CmoCh15G000960 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G000960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Prohibitin, putative
Location	Cmo_Chr15 : 476245 .. 477582 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGATTGACGCAACATTCAGAGATGACGCAACATTCAGAGATTGACGCAAACGTACTTGACCCTCTCACTTCAAGATATAGCAAATACTGTTAAACTCAACAGTCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAACTTCAGAATCGCAGGATTATTCTATTAATCAGCATCCATCTCTAGTAATATCAGTTTTTGGTACAATTTTAGATCCAGGACGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGATTCATACTGTTTTCTTTAAATATATGGTCATCTGTACCAATTTCAAAGACCAATCCAGCTCAATTGTTCCGACTATTTCAAGATTTATCTCTTCTTGCAACCAGGAGCAGATTCTTTTAGCGCCTGAAAAATGTAAAGTTGTCTATGAGTTATTACTGTCATCCCTGCCCAAGCACTAACATCAGGTCTAACATCAGCTCTGACATCAGGTCGATGAGGAGTACTTAAAGGAGTACTTACTGTAACCGTAATCACCCGTTGGAGTGAGCATCCCTTCTCGGACGGCCTCTTTAGGCGTTGCACCGCCAACCCGCCTAAACACTATCCCGGTCTTCCTCCATCCCTTGCCTCTGTTGTCAGTGGGTGAAGATGTGAAGACCGCTACTGTGTGCCGAAAATTGTGTTTGGTTGAAAGGAGTTTGAACTTCCTCTTCTTCTGTTTTATAAAAGGTGTAGTGAGAAACACAAACTGCCTCTTCTTCTTCTGTTCTATAAATAAGTTCTATATAAATTCTAAACAACAA

mRNA sequence

ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACAGATTGACGCAAACGTACTTGACCCTCTCACTTCAAGATATAGCAAATACTGTTAAACTCAACAGTCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAACTTCAGAATCGCAGGATTATTCTATTAATCAGCATCCATCTCTAATCCAGGACGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGATTCATACTGTTTTCTTTAAATATATGGTCATCTGTACCAATTTCAAAGACCAATCCAGCTCAATTGTTCCGACTATTTCAAGATTTATCTCTTCTTGCAACCAGGAGCAGATTCTTTTAGCGCCTGAAAAATGTAAAGTTGTCTATGAGTTATTACTGTCATCCCTGCCCAAGCACTAACATCAGGTCTAACATCAGCTCTGACATCAGGTCGATGAGGAGTACTTAAAGGAGTACTTACTGTAACCGTAATCACCCGTTGGAGTGAGCATCCCTTCTCGGACGGCCTCTTTAGGCGTTGCACCGCCAACCCGCCTAAACACTATCCCGGTCTTCCTCCATCCCTTGCCTCTGTTGTCAGTGGGTGAAGATGTGAAGACCGCTACTGTGTGCCGAAAATTGTGTTTGGTTGAAAGGAGTTTGAACTTCCTCTTCTTCTGTTTTATAAAAGGTGTAGTGAGAAACACAAACTGCCTCTTCTTCTTCTGTTCTATAAATAAGTTCTATATAAATTCTAAACAACAA

Coding sequence (CDS)

ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACAGATTGACGCAAACGTACTTGACCCTCTCACTTCAAGATATAGCAAATACTGTTAAACTCAACAGTCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAACTTCAGAATCGCAGGATTATTCTATTAATCAGCATCCATCTCTAATCCAGGACGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGATTCATACTGTTTTCTTTAAATATATGGTCATCTGTACCAATTTCAAAGACCAATCCAGCTCAATTGTTCCGACTATTTCAAGATTTATCTCTTCTTGCAACCAGGAGCAGATTCTTTTAGCGCCTGAAAAATGTAAAGTTGTCTATGAGTTATTACTGTCATCCCTGCCCAAGCACTAA

Homology

[Close]

BLAST of CmoCh15G000960 vs. Swiss-Prot
Match: PHB4_ARATH (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana GN=PHB4 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.7e-32
Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+GV ++ +N+S+YTV  GERAV+F  F G  D T VGEGTHF IP+LQ P
Sbjct: 11  LTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQT-VGEGTHFLIPYLQTP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            I++IR +P+TFS  S TKD Q V LT+RVLF P++  LP+  QT         LPSI +
Sbjct: 71  HIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+ F + +L+     VSAL+R+AL  RA E +I LD
Sbjct: 131 EVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELD 171

[Close]

BLAST of CmoCh15G000960 vs. Swiss-Prot
Match: PHB3_ARATH (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31
Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           L+ +A  A G+G  ++V+N S++TV  GERAVIF  F G  D T VGEGTHF IP LQ+P
Sbjct: 11  LSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQT-VGEGTHFLIPILQRP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            IF+IR +P+TFS +S TKD Q V LT+RVL  P++  LP+  QT         LPSI +
Sbjct: 71  HIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. Swiss-Prot
Match: PHB1_DICDI (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.0e-26
Identity = 80/204 (39.22%), Postives = 122/204 (59.80%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           L K+   A+ VG   S+  +SMYTV  G+RAVIF    G  + + VGEGTHF +PWLQKP
Sbjct: 5   LNKLIPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKS-VGEGTHFIMPWLQKP 64

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR  P      + +KD Q V++TVRVLF PD+ +LP         ++ + LPS+ +
Sbjct: 65  IIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGN 124

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYRLTQTYLTLSLQDIANT 192
           + L +VV+++ + EL+     VS  IRE+L  RA E +++LD  ++ T+L+ S QD  N 
Sbjct: 125 EVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLD-DVSITHLSFS-QDFTNA 184

Query: 193 V--KLNSPKEAEMHVLQMVTSESQ 206
           +  K  + +EAE     ++ +E +
Sbjct: 185 IEHKQVAQQEAERSKYIVMKNEQE 205

[Close]

BLAST of CmoCh15G000960 vs. Swiss-Prot
Match: PHB5_ARATH (Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 1


Query: 14  TKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPS 73
           +K    A+G+G   + V ++M+TV  G+RAV+FH F G  +   VGEGTH  IPW+QKP 
Sbjct: 4   SKFTKVALGLGAAIAAVRSTMFTVDGGQRAVMFHRFEGILEEP-VGEGTHRKIPWVQKPY 63

Query: 74  IFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSINHKDLDAVVSKF 133
           IF+IR +PY  +  S TKD Q V LT+RV+F PD+                 + AVV++F
Sbjct: 64  IFDIRTKPYKINTDSGTKDLQMVNLTLRVMFRPDV-----------------VKAVVAQF 123

Query: 134 TSHELVANLMDVSALIREALAARATESHIVLD 166
            + EL+     VSALIRE L  RA E +IVLD
Sbjct: 124 NADELLTERPQVSALIRETLIKRAKEFNIVLD 137

[Close]

BLAST of CmoCh15G000960 vs. Swiss-Prot
Match: PHB_CHICK (Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 70/199 (35.18%), Postives = 110/199 (55.28%), Query Frame = 1


Query: 16  VAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPSIF 75
           +  F +G+ V   VVN+++Y V  G RAVIF  F G  D T+VGEGTHF IPW+QKP IF
Sbjct: 9   IGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQD-TVVGEGTHFLIPWVQKPIIF 68

Query: 76  NIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINHKDL 135
           + R RP     ++ +KD Q V +T+R+LF P    LP         ++ + LPSI  + L
Sbjct: 69  DCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEIL 128

Query: 136 DAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYRLTQTYLTLSLQDIANTVKL 195
            +VV++F + EL+     VS  + E L  RA    ++LD  ++ T+LT   ++    V++
Sbjct: 129 KSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILD-DVSLTHLTFG-KEFTEAVEM 188

Query: 196 NSPKEAEMHVLQMVTSESQ 206
               + E    + +  +++
Sbjct: 189 KQVAQQEAERARFIVEKAE 204

[Close]

BLAST of CmoCh15G000960 vs. TrEMBL
Match: A0A068V834_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019119001 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 81/162 (50.00%), Postives = 113/162 (69.75%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G+ ++V+N+S+YTV  G+RAV+F  F G  D+T VGEGTHF IPWLQKP
Sbjct: 11  LTNIARAAFGLGIGATVLNSSLYTVDGGQRAVLFDRFRGVIDDT-VGEGTHFLIPWLQKP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS +S TKD Q V LT+RVL  P++P LP         ++ + LPSI +
Sbjct: 71  FIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPEVPRLPIIFKTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+R++L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRDSLVRRAKDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. TrEMBL
Match: A0A067LCY0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10176 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G  ++ +NAS+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 11  LTNLARAAFGLGAAATALNASLYTVDGGERAVLFDRFRGVIDTTI-GEGTHFLIPWLQKP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS VS TKD Q V LT+RVL HPD+  LP         ++ + LPSI +
Sbjct: 71  FIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSHPDVTKLPQIFQRLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +I+L+
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNILLE 171

[Close]

BLAST of CmoCh15G000960 vs. TrEMBL
Match: V4U3B1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015766mg PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G  ++V+N+S+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 80  LTNIARAAFGLGAAATVLNSSLYTVDGGERAVLFDRFRGVIDETI-GEGTHFLIPWLQKP 139

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS VS TKD Q V LT+RVL  P++  LP         ++ + LPSI +
Sbjct: 140 FIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGN 199

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 200 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLD 240

[Close]

BLAST of CmoCh15G000960 vs. TrEMBL
Match: A0A067DEH3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023231mg PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G  ++V+N+S+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 11  LTNIARAAFGLGAAATVLNSSLYTVDGGERAVLFDRFRGVIDETI-GEGTHFLIPWLQKP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS VS TKD Q V LT+RVL  P++  LP         ++ + LPSI +
Sbjct: 71  FIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. TrEMBL
Match: A0A067DIK0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023231mg PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G  ++V+N+S+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 11  LTNIARAAFGLGAAATVLNSSLYTVDGGERAVLFDRFRGVIDETI-GEGTHFLIPWLQKP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS VS TKD Q V LT+RVL  P++  LP         ++ + LPSI +
Sbjct: 71  FIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. TAIR10
Match: AT3G27280.2 (AT3G27280.2 prohibitin 4)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-33
Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+GV ++ +N+S+YTV  GERAV+F  F G  D T VGEGTHF IP+LQ P
Sbjct: 11  LTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQT-VGEGTHFLIPYLQTP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            I++IR +P+TFS  S TKD Q V LT+RVLF P++  LP+  QT         LPSI +
Sbjct: 71  HIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+ F + +L+     VSAL+R+AL  RA E +I LD
Sbjct: 131 EVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELD 171

[Close]

BLAST of CmoCh15G000960 vs. TAIR10
Match: AT5G40770.1 (AT5G40770.1 prohibitin 3)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-32
Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           L+ +A  A G+G  ++V+N S++TV  GERAVIF  F G  D T VGEGTHF IP LQ+P
Sbjct: 11  LSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQT-VGEGTHFLIPILQRP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            IF+IR +P+TFS +S TKD Q V LT+RVL  P++  LP+  QT         LPSI +
Sbjct: 71  HIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. TAIR10
Match: AT5G14300.1 (AT5G14300.1 prohibitin 5)

HSP 1 Score: 115.2 bits (287), Expect = 6.9e-26
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 1


Query: 14  TKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPS 73
           +K    A+G+G   + V ++M+TV  G+RAV+FH F G  +   VGEGTH  IPW+QKP 
Sbjct: 4   SKFTKVALGLGAAIAAVRSTMFTVDGGQRAVMFHRFEGILEEP-VGEGTHRKIPWVQKPY 63

Query: 74  IFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSINHKDLDAVVSKF 133
           IF+IR +PY  +  S TKD Q V LT+RV+F PD+                 + AVV++F
Sbjct: 64  IFDIRTKPYKINTDSGTKDLQMVNLTLRVMFRPDV-----------------VKAVVAQF 123

Query: 134 TSHELVANLMDVSALIREALAARATESHIVLD 166
            + EL+     VSALIRE L  RA E +IVLD
Sbjct: 124 NADELLTERPQVSALIRETLIKRAKEFNIVLD 137

[Close]

BLAST of CmoCh15G000960 vs. TAIR10
Match: AT2G20530.1 (AT2G20530.1 prohibitin 6)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-19
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 1


Query: 22  GVGVVSSVV---------NASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 81
           G GV+++VV           ++Y V  G RA++F+   G  D  +  EGTH  IPW ++P
Sbjct: 13  GGGVIAAVVIGGLSLYGATHTLYNVDGGHRAIVFNRLVGIKDK-VYPEGTHLMIPWFERP 72

Query: 82  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 141
            I+++R +PY     S ++D Q V + +RVL  P    LP         +  + LPSI H
Sbjct: 73  IIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEVYRSLGENYRERVLPSIIH 132

Query: 142 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+++ + +L+     VS  IR+ L  RA   HI LD
Sbjct: 133 ETLKAVVAQYNASQLITQRESVSREIRKILTLRAANFHIALD 173

[Close]

BLAST of CmoCh15G000960 vs. TAIR10
Match: AT1G03860.1 (AT1G03860.1 prohibitin 2)

HSP 1 Score: 88.2 bits (217), Expect = 9.1e-18
Identity = 55/153 (35.95%), Postives = 84/153 (54.90%), Query Frame = 1


Query: 22  GVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPSIFNIRVRP 81
           G+GV +  +  S+Y V  G RAV+F+   G  +  +  EGTHF +PW ++P I+++R RP
Sbjct: 26  GLGVYA--LTNSLYNVDGGHRAVMFNRLTGIKEK-VYPEGTHFMVPWFERPIIYDVRARP 85

Query: 82  YTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINHKDLDAVVSK 141
           Y     + + D Q V + +RVL  P    LP  ++T         LPSI H+ L AVV++
Sbjct: 86  YLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERVLPSIIHETLKAVVAQ 145

Query: 142 FTSHELVANLMDVSALIREALAARATESHIVLD 166
           + + +L+     VS  IR+ L  RA+   I LD
Sbjct: 146 YNASQLITQREAVSREIRKILTERASNFDIALD 175

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: gi|672178556|ref|XP_008809412.1| (PREDICTED: prohibitin-3, mitochondrial-like [Phoenix dactylifera])

HSP 1 Score: 151.0 bits (380), Expect = 3.2e-33
Identity = 85/162 (52.47%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A+G+GV +S+VNAS+YTV  GERAV+F  F G  D T VGEGTHF IPWLQKP
Sbjct: 13  LTNLARAAIGLGVGASLVNASLYTVDGGERAVLFDRFRGVLDET-VGEGTHFLIPWLQKP 72

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TF+  S TKD Q V LT+R+L  PD+P LP         ++ + LPSI +
Sbjct: 73  YIFDIRTRPHTFTSKSGTKDLQMVNLTLRLLSRPDVPRLPTIFTSLGTEYDEKVLPSIGN 132

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+R+AL  RA + +IVLD
Sbjct: 133 EVLKAVVAQFNADQLLTERPHVSALVRDALVRRARDFNIVLD 173

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: gi|1009151295|ref|XP_015893478.1| (PREDICTED: prohibitin-3, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 149.4 bits (376), Expect = 9.4e-33
Identity = 84/162 (51.85%), Postives = 112/162 (69.14%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A+G+GV +SVVN+S+YTV  G+RAV+F  F G  D T VGEGTHF IPWLQKP
Sbjct: 10  LTNIARGAIGLGVGASVVNSSLYTVDGGQRAVLFDRFRGVIDET-VGEGTHFLIPWLQKP 69

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS +S TKD Q V LT+RVL  P++  LP         ++ + LPSI +
Sbjct: 70  FIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPDIFKTLGLEYDEKVLPSIGN 129

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 130 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRAKDFNIVLD 170

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: gi|661879586|emb|CDP16659.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 148.3 bits (373), Expect = 2.1e-32
Identity = 81/162 (50.00%), Postives = 113/162 (69.75%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G+ ++V+N+S+YTV  G+RAV+F  F G  D+T VGEGTHF IPWLQKP
Sbjct: 11  LTNIARAAFGLGIGATVLNSSLYTVDGGQRAVLFDRFRGVIDDT-VGEGTHFLIPWLQKP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS +S TKD Q V LT+RVL  P++P LP         ++ + LPSI +
Sbjct: 71  FIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPEVPRLPIIFKTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+R++L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRDSLVRRAKDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: gi|802539452|ref|XP_012071130.1| (PREDICTED: prohibitin-3, mitochondrial [Jatropha curcas])

HSP 1 Score: 147.9 bits (372), Expect = 2.7e-32
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G  ++ +NAS+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 11  LTNLARAAFGLGAAATALNASLYTVDGGERAVLFDRFRGVIDTTI-GEGTHFLIPWLQKP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS VS TKD Q V LT+RVL HPD+  LP         ++ + LPSI +
Sbjct: 71  FIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSHPDVTKLPQIFQRLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +I+L+
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNILLE 171

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: gi|567909687|ref|XP_006447157.1| (hypothetical protein CICLE_v10015766mg [Citrus clementina])

HSP 1 Score: 147.1 bits (370), Expect = 4.7e-32
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+G  ++V+N+S+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 80  LTNIARAAFGLGAAATVLNSSLYTVDGGERAVLFDRFRGVIDETI-GEGTHFLIPWLQKP 139

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TFS VS TKD Q V LT+RVL  P++  LP         ++ + LPSI +
Sbjct: 140 FIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGN 199

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 200 EVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLD 240

The following BLAST results are available for this feature:

BLAST of CmoCh15G000960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHB4_ARATH	4.7e-32	50.00	Prohibitin-4, mitochondrial OS=Arabidopsis thaliana GN=PHB4 PE=1 SV=1	[more]
PHB3_ARATH	1.8e-31	49.38	Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1 SV=1	[more]
PHB1_DICDI	5.0e-26	39.22	Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1	[more]
PHB5_ARATH	1.2e-24	44.74	Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=3 SV=1	[more]
PHB_CHICK	1.2e-24	35.18	Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1	[more]

BLAST of CmoCh15G000960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A068V834_COFCA	1.5e-32	50.00	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019119001 PE=4 SV=1	[more]
A0A067LCY0_JATCU	1.9e-32	51.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10176 PE=4 SV=1	[more]
V4U3B1_9ROSI	3.3e-32	51.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015766mg PE=4 SV=1	[more]
A0A067DEH3_CITSI	3.3e-32	51.23	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023231mg PE=4 SV=1	[more]
A0A067DIK0_CITSI	3.3e-32	51.23	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023231mg PE=4 SV=1	[more]

BLAST of CmoCh15G000960 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27280.2	2.6e-33	50.00	prohibitin 4	[more]
AT5G40770.1	1.0e-32	49.38	prohibitin 3	[more]
AT5G14300.1	6.9e-26	44.74	prohibitin 5	[more]
AT2G20530.1	4.8e-19	34.57	prohibitin 6	[more]
AT1G03860.1	9.1e-18	35.95	prohibitin 2	[more]

BLAST of CmoCh15G000960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|672178556\|ref\|XP_008809412.1\|	3.2e-33	52.47	PREDICTED: prohibitin-3, mitochondrial-like [Phoenix dactylifera]	[more]
gi\|1009151295\|ref\|XP_015893478.1\|	9.4e-33	51.85	PREDICTED: prohibitin-3, mitochondrial [Ziziphus jujuba]	[more]
gi\|661879586\|emb\|CDP16659.1\|	2.1e-32	50.00	unnamed protein product [Coffea canephora]	[more]
gi\|802539452\|ref\|XP_012071130.1\|	2.7e-32	51.23	PREDICTED: prohibitin-3, mitochondrial [Jatropha curcas]	[more]
gi\|567909687\|ref\|XP_006447157.1\|	4.7e-32	51.23	hypothetical protein CICLE_v10015766mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000163	Prohibitin
IPR001107	Band_7
IPR011991	Winged helix-turn-helix DNA-binding domain

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G000960.1	CmoCh15G000960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000163	Prohibitin	PANTHER	PTHR23222	PROHIBITIN	coord: 1..165 score: 1.0
IPR001107	Band 7 domain	PFAM	PF01145	Band_7	coord: 36..173 score: 5.7
IPR001107	Band 7 domain	SMART	SM00244	PHB_4	coord: 32..192 score: 4.
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 155..211 score: 4.
None	No IPR available	PANTHER	PTHR23222:SF0	PROHIBITIN	coord: 1..165 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G000960	Cp4.1LG13g11270	Cucurbita pepo (Zucchini)	cmocpeB267
CmoCh15G000960	Cp4.1LG01g25500	Cucurbita pepo (Zucchini)	cmocpeB279
CmoCh15G000960	Carg06027	Silver-seed gourd	carcmoB0031

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G000960	CmoCh04G030780	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G000960	Watermelon (97103) v2	cmowmbB278
CmoCh15G000960	Wax gourd	cmowgoB0392
CmoCh15G000960	Cucumber (Gy14) v1	cgycmoB0366
CmoCh15G000960	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G000960	Cucurbita maxima (Rimu)	cmacmoB692
CmoCh15G000960	Wild cucumber (PI 183967)	cmocpiB305
CmoCh15G000960	Cucumber (Chinese Long) v2	cmocuB296
CmoCh15G000960	Melon (DHL92) v3.5.1	cmomeB258
CmoCh15G000960	Watermelon (Charleston Gray)	cmowcgB240
CmoCh15G000960	Watermelon (97103) v1	cmowmB274
CmoCh15G000960	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G000960	Bottle gourd (USVL1VR-Ls)	cmolsiB265
CmoCh15G000960	Cucumber (Gy14) v2	cgybcmoB722
CmoCh15G000960	Melon (DHL92) v3.6.1	cmomedB292
CmoCh15G000960	Cucumber (Chinese Long) v3	cmocucB0358