCGACGAACAAAGGCTCTAGAGCGAGAAAGAGAGAGGGAAAGAAAAGAGGAGTGAGAAAAAAAGCTCTTCTTCTTCTTCCTGCTGCTGCTATTCCTGTTCTTCTTCCTCTTCCTTCTCCCTCTCCCTCTTAATTTCTTAGTAATTTCGTTATCAAATCCTCCTCCTCCTCCTCAACCTACCATTGATTTTCCACCTTCTTCACTTCACTGCTCACTGATTACGCCAACCATGGTGTCGGCCAACAGAGAGATGGTGGTCTACTGTTTCGATACCCTTCTCGCTCACTACAACGGCGAGGAAGCCCCTCCCCCTGCTTTCGACGGCGGTCAACACCCCTTGTTCGTTACCTGGAAAAAAGTGGTCAATGGTGGTGAACCTCGTCTGCGAGGGTGCATAGGAACTCTAGAAGCTCGCTGCTTGATAAATGGCTTCAAGGATTATGCTTTAAATAGTGCATTGAGGGACCGGAGGTTCCCCCCAATACAGCCTAAAGAATTACCACATTTGGAGTGCACAGTTTCCATTCTAGTTGATTATGAAATAGCTATAAATTATCTTGATTGGGAGGTACTTTTCTGTTCCCTTTTCTTAATCAAAGAAAATGCATTGCCATTATGGCTTGCAAGGATTGGTCGTGCCCGTTGCTTGATTCTGGCTAGTTTGCCCGAAATTTTAAGCTTGGTCCTGTCCTGCTTGCCTGTCGTGTTTTTGGTAGGTAAGCATGGTATTATTATTGAATTTAATGATCCCGACTATAATACTAGACGAAGTGCTACGTATCTGCCCGAGGTAGCTGCCCATGAAGGTTGGACAAAAATTGAGGCTATCGACTCATTGGTGCGGAAGGCAGGATACAATGGTGCAATCACCGAGTCACTGCGTAAGCGTATTCGATTGACCCGGTACCAGAGCACCCTATTCACCATGCACTACGGTGAGTATGTGTCCTATGTTAAAACCACCCGGGGCACGACCCCTTGCGTTGTCGGGGCTAAAGCCTAACAACCATTGATTCTTCCAAACGGCTCTTGCTAAAACCTGCAAGGCGTAAGTTTGGGTACTGAACTGAACTAAAACAAGATATTGGATGCTTGAGTGATTTGTATTGTGTTCCATCGCTATCTTTTCAATGCCATTCAACAAGAAAAAAACTGAAAGAACCCATGCTCTGTAAGACTTTCTTCAACCTTTCCAAGTTCTAATTATCATATTTCTATTTATATCGATGGCTTCGCTTGTTTCATTTCTTTTTTCGGTTGATCCGTGTCATTAGTCGAGGTGTGTGCAAG

Coding sequence (CDS)

ATGGTGTCGGCCAACAGAGAGATGGTGGTCTACTGTTTCGATACCCTTCTCGCTCACTACAACGGCGAGGAAGCCCCTCCCCCTGCTTTCGACGGCGGTCAACACCCCTTGTTCGTTACCTGGAAAAAAGTGGTCAATGGTGGTGAACCTCGTCTGCGAGGGTGCATAGGAACTCTAGAAGCTCGCTGCTTGATAAATGGCTTCAAGGATTATGCTTTAAATAGTGCATTGAGGGACCGGAGGTTCCCCCCAATACAGCCTAAAGAATTACCACATTTGGAGTGCACAGTTTCCATTCTAGTTGATTATGAAATAGCTATAAATTATCTTGATTGGGAGGTACTTTTCTGTTCCCTTTTCTTAATCAAAGAAAATGCATTGCCATTATGGCTTGCAAGGATTGGTCGTGCCCGTTGCTTGATTCTGGCTAGTTTGCCCGAAATTTTAAGCTTGGTCCTGTCCTGCTTGCCTGTCGTGTTTTTGGTAGGTAAGCATGGTATTATTATTGAATTTAATGATCCCGACTATAATACTAGACGAAGTGCTACGTATCTGCCCGAGGTAGCTGCCCATGAAGGTTGGACAAAAATTGAGGCTATCGACTCATTGGTGCGGAAGGCAGGATACAATGGTGCAATCACCGAGTCACTGCGTAAGCGTATTCGATTGACCCGGTACCAGAGCACCCTATTCACCATGCACTACGGTGAGTATGTGTCCTATGTTAAAACCACCCGGGGCACGACCCCTTGCGTTGTCGGGGCTAAAGCCTAA
BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_ARATH (Uncharacterized protein At2g38710 OS=Arabidopsis thaliana GN=At2g38710 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-52
Identity = 93/114 (81.58%), Postives = 101/114 (88.60%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREM VYCFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           AR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L DYE A +YLDWEV
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEV 114

BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_HUMAN (AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 1

Query: 7   EMVVYCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  YCFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLH 166

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E A +YLDWEV
Sbjct: 167 SGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEV 212

BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_MOUSE (AMMECR1-like protein OS=Mus musculus GN=Ammecr1l PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 1

Query: 7   EMVVYCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  YCFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLH 166

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E A +YLDWEV
Sbjct: 167 SGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEV 212

BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMERL_PONAB (AMMECR1-like protein OS=Pongo abelii GN=AMMECR1L PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 57/109 (52.29%), Postives = 70/109 (64.22%), Query Frame = 1

Query: 7   EMVVYCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  YCFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLH 166

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E A +YLDWEV
Sbjct: 167 SGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWEV 212

BLAST of CmoCh15G005320 vs. Swiss-Prot
Match: AMMR1_PONAB (AMME syndrome candidate gene 1 protein homolog OS=Pongo abelii GN=AMMECR1 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-24
Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1

Query: 7   EMVVYCFDTLLAHYNGEEAP-PPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  +CFD L  H  G + P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 129 EMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKI---GRDKRLRGCIGTFSAMNLH 188

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           +G ++Y L SAL+D RFPP+   ELP L C+VS+L ++E   +YLDWEV
Sbjct: 189 SGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEV 234

BLAST of CmoCh15G005320 vs. TrEMBL
Match: I1QW66_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.7e-89
Identity = 165/255 (64.71%), Postives = 192/255 (75.29%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MV A  EM VYCFD L++HY+G++ PPPAF+ G HPLFVTWKK  NG EPRLRGCIGTLE
Sbjct: 1   MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGIHPLFVTWKKATNGSEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEVLFCSLF 120
           AR ++ GFK+YAL SALRDRRFPPIQ KELP+LECTVSIL +YE A+N+LDWEV   +L 
Sbjct: 61  ARQIVTGFKEYALTSALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVCNYTLV 120

Query: 121 LIKENALPLWLARIGRARCLILASLPEILSLVLSCLPVVFLVGKHGIIIEFNDPDYNTRR 180
           L+                         +LSL  + L VV  VGKHG+IIEF DPDYN RR
Sbjct: 121 LV-------------------------VLSLSSNNL-VVLQVGKHGLIIEFTDPDYNMRR 180

Query: 181 SATYLPEVAAHEGWTKIEAIDSLVRKAGYNGAITESLRKRIRLTRYQSTLFTMHYGEYVS 240
           SATYLPEVAAHEGWT +E IDSL+RKAGYNG IT+SLRK++R+TRYQSTL+TMHYGEY +
Sbjct: 181 SATYLPEVAAHEGWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQSTLYTMHYGEYAA 229

Query: 241 YVKTTRGTTPCVVGA 256
           YVK  RG TP + GA
Sbjct: 241 YVKKNRGATPEINGA 229

BLAST of CmoCh15G005320 vs. TrEMBL
Match: Q7XBY9_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g42250 PE=4 SV=2)

HSP 1 Score: 333.6 bits (854), Expect = 2.2e-88
Identity = 164/255 (64.31%), Postives = 191/255 (74.90%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MV A  EM VYCFD L++HY+G++ PPPAF+ G HPLFVTWKK  NG EPRLRGCIGTLE
Sbjct: 1   MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGIHPLFVTWKKATNGSEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEVLFCSLF 120
           AR ++ GFK+YAL SALRDRRFPPIQ KELP+LECTVSIL +YE A+N+LDWEV   +L 
Sbjct: 61  ARQIVTGFKEYALTSALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVCNYTLV 120

Query: 121 LIKENALPLWLARIGRARCLILASLPEILSLVLSCLPVVFLVGKHGIIIEFNDPDYNTRR 180
           L+                         +LSL  + L VV  VGKHG+IIEF DPDYN RR
Sbjct: 121 LV-------------------------VLSLSSNNL-VVLQVGKHGLIIEFTDPDYNMRR 180

Query: 181 SATYLPEVAAHEGWTKIEAIDSLVRKAGYNGAITESLRKRIRLTRYQSTLFTMHYGEYVS 240
           SATYLPEVAAHEGWT +E IDSL+RKAGYNG IT+SLRK++R+TRYQSTL+TMHYGEY +
Sbjct: 181 SATYLPEVAAHEGWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQSTLYTMHYGEYAA 229

Query: 241 YVKTTRGTTPCVVGA 256
           YVK  RG  P + GA
Sbjct: 241 YVKKNRGAAPEINGA 229

BLAST of CmoCh15G005320 vs. TrEMBL
Match: A0A0A0KCF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046200 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.8e-62
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYEIA NYLDWEV
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWEV 114

BLAST of CmoCh15G005320 vs. TrEMBL
Match: A0A103YIC7_CYNCS (AMMECR1-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012004 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.3e-56
Identity = 101/114 (88.60%), Postives = 108/114 (94.74%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSAN+EMVVYCFDTL+AH+NGE+APPPAFD GQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANKEMVVYCFDTLVAHFNGEQAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           ARC+INGFKDYAL SALRDRRFPPIQ KELP L+CTVSIL +YEIA NYLDWEV
Sbjct: 61  ARCIINGFKDYALTSALRDRRFPPIQAKELPFLQCTVSILTNYEIAANYLDWEV 114

BLAST of CmoCh15G005320 vs. TrEMBL
Match: A0A061FQA5_THECC (AMMECR1 family OS=Theobroma cacao GN=TCM_044221 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-55
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTL+AHYN EEAPPPAFD GQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVFCFDTLVAHYNSEEAPPPAFDEGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           ARCLINGFKDYAL SALRDRRFPPIQ KELP LECTVSIL DYE A NY DWEV
Sbjct: 61  ARCLINGFKDYALTSALRDRRFPPIQAKELPCLECTVSILTDYETANNYFDWEV 114

BLAST of CmoCh15G005320 vs. TAIR10
Match: AT2G38710.1 (AT2G38710.1 AMMECR1 family)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53
Identity = 93/114 (81.58%), Postives = 101/114 (88.60%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREM VYCFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           AR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L DYE A +YLDWEV
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEV 114

BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|1002302466|ref|XP_015614613.1| (PREDICTED: uncharacterized protein At2g38710 isoform X1 [Oryza sativa Japonica Group])

HSP 1 Score: 333.6 bits (854), Expect = 3.1e-88
Identity = 164/255 (64.31%), Postives = 191/255 (74.90%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MV A  EM VYCFD L++HY+G++ PPPAF+ G HPLFVTWKK  NG EPRLRGCIGTLE
Sbjct: 1   MVVATEEMAVYCFDALVSHYSGDQPPPPAFEEGIHPLFVTWKKATNGSEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEVLFCSLF 120
           AR ++ GFK+YAL SALRDRRFPPIQ KELP+LECTVSIL +YE A+N+LDWEV   +L 
Sbjct: 61  ARQIVTGFKEYALTSALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVCNYTLV 120

Query: 121 LIKENALPLWLARIGRARCLILASLPEILSLVLSCLPVVFLVGKHGIIIEFNDPDYNTRR 180
           L+                         +LSL  + L VV  VGKHG+IIEF DPDYN RR
Sbjct: 121 LV-------------------------VLSLSSNNL-VVLQVGKHGLIIEFTDPDYNMRR 180

Query: 181 SATYLPEVAAHEGWTKIEAIDSLVRKAGYNGAITESLRKRIRLTRYQSTLFTMHYGEYVS 240
           SATYLPEVAAHEGWT +E IDSL+RKAGYNG IT+SLRK++R+TRYQSTL+TMHYGEY +
Sbjct: 181 SATYLPEVAAHEGWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQSTLYTMHYGEYAA 229

Query: 241 YVKTTRGTTPCVVGA 256
           YVK  RG  P + GA
Sbjct: 241 YVKKNRGAAPEINGA 229

BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|992280776|gb|KXG38863.1| (hypothetical protein SORBI_001G289400 [Sorghum bicolor])

HSP 1 Score: 331.3 bits (848), Expect = 1.5e-87
Identity = 166/257 (64.59%), Postives = 189/257 (73.54%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MV A  EM VYCFDTL+AHY GE+ PPPAF+ G HPLFVTWKKV NG EPRLRGCIGTLE
Sbjct: 1   MVVATEEMAVYCFDTLVAHYTGEQPPPPAFEDGNHPLFVTWKKVANGSEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEVLFCSLF 120
            R +++GFKDY+L SALRDRRFPPIQ KELP LECTVSIL DYEIA  YLDWEV +C+ F
Sbjct: 61  PRQIVSGFKDYSLTSALRDRRFPPIQSKELPTLECTVSILTDYEIAEGYLDWEV-YCTPF 120

Query: 121 LIKENALPLWLARIGRARCLILASLPEILSLVLSCLPVVFLVGKHGIIIEFNDPDYNTRR 180
               +      A +    CL+         L  +   +V  VGKHG+IIEF DP+YN RR
Sbjct: 121 EATCSD-----ALLTHLLCLLFQQF-----LHQNLFFLVNQVGKHGLIIEFTDPEYNIRR 180

Query: 181 SATYLPEVAAHEGWTKIEAIDSLVRKAGYNGAITESLRKRIRLTRYQSTLFTMHYGEYVS 240
           SATYLPEVA HEGWT  E IDSL+RKAGY G ITESLRK+I++TRYQSTL TMHYGEYV+
Sbjct: 181 SATYLPEVAGHEGWTHAETIDSLMRKAGYQGTITESLRKKIKVTRYQSTLCTMHYGEYVA 240

Query: 241 YVKTTRGTTPCVVGAKA 258
           Y+K  RG  P + G  A
Sbjct: 241 YLKKNRGAAPSISGVPA 246

BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|720050025|ref|XP_010271633.1| (PREDICTED: uncharacterized protein At2g38710-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 259.6 bits (662), Expect = 5.7e-66
Identity = 140/252 (55.56%), Postives = 159/252 (63.10%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSAN+EMVVYCFDTL+AHYN EEAPPPAFD  QHPLFVTWKK+VNGGEPRLRGCIGTLE
Sbjct: 1   MVSANQEMVVYCFDTLVAHYNSEEAPPPAFDAEQHPLFVTWKKLVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEVLFCSLF 120
           ARCL                                ++   DY +     D     C   
Sbjct: 61  ARCL--------------------------------INGFRDYALTSALRD-----CRFP 120

Query: 121 LIKENALPLWLARIGRARCLILASLPEILSLVLSCLPVVFLVGKHGIIIEFNDPDYNTRR 180
           LI+   LP     +      IL +    L+ +       + +G HG+ IEF DPDYN RR
Sbjct: 121 LIQPQELPYLECTVS-----ILTNYETALNYL------DWEIGTHGLTIEFTDPDYNVRR 180

Query: 181 SATYLPEVAAHEGWTKIEAIDSLVRKAGYNGAITESLRKRIRLTRYQSTLFTMHYGEYVS 240
           SATYLPEVAAHEGWTK+E IDSL+RKAGYNG I ESLRKRIRLTRYQST++TMHY +Y S
Sbjct: 181 SATYLPEVAAHEGWTKVETIDSLMRKAGYNGIINESLRKRIRLTRYQSTIYTMHYNDYTS 204

Query: 241 YVKTTRGTTPCV 253
           YVK TRG  P V
Sbjct: 241 YVKRTRGAAPTV 204

BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|449446293|ref|XP_004140906.1| (PREDICTED: uncharacterized protein At2g38710 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYEIA NYLDWEV
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWEV 114

BLAST of CmoCh15G005320 vs. NCBI nr
Match: gi|659113496|ref|XP_008456604.1| (PREDICTED: uncharacterized protein At2g38710 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 112/114 (98.25%), Postives = 113/114 (99.12%), Query Frame = 1

Query: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWEV 115
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYEIA NYLDWEV
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWEV 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AMERL_ARATH2.8e-5281.58Uncharacterized protein At2g38710 OS=Arabidopsis thaliana GN=At2g38710 PE=2 SV=1[more]
AMERL_HUMAN3.8e-2552.29AMMECR1-like protein OS=Homo sapiens GN=AMMECR1L PE=1 SV=1[more]
AMERL_MOUSE3.8e-2552.29AMMECR1-like protein OS=Mus musculus GN=Ammecr1l PE=1 SV=1[more]
AMERL_PONAB3.8e-2552.29AMMECR1-like protein OS=Pongo abelii GN=AMMECR1L PE=2 SV=1[more]
AMMR1_PONAB3.2e-2450.46AMME syndrome candidate gene 1 protein homolog OS=Pongo abelii GN=AMMECR1 PE=2 S... [more]
Match NameE-valueIdentityDescription
I1QW66_ORYGL5.7e-8964.71Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1[more]
Q7XBY9_ORYSJ2.2e-8864.31Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g42250 PE=4 SV=2[more]
A0A0A0KCF5_CUCSA7.8e-6298.25Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046200 PE=4 SV=1[more]
A0A103YIC7_CYNCS8.3e-5688.60AMMECR1-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012004 PE=4 SV=... [more]
A0A061FQA5_THECC1.9e-5590.35AMMECR1 family OS=Theobroma cacao GN=TCM_044221 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G38710.11.6e-5381.58 AMMECR1 family[more]
Match NameE-valueIdentityDescription
gi|1002302466|ref|XP_015614613.1|3.1e-8864.31PREDICTED: uncharacterized protein At2g38710 isoform X1 [Oryza sativa Japonica G... [more]
gi|992280776|gb|KXG38863.1|1.5e-8764.59hypothetical protein SORBI_001G289400 [Sorghum bicolor][more]
gi|720050025|ref|XP_010271633.1|5.7e-6655.56PREDICTED: uncharacterized protein At2g38710-like isoform X1 [Nelumbo nucifera][more]
gi|449446293|ref|XP_004140906.1|1.1e-6198.25PREDICTED: uncharacterized protein At2g38710 [Cucumis sativus][more]
gi|659113496|ref|XP_008456604.1|1.1e-6198.25PREDICTED: uncharacterized protein At2g38710 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002733AMMECR1_domain
IPR023473AMMECR1
IPR027485AMMECR1_N
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009651 response to salt stress
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G005320.1CmoCh15G005320.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002733AMMECR1 domainPFAMPF01871AMMECR1coord: 10..230
score: 2.5
IPR002733AMMECR1 domainPROFILEPS51112AMMECR1coord: 1..242
score: 23
IPR002733AMMECR1 domainunknownSSF143447AMMECR1-likecoord: 157..244
score: 5.62E-19coord: 4..120
score: 4.05
IPR023473AMMECR1PANTHERPTHR13016AMMECR1 HOMOLOGcoord: 1..108
score: 4.0E-101coord: 157..250
score: 4.0E
IPR027485AMMECR1, N-terminalGENE3DG3DSA:3.30.700.20coord: 4..114
score: 5.6
NoneNo IPR availableGENE3DG3DSA:3.30.1490.150coord: 162..227
score: 5.2