CmoCh14G014950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G014950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ciliary neurotrophic factor
Location	Cmo_Chr14 : 12008131 .. 12009104 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGAATGAGTGACAACAAACCATTCGAAAGCCACCACGTGTCAAAGAGCAATTGGAGGACGTTCCACTAGGAAAACGATACGACTCTGCTGCCGGAGGAAGCGGAGAGGGGAGGGTGGAGAAGCAGAAAATAAAATGGGTAAAGAAAACCAGAGGATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAAGAGAACAACAACAGAACCGCCTCTCACCGGAGCTCCGGCGGCGACGATCTGCAATTCCTCTCCCGATTACTCTCTCAGGTTAGACAGTTCATCAATTCTACTCTCTCTCTCTCTCTCTCTGGTTTCTGGGATTAGATCAGTTTGTTTCAGAAGAACACAGAAACTGACATATATAATAAAACATCTTAATCGGCGTTCTTCACTACCATGAACAGGTGGAATCAACCAGAGAACAGGGGCGGCGCAAGCACTCCCAACAGGATGATAAAATAATTCAGAAAAACGTAACAGAGAAGGAGATAGTGAAAGAGATAAAAGAAGTGCAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCCGCCATGGTTGTCCTCAACGTTGCTTGGCAAGTTTCTGAGGTGTCCTTTATTTTGAAGCTCAGAGATGGGTTGAGTAACCCATTCAAGAACCTGGCTAGAATTCTGAAAAGAAACACAACTTCAGCAATACAACATAAGATTGAAGCTACTGAATTGCCTGCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGACCACAAAATCCAGTAGTAGCATCATCAAGATCCCAAGTTGTTTGTAATTTTTCAGGCATTATAACAATGTCTGTAATTTTTTATCATTCATATTTCAATTTTCATGCTGTAGAAGTTCAAAGTTTCGATTTTTACGACGGGTATAATAGCATATAGTAGTATGAGCAAATCACTTGAATTTGAAGAAAGCA

mRNA sequence

AAGGGAATGAGTGACAACAAACCATTCGAAAGCCACCACGTGTCAAAGAGCAATTGGAGGACGTTCCACTAGGAAAACGATACGACTCTGCTGCCGGAGGAAGCGGAGAGGGGAGGGTGGAGAAGCAGAAAATAAAATGGGTAAAGAAAACCAGAGGATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAAGAGAACAACAACAGAACCGCCTCTCACCGGAGCTCCGGCGGCGACGATCTGCAATTCCTCTCCCGATTACTCTCTCAGGTGGAATCAACCAGAGAACAGGGGCGGCGCAAGCACTCCCAACAGGATGATAAAATAATTCAGAAAAACGTAACAGAGAAGGAGATAGTGAAAGAGATAAAAGAAGTGCAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCCGCCATGGTTGTCCTCAACGTTGCTTGGCAAGTTTCTGAGGTGTCCTTTATTTTGAAGCTCAGAGATGGGTTGAGTAACCCATTCAAGAACCTGGCTAGAATTCTGAAAAGAAACACAACTTCAGCAATACAACATAAGATTGAAGCTACTGAATTGCCTGCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGACCACAAAATCCAGTAGTAGCATCATCAAGATCCCAAGTTGTTTGTAATTTTTCAGGCATTATAACAATGTCTGTAATTTTTTATCATTCATATTTCAATTTTCATGCTGTAGAAGTTCAAAGTTTCGATTTTTACGACGGGTATAATAGCATATAGTAGTATGAGCAAATCACTTGAATTTGAAGAAAGCA

Coding sequence (CDS)

ATGGGTAAAGAAAACCAGAGGATGGCGGAAGCGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATTCGAAGGTTGATGGAAGAGAACAACAACAGAACCGCCTCTCACCGGAGCTCCGGCGGCGACGATCTGCAATTCCTCTCCCGATTACTCTCTCAGGTGGAATCAACCAGAGAACAGGGGCGGCGCAAGCACTCCCAACAGGATGATAAAATAATTCAGAAAAACGTAACAGAGAAGGAGATAGTGAAAGAGATAAAAGAAGTGCAGAGGCAGAATTTCATAACTCACTGCCTTGTTTCCGCCATGGTTGTCCTCAACGTTGCTTGGCAAGTTTCTGAGGTGTCCTTTATTTTGAAGCTCAGAGATGGGTTGAGTAACCCATTCAAGAACCTGGCTAGAATTCTGAAAAGAAACACAACTTCAGCAATACAACATAAGATTGAAGCTACTGAATTGCCTGCCTGCCTTACCTCATGTGAACCTACCAGATTTTCACTTGAATGA

Homology

[Close]

BLAST of CmoCh14G014950 vs. TrEMBL
Match: A0A0A0KTW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012410 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.3e-45
Identity = 114/171 (66.67%), Postives = 132/171 (77.19%), Query Frame = 1


Query: 8   MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGD------DLQFLSRLLSQVESTREQ 67
           MAEAAA EMELISLAIRRLMEEN +RT SHRSS  D      D+Q LSRLLS+VESTR +
Sbjct: 1   MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGE 60

Query: 68  GRRKHSQQDD-KIIQKNVTEK---------------EIVKEIKEVQRQNFITHCLVSAMV 127
            R  HS+Q+D +II+ N+  +               EIVKE+KEV++QNFITHCLVSAM+
Sbjct: 61  QRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSAMI 120

Query: 128 VLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP 156
           +L VAWQ+SEVSFILKLRDG LSNPFK+LA ILKR TTSAIQH+IEATELP
Sbjct: 121 ILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELP 171

[Close]

BLAST of CmoCh14G014950 vs. TrEMBL
Match: B9GML9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13710g PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.9e-18
Identity = 60/140 (42.86%), Postives = 90/140 (64.29%), Query Frame = 1


Query: 10  EAAAEEMELISLAIRRLMEENNNRTASHRSS--GGDDLQFLSRLLSQVESTRE------- 69
           E +A+++ELI  AI++L+ E  N+  S        D  Q LS+LLS++ S  E       
Sbjct: 2   EESAKKLELIDQAIKKLLAEKRNKETSCDDGLLPDDSDQLLSKLLSELSSATEDVNSPAI 61

Query: 70  -QGRRKHSQQDDKI--IQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVS 129
            +   KH ++       ++N   +EIVKE+++V+RQNF+THCL+SAM+VL VAWQVSEVS
Sbjct: 62  GEAVSKHGEEGPAYGGSRENAAAEEIVKELRKVRRQNFVTHCLLSAMIVLTVAWQVSEVS 121

Query: 130 FILKLRDGLSNPFKNLARIL 138
            ILK++DG+ +PFK+   +L
Sbjct: 122 LILKVKDGMRHPFKSFGSML 141

[Close]

BLAST of CmoCh14G014950 vs. TrEMBL
Match: M5XFA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012545mg PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 1


Query: 14  EEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKI 73
           E MELI+ AI+RL+EE+ NR AS  +   DD   LSRLLSQ +  RE G       D   
Sbjct: 6   ENMELINEAIKRLLEESKNRDAS--ADDDDDCLLLSRLLSQPK--RESGGDNADGDDGG- 65

Query: 74  IQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNL 133
             + +  +EI+KE+ +V+RQN ITH L+S M+VL VAWQ SEV+ + K +DGLS+PFK  
Sbjct: 66  -SEEIDREEIIKELNKVKRQNTITHWLLSVMIVLTVAWQASEVTLLWKFKDGLSHPFKYF 125

Query: 134 ARIL--KRNTTSAIQHKIEATELP 156
             +L  K       +HK EA  LP
Sbjct: 126 GDMLTGKGAGNDLEEHKKEAPPLP 143

[Close]

BLAST of CmoCh14G014950 vs. TrEMBL
Match: B9RMD0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079710 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-16
Identity = 55/139 (39.57%), Postives = 89/139 (64.03%), Query Frame = 1


Query: 12  AAEEMELISLAIRRLMEE--NNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQ 71
           ++++++LI  AI++L+ E  N+   + H S   +D   L+RLLS++E  +     + S+ 
Sbjct: 3   SSQKLKLIDEAIKKLLAEKRNSKEVSGHSSQEDNDHHLLNRLLSELEVLKGGSTVEESED 62

Query: 72  --DDKIIQK---------NVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSF 131
             D   ++K          +  +EIVKE+K V+RQN +THCL+SA++V+ VAWQVSEVS 
Sbjct: 63  EADSASVEKPDEEVGSSTEIGAEEIVKELKHVKRQNIVTHCLLSALIVITVAWQVSEVSL 122

Query: 132 ILKLRDGLSNPFKNLARIL 138
           ILKL+DG ++PFK+   +L
Sbjct: 123 ILKLKDGFTHPFKSFGSVL 141

[Close]

BLAST of CmoCh14G014950 vs. TrEMBL
Match: A0A0A0K9P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-16
Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 1


Query: 10  EAAAEEMELISLAIRRLMEENNNRTASHRSSGGD-----DLQFLSRLLSQVESTREQGRR 69
           E   + +ELIS AIRRL+ +N N+ +S RSS  D     +   L  LLSQ+ES +E    
Sbjct: 2   EEEEQRLELISHAIRRLLVDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTES 61

Query: 70  KH-------------SQQDDKIIQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAW 129
           +              S   ++I+    + +++VKE+K+++RQN +THCL+S M+VL V W
Sbjct: 62  EELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTHCLLSVMIVLTVVW 121

Query: 130 QVSEVSFILKLRDGLSNPFKNLARIL 138
           Q+SEVS IL ++D +S+PF++L   +
Sbjct: 122 QLSEVSIILNVKDKISHPFRSLGNFI 147

[Close]

BLAST of CmoCh14G014950 vs. TAIR10
Match: AT1G27300.1 (AT1G27300.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14
Identity = 51/146 (34.93%), Postives = 82/146 (56.16%), Query Frame = 1


Query: 12  AAEEMELISLAIRRLMEENNNRTASHRS--SGGDDLQFLSRLLSQVESTREQGRR----- 71
           ++E++E +S AI +L+ E   R AS  +     DD  FLS L+SQ+ES   +G+      
Sbjct: 3   SSEDVENLSRAIEKLLHEKRKREASGDAFIEDADDQLFLSSLISQLESPNPKGKEDVITG 62

Query: 72  ----KHSQQDDKIIQKNVTE---------KEIVKEIKEVQRQNFITHCLVSAMVVLNVAW 131
               K  +  D    K  +E         +EI K+IK+V++QN ITH L+SA ++L + W
Sbjct: 63  EEEEKEEESADSSPSKGKSEGQRQLEESIEEIAKDIKKVKKQNKITHVLLSATIILTLVW 122

Query: 132 QVSEVSFILKLRDGLSNPFKNLARIL 138
           Q+SE S I  L+D +S+P +++  +L
Sbjct: 123 QLSEYSMIFMLKDRISHPVRSIGGML 148

[Close]

BLAST of CmoCh14G014950 vs. NCBI nr
Match: gi|449468808|ref|XP_004152113.1| (PREDICTED: uncharacterized protein LOC101214522 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 4.8e-45
Identity = 114/171 (66.67%), Postives = 132/171 (77.19%), Query Frame = 1


Query: 8   MAEAAAEEMELISLAIRRLMEENNNRTASHRSSGGD------DLQFLSRLLSQVESTREQ 67
           MAEAAA EMELISLAIRRLMEEN +RT SHRSS  D      D+Q LSRLLS+VESTR +
Sbjct: 1   MAEAAAVEMELISLAIRRLMEENRHRTNSHRSSDADADADADDMQLLSRLLSEVESTRGE 60

Query: 68  GRRKHSQQDD-KIIQKNVTEK---------------EIVKEIKEVQRQNFITHCLVSAMV 127
            R  HS+Q+D +II+ N+  +               EIVKE+KEV++QNFITHCLVSAM+
Sbjct: 61  QRLNHSKQEDGEIIETNLEAERENNVERSEMKLKTEEIVKELKEVKKQNFITHCLVSAMI 120

Query: 128 VLNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP 156
           +L VAWQ+SEVSFILKLRDG LSNPFK+LA ILKR TTSAIQH+IEATELP
Sbjct: 121 ILTVAWQISEVSFILKLRDGLLSNPFKSLATILKRKTTSAIQHQIEATELP 171

[Close]

BLAST of CmoCh14G014950 vs. NCBI nr
Match: gi|659108089|ref|XP_008454012.1| (PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 111/170 (65.29%), Postives = 129/170 (75.88%), Query Frame = 1


Query: 8   MAEAAAEEMELISLAIRRLMEENNNRTASHRSSG----GDDLQFLSRLLSQVESTREQGR 67
           M +AA EEMELISLAIRRLMEEN NRT SHRSS      DD+Q LS+LLS+VESTRE+ R
Sbjct: 1   MEKAAEEEMELISLAIRRLMEENRNRTTSHRSSDTDTDADDMQLLSQLLSEVESTREEQR 60

Query: 68  RKH--SQQDDKIIQKN---------------VTEKEIVKEIKEVQRQNFITHCLVSAMVV 127
             H   Q+D +II+ N               V  +EIVKE+KEV++QNF+THCLVSAM++
Sbjct: 61  LNHYSKQEDGEIIETNLEAEGENNVERSEIKVKTEEIVKELKEVKKQNFVTHCLVSAMII 120

Query: 128 LNVAWQVSEVSFILKLRDG-LSNPFKNLARILKRNTTSAIQHKIEATELP 156
           L VAWQ+SEVSFILKLRDG LSNPFK+L  ILKR TTSAIQH+IEATELP
Sbjct: 121 LTVAWQISEVSFILKLRDGLLSNPFKSLGTILKRKTTSAIQHQIEATELP 170

[Close]

BLAST of CmoCh14G014950 vs. NCBI nr
Match: gi|1009152838|ref|XP_015894313.1| (PREDICTED: uncharacterized protein LOC107428308 [Ziziphus jujuba])

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-18
Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 1


Query: 14  EEMELISLAIRRLMEENNNRTASHRS---SGGDDLQFLSRLLSQVESTREQGRRKHSQQD 73
           + +ELI+ AI++L++E  NR  S  S      DD  FLSRLL Q+ES +  G+ + ++  
Sbjct: 6   QNLELINAAIQKLIQERKNREVSGESFIEEDDDDQLFLSRLLYQLESLKRDGKLEQNESS 65

Query: 74  DKIIQKN-----------------VTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAWQV 133
           +K+ + N                 V   EIVKE+K+V++QN ITH L+SAM+VL + WQ+
Sbjct: 66  NKVGEVNCRVDESKSEKGDGNIEVVDTDEIVKELKKVKKQNSITHWLLSAMIVLTLVWQI 125

Query: 134 SEVSFILKLRDGLSNPFKNLARIL 138
           SEVS ILKL+DG+S+PF++L  +L
Sbjct: 126 SEVSLILKLKDGVSHPFRSLGGML 149

[Close]

BLAST of CmoCh14G014950 vs. NCBI nr
Match: gi|224057762|ref|XP_002299313.1| (hypothetical protein POPTR_0001s13710g [Populus trichocarpa])

HSP 1 Score: 99.0 bits (245), Expect = 8.5e-18
Identity = 60/140 (42.86%), Postives = 90/140 (64.29%), Query Frame = 1


Query: 10  EAAAEEMELISLAIRRLMEENNNRTASHRSS--GGDDLQFLSRLLSQVESTRE------- 69
           E +A+++ELI  AI++L+ E  N+  S        D  Q LS+LLS++ S  E       
Sbjct: 2   EESAKKLELIDQAIKKLLAEKRNKETSCDDGLLPDDSDQLLSKLLSELSSATEDVNSPAI 61

Query: 70  -QGRRKHSQQDDKI--IQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVS 129
            +   KH ++       ++N   +EIVKE+++V+RQNF+THCL+SAM+VL VAWQVSEVS
Sbjct: 62  GEAVSKHGEEGPAYGGSRENAAAEEIVKELRKVRRQNFVTHCLLSAMIVLTVAWQVSEVS 121

Query: 130 FILKLRDGLSNPFKNLARIL 138
            ILK++DG+ +PFK+   +L
Sbjct: 122 LILKVKDGMRHPFKSFGSML 141

[Close]

BLAST of CmoCh14G014950 vs. NCBI nr
Match: gi|596197726|ref|XP_007223608.1| (hypothetical protein PRUPE_ppa012545mg [Prunus persica])

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 1


Query: 14  EEMELISLAIRRLMEENNNRTASHRSSGGDDLQFLSRLLSQVESTREQGRRKHSQQDDKI 73
           E MELI+ AI+RL+EE+ NR AS  +   DD   LSRLLSQ +  RE G       D   
Sbjct: 6   ENMELINEAIKRLLEESKNRDAS--ADDDDDCLLLSRLLSQPK--RESGGDNADGDDGG- 65

Query: 74  IQKNVTEKEIVKEIKEVQRQNFITHCLVSAMVVLNVAWQVSEVSFILKLRDGLSNPFKNL 133
             + +  +EI+KE+ +V+RQN ITH L+S M+VL VAWQ SEV+ + K +DGLS+PFK  
Sbjct: 66  -SEEIDREEIIKELNKVKRQNTITHWLLSVMIVLTVAWQASEVTLLWKFKDGLSHPFKYF 125

Query: 134 ARIL--KRNTTSAIQHKIEATELP 156
             +L  K       +HK EA  LP
Sbjct: 126 GDMLTGKGAGNDLEEHKKEAPPLP 143

The following BLAST results are available for this feature:

BLAST of CmoCh14G014950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh14G014950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTW6_CUCSA	3.3e-45	66.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012410 PE=4 SV=1	[more]
B9GML9_POPTR	5.9e-18	42.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13710g PE=4 SV=1	[more]
M5XFA8_PRUPE	1.3e-17	46.53	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012545mg PE=4 SV=1	[more]
B9RMD0_RICCO	1.9e-16	39.57	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079710 PE=4 SV=1	[more]
A0A0A0K9P4_CUCSA	4.2e-16	38.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G095320 PE=4 SV=1	[more]

BLAST of CmoCh14G014950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27300.1	6.1e-14	34.93	unknown protein	[more]

BLAST of CmoCh14G014950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468808\|ref\|XP_004152113.1\|	4.8e-45	66.67	PREDICTED: uncharacterized protein LOC101214522 [Cucumis sativus]	[more]
gi\|659108089\|ref\|XP_008454012.1\|	1.4e-44	65.29	PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]	[more]
gi\|1009152838\|ref\|XP_015894313.1\|	2.9e-18	42.36	PREDICTED: uncharacterized protein LOC107428308 [Ziziphus jujuba]	[more]
gi\|224057762\|ref\|XP_002299313.1\|	8.5e-18	42.86	hypothetical protein POPTR_0001s13710g [Populus trichocarpa]	[more]
gi\|596197726\|ref\|XP_007223608.1\|	1.9e-17	46.53	hypothetical protein PRUPE_ppa012545mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G014950.1	CmoCh14G014950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 9..29 scor
None	No IPR available	PANTHER	PTHR35280	FAMILY NOT NAMED	coord: 2..138 score: 6.4
None	No IPR available	PANTHER	PTHR35280:SF1	F17L21.9	coord: 2..138 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G014950	Cucsa.095070	Cucumber (Gy14) v1	cgycmoB0186
CmoCh14G014950	CmaCh14G014580	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G014950	Cla010865	Watermelon (97103) v1	cmowmB222
CmoCh14G014950	Csa4G012410	Cucumber (Chinese Long) v2	cmocuB245
CmoCh14G014950	MELO3C017741	Melon (DHL92) v3.5.1	cmomeB232
CmoCh14G014950	ClCG07G015460	Watermelon (Charleston Gray)	cmowcgB226
CmoCh14G014950	CSPI04G03070	Wild cucumber (PI 183967)	cmocpiB250
CmoCh14G014950	Lsi07G000210	Bottle gourd (USVL1VR-Ls)	cmolsiB242
CmoCh14G014950	Cp4.1LG03g12810	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G014950	MELO3C032628.2	Melon (DHL92) v3.6.1	cmomedB264
CmoCh14G014950	CsaV3_4G003050	Cucumber (Chinese Long) v3	cmocucB0291
CmoCh14G014950	Cla97C07G142430	Watermelon (97103) v2	cmowmbB252
CmoCh14G014950	Bhi01G002153	Wax gourd	cmowgoB0311
CmoCh14G014950	CsGy4G002940	Cucumber (Gy14) v2	cgybcmoB455
CmoCh14G014950	Carg06610	Silver-seed gourd	carcmoB0163

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G014950	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh14G014950	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G014950	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G014950	Silver-seed gourd	carcmoB0946