CmoCh14G012970 (gene) Cucurbita moschata (Rifu)

NameCmoCh14G012970
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
LocationCmo_Chr14 : 10846423 .. 10847196 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGACAGAGTCCACCCTAACGCCGCCGCCGCTGCCGCTGCCACCAACGGCGCTCCGGCGGCCAAGACCGCTCCATTTCCAGCCACCAAGTCCCAACTCTACGGCGCTAGCCGCCCTGCTTACCGTCCTCAGCCATACCACCGCCGACGCCGCAGCCGCAGTTGCTGCTGCTCTGTCTGCCTCTGGTTATCCCTAATTCTCATCCTCCTAATCTTCCTCCTCGCCGTTGCCTCCGCCGTCGTTTACCTAATCTACCGCCCTCAGAGGCCGTCCTTCTCCGTCTCCGCCGTGAAACTCTCCCATTTCAACATTACTTCCTCTTCACTCCTCAATTCGAAGTTCGATCTCAACGTCTCCGCCAGAAACCCTAACAAAAAACTCGTGTTTACTTACAATCCGGTCTCGATTTCAATCTTCTCCAACGAAATCGATGTCGGCAACGGAGTAATTCCTGGATTTGTGCACAATACGAAGAACACCACTCTGTTGAAGACCTCGATTATCAGCAACCGCCAACAACTCGATAGCTCGTCGGTGAGCACCTTGAAGAGTAGTATGAAGAGCAAGAAAGGCTTGCCGTTACAAATTCAACTCGATACAAAGGTGAAATTAAAGATGGGAGCACTTAAGAGCCCTAAAATCGGAATCAGAGTTTCTTGCGACGGAATCTCGGTAACCGTTCCCACCGGTAAATCTCCGGCCACCGCCTCAACTTCCGGCGCAAAATGTAAGGTCGATCTTAGAGTGAAGATCTGGAAATGGACCATCTAA

mRNA sequence

ATGACGGACAGAGTCCACCCTAACGCCGCCGCCGCTGCCGCTGCCACCAACGGCGCTCCGGCGGCCAAGACCGCTCCATTTCCAGCCACCAAGTCCCAACTCTACGGCGCTAGCCGCCCTGCTTACCGTCCTCAGCCATACCACCGCCGACGCCGCAGCCGCAGTTGCTGCTGCTCTGTCTGCCTCTGGTTATCCCTAATTCTCATCCTCCTAATCTTCCTCCTCGCCGTTGCCTCCGCCGTCGTTTACCTAATCTACCGCCCTCAGAGGCCGTCCTTCTCCGTCTCCGCCGTGAAACTCTCCCATTTCAACATTACTTCCTCTTCACTCCTCAATTCGAAGTTCGATCTCAACGTCTCCGCCAGAAACCCTAACAAAAAACTCGTGTTTACTTACAATCCGGTCTCGATTTCAATCTTCTCCAACGAAATCGATGTCGGCAACGGAGTAATTCCTGGATTTGTGCACAATACGAAGAACACCACTCTGTTGAAGACCTCGATTATCAGCAACCGCCAACAACTCGATAGCTCGTCGGTGAGCACCTTGAAGAGTAGTATGAAGAGCAAGAAAGGCTTGCCGTTACAAATTCAACTCGATACAAAGGTGAAATTAAAGATGGGAGCACTTAAGAGCCCTAAAATCGGAATCAGAGTTTCTTGCGACGGAATCTCGGTAACCGTTCCCACCGGTAAATCTCCGGCCACCGCCTCAACTTCCGGCGCAAAATGTAAGGTCGATCTTAGAGTGAAGATCTGGAAATGGACCATCTAA

Coding sequence (CDS)

ATGACGGACAGAGTCCACCCTAACGCCGCCGCCGCTGCCGCTGCCACCAACGGCGCTCCGGCGGCCAAGACCGCTCCATTTCCAGCCACCAAGTCCCAACTCTACGGCGCTAGCCGCCCTGCTTACCGTCCTCAGCCATACCACCGCCGACGCCGCAGCCGCAGTTGCTGCTGCTCTGTCTGCCTCTGGTTATCCCTAATTCTCATCCTCCTAATCTTCCTCCTCGCCGTTGCCTCCGCCGTCGTTTACCTAATCTACCGCCCTCAGAGGCCGTCCTTCTCCGTCTCCGCCGTGAAACTCTCCCATTTCAACATTACTTCCTCTTCACTCCTCAATTCGAAGTTCGATCTCAACGTCTCCGCCAGAAACCCTAACAAAAAACTCGTGTTTACTTACAATCCGGTCTCGATTTCAATCTTCTCCAACGAAATCGATGTCGGCAACGGAGTAATTCCTGGATTTGTGCACAATACGAAGAACACCACTCTGTTGAAGACCTCGATTATCAGCAACCGCCAACAACTCGATAGCTCGTCGGTGAGCACCTTGAAGAGTAGTATGAAGAGCAAGAAAGGCTTGCCGTTACAAATTCAACTCGATACAAAGGTGAAATTAAAGATGGGAGCACTTAAGAGCCCTAAAATCGGAATCAGAGTTTCTTGCGACGGAATCTCGGTAACCGTTCCCACCGGTAAATCTCCGGCCACCGCCTCAACTTCCGGCGCAAAATGTAAGGTCGATCTTAGAGTGAAGATCTGGAAATGGACCATCTAA
BLAST of CmoCh14G012970 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.6e-10
Identity = 62/226 (27.43%), Postives = 105/226 (46.46%), Query Frame = 1

Query: 35  YGASRPAYRPQPYHRRRRSRSC--------CCSVCLWLSL--ILILLIFLLAVASAVVYL 94
           YG S P  +   +   RR   C        CC  C+   +  ILI +  LL +A+ +++L
Sbjct: 9   YGPSIPPPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWL 68

Query: 95  IYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEI 154
           I+RP    F V+  KL+ F +  ++ L    DLN + RNPN+++   Y+ + +  +  + 
Sbjct: 69  IFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQ 128

Query: 155 DVG-NGVIPGFVHNTKNTTLLKTSIISNR-QQLDSSSVSTLKSSMKSKKGLPLQIQLDTK 214
             G +  I  F    KNTT++ T ++  +   LD      L   + S+    +  +L  K
Sbjct: 129 RFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI-YRIDAKLRLK 188

Query: 215 VKLKMGALKSPKIGIRVSCDGISVTVP-TGKSPATASTSGAKCKVD 248
           ++ K G +KS +   ++ CD   + VP T  S +       KC VD
Sbjct: 189 IRFKFGLIKSWRFKPKIKCD---LKVPLTSNSTSGFVFQPTKCDVD 230

BLAST of CmoCh14G012970 vs. TrEMBL
Match: A0A0A0LCT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848290 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 7.4e-121
Identity = 235/259 (90.73%), Postives = 246/259 (94.98%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAA--KTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCC 60
           MTDRVHPNAAAAAAA+NGAP A  KTAPFPATKSQLYGASRPAYRPQP+HRRR SRSCCC
Sbjct: 1   MTDRVHPNAAAAAAASNGAPPAPPKTAPFPATKSQLYGASRPAYRPQPHHRRRHSRSCCC 60

Query: 61  SVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLN 120
           SVCLWLSL +ILLIFLLA+ASAVVYLIYRP RPSFSVSAVKLS FNITSSSLLNSKFDLN
Sbjct: 61  SVCLWLSLTIILLIFLLAIASAVVYLIYRPHRPSFSVSAVKLSQFNITSSSLLNSKFDLN 120

Query: 121 VSARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSS 180
           VS RNPNKKLVFTYNPVSISIFSNEID+G+GV+PGFVH TKNTTLLKTS+IS  QQLDSS
Sbjct: 121 VSTRNPNKKLVFTYNPVSISIFSNEIDIGDGVLPGFVHETKNTTLLKTSVISKGQQLDSS 180

Query: 181 SVSTLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATAS 240
           S STLKSSMKSKKGLPLQIQLDTKVKLKMGALK+PKIGIRV+CDGISV VPTGKSPATAS
Sbjct: 181 SESTLKSSMKSKKGLPLQIQLDTKVKLKMGALKTPKIGIRVTCDGISVNVPTGKSPATAS 240

Query: 241 TSGAKCKVDLRVKIWKWTI 258
           TSGAKCKVDLR+KIWKWTI
Sbjct: 241 TSGAKCKVDLRIKIWKWTI 259

BLAST of CmoCh14G012970 vs. TrEMBL
Match: A0A0S3SFT4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G032700 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.5e-84
Identity = 159/257 (61.87%), Postives = 202/257 (78.60%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  AAAA N A       FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAAAAANPA-------FPATKAQLYGATRPTYRPQPHHRRRSKRGCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           C WL L +++L+ L+ +A  V YL+YRP RP+F+V+++KLS+ N+T+SS LNS+FD+ VS
Sbjct: 61  CFWLILTVLVLLLLIGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTASSTLNSRFDVTVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           A NPNKK++F Y+P SISI S ++DVG+G++P F+H  KNTTL+KTSI+S    L S   
Sbjct: 121 ATNPNKKILFAYDPTSISILSGDVDVGDGIVPAFLHGKKNTTLIKTSIVSTGSALQSDDA 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           S LKSSMK+K GLPL++ L+TKVK KMG LK+PK+GIRVSCDGI V +P+GK PATASTS
Sbjct: 181 SRLKSSMKNKNGLPLEVNLETKVKAKMGKLKTPKVGIRVSCDGIRVNLPSGKKPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
            AKC VD+R KIWKWTI
Sbjct: 241 NAKCNVDVRFKIWKWTI 250

BLAST of CmoCh14G012970 vs. TrEMBL
Match: A0A0L9UP75_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g199700 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.5e-84
Identity = 159/257 (61.87%), Postives = 202/257 (78.60%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  AAAA N A       FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAAAAANPA-------FPATKAQLYGATRPTYRPQPHHRRRSKRGCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           C WL L +++L+ L+ +A  V YL+YRP RP+F+V+++KLS+ N+T+SS LNS+FD+ VS
Sbjct: 61  CFWLILTVLVLLLLIGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTASSTLNSRFDVTVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           A NPNKK++F Y+P SISI S ++DVG+G++P F+H  KNTTL+KTSI+S    L S   
Sbjct: 121 ATNPNKKILFAYDPTSISILSGDVDVGDGIVPAFLHGKKNTTLIKTSIVSTGSALQSDDA 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           S LKSSMK+K GLPL++ L+TKVK KMG LK+PK+GIRVSCDGI V +P+GK PATASTS
Sbjct: 181 SRLKSSMKNKNGLPLEVNLETKVKAKMGKLKTPKVGIRVSCDGIRVNLPSGKKPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
            AKC VD+R KIWKWTI
Sbjct: 241 NAKCNVDVRFKIWKWTI 250

BLAST of CmoCh14G012970 vs. TrEMBL
Match: V7BWX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G159100g PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.6e-83
Identity = 159/257 (61.87%), Postives = 201/257 (78.21%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  AAAA      A    FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAAAA------AANPAFPATKAQLYGATRPTYRPQPHHRRRSKRRCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           C WL L +++L+ LL +A  V YL+YRP RP+F+V+++KLS+ N+TSSS LNS+FD+ VS
Sbjct: 61  CFWLILTVLVLLLLLGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTSSSALNSRFDVTVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           A NPNKK++F Y+P SISI S  +DVG+G +P F+H  KNTTL++TSI++ R  L S   
Sbjct: 121 ATNPNKKILFAYDPTSISILSGSVDVGDGTVPAFLHGKKNTTLIRTSIVTTRHPLQSEDA 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           S LKSSMKSK GLPL++ L+TKVK KMG L++PK+GIRVSCDGI VT+P+GK PATASTS
Sbjct: 181 SQLKSSMKSKNGLPLKVNLETKVKAKMGNLQTPKVGIRVSCDGIRVTLPSGKKPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
            AKC VD+R KIWKWT+
Sbjct: 241 NAKCNVDVRFKIWKWTV 251

BLAST of CmoCh14G012970 vs. TrEMBL
Match: I1MCZ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G024400 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 9.2e-79
Identity = 159/258 (61.63%), Postives = 199/258 (77.13%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  A    NG  A  +  FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAVV--NGGAANPS--FPATKAQLYGATRPTYRPQPHHRRRSRRRCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSS-LLNSKFDLNV 120
             WL L +++L+ L+ VA  V YL+YRP  P+F+V+++KLS+ N+TSSS  LNS+FD+ V
Sbjct: 61  FFWLILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSNTLNSRFDITV 120

Query: 121 SARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSS 180
           SA NPNKK++F Y+P SI+I S +IDVG+G +PGF H  KNTTL+K SI+S+   L S  
Sbjct: 121 SATNPNKKILFAYDPTSITILSGDIDVGDGTVPGFQHPKKNTTLIKASILSSGHALQSDE 180

Query: 181 VSTLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATAST 240
            S LKSSMKSK GLPL++ L+TKVK KMG LK+PK+GIRVSCDGI VT+P+GK PATAST
Sbjct: 181 ASRLKSSMKSKNGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVTLPSGKKPATAST 240

Query: 241 SGAKCKVDLRVKIWKWTI 258
           S AKC VD+R KIWKWTI
Sbjct: 241 SNAKCDVDVRFKIWKWTI 254

BLAST of CmoCh14G012970 vs. TAIR10
Match: AT1G17620.1 (AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-59
Identity = 133/262 (50.76%), Postives = 173/262 (66.03%), Query Frame = 1

Query: 3   DRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRS--RSCCCSV 62
           DRV+P +   A    GAP      FPA K+QLY A+RPAYRP P  RRR S  R CCC  
Sbjct: 4   DRVYPASKPPAIVGGGAPTTNPT-FPANKAQLYNANRPAYRP-PAGRRRTSHTRGCCCRC 63

Query: 63  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 122
           C W   ++ILL+ ++A ASAVVYLIYRPQRPSF+VS +K+S  N TS+  L +   L+V 
Sbjct: 64  CCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKISTLNFTSAVRLTTAISLSVI 123

Query: 123 ARNPNKKLVFTYNPVSISIFS------NEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQ 182
           ARNPNK + F Y+   I+++       +++ +G G I  F H  KNTT L+++I S   +
Sbjct: 124 ARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTLRSTIGSPPDE 183

Query: 183 LDSSSVSTLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSP 242
           LD  S   LK  +K+KK + ++I L++KVK+KMGALK+PK GIRV+C+GI V  PTGK  
Sbjct: 184 LDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCEGIKVVAPTGKKA 243

Query: 243 ATASTSGAKCKVDLRVKIWKWT 257
            TA+TS AKCKVD R KIWK T
Sbjct: 244 TTATTSAAKCKVDPRFKIWKIT 263

BLAST of CmoCh14G012970 vs. TAIR10
Match: AT5G11890.1 (AT5G11890.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-39
Identity = 108/288 (37.50%), Postives = 166/288 (57.64%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAP---FPAT-------------KSQLY-GASRPAYR 60
           MTDRV P A+    ATNGAP   + P    PAT             K Q+Y  A+RP YR
Sbjct: 1   MTDRVFP-ASKPPTATNGAPPVGSIPPPPAPATVTSNGTTNGMANQKPQVYIPANRPVYR 60

Query: 61  PQPYHRRRRSRS------CCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSA 120
           PQPY RR   +S       CC  C W  LI+++L  + A+A+  +Y+IY P+ PSFSV +
Sbjct: 61  PQPYSRRHHHQSRPSCRRICCCCCFWSILIILILALMTAIAATAMYVIYHPRPPSFSVPS 120

Query: 121 VKLSHFNITSSS-----LLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEID--VGNGV 180
           +++S  N+T+SS      L+S F+  + + NPN+ L F+Y+P ++++ S +    +GNG 
Sbjct: 121 IRISRVNLTTSSDSSVSHLSSFFNFTLISENPNQHLSFSYDPFTVTVNSAKSGTMLGNGT 180

Query: 181 IPGFVHNTKNTTLLKTSIISNR--QQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVKLKMG 240
           +P F  +  N T     I ++   ++LD      L+S + ++  +  +I++ TKVK+ MG
Sbjct: 181 VPAFFSDNGNKTSFHGVIATSTAARELDPDEAKHLRSDL-TRARVGYEIEMRTKVKMIMG 240

Query: 241 ALKSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDLRVKIWKWT 257
            LKS  + I+V+C+G   T+P GK+P  A++   KCK DL VK+WKW+
Sbjct: 241 KLKSEGVEIKVTCEGFEGTIPKGKTPIVATSKKTKCKSDLSVKVWKWS 286

BLAST of CmoCh14G012970 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 82/269 (30.48%), Postives = 145/269 (53.90%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAA------TNGAPAAKTAPFPAT------KSQLYGASRP--AYRPQP 60
           M +RV+P  +   +       ++G    K AP P+T      K Q+Y    P  A+R + 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YHRRRRSRSCC-CSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNI 120
             R++ +RS C C  C +L+ + IL++ L  ++ AV+YLIYRP+ P +S+    +S  N+
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFILIV-LAGISFAVLYLIYRPEAPKYSIEGFSVSGINL 120

Query: 121 TSSSLLNSKFDLNVSARNPNKKL-VFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLL 180
            S+S ++  F++ V +RN N K+ V+     S+ ++ N++D+ NGV+P F    KN T++
Sbjct: 121 NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVV 180

Query: 181 KTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGI 240
           K  +  ++ QL S     +++ + SKK +P ++++   VK+K G++K+  + + V CD  
Sbjct: 181 KLVLSGSKIQLTSGMRKEMRNEV-SKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCD-- 240

Query: 241 SVTVPTGKSPATASTSGAKCKVDLRVKIW 254
              V   K  A +     KC  D  V +W
Sbjct: 241 ---VTVDKLTAPSRIVSRKCSHD--VDLW 260

BLAST of CmoCh14G012970 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 66/236 (27.97%), Postives = 117/236 (49.58%), Query Frame = 1

Query: 19  APAAKTAPFPATKSQLYGASRPAYRPQ-----PYHRRRRSRSCCCSVCLWLSLILILLIF 78
           AP   TAP     S       P    Q     P   ++ SRSC C    +  L+L LLI 
Sbjct: 15  APPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPREKKGSRSCWCRCVCYTLLVLFLLIV 74

Query: 79  LLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVSARNPNKKLVFTYN 138
           ++     ++YL++RP+ P +++  ++L+ F +     L++ F++ ++A+NPN+K+   Y 
Sbjct: 75  IVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTITAKNPNEKIGIYYE 134

Query: 139 PVS-ISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSVSTLKSSMKSKKG 198
             S IS+   +  + NG +P F    +NTT++   +    Q   +S ++TL+   +    
Sbjct: 135 DGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNA-TSLMTTLQEQQRLTGS 194

Query: 199 LPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDL 249
           +PL+I++   V++K+G LK  K+   V C G+SV      S     +S  K +  L
Sbjct: 195 IPLRIRVTQPVRIKLGKLKLMKVRFLVRC-GVSVDSLAANSVIRVRSSNCKYRFRL 248

BLAST of CmoCh14G012970 vs. TAIR10
Match: AT4G01110.1 (AT4G01110.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 4.4e-16
Identity = 66/225 (29.33%), Postives = 115/225 (51.11%), Query Frame = 1

Query: 41  AYRPQPYHRRRRSRSCCCSVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKL 100
           A+ P    +  R R  CC VC+ ++++++LLI  ++V     +L Y P+ P   +S+ ++
Sbjct: 49  AFYPTKKRQWSRCRVFCCCVCITVAIVILLLILTVSV----FFLYYSPRLPVVRLSSFRV 108

Query: 101 SHFNITSS------SLLNSKFDLNVSARNPNKKLVFTYNPVSISIFSNEID----VGNGV 160
           S+FN +        S L ++    +  RNPN KL + Y  V +++   E D    +G+  
Sbjct: 109 SNFNFSGGKAGDGLSQLTAEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTK 168

Query: 161 IPGFVHNTKNTTLLKTSIISNRQQLDSSSVSTLKSSMKSKKGLPLQIQLDTKVKLKMGAL 220
           + GFV    N T++   I   +QQ+D  +V  L++ MKSKK L +++   TKV L +G  
Sbjct: 169 VKGFVEKPGNRTVVIVPIKVKKQQVDDPTVKRLRADMKSKK-LVVKVMAKTKVGLGVGRR 228

Query: 221 KSPKIGIRVSCDGISVTVPTGKSPATASTSGAKCKVDLRVKIWKW 256
           K   +G+ +SC G+ +         T  +  +KC     +K+ KW
Sbjct: 229 KIVTVGVTISCGGVRL--------QTLDSKMSKC----TIKMLKW 256

BLAST of CmoCh14G012970 vs. NCBI nr
Match: gi|449458171|ref|XP_004146821.1| (PREDICTED: protein YLS9 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 1.1e-120
Identity = 235/259 (90.73%), Postives = 246/259 (94.98%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAA--KTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCC 60
           MTDRVHPNAAAAAAA+NGAP A  KTAPFPATKSQLYGASRPAYRPQP+HRRR SRSCCC
Sbjct: 1   MTDRVHPNAAAAAAASNGAPPAPPKTAPFPATKSQLYGASRPAYRPQPHHRRRHSRSCCC 60

Query: 61  SVCLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLN 120
           SVCLWLSL +ILLIFLLA+ASAVVYLIYRP RPSFSVSAVKLS FNITSSSLLNSKFDLN
Sbjct: 61  SVCLWLSLTIILLIFLLAIASAVVYLIYRPHRPSFSVSAVKLSQFNITSSSLLNSKFDLN 120

Query: 121 VSARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSS 180
           VS RNPNKKLVFTYNPVSISIFSNEID+G+GV+PGFVH TKNTTLLKTS+IS  QQLDSS
Sbjct: 121 VSTRNPNKKLVFTYNPVSISIFSNEIDIGDGVLPGFVHETKNTTLLKTSVISKGQQLDSS 180

Query: 181 SVSTLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATAS 240
           S STLKSSMKSKKGLPLQIQLDTKVKLKMGALK+PKIGIRV+CDGISV VPTGKSPATAS
Sbjct: 181 SESTLKSSMKSKKGLPLQIQLDTKVKLKMGALKTPKIGIRVTCDGISVNVPTGKSPATAS 240

Query: 241 TSGAKCKVDLRVKIWKWTI 258
           TSGAKCKVDLR+KIWKWTI
Sbjct: 241 TSGAKCKVDLRIKIWKWTI 259

BLAST of CmoCh14G012970 vs. NCBI nr
Match: gi|659093589|ref|XP_008447609.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 1.8e-115
Identity = 229/257 (89.11%), Postives = 239/257 (93.00%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRVHPNAAAAAA    AP  K APFP TKSQLYGA+RPAYRPQP+HRRR SRSCCCS 
Sbjct: 1   MTDRVHPNAAAAAAP---APP-KAAPFPPTKSQLYGATRPAYRPQPHHRRRHSRSCCCSA 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           CLWLSL +ILLIFLLA+ASAVVYLIYRP RPSFSVSAVKLS FNITSSSLLNSKFDLNVS
Sbjct: 61  CLWLSLTIILLIFLLAIASAVVYLIYRPHRPSFSVSAVKLSQFNITSSSLLNSKFDLNVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           ARNPNKKLVFTYNPVSISIFSNEID+G+GV+PGFVH TKNTTLLKTSIIS  QQLDSSS 
Sbjct: 121 ARNPNKKLVFTYNPVSISIFSNEIDIGHGVLPGFVHETKNTTLLKTSIISKGQQLDSSSE 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           STLKSSMKSKKGLPLQIQLDTKVKLKMGALK+PKIGIRV+CDGISV VPTGKSPATASTS
Sbjct: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKTPKIGIRVTCDGISVNVPTGKSPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
           GAKCKVDLR+KIWKWTI
Sbjct: 241 GAKCKVDLRIKIWKWTI 253

BLAST of CmoCh14G012970 vs. NCBI nr
Match: gi|920701167|gb|KOM44392.1| (hypothetical protein LR48_Vigan05g199700 [Vigna angularis])

HSP 1 Score: 318.9 bits (816), Expect = 7.9e-84
Identity = 159/257 (61.87%), Postives = 202/257 (78.60%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  AAAA N A       FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAAAAANPA-------FPATKAQLYGATRPTYRPQPHHRRRSKRGCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           C WL L +++L+ L+ +A  V YL+YRP RP+F+V+++KLS+ N+T+SS LNS+FD+ VS
Sbjct: 61  CFWLILTVLVLLLLIGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTASSTLNSRFDVTVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           A NPNKK++F Y+P SISI S ++DVG+G++P F+H  KNTTL+KTSI+S    L S   
Sbjct: 121 ATNPNKKILFAYDPTSISILSGDVDVGDGIVPAFLHGKKNTTLIKTSIVSTGSALQSDDA 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           S LKSSMK+K GLPL++ L+TKVK KMG LK+PK+GIRVSCDGI V +P+GK PATASTS
Sbjct: 181 SRLKSSMKNKNGLPLEVNLETKVKAKMGKLKTPKVGIRVSCDGIRVNLPSGKKPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
            AKC VD+R KIWKWTI
Sbjct: 241 NAKCNVDVRFKIWKWTI 250

BLAST of CmoCh14G012970 vs. NCBI nr
Match: gi|593700159|ref|XP_007150518.1| (hypothetical protein PHAVU_005G159100g [Phaseolus vulgaris])

HSP 1 Score: 316.2 bits (809), Expect = 5.2e-83
Identity = 159/257 (61.87%), Postives = 201/257 (78.21%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  AAAA      A    FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAAAA------AANPAFPATKAQLYGATRPTYRPQPHHRRRSKRRCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           C WL L +++L+ LL +A  V YL+YRP RP+F+V+++KLS+ N+TSSS LNS+FD+ VS
Sbjct: 61  CFWLILTVLVLLLLLGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTSSSALNSRFDVTVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           A NPNKK++F Y+P SISI S  +DVG+G +P F+H  KNTTL++TSI++ R  L S   
Sbjct: 121 ATNPNKKILFAYDPTSISILSGSVDVGDGTVPAFLHGKKNTTLIRTSIVTTRHPLQSEDA 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           S LKSSMKSK GLPL++ L+TKVK KMG L++PK+GIRVSCDGI VT+P+GK PATASTS
Sbjct: 181 SQLKSSMKSKNGLPLKVNLETKVKAKMGNLQTPKVGIRVSCDGIRVTLPSGKKPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
            AKC VD+R KIWKWT+
Sbjct: 241 NAKCNVDVRFKIWKWTV 251

BLAST of CmoCh14G012970 vs. NCBI nr
Match: gi|950970487|ref|XP_014500081.1| (PREDICTED: uncharacterized protein LOC106761089 [Vigna radiata var. radiata])

HSP 1 Score: 313.9 bits (803), Expect = 2.6e-82
Identity = 157/257 (61.09%), Postives = 200/257 (77.82%), Query Frame = 1

Query: 1   MTDRVHPNAAAAAAATNGAPAAKTAPFPATKSQLYGASRPAYRPQPYHRRRRSRSCCCSV 60
           MTDRV+P+A  AAAA N A       FPATK+QLYGA+RP YRPQP+HRRR  R CCC+ 
Sbjct: 1   MTDRVYPSAKPAAAAANPA-------FPATKAQLYGATRPTYRPQPHHRRRSKRGCCCTF 60

Query: 61  CLWLSLILILLIFLLAVASAVVYLIYRPQRPSFSVSAVKLSHFNITSSSLLNSKFDLNVS 120
           C WL L +++L+ L+ +A  V YL+YRP RP+F+V+++KLS+ N+T+SS LNS+FD+ VS
Sbjct: 61  CFWLILTVLVLLLLIGIAGTVFYLLYRPHRPTFTVTSLKLSYLNLTASSTLNSRFDVTVS 120

Query: 121 ARNPNKKLVFTYNPVSISIFSNEIDVGNGVIPGFVHNTKNTTLLKTSIISNRQQLDSSSV 180
           A NPNKK++F Y+P SISI S ++DVG+G +P F+H  KNTTL+KTSI+S    L S   
Sbjct: 121 ATNPNKKILFAYDPTSISILSGDVDVGDGTVPAFLHGKKNTTLIKTSIVSTGSALQSDDA 180

Query: 181 STLKSSMKSKKGLPLQIQLDTKVKLKMGALKSPKIGIRVSCDGISVTVPTGKSPATASTS 240
           S LKSSMK+K GLPL++ L+TKVK KMG LK+PK+ IRVSCDGI V +P+GK PATASTS
Sbjct: 181 SRLKSSMKNKNGLPLKVNLETKVKAKMGKLKTPKVRIRVSCDGIRVNLPSGKKPATASTS 240

Query: 241 GAKCKVDLRVKIWKWTI 258
            AKC VD+R KIWKWT+
Sbjct: 241 NAKCNVDVRFKIWKWTV 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
NHL3_ARATH7.6e-1027.43NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LCT1_CUCSA7.4e-12190.73Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848290 PE=4 SV=1[more]
A0A0S3SFT4_PHAAN5.5e-8461.87Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G032700 PE=... [more]
A0A0L9UP75_PHAAN5.5e-8461.87Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g199700 PE=4 SV=1[more]
V7BWX2_PHAVU3.6e-8361.87Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G159100g PE=4 SV=1[more]
I1MCZ5_SOYBN9.2e-7961.63Uncharacterized protein OS=Glycine max GN=GLYMA_15G024400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G17620.11.4e-5950.76 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G11890.13.7e-3937.50 FUNCTIONS IN: molecular_function unknown[more]
AT2G27080.11.2e-2130.48 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G36970.11.2e-1627.97 NDR1/HIN1-like 25[more]
AT4G01110.14.4e-1629.33 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449458171|ref|XP_004146821.1|1.1e-12090.73PREDICTED: protein YLS9 [Cucumis sativus][more]
gi|659093589|ref|XP_008447609.1|1.8e-11589.11PREDICTED: protein YLS9-like [Cucumis melo][more]
gi|920701167|gb|KOM44392.1|7.9e-8461.87hypothetical protein LR48_Vigan05g199700 [Vigna angularis][more]
gi|593700159|ref|XP_007150518.1|5.2e-8361.87hypothetical protein PHAVU_005G159100g [Phaseolus vulgaris][more]
gi|950970487|ref|XP_014500081.1|2.6e-8261.09PREDICTED: uncharacterized protein LOC106761089 [Vigna radiata var. radiata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042026 protein refolding
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G012970.1CmoCh14G012970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 119..221
score: 2.
NoneNo IPR availablePANTHERPTHR31234FAMILY NOT NAMEDcoord: 2..257
score: 3.9E
NoneNo IPR availablePANTHERPTHR31234:SF2LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY MEMBERcoord: 2..257
score: 3.9E
NoneNo IPR availableunknownSSF117070LEA14-likecoord: 71..206
score: 1.4

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G012970Cucsa.341180Cucumber (Gy14) v1cgycmoB0927
CmoCh14G012970Cucsa.360550Cucumber (Gy14) v1cgycmoB0983
CmoCh14G012970CmaCh14G012620Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G012970CmaCh01G000630Cucurbita maxima (Rimu)cmacmoB461
CmoCh14G012970Cla012611Watermelon (97103) v1cmowmB218
CmoCh14G012970Cla015580Watermelon (97103) v1cmowmB211
CmoCh14G012970Csa3G848290Cucumber (Chinese Long) v2cmocuB231
CmoCh14G012970Csa7G451320Cucumber (Chinese Long) v2cmocuB261
CmoCh14G012970MELO3C024389Melon (DHL92) v3.5.1cmomeB203
CmoCh14G012970MELO3C013058Melon (DHL92) v3.5.1cmomeB216
CmoCh14G012970ClCG09G000700Watermelon (Charleston Gray)cmowcgB203
CmoCh14G012970ClCG07G013740Watermelon (Charleston Gray)cmowcgB230
CmoCh14G012970CSPI07G22850Wild cucumber (PI 183967)cmocpiB267
CmoCh14G012970CSPI03G41430Wild cucumber (PI 183967)cmocpiB233
CmoCh14G012970Lsi07G005700Bottle gourd (USVL1VR-Ls)cmolsiB244
CmoCh14G012970Lsi02G029350Bottle gourd (USVL1VR-Ls)cmolsiB221
CmoCh14G012970Cp4.1LG12g08710Cucurbita pepo (Zucchini)cmocpeB221
CmoCh14G012970Cp4.1LG02g14210Cucurbita pepo (Zucchini)cmocpeB244
CmoCh14G012970Cp4.1LG03g14360Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G012970MELO3C024389.2Melon (DHL92) v3.6.1cmomedB229
CmoCh14G012970MELO3C013058.2Melon (DHL92) v3.6.1cmomedB245
CmoCh14G012970CsaV3_7G034780Cucumber (Chinese Long) v3cmocucB0313
CmoCh14G012970CsaV3_3G043870Cucumber (Chinese Long) v3cmocucB0274
CmoCh14G012970Cla97C09G162640Watermelon (97103) v2cmowmbB264
CmoCh14G012970Cla97C07G140560Watermelon (97103) v2cmowmbB255
CmoCh14G012970Bhi09G000305Wax gourdcmowgoB0350
CmoCh14G012970Bhi01G002120Wax gourdcmowgoB0324
CmoCh14G012970CsGy7G021110Cucumber (Gy14) v2cgybcmoB894
CmoCh14G012970CsGy3G038870Cucumber (Gy14) v2cgybcmoB282
CmoCh14G012970Carg09459Silver-seed gourdcarcmoB1375
CmoCh14G012970Carg04308Silver-seed gourdcarcmoB0283
CmoCh14G012970Carg06434Silver-seed gourdcarcmoB0163
The following gene(s) are paralogous to this gene:

None