CmoCh14G017270 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTCCCTTGAAAGGCGAAAACTGAAAGGTACGCTCAAAATTTTCTCTATATCCTATTTGAATTTCGACTCTCAATTTTTTGTTGCATTAGTTTAGCTTCTGATTTGTTCCGTGGAACGATTCTTCTCCTATACCGAAACTAGTTTAGGTTGCAGAATTTCTTACATTTGCCATGATTTTGAGTTACAAAATGACGGAAACTGATGGTTCTGATTCTAATTAGGATTGTATTTTTGTTATTTCAAATGAGTAATATGAAATGAATTGGCTACGAGTTTGAATCATGGGTAGAAGAATCGAATTGTTTAGTCTCAGTTCTGTCGCAATGGTAGAAGGTACCGATTTTCCGTAGGATGAGGTTTCTAATTCCAGATTTTGATCATGTTCAGAGTTAATCAATTAGCGTGAATTGATACTCGAAAGTTAATGAATGTTGGCTTCCTCGGCTGTGTTTAGAAGACAACAGTTCTTGATAAGGTCTCTTGGAGGTTTTGGTGATTGTGCCCATCAGAATAGGCGGCAACAGATCAAAGCCATGAGTGGGACTTCTATGGAGGCTGATGCTGAGAACATTCTAAGAGCTATTACACCTAGCCTTGATCCCAAAAGATATAAAGGCCAGGCGGGTAAGGTCTCAAGATACTGTGTAGTGGCTTGTATTTTATGCTTTATCAAGTGTTGTCCATTGAATTAAGGTGTTTCTTAGAAGTTTTCTGATTAACAATCTATATCTGCATATCAGGGAAGATAGCTGTTATTGGTGGATGTCGTGAGTACACAGGTGCTCCCTATTTCGCTGCTATATCAGCATTGAAAATTGTTAGTTCAGACCCCTTTTTCTTGGTGTTCTTGTTAAAGAGTTTTGTTCTTTAATTTCTATATGGATATTTATTTTTTCCTCTTTTTACTTGCAAAGGTGAATGACTACCCATTAGTTTTTCCCTTCAGGGTGCAGATTTATCTCATGTTTTCTGCACTAAAGATGCTGCTCCTGTCATAAAGAGCTATAGTCCAGAGTTAATTGTGCATCCTGTTCTGGAAGAATCATACAGTGTCAGGTGCTTCCGCTTTTTTCTATATTTTGGTCGATGAACCGAAATTTTGATATTTGACTGATGCGTTCTGATGTTTTAGAGATGAGGAAAAGAAGTTCACTGCAGAAAGGGTTCTTGCTGAGGTTGACAAGTGGCTGGAAAGATTCGATTGTCTTGTCATTGGTCCTGGCCTTGGAAGAGACCCGTTTCTTCTGGTGATTATGTTATTGTTTTTTGGCTAACTTACATGGTTCCTTCTTGAACTTTACACTTGATTTCAACTTTGTCCATCGTTGTTTCCAGACTTCTAAACTTTGGCTGACATGTTTGATAAAACGAAACTTTTCTGTAGATTTGACTAGTGGAATATAGAAAACACCTTTTCCTTTTTTCCTTTTTTCCAGACTTTCAACTATGCTTAGTTCTTTTGTCGCATCACGCCTCACTTTAGTAGACACGTGAGTAGCTAGTTTAAAGGTAGCCATTCCTCCCTACTTCTAGTTATTTTACAGTAGTGGAGAGTCTTAACGAAGGACTTAATTAAAATTAATCGAAGGTATGGGGTATGACTGAAATTTCTGAACTGAAGGGATGAATTTGAAATCAAGTGCATGGTTAGGGATAAATGATAGATTTAGTTGCAGTGCATGGTTCGGTTGTATTTTCTTTTCTGAAAAGGACCATGCGGACATGTTCTTTCCCAAAATTGGCATGCATTACTTACGTCTAGATGTATTACAAACTTGCCTACCAGAGTACCTCTGATAATTATACGTAATATTGAGTTTCCCTTGCTTCAAATGCTAAACTTGGGACCTAGAGATTAACTGGTTATGTTATAGGCTAAAAACGTATGTATTAATGCTCATTAGGGCTAGAAAACCCATATGTGCTAATTTGGTGTAAATTCCATAAATGGTTGTATCTTGATACCCCTAAAAAAATTTCATGTGAACCTCCAATCGATTGAAACTCGAAGATAGAAACAAAAAATAGAATAAATTTGTTTTCCTGAGGCTTTTCTTTTTTTTTTTCGTGGTTGCAGTCCATTAAAACCGTCATATGAAGTTAATTCATCCATTCTTTCTTTATCTAGATTGATCTGATATTTTCTGCCAGTCTCTTTAATACCATGAAATTTTCTATTGGTTGAAAACTATTCCAGGAATGTGTCAGTGAAATCATAAAGCATGCAAGGCAGACCAATATACCAATGATCATAGACGGGGTATGAATATAGCAGAGCACATACAATTTGAAAGAAATTACCGTGTTTATACTGTTGTCATGCCTGCCATTTTCAATGGGTCTGTCGGCGGCTGCTTACTGCCGGTTGTGTTTGTTGCTTTATCAGGATGGTCTCTTTCTTATCACGGACAATCTTCACCTTGTAAGCAATTACCCCTTGGCAGTCCTGACACCAAATGTAAATGAATATAAGCGTCTTGTGAAAAATGTACTGCTTGCTGAAGTCGATGAACAAGATGCTCCTAACCAATTGCTGTCTCTTGCCAAAAGGTAAAACCATGATGTTTTTCATTTTAATAGTGTATGGACATGCTTCTCATGTTTTTCTTGCTATCTCTATAGTGAATCTTGTATGGACATGCTACCTTCCACACCCCTGAAATCAGCACATTAG TCCTTCCCTTGAAAGGCGAAAACTGAAAGAGTTAATCAATTAGCGTGAATTGATACTCGAAAGTTAATGAATGTTGGCTTCCTCGGCTGTGTTTAGAAGACAACAGTTCTTGATAAGGTCTCTTGGAGGTTTTGGTGATTGTGCCCATCAGAATAGGCGGCAACAGATCAAAGCCATGAGTGGGACTTCTATGGAGGCTGATGCTGAGAACATTCTAAGAGCTATTACACCTAGCCTTGATCCCAAAAGATATAAAGGCCAGGCGGGGAAGATAGCTGTTATTGGTGGATGTCGTGAGTACACAGGTGCTCCCTATTTCGCTGCTATATCAGCATTGAAAATTGGTGCAGATTTATCTCATGTTTTCTGCACTAAAGATGCTGCTCCTGTCATAAAGAGCTATAGTCCAGAGTTAATTGTGCATCCTGTTCTGGAAGAATCATACAGTGTCAGAGATGAGGAAAAGAAGTTCACTGCAGAAAGGGTTCTTGCTGAGGTTGACAAGTGGCTGGAAAGATTCGATTGTCTTGTCATTGGTCCTGGCCTTGGAAGAGACCCGTTTCTTCTGGAATGTGTCAGTGAAATCATAAAGCATGCAAGGCAGACCAATATACCAATGATCATAGACGGGGATGGTCTCTTTCTTATCACGGACAATCTTCACCTTGTAAGCAATTACCCCTTGGCAGTCCTGACACCAAATGTAAATGAATATAAGCGTCTTGTGAAAAATGTACTGCTTGCTGAAGTCGATGAACAAGATGCTCCTAACCAATTGCTGTCTCTTGCCAAAAGTGAATCTTGTATGGACATGCTACCTTCCACACCCCTGAAATCAGCACATTAG ATGTTGGCTTCCTCGGCTGTGTTTAGAAGACAACAGTTCTTGATAAGGTCTCTTGGAGGTTTTGGTGATTGTGCCCATCAGAATAGGCGGCAACAGATCAAAGCCATGAGTGGGACTTCTATGGAGGCTGATGCTGAGAACATTCTAAGAGCTATTACACCTAGCCTTGATCCCAAAAGATATAAAGGCCAGGCGGGGAAGATAGCTGTTATTGGTGGATGTCGTGAGTACACAGGTGCTCCCTATTTCGCTGCTATATCAGCATTGAAAATTGGTGCAGATTTATCTCATGTTTTCTGCACTAAAGATGCTGCTCCTGTCATAAAGAGCTATAGTCCAGAGTTAATTGTGCATCCTGTTCTGGAAGAATCATACAGTGTCAGAGATGAGGAAAAGAAGTTCACTGCAGAAAGGGTTCTTGCTGAGGTTGACAAGTGGCTGGAAAGATTCGATTGTCTTGTCATTGGTCCTGGCCTTGGAAGAGACCCGTTTCTTCTGGAATGTGTCAGTGAAATCATAAAGCATGCAAGGCAGACCAATATACCAATGATCATAGACGGGGATGGTCTCTTTCTTATCACGGACAATCTTCACCTTGTAAGCAATTACCCCTTGGCAGTCCTGACACCAAATGTAAATGAATATAAGCGTCTTGTGAAAAATGTACTGCTTGCTGAAGTCGATGAACAAGATGCTCCTAACCAATTGCTGTCTCTTGCCAAAAGTGAATCTTGTATGGACATGCTACCTTCCACACCCCTGAAATCAGCACATTAG
BLAST of CmoCh14G017270 vs. Swiss-Prot
Match: NNRD_VITVI (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Vitis vinifera GN=VIT_05s0020g02800 PE=3 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.9e-99 Identity = 185/241 (76.76%), Postives = 210/241 (87.14%), Query Frame = 1
BLAST of CmoCh14G017270 vs. Swiss-Prot
Match: NNRD_ARATH (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Arabidopsis thaliana GN=At5g19150 PE=2 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 2.6e-90 Identity = 173/242 (71.49%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of CmoCh14G017270 vs. Swiss-Prot
Match: NNRD_SORBI (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Sorghum bicolor GN=Sb05g010020 PE=3 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 7.2e-85 Identity = 164/258 (63.57%), Postives = 196/258 (75.97%), Query Frame = 1
BLAST of CmoCh14G017270 vs. Swiss-Prot
Match: NNRD_PHYPA (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_121160 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.2e-66 Identity = 130/205 (63.41%), Postives = 154/205 (75.12%), Query Frame = 1
BLAST of CmoCh14G017270 vs. Swiss-Prot
Match: NNRD_BOVIN (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Bos taurus GN=NAXD PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50 Identity = 108/209 (51.67%), Postives = 143/209 (68.42%), Query Frame = 1
BLAST of CmoCh14G017270 vs. TrEMBL
Match: A0A0A0L7Q1_CUCSA (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Cucumis sativus GN=Csa_3G149940 PE=3 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 5.5e-124 Identity = 226/241 (93.78%), Postives = 234/241 (97.10%), Query Frame = 1
BLAST of CmoCh14G017270 vs. TrEMBL
Match: A0A067G5B4_CITSI (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Citrus sinensis GN=CISIN_1g016016mg PE=3 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102 Identity = 185/244 (75.82%), Postives = 217/244 (88.93%), Query Frame = 1
BLAST of CmoCh14G017270 vs. TrEMBL
Match: A0A067G832_CITSI (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Citrus sinensis GN=CISIN_1g016016mg PE=3 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102 Identity = 185/244 (75.82%), Postives = 217/244 (88.93%), Query Frame = 1
BLAST of CmoCh14G017270 vs. TrEMBL
Match: V4RYX5_9ROSI (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Citrus clementina GN=CICLE_v10005119mg PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.0e-102 Identity = 185/244 (75.82%), Postives = 217/244 (88.93%), Query Frame = 1
BLAST of CmoCh14G017270 vs. TrEMBL
Match: V4S839_9ROSI (ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Citrus clementina GN=CICLE_v10005119mg PE=3 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.0e-102 Identity = 185/244 (75.82%), Postives = 217/244 (88.93%), Query Frame = 1
BLAST of CmoCh14G017270 vs. TAIR10
Match: AT5G19150.1 (AT5G19150.1 pfkB-like carbohydrate kinase family protein) HSP 1 Score: 333.2 bits (853), Expect = 1.4e-91 Identity = 173/242 (71.49%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of CmoCh14G017270 vs. NCBI nr
Match: gi|778678569|ref|XP_011650990.1| (PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Cucumis sativus]) HSP 1 Score: 451.8 bits (1161), Expect = 7.9e-124 Identity = 226/241 (93.78%), Postives = 234/241 (97.10%), Query Frame = 1
BLAST of CmoCh14G017270 vs. NCBI nr
Match: gi|659076495|ref|XP_008438712.1| (PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase [Cucumis melo]) HSP 1 Score: 451.8 bits (1161), Expect = 7.9e-124 Identity = 225/241 (93.36%), Postives = 234/241 (97.10%), Query Frame = 1
BLAST of CmoCh14G017270 vs. NCBI nr
Match: gi|1009141660|ref|XP_015888313.1| (PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X2 [Ziziphus jujuba]) HSP 1 Score: 389.8 bits (1000), Expect = 3.7e-105 Identity = 187/241 (77.59%), Postives = 221/241 (91.70%), Query Frame = 1
BLAST of CmoCh14G017270 vs. NCBI nr
Match: gi|1009141658|ref|XP_015888312.1| (PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 [Ziziphus jujuba]) HSP 1 Score: 389.8 bits (1000), Expect = 3.7e-105 Identity = 187/241 (77.59%), Postives = 221/241 (91.70%), Query Frame = 1
BLAST of CmoCh14G017270 vs. NCBI nr
Match: gi|720000061|ref|XP_010255910.1| (PREDICTED: ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform X1 [Nelumbo nucifera]) HSP 1 Score: 382.9 bits (982), Expect = 4.5e-103 Identity = 185/241 (76.76%), Postives = 215/241 (89.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |