CmoCh14G012350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G012350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	17.5 kDa class II heat shock protein
Location	Cmo_Chr14 : 10468467 .. 10468943 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGGGCCGCCGATTCGAACTCATCCAACGGACATTTGGTGCAGGCTATAAGCACCCTCTTCCCTTCCCCTGAAGCCCTCGAGAAATTAGCCTTCATTTCCAACGATGCTCGGGAGCCTAAGGGCATGTCCAGCATCCCGACTGACATCCTTGACGCTCCGAAGGAATACGTGTTCTATATGGACCTGCCGGGGCTGTCGAAATCCGACATTCAGGTGACGGTGGAGGAGGAGAACACGCTGGTGATTCGGAGTGGAGGGAAGAGGAAGAGGGAGGATGGGGAGGAGGAAGGGTGCAAGTATTTGAGGCTTGAGCGGAAGGCGCCGCAGAAGATGGTGAGGAAGTTCAGGCTGCCGGAGAATGCCGATACTTCTGCCGTTTCTGCTAAGTGCGAGAGTGGGGTGCTGGTGGTGGTTGTGGGGAAGCTGCCTCCGCCTCCCAAGCCCAAAACGGTGCAGGTCGCCGTCGCCTGA

mRNA sequence

ATGAGCAGGGCCGCCGATTCGAACTCATCCAACGGACATTTGGTGCAGGCTATAAGCACCCTCTTCCCTTCCCCTGAAGCCCTCGAGAAATTAGCCTTCATTTCCAACGATGCTCGGGAGCCTAAGGGCATGTCCAGCATCCCGACTGACATCCTTGACGCTCCGAAGGAATACGTGTTCTATATGGACCTGCCGGGGCTGTCGAAATCCGACATTCAGGTGACGGTGGAGGAGGAGAACACGCTGGTGATTCGGAGTGGAGGGAAGAGGAAGAGGGAGGATGGGGAGGAGGAAGGGTGCAAGTATTTGAGGCTTGAGCGGAAGGCGCCGCAGAAGATGGTGAGGAAGTTCAGGCTGCCGGAGAATGCCGATACTTCTGCCGTTTCTGCTAAGTGCGAGAGTGGGGTGCTGGTGGTGGTTGTGGGGAAGCTGCCTCCGCCTCCCAAGCCCAAAACGGTGCAGGTCGCCGTCGCCTGA

Coding sequence (CDS)

ATGAGCAGGGCCGCCGATTCGAACTCATCCAACGGACATTTGGTGCAGGCTATAAGCACCCTCTTCCCTTCCCCTGAAGCCCTCGAGAAATTAGCCTTCATTTCCAACGATGCTCGGGAGCCTAAGGGCATGTCCAGCATCCCGACTGACATCCTTGACGCTCCGAAGGAATACGTGTTCTATATGGACCTGCCGGGGCTGTCGAAATCCGACATTCAGGTGACGGTGGAGGAGGAGAACACGCTGGTGATTCGGAGTGGAGGGAAGAGGAAGAGGGAGGATGGGGAGGAGGAAGGGTGCAAGTATTTGAGGCTTGAGCGGAAGGCGCCGCAGAAGATGGTGAGGAAGTTCAGGCTGCCGGAGAATGCCGATACTTCTGCCGTTTCTGCTAAGTGCGAGAGTGGGGTGCTGGTGGTGGTTGTGGGGAAGCTGCCTCCGCCTCCCAAGCCCAAAACGGTGCAGGTCGCCGTCGCCTGA

Homology

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BLAST of CmoCh14G012350 vs. Swiss-Prot
Match: HS174_ARATH (17.4 kDa class III heat shock protein OS=Arabidopsis thaliana GN=HSP17.4B PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-40
Identity = 90/151 (59.60%), Postives = 117/151 (77.48%), Query Frame = 1


Query: 17  AISTLFPSPEALEKLAF-------ISNDAREPKGMSSIPTDILDAPKEYVFYMDLPGLSK 76
           AI+  F  PEA+EKL          +N++R     ++IP DIL++PKEY+FY+D+PG+SK
Sbjct: 5   AINHFFGLPEAIEKLILPISRSGESNNESRGRGSSNNIPIDILESPKEYIFYLDIPGISK 64

Query: 77  SDIQVTVEEENTLVIRSGGKRKREDGE-EEGCKYLRLERKAPQKMVRKFRLPENADTSAV 136
           SDIQVTVEEE TLVI+S GKRKR+D E EEG KY+RLER+  Q +V+KFRLPE+AD ++V
Sbjct: 65  SDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDADMASV 124

Query: 137 SAKCESGVLVVVVGKLPP-PPKPKTVQVAVA 159
           +AK + GVL VV+ KLPP PPKPKTVQ+AV+
Sbjct: 125 TAKYQEGVLTVVIKKLPPQPPKPKTVQIAVS 155

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BLAST of CmoCh14G012350 vs. Swiss-Prot
Match: HS186_ORYSJ (18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.6 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.4e-29
Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 1


Query: 17  AISTLFPSPEALEKLAFISNDAREP----------KGMSSI-------PTDILDAPKEYV 76
           A+++L   PE L++L   + D R             G   I       P DI++ P EY 
Sbjct: 8   AVTSLLHLPEVLDRLGAAAGDRRSAGDHAHHAAHGHGQHRISGIGGGAPVDIMETPGEYA 67

Query: 77  FYMDLPGLSKSDIQVTVEEENTLVIRSG-----GKRKREDGEEEGCKYLRLERKA-PQKM 136
           F +D+PGLSKSDIQVT+EE+  LV++S      GKRKRE+ E E CKY+RLER+A P+  
Sbjct: 68  FVLDVPGLSKSDIQVTLEEDRVLVMKSSNGAGNGKRKREEEEGE-CKYIRLERRASPRAF 127

Query: 137 VRKFRLPENADTSAVSAKCESGVLVVVVGKLPPP-PKPKTVQVAVA 159
            RKFRLPE+ADT  +SA+CE+GVL V V K PPP  K K+VQV +A
Sbjct: 128 ARKFRLPEDADTGGISARCENGVLTVTVKKRPPPEKKTKSVQVTIA 172

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BLAST of CmoCh14G012350 vs. Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-26
Identity = 65/122 (53.28%), Postives = 88/122 (72.13%), Query Frame = 1


Query: 39  REPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 98
           R+ K M++ P D+ + P  YVF +D+PGL   DI+V VEE+N L+I   G+RKRE+ E+E
Sbjct: 38  RDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLI--SGERKREE-EKE 97

Query: 99  GCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLPP--PPKPKTVQVA 158
           G K++R+ER+   K +RKF LPENA+T A+SA C+ GVL V V KLPP  P KPKT++V 
Sbjct: 98  GAKFIRMERRV-GKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVK 155

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BLAST of CmoCh14G012350 vs. Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 1


Query: 39  REPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 98
           R+ K M++ P D+ + P  YVF +D+PGL   DI+V VE++N L+I   G+RKR D E+E
Sbjct: 42  RDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLI--CGERKR-DEEKE 101

Query: 99  GCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLPP--PPKPKTVQVA 158
           G KYLR+ER+   K++RKF LPENA+T A+SA C+ GVL V V KLPP  P KP+T+QV 
Sbjct: 102 GAKYLRMERRV-GKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVK 159

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BLAST of CmoCh14G012350 vs. Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-25
Identity = 66/125 (52.80%), Postives = 84/125 (67.20%), Query Frame = 1


Query: 39  REPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGE-- 98
           R+ + M++ P D+ D P  Y F +D+PGL  SDI+V VEEE  LVI   G+R+R  GE  
Sbjct: 45  RDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVI--SGERRRGGGEEE 104

Query: 99  -EEGCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLPP--PPKPKTV 158
            EE CKYLR+ER+   K +RKF LP+NAD   +SA C+ GVL V V KLPP  P KPKT+
Sbjct: 105 KEESCKYLRMERRM-GKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTI 164

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BLAST of CmoCh14G012350 vs. TrEMBL
Match: H6TB33_CITLA (HSP19 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-66
Identity = 132/153 (86.27%), Postives = 141/153 (92.16%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFIS--NDAREPKGMSSIPTDILDAPKEY 60
           MSRAADSNSSNGHLVQA+STLFP PE LEK  F S  +DAR+PK +S+IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAHDARDPKAISTIPTDILDTPSEY 60

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  IFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKAMRKFR 120

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPK 152
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPK
Sbjct: 121 LPENADVSAISAKCESGVLMVVVGKLPPPPKPK 153

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BLAST of CmoCh14G012350 vs. TrEMBL
Match: F6HXP8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00640 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-52
Identity = 110/160 (68.75%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISND--AREPKGMSSIPTDILDAPKEY 60
           MS  AD +  NG L   +S L   PEA++K AF S      E KG+S+IPTDI+D PKEY
Sbjct: 1   MSPVADLDVLNGDLAATVSQLLNFPEAIDKFAFPSRSHHTHEHKGLSTIPTDIMDTPKEY 60

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMD+PGL KSDIQVTVE++NTLVIRS GKRKREDGEEEGCKY+RLERKAPQK++RKFR
Sbjct: 61  LFYMDVPGLCKSDIQVTVEDDNTLVIRSHGKRKREDGEEEGCKYVRLERKAPQKLMRKFR 120

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 159
           LPENA+TSA+SAKCE+GVL VV+ K PPPPK KTV+V +A
Sbjct: 121 LPENANTSAISAKCENGVLTVVIEKHPPPPKSKTVEVNIA 160

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BLAST of CmoCh14G012350 vs. TrEMBL
Match: A5BUU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015797 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 7.7e-52
Identity = 108/157 (68.79%), Postives = 128/157 (81.53%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISND--AREPKGMSSIPTDILDAPKEY 60
           MS  AD +  NG L   +S L   PEA++K AF S      E KG+S+IPTDI+D PKEY
Sbjct: 34  MSPVADLDVLNGDLAATVSQLLNFPEAIDKFAFPSRSHHTHEHKGLSTIPTDIMDTPKEY 93

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMD+PGL KSDIQVTVE++NTLVIRS GKRKREDGEEEGCKY+RLERKAPQK++RKFR
Sbjct: 94  LFYMDVPGLCKSDIQVTVEDDNTLVIRSHGKRKREDGEEEGCKYVRLERKAPQKLMRKFR 153

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQV 156
           LPENA+TSA+SAKCE+GVL VV+ K PPPPK KTV++
Sbjct: 154 LPENANTSAISAKCENGVLTVVIEKHPPPPKSKTVEM 190

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BLAST of CmoCh14G012350 vs. TrEMBL
Match: M5WST3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012616mg PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-51
Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISN---DAREPKGMSSIPTDILDAPKE 60
           MS  ADS++ NG    A++ L   PE ++K  F S       E KG +SIP DILD+PKE
Sbjct: 1   MSGVADSSAFNGDFATAVNHLLNFPETIDKFMFPSRAHETNNENKGAASIPVDILDSPKE 60

Query: 61  YVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKF 120
           Y+F++DLPGLSKSDIQVTVE+ENTLVIRS GKRKREDGEEEGCKYLRLER+ PQK++RKF
Sbjct: 61  YIFFLDLPGLSKSDIQVTVEDENTLVIRSNGKRKREDGEEEGCKYLRLERRGPQKLLRKF 120

Query: 121 RLPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 159
           RLP+NA+  A+SAKCE+GVL VVV KLPPPPKPKTV+V+++
Sbjct: 121 RLPQNANVGAISAKCENGVLSVVVEKLPPPPKPKTVEVSIS 161

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BLAST of CmoCh14G012350 vs. TrEMBL
Match: A0A067L0A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24652 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-51
Identity = 109/160 (68.12%), Postives = 131/160 (81.88%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFIS--NDAREPKGMSSIPTDILDAPKEY 60
           MSR ADSN     +  A+S LF  PE++EK    S  N+A E KG+ +IP DILD  KEY
Sbjct: 1   MSRVADSN-----VFDAMSQLFSIPESIEKFMIHSRSNEANENKGVGAIPADILDTSKEY 60

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMD+PGLSK+DIQVTVE+E+TLVI+SGGKRKREDGEEEGCKY+RLER+A QK++RKFR
Sbjct: 61  IFYMDVPGLSKTDIQVTVEDESTLVIKSGGKRKREDGEEEGCKYIRLERRAQQKLMRKFR 120

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 159
           LPENA+ SA+SAKCE+GVL VVV KLPPPPKPK V+V V+
Sbjct: 121 LPENANVSAISAKCENGVLTVVVEKLPPPPKPKKVEVTVS 155

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BLAST of CmoCh14G012350 vs. TAIR10
Match: AT1G54050.1 (AT1G54050.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 167.5 bits (423), Expect = 6.4e-42
Identity = 90/151 (59.60%), Postives = 117/151 (77.48%), Query Frame = 1


Query: 17  AISTLFPSPEALEKLAF-------ISNDAREPKGMSSIPTDILDAPKEYVFYMDLPGLSK 76
           AI+  F  PEA+EKL          +N++R     ++IP DIL++PKEY+FY+D+PG+SK
Sbjct: 5   AINHFFGLPEAIEKLILPISRSGESNNESRGRGSSNNIPIDILESPKEYIFYLDIPGISK 64

Query: 77  SDIQVTVEEENTLVIRSGGKRKREDGE-EEGCKYLRLERKAPQKMVRKFRLPENADTSAV 136
           SDIQVTVEEE TLVI+S GKRKR+D E EEG KY+RLER+  Q +V+KFRLPE+AD ++V
Sbjct: 65  SDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDADMASV 124

Query: 137 SAKCESGVLVVVVGKLPP-PPKPKTVQVAVA 159
           +AK + GVL VV+ KLPP PPKPKTVQ+AV+
Sbjct: 125 TAKYQEGVLTVVIKKLPPQPPKPKTVQIAVS 155

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BLAST of CmoCh14G012350 vs. TAIR10
Match: AT5G12030.1 (AT5G12030.1 heat shock protein 17.6A)

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 60/122 (49.18%), Postives = 85/122 (69.67%), Query Frame = 1


Query: 39  REPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 98
           R+ K M++ P D+++ P  YVF +D+PG+   +IQV +E EN LV+   GKR+R++ E E
Sbjct: 38  RDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVV--SGKRQRDNKENE 97

Query: 99  GCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLPP--PPKPKTVQVA 158
           G K++R+ER+   K +RKF+LP+NAD   +SA C  GVL V + KLPP  P KPKT+QV 
Sbjct: 98  GVKFVRMERRM-GKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPKTIQVQ 156

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BLAST of CmoCh14G012350 vs. TAIR10
Match: AT5G12020.1 (AT5G12020.1 17.6 kDa class II heat shock protein)

HSP 1 Score: 115.2 bits (287), Expect = 3.8e-26
Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 1


Query: 39  REPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEE 98
           R+ K M++ P D+++ P  Y F +D+PG+   +I+V VE +N LV+   G+R+RE+ E E
Sbjct: 37  RDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVV--SGERQRENKENE 96

Query: 99  GCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLPP--PPKPKTVQVA 158
           G KY+R+ER+   K +RKF+LPENAD   +SA C  GVL V V KLPP  P KPKT+QV 
Sbjct: 97  GVKYVRMERRM-GKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQ 155

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BLAST of CmoCh14G012350 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-15
Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 1


Query: 35  SNDAREPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKRED 94
           ++ AR+    ++   D  + P+ +VF  DLPGL K +++V VE++N L I   G+R +E+
Sbjct: 40  ASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQI--SGERSKEN 99

Query: 95  GEEEGCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLP-PPPKPKTV 154
            EE+  K+ R+ER A  K +R+FRLPENA    V A  E+GVL VVV K P   P+ K++
Sbjct: 100 -EEKNDKWHRVER-ASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSI 159

Query: 155 QVAVA 159
            ++ A
Sbjct: 160 DISGA 160

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BLAST of CmoCh14G012350 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.2e-13
Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = 1


Query: 38  AREPKGMSSIPTDILDAPKEYVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEE 97
           A +    ++   D  + P+ +VF  DLPGL K +++V VE+ N L I   G+R  E+ EE
Sbjct: 41  AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQI--SGERSNEN-EE 100

Query: 98  EGCKYLRLERKAPQKMVRKFRLPENADTSAVSAKCESGVLVVVVGKLP-PPPKPKTVQVA 157
           +  K+ R+ER +  K  R+FRLPENA    + A  E+GVL V V K+P   P+ K++ ++
Sbjct: 101 KNDKWHRVERSSG-KFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

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BLAST of CmoCh14G012350 vs. NCBI nr
Match: gi|315932700|gb|ADU55780.1| (HSP19 [Citrullus lanatus])

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-66
Identity = 132/153 (86.27%), Postives = 141/153 (92.16%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFIS--NDAREPKGMSSIPTDILDAPKEY 60
           MSRAADSNSSNGHLVQA+STLFP PE LEK  F S  +DAR+PK +S+IPTDILD P EY
Sbjct: 1   MSRAADSNSSNGHLVQAVSTLFPFPETLEKFVFNSGAHDARDPKAISTIPTDILDTPSEY 60

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQK +RKFR
Sbjct: 61  IFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKAMRKFR 120

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPK 152
           LPENAD SA+SAKCESGVL+VVVGKLPPPPKPK
Sbjct: 121 LPENADVSAISAKCESGVLMVVVGKLPPPPKPK 153

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BLAST of CmoCh14G012350 vs. NCBI nr
Match: gi|1009111692|ref|XP_015902194.1| (PREDICTED: 17.4 kDa class III heat shock protein [Ziziphus jujuba])

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-54
Identity = 111/160 (69.38%), Postives = 136/160 (85.00%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFIS--NDAREPKGMSSIPTDILDAPKEY 60
           MSRAADS++ NG L  A++  F  PE LEK  F S  ++  + KG+SSIP DILDA KEY
Sbjct: 1   MSRAADSSAFNGDLASAVNNFFNFPETLEKFVFPSRAHEHNDNKGVSSIPVDILDAQKEY 60

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +F+MD+PGLSKSDIQVTVE+E+TLVIRSGGKRKRE+GEEEGCKYLRLER+ P+K++RKFR
Sbjct: 61  IFFMDVPGLSKSDIQVTVEDESTLVIRSGGKRKREEGEEEGCKYLRLERRPPKKLLRKFR 120

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 159
           LPENA+ SA++AKCE+GVL VVV KLPPPPKPKTV+V ++
Sbjct: 121 LPENANVSAITAKCENGVLTVVVEKLPPPPKPKTVEVTIS 160

[Close]

BLAST of CmoCh14G012350 vs. NCBI nr
Match: gi|225442022|ref|XP_002268705.1| (PREDICTED: 17.4 kDa class III heat shock protein [Vitis vinifera])

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 110/160 (68.75%), Postives = 130/160 (81.25%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISND--AREPKGMSSIPTDILDAPKEY 60
           MS  AD +  NG L   +S L   PEA++K AF S      E KG+S+IPTDI+D PKEY
Sbjct: 1   MSPVADLDVLNGDLAATVSQLLNFPEAIDKFAFPSRSHHTHEHKGLSTIPTDIMDTPKEY 60

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMD+PGL KSDIQVTVE++NTLVIRS GKRKREDGEEEGCKY+RLERKAPQK++RKFR
Sbjct: 61  LFYMDVPGLCKSDIQVTVEDDNTLVIRSHGKRKREDGEEEGCKYVRLERKAPQKLMRKFR 120

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 159
           LPENA+TSA+SAKCE+GVL VV+ K PPPPK KTV+V +A
Sbjct: 121 LPENANTSAISAKCENGVLTVVIEKHPPPPKSKTVEVNIA 160

[Close]

BLAST of CmoCh14G012350 vs. NCBI nr
Match: gi|645243783|ref|XP_008228133.1| (PREDICTED: 17.4 kDa class III heat shock protein [Prunus mume])

HSP 1 Score: 212.2 bits (539), Expect = 6.4e-52
Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISN---DAREPKGMSSIPTDILDAPKE 60
           MSR ADS++ NG    A++ L   PE ++K    S       E KG +SIP DILD+PKE
Sbjct: 1   MSRVADSSAFNGDFATAVNHLLNFPETIDKFMLPSRAHETNNENKGAASIPVDILDSPKE 60

Query: 61  YVFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKF 120
           Y+F++DLPGLSKSDIQVTVE+ENTLVIRS GKRKREDGEEEGCKYLRLER+ PQK++RKF
Sbjct: 61  YIFFLDLPGLSKSDIQVTVEDENTLVIRSNGKRKREDGEEEGCKYLRLERRGPQKLLRKF 120

Query: 121 RLPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQVAVA 159
           RLP+NA+  A+SAKCE+GVL VVV KLPPPPKPKTV+V+++
Sbjct: 121 RLPQNANVGAISAKCENGVLTVVVEKLPPPPKPKTVEVSIS 161

[Close]

BLAST of CmoCh14G012350 vs. NCBI nr
Match: gi|147782666|emb|CAN61792.1| (hypothetical protein VITISV_015797 [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 108/157 (68.79%), Postives = 128/157 (81.53%), Query Frame = 1


Query: 1   MSRAADSNSSNGHLVQAISTLFPSPEALEKLAFISND--AREPKGMSSIPTDILDAPKEY 60
           MS  AD +  NG L   +S L   PEA++K AF S      E KG+S+IPTDI+D PKEY
Sbjct: 34  MSPVADLDVLNGDLAATVSQLLNFPEAIDKFAFPSRSHHTHEHKGLSTIPTDIMDTPKEY 93

Query: 61  VFYMDLPGLSKSDIQVTVEEENTLVIRSGGKRKREDGEEEGCKYLRLERKAPQKMVRKFR 120
           +FYMD+PGL KSDIQVTVE++NTLVIRS GKRKREDGEEEGCKY+RLERKAPQK++RKFR
Sbjct: 94  LFYMDVPGLCKSDIQVTVEDDNTLVIRSHGKRKREDGEEEGCKYVRLERKAPQKLMRKFR 153

Query: 121 LPENADTSAVSAKCESGVLVVVVGKLPPPPKPKTVQV 156
           LPENA+TSA+SAKCE+GVL VV+ K PPPPK KTV++
Sbjct: 154 LPENANTSAISAKCENGVLTVVIEKHPPPPKSKTVEM 190

The following BLAST results are available for this feature:

BLAST of CmoCh14G012350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HS174_ARATH	1.1e-40	59.60	17.4 kDa class III heat shock protein OS=Arabidopsis thaliana GN=HSP17.4B PE=2 S...	[more]
HS186_ORYSJ	3.4e-29	48.19	18.6 kDa class III heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.6...	[more]
HSP21_SOLPE	2.7e-26	53.28	17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP21_SOYBN	1.4e-25	54.10	17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1	[more]
HSP18_ORYSJ	3.0e-25	52.80	18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 ...	[more]

BLAST of CmoCh14G012350 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB33_CITLA	1.1e-66	86.27	HSP19 OS=Citrullus lanatus PE=2 SV=1	[more]
F6HXP8_VITVI	1.5e-52	68.75	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00640 PE=3 SV=...	[more]
A5BUU6_VITVI	7.7e-52	68.79	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015797 PE=3 SV=1	[more]
M5WST3_PRUPE	1.0e-51	66.46	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012616mg PE=3 SV=1	[more]
A0A067L0A5_JATCU	2.2e-51	68.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24652 PE=3 SV=1	[more]

BLAST of CmoCh14G012350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54050.1	6.4e-42	59.60	HSP20-like chaperones superfamily protein	[more]
AT5G12030.1	2.2e-26	49.18	heat shock protein 17.6A	[more]
AT5G12020.1	3.8e-26	50.00	17.6 kDa class II heat shock protein	[more]
AT5G59720.1	3.9e-15	40.80	heat shock protein 18.2	[more]
AT1G53540.1	8.2e-13	38.33	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh14G012350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932700\|gb\|ADU55780.1\|	1.6e-66	86.27	HSP19 [Citrullus lanatus]	[more]
gi\|1009111692\|ref\|XP_015902194.1\|	1.8e-54	69.38	PREDICTED: 17.4 kDa class III heat shock protein [Ziziphus jujuba]	[more]
gi\|225442022\|ref\|XP_002268705.1\|	2.2e-52	68.75	PREDICTED: 17.4 kDa class III heat shock protein [Vitis vinifera]	[more]
gi\|645243783\|ref\|XP_008228133.1\|	6.4e-52	66.46	PREDICTED: 17.4 kDa class III heat shock protein [Prunus mume]	[more]
gi\|147782666\|emb\|CAN61792.1\|	1.1e-51	68.79	hypothetical protein VITISV_015797 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G012350.1	CmoCh14G012350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..155 score: 5.2
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 50..143 score: 20
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 35..157 score: 1.8
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 34..152 score: 1.5
None	No IPR available	PANTHER	PTHR11527:SF106	17.4 KDA CLASS III HEAT SHOCK PROTEIN	coord: 14..158 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G012350	CmaCh14G012060	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G012350	Cla012545	Watermelon (97103) v1	cmowmB218
CmoCh14G012350	ClCG07G014370	Watermelon (Charleston Gray)	cmowcgB230
CmoCh14G012350	Lsi07G006520	Bottle gourd (USVL1VR-Ls)	cmolsiB244
CmoCh14G012350	Cp4.1LG03g14960	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G012350	Cla97C07G141250	Watermelon (97103) v2	cmowmbB255
CmoCh14G012350	Bhi01G002225	Wax gourd	cmowgoB0319
CmoCh14G012350	Carg06384	Silver-seed gourd	carcmoB0163

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G012350	Cucumber (Gy14) v2	cgybcmoB283
CmoCh14G012350	Cucumber (Gy14) v2	cgybcmoB896
CmoCh14G012350	Melon (DHL92) v3.6.1	cmomedB233
CmoCh14G012350	Melon (DHL92) v3.6.1	cmomedB240
CmoCh14G012350	Silver-seed gourd	carcmoB0283
CmoCh14G012350	Silver-seed gourd	carcmoB0817
CmoCh14G012350	Silver-seed gourd	carcmoB1036
CmoCh14G012350	Cucumber (Chinese Long) v3	cmocucB0273
CmoCh14G012350	Cucumber (Chinese Long) v3	cmocucB0316
CmoCh14G012350	Watermelon (97103) v2	cmowmbB262
CmoCh14G012350	Wax gourd	cmowgoB0352
CmoCh14G012350	Cucurbita moschata (Rifu)	cmocmoB200
CmoCh14G012350	Cucurbita moschata (Rifu)	cmocmoB202
CmoCh14G012350	Cucurbita moschata (Rifu)	cmocmoB231
CmoCh14G012350	Cucumber (Gy14) v1	cgycmoB0410
CmoCh14G012350	Cucumber (Gy14) v1	cgycmoB0984
CmoCh14G012350	Cucurbita maxima (Rimu)	cmacmoB352
CmoCh14G012350	Cucurbita maxima (Rimu)	cmacmoB461
CmoCh14G012350	Cucurbita maxima (Rimu)	cmacmoB881
CmoCh14G012350	Wild cucumber (PI 183967)	cmocpiB234
CmoCh14G012350	Wild cucumber (PI 183967)	cmocpiB269
CmoCh14G012350	Cucumber (Chinese Long) v2	cmocuB230
CmoCh14G012350	Cucumber (Chinese Long) v2	cmocuB262
CmoCh14G012350	Melon (DHL92) v3.5.1	cmomeB206
CmoCh14G012350	Melon (DHL92) v3.5.1	cmomeB211
CmoCh14G012350	Watermelon (Charleston Gray)	cmowcgB202
CmoCh14G012350	Watermelon (97103) v1	cmowmB207
CmoCh14G012350	Cucurbita pepo (Zucchini)	cmocpeB226
CmoCh14G012350	Cucurbita pepo (Zucchini)	cmocpeB235
CmoCh14G012350	Cucurbita pepo (Zucchini)	cmocpeB244
CmoCh14G012350	Bottle gourd (USVL1VR-Ls)	cmolsiB226