CmoCh14G017640 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G017640
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProteasome subunit beta type-2-A-like protein
LocationCmo_Chr14 : 13651057 .. 13653526 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCTCTTAAGAGTGAGAGAACTTGTTCTTCAAGTCGCTGCTGTAAAAGCATATAATTTCAGAAGGGGGGCTCTCCCGAATTTCACATAAGCTTTGTAAAAACCAGATCGATTTCAAGAAGAAGAACGAAGAAGAGAAATGGAGAGCGTATTTGGATTTGTTGGCAACGGATTCGTCATAGTGGCGGCTGACACATCGGCGGTGCATAGTATTTTGGTTCATAAATCCAACGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTTGCAGCTAGCGGCGAACCTGGCGACAGGTTTGAGGTTTTTGTTGATGGAAATCTTGTTTCTTCTCTAATCGTTTGCCTTTTGTTAATTATGTGTTTCTTTCGACTGTGATTCGATAGGGTTCAGTTCACGGAGTATATACAGAAGAATGTGGCTTTGTATCAGTTTCGCAATGGTATCCCTCTGACCTCTGCTGCTGCTGCTAATTTTACTCGCGGTGAACTCGCAACCGCCTTGCGGAAGGTAATATCATTTCTTCTTACTAAAACTTTTATTTGACTACATTTTCAACCTTTTAAGTTTTGGGAACTTTGGATCATGGGGGTTGTTTTAAGCGGTTCTAATAATTCATCGTGATGATGAAGTATGAATAGTTTTGTCTTCAATCTAACTTTTACTAGTTTGTGGAGCTTAGAACTGTTCAAATGTTTACAGAGCGAGGGAATATTGTCTTGGTTTGTTTTTTTCGAAACCCCTTGATTTCTGTCTTTCTGTCATCTTGAAGGATGCCTCACAATGGAAAGAAACTAGACCGATAACCATCTCCGGATGTTGTATGTTAAACACTTTGATTTGCGTTTTTGTTCTTGTATCCAGCTGTGTTGAGTGTAGGCAGGCCAAAGTTCATGTATTTCTCTTATATCATGTTTCGTCTTGCTATTATCATCATCCTATTGGTTCATTTCTTAGTATTAGGGATGGCATTTCATAATTCAGAAAGTTAACAATGATGAGCTTATGTATTGTACTCTACTTCTTGCCTGAGAAATAGAACCAAGCCTACCGATAGATATTGTCATCTCTGAGTTTTCCCTTTAAGGACTTCCCCGGAAGGGTTTAAAATGCTGCTGTTAGAGAAGGGTTTTCACACTCTTATAATGAATGTTTCGTACCTTTATAAGGAATGTTTTGTTCCCTTCTCCAACCGATATGGGATCTCATAATCTACTCCCTTGGTGGCCAGTGCCTCGCTGGCACTCCTCCCGATGTCTGGCTCTGATACCATTTGTAACAGCTCAATCCCATTATTAGTAGATAGTCCTTGTAACCTCATTTAATTTCACTAAATTCTGCTAGAAATGTGTTCGAATGTAATTTGATGTGTTGGTGGGCGAGATCGGGTTGGCTTTAAAATGGTATGGCATGTGATGTGGTGATGACTGCATAGAATACTAATGACTTTCATGAACGCTGGTTCGTGTTTACAAATGTACACTCTTATGTCTAGTTCTATGAAATCTTCCTTGATCTTGCTCCCCTAGCGTGCACAAGGGTGACGTCTCTTACTGAGTTGTCTGCTTCTCAAAGTACCAATTATCATGTTTCACCACTACAACTAAGTTTTTAGCCACTGGGGCACAAGTCTTTGTTCATTAAGGATAAGCTAGGCTCGATGTAGAACTCGTGTGAATAACGAGCCCATAAAAGAGGAGTTTTACTGTGTAATTTGGTTTTTGTGCTTAGAACATAATAATAAGTGATCCACTATTCTTCTTGTAATCCTGCATTTAGCTGTATCTTTGAATGAGCTGTAACTGTCTCCTGATTTCAATTGTGAGTTCTTGATTTTCAGAATCCATATTCTGTGAACATTCTTTTGGCGGGATATGACAAGGAGACAGGACCATCCCTGTTTTACATTGACTATATTGCCACCCTTCACAAGGTTGACAAGGGAGCTTTTGGTTATGGATCTTACTTTTCACTCTCCATGATGGATAGACACTACCATAGTGGTATGACAGAAGAAGAAGCTATTGATTTGGTTGATAAATGCATACTTGAGATCAGGTCCAGGCTTGTTGTGGCCCCACCGAACTTCGTTATCAAAATTGTAGACAAGAATGGAGCTAGGGAGGTTGCTTGGCGTCAATCCATCAAGGATGGAGCTAGCGTTCCTTCAGCTTAAGATTTAAATGTTATATCAGCAGAGGTTTGCTTTTCTTTCTGTCTTTTTTACTTTGTATGGGTAAAATACACCCTCTTCTGCTCTTGTTTCAGACAGTCTGATAGAGTAATGCTGTGGTTAACGTGAACACAATCTGAACTATAGATTGATTTATCATCTGCTGTACTGAAGTTCAAAGGTGCTATTTATGAATACATTCATATTTAGGTTGGCCTCACAAAGAATTGTTGGTAGTTTTTTCTTTGTTAAGTTAGAATCTGAAAAGCCAATCCTATTTGGGTGAACTTCCCTTCT

mRNA sequence

AGCCTCTTAAGAGTGAGAGAACTTGTTCTTCAAGTCGCTGCTGTAAAAGCATATAATTTCAGAAGGGGGGCTCTCCCGAATTTCACATAAGCTTTGTAAAAACCAGATCGATTTCAAGAAGAAGAACGAAGAAGAGAAATGGAGAGCGTATTTGGATTTGTTGGCAACGGATTCGTCATAGTGGCGGCTGACACATCGGCGGTGCATAGTATTTTGGTTCATAAATCCAACGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTTGCAGCTAGCGGCGAACCTGGCGACAGGGTTCAGTTCACGGAGTATATACAGAAGAATGTGGCTTTGTATCAGTTTCGCAATGGTATCCCTCTGACCTCTGCTGCTGCTGCTAATTTTACTCGCGGTGAACTCGCAACCGCCTTGCGGAAGAATCCATATTCTGTGAACATTCTTTTGGCGGGATATGACAAGGAGACAGGACCATCCCTGTTTTACATTGACTATATTGCCACCCTTCACAAGGTTGACAAGGGAGCTTTTGGTTATGGATCTTACTTTTCACTCTCCATGATGGATAGACACTACCATAGTGGTATGACAGAAGAAGAAGCTATTGATTTGGTTGATAAATGCATACTTGAGATCAGGTCCAGGCTTGTTGTGGCCCCACCGAACTTCGTTATCAAAATTGTAGACAAGAATGGAGCTAGGGAGGTTGCTTGGCGTCAATCCATCAAGGATGGAGCTAGCGTTCCTTCAGCTTAAGATTTAAATGTTATATCAGCAGAGGTTTGCTTTTCTTTCTGTCTTTTTTACTTTGTATGGGTAAAATACACCCTCTTCTGCTCTTGTTTCAGACAGTCTGATAGAGTAATGCTGTGGTTAACGTGAACACAATCTGAACTATAGATTGATTTATCATCTGCTGTACTGAAGTTCAAAGGTGCTATTTATGAATACATTCATATTTAGGTTGGCCTCACAAAGAATTGTTGGTAGTTTTTTCTTTGTTAAGTTAGAATCTGAAAAGCCAATCCTATTTGGGTGAACTTCCCTTCT

Coding sequence (CDS)

ATGGAGAGCGTATTTGGATTTGTTGGCAACGGATTCGTCATAGTGGCGGCTGACACATCGGCGGTGCATAGTATTTTGGTTCATAAATCCAACGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTTGCAGCTAGCGGCGAACCTGGCGACAGGGTTCAGTTCACGGAGTATATACAGAAGAATGTGGCTTTGTATCAGTTTCGCAATGGTATCCCTCTGACCTCTGCTGCTGCTGCTAATTTTACTCGCGGTGAACTCGCAACCGCCTTGCGGAAGAATCCATATTCTGTGAACATTCTTTTGGCGGGATATGACAAGGAGACAGGACCATCCCTGTTTTACATTGACTATATTGCCACCCTTCACAAGGTTGACAAGGGAGCTTTTGGTTATGGATCTTACTTTTCACTCTCCATGATGGATAGACACTACCATAGTGGTATGACAGAAGAAGAAGCTATTGATTTGGTTGATAAATGCATACTTGAGATCAGGTCCAGGCTTGTTGTGGCCCCACCGAACTTCGTTATCAAAATTGTAGACAAGAATGGAGCTAGGGAGGTTGCTTGGCGTCAATCCATCAAGGATGGAGCTAGCGTTCCTTCAGCTTAA
Homology
[Close]
BLAST of CmoCh14G017640 vs. Swiss-Prot
Match: PSB2A_ARATH (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1 PE=1 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 6.5e-97
Identity = 174/198 (87.88%), Postives = 188/198 (94.95%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGNGF IVAADTSAVHSIL+HK+NEDKIMVLDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNV+LY+FRNGIPLT+AAAANFTRGELATALRKNPYSVNIL+AGYD E+G SL+YIDYI
Sbjct: 61  QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSLS MDRHY S M+ EEAI+LVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKD 199
           IVDK+GAR+ AWRQS+KD
Sbjct: 181 IVDKDGARDYAWRQSVKD 198

[Close]
BLAST of CmoCh14G017640 vs. Swiss-Prot
Match: PSB2B_ARATH (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2 PE=1 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.2e-94
Identity = 170/198 (85.86%), Postives = 182/198 (91.92%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGNGF IVAADTSAVHSIL+HK+ EDKIM LDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNV+LYQFRNGIPL++AAAANFTRGELATALRKNPYSVNIL+AGYDKE G SL+YIDYI
Sbjct: 61  QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSLS MDRHY S M+ EEAI+LVDKCILEIRSRLV+APPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKD 199
           IVDK+GARE  WR S  D
Sbjct: 181 IVDKDGAREYGWRISTAD 198

[Close]
BLAST of CmoCh14G017640 vs. Swiss-Prot
Match: PSB2_ORYSJ (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica GN=PBD1 PE=2 SV=2)

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-79
Identity = 146/193 (75.65%), Postives = 165/193 (85.49%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME V G VG  F +VAADTSAV SILVHK++EDK+MVLDSHKL+ ASGEPGDRVQFTE+I
Sbjct: 1   MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKN+ LYQFRN IPL++AA ANFTRGELATALRKNPY VN+LLAGYD + G SL+YIDYI
Sbjct: 61  QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           AT HK++KGAFGYGSYF LS+MD+ Y   M+ EEA+DLVDKCI EIR RLVVAP NF+IK
Sbjct: 121 ATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIK 180

Query: 181 IVDKNGAREVAWR 194
           IVDK GARE A R
Sbjct: 181 IVDKEGAREYARR 193

[Close]
BLAST of CmoCh14G017640 vs. Swiss-Prot
Match: PSB2_DICDI (Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-46
Identity = 89/191 (46.60%), Postives = 132/191 (69.11%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME++  F   G V+  AD+S  HSI+  K +EDKI+ +D HKL+ ++GE GDRVQFTEYI
Sbjct: 1   METLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKET---GPSLFYI 120
            KN+ LY  RN  P+++ AAANF R ELAT++R +PYS+N++LAGYDKE    G SL+Y+
Sbjct: 61  SKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYM 120

Query: 121 DYIATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNF 180
           DY+ +L K++ G  GY SYF L ++DRH+   ++ E+ I+L+  C  E+++R +V+   +
Sbjct: 121 DYLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLEDGINLMHLCTTELKTRFLVS-GKY 180

Query: 181 VIKIVDKNGAR 189
            +K V   G +
Sbjct: 181 TLKFVSSEGIK 190

[Close]
BLAST of CmoCh14G017640 vs. Swiss-Prot
Match: PSB2_HUMAN (Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.4e-44
Identity = 87/191 (45.55%), Postives = 127/191 (66.49%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME + G  G  +V+VA+D  A  +I+  K + DK+  +    L+   GE GD VQF EYI
Sbjct: 1   MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALR-KNPYSVNILLAGYDKETGPSLFYIDY 120
           QKNV LY+ RNG  L+  AAANFTR  LA  LR + PY VN+LLAGYD+  GP+L+Y+DY
Sbjct: 61  QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120

Query: 121 IATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVI 180
           +A L K    A GYG++ +LS++DR+Y   ++ E A++L+ KC+ E++ R ++  P F +
Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSV 180

Query: 181 KIVDKNGAREV 191
           +I+DKNG  ++
Sbjct: 181 RIIDKNGIHDL 191

[Close]
BLAST of CmoCh14G017640 vs. TrEMBL
Match: A0A0A0LA70_CUCSA (Proteasome subunit beta type OS=Cucumis sativus GN=Csa_3G146470 PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 4.9e-107
Identity = 196/205 (95.61%), Postives = 202/205 (98.54%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           MESVFG VGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTR ELATALRKNPYSVNILLAGYDKETGPSL+Y+DYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRSELATALRKNPYSVNILLAGYDKETGPSLYYVDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKV+KGAFGYGSYFSL+MMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASVPSA 206
           IVDKNGAREVAWR+SIKDG SVPSA
Sbjct: 181 IVDKNGAREVAWRESIKDGVSVPSA 205

[Close]
BLAST of CmoCh14G017640 vs. TrEMBL
Match: A0A0D2S1H9_GOSRA (Proteasome subunit beta type OS=Gossypium raimondii GN=B456_006G240900 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.0e-101
Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFGFVGNGF +VAADTSAVHSILVHKSNEDKIMVLDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGFVGNGFAVVAADTSAVHSILVHKSNEDKIMVLDSHKLIAASGESGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPY VNILLAGYDKETGPSL+YIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYFVNILLAGYDKETGPSLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMT EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGA 201
           IVDK+GARE AWR+S+KD A
Sbjct: 181 IVDKDGAREYAWRESVKDAA 200

[Close]
BLAST of CmoCh14G017640 vs. TrEMBL
Match: A0A0B0N620_GOSAR (Proteasome subunit beta type OS=Gossypium arboreum GN=F383_12587 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.0e-101
Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFGFVGNGF +VAADTSAVHSILVHKSNEDKIMVLDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGFVGNGFAVVAADTSAVHSILVHKSNEDKIMVLDSHKLIAASGESGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPY VNILLAGYDKETGPSL+YIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYFVNILLAGYDKETGPSLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMT EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGA 201
           IVDK+GARE AWR+S+KD A
Sbjct: 181 IVDKDGAREYAWRESVKDAA 200

[Close]
BLAST of CmoCh14G017640 vs. TrEMBL
Match: A0A0B0NXY2_GOSAR (Proteasome subunit beta type OS=Gossypium arboreum GN=F383_23975 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.2e-100
Identity = 187/205 (91.22%), Postives = 196/205 (95.61%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGN F IVAADTSAVHSILVHKSNEDKIM+LDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGLVGNDFAIVAADTSAVHSILVHKSNEDKIMILDSHKLIAASGESGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPY VNILLAGYDKETGPSLFYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYFVNILLAGYDKETGPSLFYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSL+MMDRHYHSGMT EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLAMMDRHYHSGMTVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASVPSA 206
           IVDK+GARE AWR+S+KD A+VPSA
Sbjct: 181 IVDKDGAREYAWRESVKD-AAVPSA 204

[Close]
BLAST of CmoCh14G017640 vs. TrEMBL
Match: A0A061ELN0_THECC (Proteasome subunit beta type OS=Theobroma cacao GN=TCM_020662 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-100
Identity = 186/205 (90.73%), Postives = 195/205 (95.12%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGNGF IVAADTSAVHSILVHKSNEDKIM+LDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILVHKSNEDKIMILDSHKLIAASGESGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPY VNILLAGYDKETGPSL+YIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYFVNILLAGYDKETGPSLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSL+MMDRHYHSGMT EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLAMMDRHYHSGMTVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASVPSA 206
           IVDK+GARE AWR+S+KD A V SA
Sbjct: 181 IVDKDGAREYAWRESVKD-AEVASA 204

[Close]
BLAST of CmoCh14G017640 vs. TAIR10
Match: AT3G22630.1 (AT3G22630.1 20S proteasome beta subunit D1)

HSP 1 Score: 354.8 bits (909), Expect = 3.7e-98
Identity = 174/198 (87.88%), Postives = 188/198 (94.95%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGNGF IVAADTSAVHSIL+HK+NEDKIMVLDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNV+LY+FRNGIPLT+AAAANFTRGELATALRKNPYSVNIL+AGYD E+G SL+YIDYI
Sbjct: 61  QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSLS MDRHY S M+ EEAI+LVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKD 199
           IVDK+GAR+ AWRQS+KD
Sbjct: 181 IVDKDGARDYAWRQSVKD 198

[Close]
BLAST of CmoCh14G017640 vs. TAIR10
Match: AT4G14800.2 (AT4G14800.2 20S proteasome beta subunit D2)

HSP 1 Score: 334.7 bits (857), Expect = 3.9e-92
Identity = 170/214 (79.44%), Postives = 182/214 (85.05%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGNGF IVAADTSAVHSIL+HK+ EDKIM LDSHKLVAASGEPGDRVQFTEY+
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRK----------------NPYSVNILLA 120
           QKNV+LYQFRNGIPL++AAAANFTRGELATALRK                NPYSVNIL+A
Sbjct: 61  QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKEFCATFQGYSDFCVLMNPYSVNILMA 120

Query: 121 GYDKETGPSLFYIDYIATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCIL 180
           GYDKE G SL+YIDYIATLHKVDKGAFGYGSYFSLS MDRHY S M+ EEAI+LVDKCIL
Sbjct: 121 GYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCIL 180

Query: 181 EIRSRLVVAPPNFVIKIVDKNGAREVAWRQSIKD 199
           EIRSRLV+APPNFVIKIVDK+GARE  WR S  D
Sbjct: 181 EIRSRLVIAPPNFVIKIVDKDGAREYGWRISTAD 214

[Close]
BLAST of CmoCh14G017640 vs. NCBI nr
Match: gi|659076383|ref|XP_008438650.1| (PREDICTED: proteasome subunit beta type-2-A [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-107
Identity = 197/205 (96.10%), Postives = 203/205 (99.02%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           MESVFG VGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPYSVN+LLAGYDKETGPSL+YIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNVLLAGYDKETGPSLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKV+KGAFGYGSYFSL+MMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASVPSA 206
           IVDKNGAREVAWR+SIKDG SVPSA
Sbjct: 181 IVDKNGAREVAWRESIKDGVSVPSA 205

[Close]
BLAST of CmoCh14G017640 vs. NCBI nr
Match: gi|778678444|ref|XP_011650969.1| (PREDICTED: proteasome subunit beta type-2-A [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 7.0e-107
Identity = 196/205 (95.61%), Postives = 202/205 (98.54%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           MESVFG VGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI
Sbjct: 1   MESVFGLVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTR ELATALRKNPYSVNILLAGYDKETGPSL+Y+DYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRSELATALRKNPYSVNILLAGYDKETGPSLYYVDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKV+KGAFGYGSYFSL+MMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVEKGAFGYGSYFSLAMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASVPSA 206
           IVDKNGAREVAWR+SIKDG SVPSA
Sbjct: 181 IVDKNGAREVAWRESIKDGVSVPSA 205

[Close]
BLAST of CmoCh14G017640 vs. NCBI nr
Match: gi|1009141266|ref|XP_015888103.1| (PREDICTED: proteasome subunit beta type-2-B [Ziziphus jujuba])

HSP 1 Score: 376.3 bits (965), Expect = 3.3e-101
Identity = 186/202 (92.08%), Postives = 194/202 (96.04%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGNGF IVAADTSAVHSILVHKSNEDKIMVLDSHKL+AASGEPGDRVQFTEYI
Sbjct: 1   MECVFGLVGNGFAIVAADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPYSVNILLAGYDKETGPSL+YIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSL+MMDRHYHSGM+ EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLAMMDRHYHSGMSVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASV 203
           IVDK+GARE AWR+SIKD   V
Sbjct: 181 IVDKDGAREYAWRESIKDAGFV 202

[Close]
BLAST of CmoCh14G017640 vs. NCBI nr
Match: gi|823178574|ref|XP_012487182.1| (PREDICTED: proteasome subunit beta type-2-A [Gossypium raimondii])

HSP 1 Score: 375.9 bits (964), Expect = 4.4e-101
Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFGFVGNGF +VAADTSAVHSILVHKSNEDKIMVLDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGFVGNGFAVVAADTSAVHSILVHKSNEDKIMVLDSHKLIAASGESGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPY VNILLAGYDKETGPSL+YIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYFVNILLAGYDKETGPSLYYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMT EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGA 201
           IVDK+GARE AWR+S+KD A
Sbjct: 181 IVDKDGAREYAWRESVKDAA 200

[Close]
BLAST of CmoCh14G017640 vs. NCBI nr
Match: gi|728839870|gb|KHG19313.1| (Proteasome subunit beta type-2-A -like protein [Gossypium arboreum])

HSP 1 Score: 374.0 bits (959), Expect = 1.7e-100
Identity = 187/205 (91.22%), Postives = 196/205 (95.61%), Query Frame = 1 

Query: 1   MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYI 60
           ME VFG VGN F IVAADTSAVHSILVHKSNEDKIM+LDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGLVGNDFAIVAADTSAVHSILVHKSNEDKIMILDSHKLIAASGESGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYI 120
           QKNVALYQFRNGIPLT+AAAANFTRGELATALRKNPY VNILLAGYDKETGPSLFYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYFVNILLAGYDKETGPSLFYIDYI 120

Query: 121 ATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIK 180
           ATLHKVDKGAFGYGSYFSL+MMDRHYHSGMT EEAIDLVDKCI+EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKVDKGAFGYGSYFSLAMMDRHYHSGMTVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKNGAREVAWRQSIKDGASVPSA 206
           IVDK+GARE AWR+S+KD A+VPSA
Sbjct: 181 IVDKDGAREYAWRESVKD-AAVPSA 204

The following BLAST results are available for this feature:
BLAST of CmoCh14G017640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSB2A_ARATH6.5e-9787.88Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1 PE=1 SV=1[more]
PSB2B_ARATH5.2e-9485.86Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2 PE=1 SV=1[more]
PSB2_ORYSJ1.2e-7975.65Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica GN=PBD1 PE=2 SV=2[more]
PSB2_DICDI4.0e-4646.60Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2 PE=3 SV=1[more]
PSB2_HUMAN8.4e-4445.55Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1[more]
BLAST of CmoCh14G017640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA70_CUCSA4.9e-10795.61Proteasome subunit beta type OS=Cucumis sativus GN=Csa_3G146470 PE=3 SV=1[more]
A0A0D2S1H9_GOSRA3.0e-10192.50Proteasome subunit beta type OS=Gossypium raimondii GN=B456_006G240900 PE=3 SV=1[more]
A0A0B0N620_GOSAR3.0e-10192.50Proteasome subunit beta type OS=Gossypium arboreum GN=F383_12587 PE=3 SV=1[more]
A0A0B0NXY2_GOSAR1.2e-10091.22Proteasome subunit beta type OS=Gossypium arboreum GN=F383_23975 PE=3 SV=1[more]
A0A061ELN0_THECC4.4e-10090.73Proteasome subunit beta type OS=Theobroma cacao GN=TCM_020662 PE=3 SV=1[more]
BLAST of CmoCh14G017640 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22630.13.7e-9887.88 20S proteasome beta subunit D1[more]
AT4G14800.23.9e-9279.44 20S proteasome beta subunit D2[more]
BLAST of CmoCh14G017640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076383|ref|XP_008438650.1|1.4e-10796.10PREDICTED: proteasome subunit beta type-2-A [Cucumis melo][more]
gi|778678444|ref|XP_011650969.1|7.0e-10795.61PREDICTED: proteasome subunit beta type-2-A [Cucumis sativus][more]
gi|1009141266|ref|XP_015888103.1|3.3e-10192.08PREDICTED: proteasome subunit beta type-2-B [Ziziphus jujuba][more]
gi|823178574|ref|XP_012487182.1|4.4e-10192.50PREDICTED: proteasome subunit beta type-2-A [Gossypium raimondii][more]
gi|728839870|gb|KHG19313.1|1.7e-10091.22Proteasome subunit beta type-2-A -like protein [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0009616 virus induced gene silencing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005839 proteasome core complex
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004175 endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G017640.1CmoCh14G017640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 3..182
score: 4.7
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 5..52
scor
IPR023333Proteasome B-type subunitPROFILEPS51476PROTEASOME_BETA_2coord: 1..182
score: 42
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 1..196
score: 8.3E
NoneNo IPR availablePANTHERPTHR11599:SF6PROTEASOME SUBUNIT BETA TYPE-2coord: 1..196
score: 8.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G017640Cucsa.254450Cucumber (Gy14) v1cgycmoB0700
CmoCh14G017640CmaCh14G017250Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G017640CmaCh17G002230Cucurbita maxima (Rimu)cmacmoB350
CmoCh14G017640CmaCh06G013950Cucurbita maxima (Rimu)cmacmoB797
CmoCh14G017640CmaCh08G011360Cucurbita maxima (Rimu)cmacmoB883
CmoCh14G017640CmaCh00G003600Cucurbita maxima (Rimu)cmacmoB004
CmoCh14G017640Cla007519Watermelon (97103) v1cmowmB239
CmoCh14G017640Cla021609Watermelon (97103) v1cmowmB231
CmoCh14G017640Csa3G146470Cucumber (Chinese Long) v2cmocuB239
CmoCh14G017640MELO3C006517Melon (DHL92) v3.5.1cmomeB230
CmoCh14G017640ClCG05G005040Watermelon (Charleston Gray)cmowcgB219
CmoCh14G017640ClCG06G006350Watermelon (Charleston Gray)cmowcgB221
CmoCh14G017640CSPI03G12960Wild cucumber (PI 183967)cmocpiB243
CmoCh14G017640Lsi05G016200Bottle gourd (USVL1VR-Ls)cmolsiB233
CmoCh14G017640Lsi09G013050Bottle gourd (USVL1VR-Ls)cmolsiB213
CmoCh14G017640Cp4.1LG12g01860Cucurbita pepo (Zucchini)cmocpeB223
CmoCh14G017640Cp4.1LG03g10730Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G017640Cp4.1LG08g04110Cucurbita pepo (Zucchini)cmocpeB254
CmoCh14G017640MELO3C006517.2Melon (DHL92) v3.6.1cmomedB260
CmoCh14G017640CsaV3_3G013100Cucumber (Chinese Long) v3cmocucB0283
CmoCh14G017640Cla97C06G115860Watermelon (97103) v2cmowmbB246
CmoCh14G017640Cla97C05G086170Watermelon (97103) v2cmowmbB243
CmoCh14G017640Bhi01G000569Wax gourdcmowgoB0317
CmoCh14G017640Bhi12G001504Wax gourdcmowgoB0300
CmoCh14G017640CsGy3G013110Cucumber (Gy14) v2cgybcmoB290
CmoCh14G017640Carg06154Silver-seed gourdcarcmoB1284
CmoCh14G017640Carg23507Silver-seed gourdcarcmoB1142
CmoCh14G017640Carg15895Silver-seed gourdcarcmoB0444
CmoCh14G017640Carg10033Silver-seed gourdcarcmoB0319
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh14G017640CmoCh17G002130Cucurbita moschata (Rifu)cmocmoB198
CmoCh14G017640CmoCh06G013990Cucurbita moschata (Rifu)cmocmoB224
CmoCh14G017640CmoCh08G011090Cucurbita moschata (Rifu)cmocmoB233
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G017640Silver-seed gourdcarcmoB0150
CmoCh14G017640Watermelon (97103) v2cmowmbB253
CmoCh14G017640Watermelon (97103) v2cmowmbB263
CmoCh14G017640Wax gourdcmowgoB0333
CmoCh14G017640Cucurbita moschata (Rifu)cmocmoB197
CmoCh14G017640Cucurbita moschata (Rifu)cmocmoB213
CmoCh14G017640Watermelon (Charleston Gray)cmowcgB227
CmoCh14G017640Watermelon (97103) v1cmowmB223
CmoCh14G017640Cucurbita pepo (Zucchini)cmocpeB230
CmoCh14G017640Bottle gourd (USVL1VR-Ls)cmolsiB235