CmoCh15G004080 (gene) Cucurbita moschata (Rifu)

NameCmoCh15G004080
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr15 : 1860578 .. 1861130 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAGGCGTGAAGATGTTCTCTCTGTTTCCATGGCAGCTTTAGCTTTATCCTGTCCTTTGGTTCTTTTAGCTTTATCTCTCATCTCATCTATGGGAGAAACAAAGGCCAAAAAAAGAGAGAAAATTAGAGAGAGATTCCAATTTGTGTGTTTTTTTCTAGGTTATAACCCCTCACGTTCTTCCATATGTGCTCAATCATACGTAACTTAGATACTCCTTCACCATTTTTAGTACTCGTTTTTTCTTATACTAATACCGAATCAAACTATTTTCGTTGAAATGAATTTAAAGAGAGAATTTGAATCTCCTAAAAGTTAATATAACTTCGAAGACAAACCCTAATCTTAAGAACCCTAACGAGGATCTGCCCCTATTACGCACGTGTTTTGAATTTGTAACAAATGGGTAACGTGTAAAAGAGAAGACAAATACATATCCGACTCATTAAAGTGAAAGTGGAAGTGGGTTTGAACTTTTAACCCGTAAGAACGAATGCACATCAGATCCATCAAACTTAGGGTATATTGACGAGTATCTCGTTTCGTCATAA

mRNA sequence

ATGCATAGGCGTGAAGATGTTCTCTCTGTTTCCATGGCAGCTTTAGCTTTATCCTGTCCTTTGGTTATAACCCCTCACGTTCTTCCATATGTGCTCAATCATACTGAAAGTGGAAGTGGGTTTGAACTTTTAACCCGTAAGAACGAATGCACATCAGATCCATCAAACTTAGGGTATATTGACGAGTATCTCGTTTCGTCATAA

Coding sequence (CDS)

ATGCATAGGCGTGAAGATGTTCTCTCTGTTTCCATGGCAGCTTTAGCTTTATCCTGTCCTTTGGTTATAACCCCTCACGTTCTTCCATATGTGCTCAATCATACTGAAAGTGGAAGTGGGTTTGAACTTTTAACCCGTAAGAACGAATGCACATCAGATCCATCAAACTTAGGGTATATTGACGAGTATCTCGTTTCGTCATAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G004080.1CmoCh15G004080.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G004080Bottle gourd (USVL1VR-Ls)cmolsiB260
CmoCh15G004080Bottle gourd (USVL1VR-Ls)cmolsiB261
CmoCh15G004080Bottle gourd (USVL1VR-Ls)cmolsiB273
CmoCh15G004080Cucumber (Gy14) v2cgybcmoB462
CmoCh15G004080Cucumber (Gy14) v2cgybcmoB585
CmoCh15G004080Melon (DHL92) v3.6.1cmomedB271
CmoCh15G004080Melon (DHL92) v3.6.1cmomedB289
CmoCh15G004080Melon (DHL92) v3.6.1cmomedB310
CmoCh15G004080Silver-seed gourdcarcmoB0362
CmoCh15G004080Silver-seed gourdcarcmoB0916
CmoCh15G004080Silver-seed gourdcarcmoB0936
CmoCh15G004080Cucumber (Chinese Long) v3cmocucB0335
CmoCh15G004080Cucumber (Chinese Long) v3cmocucB0349
CmoCh15G004080Watermelon (97103) v2cmowmbB284
CmoCh15G004080Watermelon (97103) v2cmowmbB305
CmoCh15G004080Cucurbita moschata (Rifu)cmocmoB252
CmoCh15G004080Cucurbita moschata (Rifu)cmocmoB258
CmoCh15G004080Cucurbita moschata (Rifu)cmocmoB259
CmoCh15G004080Cucurbita moschata (Rifu)cmocmoB261
CmoCh15G004080Cucumber (Gy14) v1cgycmoB0466
CmoCh15G004080Cucumber (Gy14) v1cgycmoB0543
CmoCh15G004080Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G004080Cucurbita maxima (Rimu)cmacmoB689
CmoCh15G004080Cucurbita maxima (Rimu)cmacmoB692
CmoCh15G004080Wild cucumber (PI 183967)cmocpiB304
CmoCh15G004080Wild cucumber (PI 183967)cmocpiB297
CmoCh15G004080Cucumber (Chinese Long) v2cmocuB295
CmoCh15G004080Cucumber (Chinese Long) v2cmocuB288
CmoCh15G004080Melon (DHL92) v3.5.1cmomeB239
CmoCh15G004080Watermelon (Charleston Gray)cmowcgB233
CmoCh15G004080Watermelon (97103) v1cmowmB243
CmoCh15G004080Cucurbita pepo (Zucchini)cmocpeB266
CmoCh15G004080Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G004080Cucurbita pepo (Zucchini)cmocpeB277
CmoCh15G004080Cucurbita pepo (Zucchini)cmocpeB279