CmoCh14G018600 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCAAATAAACCTTAATTGTTTCCTATAAAGCCAAGGGGGCTGCTCCATCTCCCATTGCCCACACACACAAAAGCAACACAAAGTTCTGAACCATCACCAGCAGCAGCAACAGCCATGGGAGGCAGCGAGCAAGCCGATGTCGGTGTCGTCGACATTAGCCTAAAGGACCTCTCGTCGAAGCTCGAGGAGTTCGCCAAAGTCAGAAATTGGGAGAAGTATCATAGCCCCAGAAACCTTCTCCTCGCTATGGTCATTTTCTCTTCCTCTCCTCGTTCTTAACCATTGAACTATACTTACGTTGATTCTTGAAATCGAATTGTATGTATGATTGTAGGTCGGAGAAGTGGGAGAGCTATCGGAAATATTCCAATGGAGAGGGGAGGTGGAGAAAGGGCTGCCAGATTGGGAGGAATCGGATAAAGAGCATCTTGGGGAAGAACTTTCTGATGTGTTGCTTTATCTCATCAGATTGGCTGATATTTGTGGAATCAACCTGCCTGATGCTGCTACTAAGAAACTTGTAAAGAACTCCATCAAATACCCACCCCCATCCCAACCTCTTTAATTTGCCCCTTTTAACTCGTGCCCCTTTTAACTCGACTAGAGTTTCCATCGACACAGTACGCCACAGTAAAGTTTAAAATTTTCAATTTTTGTTAAATTATAAATTTAGTCGTCCTTATTATAATTAATCTATTACGAGATATTTAGAAATTTAGGTATAGGACAACCGAGCATTTAGAATTATGTAATTCATTTCTAGGTTGCATACCTAACAAATGTAGGACGTTAACGGTATGATACTACAATCGATTGACGCTTGGAA TGCCAAATAAACCTTAATTGTTTCCTATAAAGCCAAGGGGGCTGCTCCATCTCCCATTGCCCACACACACAAAAGCAACACAAAGTTCTGAACCATCACCAGCAGCAGCAACAGCCATGGGAGGCAGCGAGCAAGCCGATGTCGGTGTCGTCGACATTAGCCTAAAGGACCTCTCGTCGAAGCTCGAGGAGTTCGCCAAAGTCAGAAATTGGGAGAAGTATCATAGCCCCAGAAACCTTCTCCTCGCTATGGTCGGAGAAGTGGGAGAGCTATCGGAAATATTCCAATGGAGAGGGGAGGTGGAGAAAGGGCTGCCAGATTGGGAGGAATCGGATAAAGAGCATCTTGGGGAAGAACTTTCTGATGTGTTGCTTTATCTCATCAGATTGGCTGATATTTGTGGAATCAACCTGCCTGATGCTGCTACTAAGAAACTTGTAAAGAACTCCATCAAATACCCACCCCCATCCCAACCTCTTTAATTTGCCCCTTTTAACTCGTGCCCCTTTTAACTCGACTAGAGTTTCCATCGACACAGTACGCCACAGTAAAGTTTAAAATTTTCAATTTTTGTTAAATTATAAATTTAGTCGTCCTTATTATAATTAATCTATTACGAGATATTTAGAAATTTAGGTATAGGACAACCGAGCATTTAGAATTATGTAATTCATTTCTAGGTTGCATACCTAACAAATGTAGGACGTTAACGGTATGATACTACAATCGATTGACGCTTGGAA ATGGGAGGCAGCGAGCAAGCCGATGTCGGTGTCGTCGACATTAGCCTAAAGGACCTCTCGTCGAAGCTCGAGGAGTTCGCCAAAGTCAGAAATTGGGAGAAGTATCATAGCCCCAGAAACCTTCTCCTCGCTATGGTCGGAGAAGTGGGAGAGCTATCGGAAATATTCCAATGGAGAGGGGAGGTGGAGAAAGGGCTGCCAGATTGGGAGGAATCGGATAAAGAGCATCTTGGGGAAGAACTTTCTGATGTGTTGCTTTATCTCATCAGATTGGCTGATATTTGTGGAATCAACCTGCCTGATGCTGCTACTAAGAAACTTGTAAAGAACTCCATCAAATACCCACCCCCATCCCAACCTCTTTAA
BLAST of CmoCh14G018600 vs. Swiss-Prot
Match: DCTP1_RAT (dCTP pyrophosphatase 1 OS=Rattus norvegicus GN=Dctpp1 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.7e-23 Identity = 50/101 (49.50%), Postives = 70/101 (69.31%), Query Frame = 1
BLAST of CmoCh14G018600 vs. Swiss-Prot
Match: DCTP1_MOUSE (dCTP pyrophosphatase 1 OS=Mus musculus GN=Dctpp1 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.8e-23 Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 1
BLAST of CmoCh14G018600 vs. Swiss-Prot
Match: DCTP1_BOVIN (dCTP pyrophosphatase 1 OS=Bos taurus GN=DCTPP1 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.1e-22 Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 1
BLAST of CmoCh14G018600 vs. Swiss-Prot
Match: DCTP1_HUMAN (dCTP pyrophosphatase 1 OS=Homo sapiens GN=DCTPP1 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.1e-22 Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = 1
BLAST of CmoCh14G018600 vs. TrEMBL
Match: A0A0A0L514_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134910 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 5.9e-52 Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of CmoCh14G018600 vs. TrEMBL
Match: A0A0D2UV72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G176000 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 6.1e-49 Identity = 97/113 (85.84%), Postives = 107/113 (94.69%), Query Frame = 1
BLAST of CmoCh14G018600 vs. TrEMBL
Match: F6H8R5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01320 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 1.8e-48 Identity = 96/115 (83.48%), Postives = 106/115 (92.17%), Query Frame = 1
BLAST of CmoCh14G018600 vs. TrEMBL
Match: M1BG12_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400017214 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.5e-47 Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 1
BLAST of CmoCh14G018600 vs. TrEMBL
Match: K4CW56_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.0e-47 Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 1
BLAST of CmoCh14G018600 vs. TAIR10
Match: AT3G25400.1 (AT3G25400.1 NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518)) HSP 1 Score: 162.2 bits (409), Expect = 2.1e-40 Identity = 76/117 (64.96%), Postives = 95/117 (81.20%), Query Frame = 1
BLAST of CmoCh14G018600 vs. NCBI nr
Match: gi|449432542|ref|XP_004134058.1| (PREDICTED: dCTP pyrophosphatase 1-like [Cucumis sativus]) HSP 1 Score: 211.5 bits (537), Expect = 8.4e-52 Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of CmoCh14G018600 vs. NCBI nr
Match: gi|659076097|ref|XP_008438499.1| (PREDICTED: dCTP pyrophosphatase 1-like [Cucumis melo]) HSP 1 Score: 211.5 bits (537), Expect = 8.4e-52 Identity = 107/119 (89.92%), Postives = 109/119 (91.60%), Query Frame = 1
BLAST of CmoCh14G018600 vs. NCBI nr
Match: gi|823240846|ref|XP_012453030.1| (PREDICTED: dCTP pyrophosphatase 1-like [Gossypium raimondii]) HSP 1 Score: 201.4 bits (511), Expect = 8.7e-49 Identity = 97/113 (85.84%), Postives = 107/113 (94.69%), Query Frame = 1
BLAST of CmoCh14G018600 vs. NCBI nr
Match: gi|225433185|ref|XP_002281616.1| (PREDICTED: dCTP pyrophosphatase 1 [Vitis vinifera]) HSP 1 Score: 199.9 bits (507), Expect = 2.5e-48 Identity = 96/115 (83.48%), Postives = 106/115 (92.17%), Query Frame = 1
BLAST of CmoCh14G018600 vs. NCBI nr
Match: gi|697185637|ref|XP_009601857.1| (PREDICTED: dCTP pyrophosphatase 1-like [Nicotiana tomentosiformis]) HSP 1 Score: 199.1 bits (505), Expect = 4.3e-48 Identity = 95/107 (88.79%), Postives = 104/107 (97.20%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |