CmoCh15G000120 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTCTTTGCTGTAAATGTCAAGAACACCGCCACTCCTCCACCGCCCTTCTCACTCAAACACTCCTTTCCCGACAGACCCATTTCTTGCTCTTTGGCGAAGCCTTCGAGGAGATTTTCTTGTTCACATCCCTTTGGCGCTCAACTTCTCCGCCTGCTTGAGATCCGAGTATTCAGGCCCAGGATTTGCTCTCCCGTCTCTGTCTCTCGCTCCTTTCTGGTGAGAGCGATTGCGAAGAAGAATCAAGACAATTCTCCGTCTCCTGGTACTTATTTTCTTCCAGAATTCTTCGTTTCTTGGGGTTTGTTCGTCCCCAATTTCCTTCTGTTCTTGTTTGTTTAGGTTCTTTCACGTCATGGCTTCCGGATTTCTTTTGACATTCCATGGCCTTTTGCTCTGCTTGGTTATGATTGCTGGAAAGTATGATATAGTATTGATTGCAGAATCGTCTAAGTAAGCTCGAAACCTAAAATCAGGACATGACCTTTGGTAGCATCATGCTTCTCGGAGTTTCGGTACAGTTATGTAATACCAGCTTAGGACGAGCAAGTTTTCCTAATTAACATCATACGTTTTAGTTGCCCAGCTGCCAAATAAGCCCCTTGGTTATGCATGGTACTCGGTACTTTCTTCTGTTCTCGGGAGTCTTTTCCCCTTTGTAACTTGCTTTTGTATACTGGCCATCATAGTGTGTGGATCCTTCATTATTACCATTATCTTCAATTCTTCTCATTTTATGTGCTGTGTTGTTAAACTAATCCATTTCCCGAACTACCTTATTTTTTCCTCTTTAAAATGATATTTTGGTTGGAAAATCTTTTGTTTTTGGCATGTTTTCTTGCGGGTTCCCTACTCATTAATGTAATTAAAGAGTTGGGATATGATCCATGTTGGAAAATATTTAAGAACGATCAACTAAATGATAAAAGTCTTGTTTCTAGTAAGGTATTGTGGGGCTATGCACATTAGTTATAGAAAGTAAGCCGAAGGTTAATATATAAGTCAGACAGGCTCAAACTTAATCAATGCTAGTCAGAAGACATACACACCACCCTCAAGGCTGCAGGTGTGCGCATCCACAAAGATTGTATTGAGTGCTTCACGGCATGCTCCCCAATTCGTAACTATATACTATGGTGAGGAACCTTTATATTTTCACAGATGTGCCTATTTGGTATGGGTGTTTAGTTGTGAAAGCTTGTATATCTGCATTTAGAGGTAAATGAAGTCACTGAATTGTAGCTAATGAGAATAATAGTGGTCAAACGATTGTGATGAATCGACATGGACAAACATGCCCATCAACTAACAACCATCCACAGTCCACAGTCTTTGAATAGGTCTTTCCACACTCGAGTTTTGCCCCATGAAATTCATTCCTGAAAATTTCCTCTTCTTTCTAGTTCTTGTTGCTGGATCAATTTTGTTAGAAATTCCTGCGAAGAATATTTGATTTTCCCAATAAGATTAGTATGATGTCGTATCAATCTTCGAAAAAGTGTTGTATTTTGAGAGGAGGATGCTCTTGTCACTATAGCACTTAAAGACGAAATTCTTGTTTTGGAATTTTTCTTTGTGCATACCTCACTTCTCTTACAATCTCCATATTACTTATTACTCTGCTTGTTGTATTATTTTACTTTCTCTATCATAAGTCTGTTAAAAAATCTGGCGAGACTTCGCTCTTCTGGACAAGTGCCTATGGAAATTGGATGTTAGGGGATTTTTTTTTTCTTAACTTTCCATTTTTCAATCTAAAAATTGGTTGTTTGGCCCACTGGTGTGCTCATCCTGTTTGCTGCTTACAGTTTTGAGTTCCAGTCACATATCTTTCAAAGTTCAAAATCTAAAATTATACATGGTACTCCTTATAGATGGTTAGTCTTTGGTATTGTTTTTCGTCCCTCCATGCTTCTAATGCCATTTATACATTTGCTATGTTTTTATCCTCTGTGGCTCTGCACATGTCGAGGACAATCAACTTCTTCCTTTTTCTTTCTTTTTTTTATTTTTATTTTTATTATGTTCTACATGTGCTTTTTCCGCTCACTGCCTTAAGCTAACTGTTCTCAAAGATTTGTGTTTCTGCCTTCAACAATTGCTTGGAATTAAGGAATCATAGAAACATTGCAAGCCAATACTTCAACTGACCTCCAAAAAGTTATAAAAAGGAGGAAAATACGTTGTTTAGTGGTATATCTTAGTAGATGTTACTTCAGTGTTATGTTGGAGATAGCTATAGATTCGTGGGACTTCTCTACTTTGTGAAAAAAGGAAGGTTTGGTAACTGAAAAAGAACAAGCTTCTCCACTTTATGAAAGTTAGGTACCGCCATCCCCTTGGAGAGGCTCTGGATGTTTTAAATTAAAGTGAACTGTTTCACGGATCGTAGGTAGCTTCTCCTTATGAATATCATTCTAATATTATCATCTGTACTATTTGAGCTATTTTTTATCCTCTATGTTAATAGGACTCCTCTTACTATGTCTACCATGATAAATATCATTTTTTTTGTTTTGATTTCTTAAGTGCAGAAAATGGAGATCACTCAGTTCCTGGAGACGACGCTAAATCAAACAATATTTCTGATGCCAGCAAAAGTAATGAAACTTCTTCCAAGAAAGCGCATCATATTAATTTGGACTGGCGAGAATTCAGAGCAAACTTATTCTCACGCGAGCAGGTGATTTCTCATTCTTCTTTTTAAATCAAAATTGATCACACTCCTTATTAAGAAAGAGGTATAATTTTGTAATTATGAGATACCACGTCTCTAAGTTTTTACTCAGGGTAGAAACCTGCTCATATATGGCTAAAGTTGTATTGCAAAGTTCTGTCAAAGAGGTGTGAGAGCAAAAGTGATCTGAGTTCTCTAGTTTCAATTTTTTCTCCTGTTGGGTCCCGGTCCCCTGCTTTGTTTTATTTGTTTTTTGTCCTGCTTTCTATTATGGGTGTCCGACTGGAAATGCTATTTGTCGTCTTATTCTAGTATTATTATCGGATTGCTGAAGAACATGATCTCAAACAAAACAAGTTCAATGAAAGAAATGTAAACTCCAATGCAACTATTTTTTGTGGTGTGAATATTTTGCAGGCAGAAAAGGTCGAAGCTGACATGGACGTCCAGAGTGAAAATGCTCACGAGTCTAAGACTCTCGGCCTGAAGTGGGCACATCCTATTCCTGTACCTGAGACTGGCTGTGTCCTTGTTGCCACAGAGAAGTTGGACGGTGTTCGCACTTTTGAGCGAACAGTCATCCTTCTCCTCAGATCTGGAAGCAGACATCCTCAGGAGGGGCCGTTCGGGGTTGTGATTAACCGCCCACTCCACAAAAAGATCAAGCACATGAAACCAACCAATCTTGACCTAGCAACTACATTTTCTGATTGCTCCCTACACTTTGGGGGGCCTCTTGAGGCGAGCATGTTTTTGCTGAAAACAGGAGAAAAATCAAAACTACATGGGTTTGAAGAAGTGATCCCAGGCCTCTGCTTTGGCGCTCGAAACAGCCTCGATGAAGCTGCAGTGCTGGTGAAGAAGGGAATCCTTAAACCTCAGGACTTCAGATTCTTTGTGGGTTATGCTGGGTGGCAACTGGATCAATTGAGGGAGGAAATTGAATCAGATTACTGGTATGTGGCAGCTTGTAGCTCAAATCTAATCTGTGGAGGCGCATCAGATTCCTCATCAGAGGGACTGTGGGAGGAGATATTGCAATTGATGGGCGGTGACTATTCAGAGTTGAGCAGAAAGCCTAAGCAAGATATGTAGTTTTCTATATGAAGGAACATTAAAAATCTCTGAAGCTGAAGGTGTAATCAAAGTTGAAGCCATAAAAGCTGAAAGCCAAATGTACAGAAGTTAGCTGGCTTTTGAAATTTAGCAGACTTCATCTCTTTCTCTAAGGACAACAACGATCTCTTATAATACCTACTTATAAATGTAATTTATGTAGAGACAGTATTGTGTTGTGTTCACATTTGCTTGATCGATTCAAAATAGCTTTAGAATGTGTCTATATCTGATATTAATTCAAACTTTTACCGTACGGCGCATGGCCAGGGCTGCCAACGTAATACTCATCCCTTTTGTTATAAATGCAACTCCCAC ATGGATCTCTTTGCTGTAAATGTCAAGAACACCGCCACTCCTCCACCGCCCTTCTCACTCAAACACTCCTTTCCCGACAGACCCATTTCTTGCTCTTTGGCGAAGCCTTCGAGGAGATTTTCTTGTTCACATCCCTTTGGCGCTCAACTTCTCCGCCTGCTTGAGATCCGAGTATTCAGGCCCAGGATTTGCTCTCCCGTCTCTGTCTCTCGCTCCTTTCTGGTGAGAGCGATTGCGAAGAAGAATCAAGACAATTCTCCGTTCTTTCACGTCATGGCTTCCGGATTTCTTTTGACATTCCATGGCCTTTTGCTCTGCTTGGTTATGATTGCTGGAAAGTATGATATAGTATTGATTGCAGAATCGTCTAATTTTGAGTTCCAGTCACATATCTTTCAAAGTTCAAAATCTAAAATTATACATGAAAATGGAGATCACTCAGTTCCTGGAGACGACGCTAAATCAAACAATATTTCTGATGCCAGCAAAAGTAATGAAACTTCTTCCAAGAAAGCGCATCATATTAATTTGGACTGGCGAGAATTCAGAGCAAACTTATTCTCACGCGAGCAGGCAGAAAAGGTCGAAGCTGACATGGACGTCCAGAGTGAAAATGCTCACGAGTCTAAGACTCTCGGCCTGAAGTGGGCACATCCTATTCCTGTACCTGAGACTGGCTGTGTCCTTGTTGCCACAGAGAAGTTGGACGGTGTTCGCACTTTTGAGCGAACAGTCATCCTTCTCCTCAGATCTGGAAGCAGACATCCTCAGGAGGGGCCGTTCGGGGTTGTGATTAACCGCCCACTCCACAAAAAGATCAAGCACATGAAACCAACCAATCTTGACCTAGCAACTACATTTTCTGATTGCTCCCTACACTTTGGGGGGCCTCTTGAGGCGAGCATGTTTTTGCTGAAAACAGGAGAAAAATCAAAACTACATGGGTTTGAAGAAGTGATCCCAGGCCTCTGCTTTGGCGCTCGAAACAGCCTCGATGAAGCTGCAGTGCTGGTGAAGAAGGGAATCCTTAAACCTCAGGACTTCAGATTCTTTGTGGGTTATGCTGGGTGGCAACTGGATCAATTGAGGGAGGAAATTGAATCAGATTACTGGTATGTGGCAGCTTGTAGCTCAAATCTAATCTGTGGAGGCGCATCAGATTCCTCATCAGAGGGACTGTGGGAGGAGATATTGCAATTGATGGGCGGTGACTATTCAGAGTTGAGCAGAAAGCCTAAGCAAGATATGTAGTTTTCTATATGAAGGAACATTAAAAATCTCTGAAGCTGAAGGTGTAATCAAAGTTGAAGCCATAAAAGCTGAAAGCCAAATGTACAGAAGTTAGCTGGCTTTTGAAATTTAGCAGACTTCATCTCTTTCTCTAAGGACAACAACGATCTCTTATAATACCTACTTATAAATGTAATTTATGTAGAGACAGTATTGTGTTGTGTTCACATTTGCTTGATCGATTCAAAATAGCTTTAGAATGTGTCTATATCTGATATTAATTCAAACTTTTACCGTACGGCGCATGGCCAGGGCTGCCAACGTAATACTCATCCCTTTTGTTATAAATGCAACTCCCAC ATGGATCTCTTTGCTGTAAATGTCAAGAACACCGCCACTCCTCCACCGCCCTTCTCACTCAAACACTCCTTTCCCGACAGACCCATTTCTTGCTCTTTGGCGAAGCCTTCGAGGAGATTTTCTTGTTCACATCCCTTTGGCGCTCAACTTCTCCGCCTGCTTGAGATCCGAGTATTCAGGCCCAGGATTTGCTCTCCCGTCTCTGTCTCTCGCTCCTTTCTGGTGAGAGCGATTGCGAAGAAGAATCAAGACAATTCTCCGTTCTTTCACGTCATGGCTTCCGGATTTCTTTTGACATTCCATGGCCTTTTGCTCTGCTTGGTTATGATTGCTGGAAAGTATGATATAGTATTGATTGCAGAATCGTCTAATTTTGAGTTCCAGTCACATATCTTTCAAAGTTCAAAATCTAAAATTATACATGAAAATGGAGATCACTCAGTTCCTGGAGACGACGCTAAATCAAACAATATTTCTGATGCCAGCAAAAGTAATGAAACTTCTTCCAAGAAAGCGCATCATATTAATTTGGACTGGCGAGAATTCAGAGCAAACTTATTCTCACGCGAGCAGGCAGAAAAGGTCGAAGCTGACATGGACGTCCAGAGTGAAAATGCTCACGAGTCTAAGACTCTCGGCCTGAAGTGGGCACATCCTATTCCTGTACCTGAGACTGGCTGTGTCCTTGTTGCCACAGAGAAGTTGGACGGTGTTCGCACTTTTGAGCGAACAGTCATCCTTCTCCTCAGATCTGGAAGCAGACATCCTCAGGAGGGGCCGTTCGGGGTTGTGATTAACCGCCCACTCCACAAAAAGATCAAGCACATGAAACCAACCAATCTTGACCTAGCAACTACATTTTCTGATTGCTCCCTACACTTTGGGGGGCCTCTTGAGGCGAGCATGTTTTTGCTGAAAACAGGAGAAAAATCAAAACTACATGGGTTTGAAGAAGTGATCCCAGGCCTCTGCTTTGGCGCTCGAAACAGCCTCGATGAAGCTGCAGTGCTGGTGAAGAAGGGAATCCTTAAACCTCAGGACTTCAGATTCTTTGTGGGTTATGCTGGGTGGCAACTGGATCAATTGAGGGAGGAAATTGAATCAGATTACTGGTATGTGGCAGCTTGTAGCTCAAATCTAATCTGTGGAGGCGCATCAGATTCCTCATCAGAGGGACTGTGGGAGGAGATATTGCAATTGATGGGCGGTGACTATTCAGAGTTGAGCAGAAAGCCTAAGCAAGATATGTAG
BLAST of CmoCh15G000120 vs. Swiss-Prot
Match: Y1601_CHLCH (UPF0301 protein Cag_1601 OS=Chlorobium chlorochromatii (strain CaD3) GN=Cag_1601 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.2e-20 Identity = 54/173 (31.21%), Postives = 87/173 (50.29%), Query Frame = 1
BLAST of CmoCh15G000120 vs. Swiss-Prot
Match: Y637_CHLL7 (UPF0301 protein Plut_0637 OS=Chlorobium luteolum (strain DSM 273 / 2530) GN=Plut_0637 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.8e-19 Identity = 50/173 (28.90%), Postives = 87/173 (50.29%), Query Frame = 1
BLAST of CmoCh15G000120 vs. Swiss-Prot
Match: Y885_CHLPD (UPF0301 protein Cpha266_0885 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=Cpha266_0885 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.5e-19 Identity = 54/192 (28.12%), Postives = 95/192 (49.48%), Query Frame = 1
BLAST of CmoCh15G000120 vs. Swiss-Prot
Match: Y662_CHLP8 (UPF0301 protein Cpar_0662 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0662 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 8.5e-19 Identity = 54/192 (28.12%), Postives = 94/192 (48.96%), Query Frame = 1
BLAST of CmoCh15G000120 vs. Swiss-Prot
Match: Y663_CHLTE (UPF0301 protein CT0663 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) GN=CT0663 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.2e-18 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TrEMBL
Match: A0A0A0LMD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401250 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 2.2e-143 Identity = 280/416 (67.31%), Postives = 304/416 (73.08%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TrEMBL
Match: V4T3T5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020938mg PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 4.4e-131 Identity = 233/275 (84.73%), Postives = 252/275 (91.64%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TrEMBL
Match: V4VPK4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020938mg PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 4.4e-131 Identity = 233/275 (84.73%), Postives = 252/275 (91.64%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TrEMBL
Match: A0A059BUC5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02964 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 2.1e-125 Identity = 228/298 (76.51%), Postives = 255/298 (85.57%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TrEMBL
Match: A0A067LLJ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17242 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 3.6e-125 Identity = 222/297 (74.75%), Postives = 252/297 (84.85%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TAIR10
Match: AT1G33780.1 (AT1G33780.1 Protein of unknown function (DUF179)) HSP 1 Score: 412.1 bits (1058), Expect = 3.9e-115 Identity = 204/290 (70.34%), Postives = 240/290 (82.76%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TAIR10
Match: AT3G29240.1 (AT3G29240.1 Protein of unknown function (DUF179)) HSP 1 Score: 200.7 bits (509), Expect = 1.8e-51 Identity = 113/239 (47.28%), Postives = 142/239 (59.41%), Query Frame = 1
BLAST of CmoCh15G000120 vs. TAIR10
Match: AT3G19780.1 (AT3G19780.1 LOCATED IN: endomembrane system) HSP 1 Score: 80.5 bits (197), Expect = 2.7e-15 Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 1
BLAST of CmoCh15G000120 vs. NCBI nr
Match: gi|659081118|ref|XP_008441161.1| (PREDICTED: uncharacterized protein LOC103485383 isoform X1 [Cucumis melo]) HSP 1 Score: 541.2 bits (1393), Expect = 1.6e-150 Identity = 292/423 (69.03%), Postives = 315/423 (74.47%), Query Frame = 1
BLAST of CmoCh15G000120 vs. NCBI nr
Match: gi|659081120|ref|XP_008441162.1| (PREDICTED: uncharacterized protein LOC103485383 isoform X2 [Cucumis melo]) HSP 1 Score: 523.1 bits (1346), Expect = 4.5e-145 Identity = 252/275 (91.64%), Postives = 265/275 (96.36%), Query Frame = 1
BLAST of CmoCh15G000120 vs. NCBI nr
Match: gi|449441794|ref|XP_004138667.1| (PREDICTED: uncharacterized protein LOC101222789 [Cucumis sativus]) HSP 1 Score: 516.9 bits (1330), Expect = 3.2e-143 Identity = 280/416 (67.31%), Postives = 304/416 (73.08%), Query Frame = 1
BLAST of CmoCh15G000120 vs. NCBI nr
Match: gi|567898280|ref|XP_006441628.1| (hypothetical protein CICLE_v10020938mg [Citrus clementina]) HSP 1 Score: 476.1 bits (1224), Expect = 6.3e-131 Identity = 233/275 (84.73%), Postives = 252/275 (91.64%), Query Frame = 1
BLAST of CmoCh15G000120 vs. NCBI nr
Match: gi|567898282|ref|XP_006441629.1| (hypothetical protein CICLE_v10020938mg [Citrus clementina]) HSP 1 Score: 476.1 bits (1224), Expect = 6.3e-131 Identity = 233/275 (84.73%), Postives = 252/275 (91.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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