CmoCh14G011980 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G011980
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLipid transfer protein
LocationCmo_Chr14 : 10133349 .. 10133639 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATTCCCCATCACAATTGCTTTCCTTTTCATGGCGGTGATGGTGGCGCTTCTGAGCGGAGCTCGTGTGGCGGAGGCTGTGAACTGCAGCCCTATGGAGCTGTCCTCATGTGCGGGGGCCATCACGTCGTCGTCGACCCCATCCAGCACTTGTTGCAACAAGTTGAGAGAGCAAAAACCATGCCTTTGCGGTTATATAAGGAATCCAGCTTTGAGGCCTTACGTGCAATCTCCTGGCGCCAGAAAGGTTGCTGCCAAGTGTGGCGTTCCCTTCCCCAGCTGCTAG

mRNA sequence

ATGAAGAAATTCCCCATCACAATTGCTTTCCTTTTCATGGCGGTGATGGTGGCGCTTCTGAGCGGAGCTCGTGTGGCGGAGGCTGTGAACTGCAGCCCTATGGAGCTGTCCTCATGTGCGGGGGCCATCACGTCGTCGTCGACCCCATCCAGCACTTGTTGCAACAAGTTGAGAGAGCAAAAACCATGCCTTTGCGGTTATATAAGGAATCCAGCTTTGAGGCCTTACGTGCAATCTCCTGGCGCCAGAAAGGTTGCTGCCAAGTGTGGCGTTCCCTTCCCCAGCTGCTAG

Coding sequence (CDS)

ATGAAGAAATTCCCCATCACAATTGCTTTCCTTTTCATGGCGGTGATGGTGGCGCTTCTGAGCGGAGCTCGTGTGGCGGAGGCTGTGAACTGCAGCCCTATGGAGCTGTCCTCATGTGCGGGGGCCATCACGTCGTCGTCGACCCCATCCAGCACTTGTTGCAACAAGTTGAGAGAGCAAAAACCATGCCTTTGCGGTTATATAAGGAATCCAGCTTTGAGGCCTTACGTGCAATCTCCTGGCGCCAGAAAGGTTGCTGCCAAGTGTGGCGTTCCCTTCCCCAGCTGCTAG
Homology
[Close]
BLAST of CmoCh14G011980 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 1 

Query: 3  KFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQKP 62
          K  +++    + V + L+    VAEAV C+P ELSSC  AIT  S PSSTCC+KL+ Q+P
Sbjct: 6  KMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEP 65

Query: 63 CLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          CLC YI+NP+L+ YV SPGA+KV + CGV +P+C
Sbjct: 66 CLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]
BLAST of CmoCh14G011980 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-20
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 1 

Query: 29 VNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGYIRNPALRPYVQSPGARKVAAK 88
          V CSP++LS C G I S +   +TCC KLREQ+PCLCGY++NP+LR YV SP ARK+A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 89 CGVPFPSC 97
          CGVP P C
Sbjct: 61 CGVPVPQC 68

[Close]
BLAST of CmoCh14G011980 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-17
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 1 

Query: 31 CSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGYIRNPALRPYVQSPGARKVAAKCG 90
          CS ++LS C  AIT ++ PS+ CCNKL+EQKPCLCGY+++P L+ YV SPGARK A+ CG
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 91 V 92
          V
Sbjct: 63 V 63

[Close]
BLAST of CmoCh14G011980 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-12
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 11  LFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGYIRN 70
           + M ++V L +GA       C P +L+ CA AI   + PS  CC  LR Q+ CLC Y+++
Sbjct: 17  VMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQYVKD 76

Query: 71  PALRPYVQSPGARKVAAKCGVPFPSC 97
           P    YV SP AR     CG+P P C
Sbjct: 77  PNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]
BLAST of CmoCh14G011980 vs. Swiss-Prot
Match: NLT2G_WHEAT (Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11
Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MKK  +T   L + V+ A   GAR A    C   +L+ CA AI S + PS  CC  LR Q
Sbjct: 5  MKKQVVTALMLALVVLAAAPGGARAA----CQASQLAVCASAILSGAKPSGECCGNLRAQ 64

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          + C C Y ++P    Y++SP AR     CG+  P C
Sbjct: 65 QGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 96

[Close]
BLAST of CmoCh14G011980 vs. TrEMBL
Match: I1N5L5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.3e-25
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          M K     A + MA +  L+  + +AEAV CSP+ELS C GAITSSS PS+TCC K+REQ
Sbjct: 3  MMKKVCGFAIVVMAALF-LVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQ 62

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +PCLCGY++NP+LRPYV SPG+R+VA+ CGVPFP+C
Sbjct: 63 RPCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of CmoCh14G011980 vs. TrEMBL
Match: A0A0B2QIV0_GLYSO (Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_037194 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.3e-25
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          M K     A + MA +  L+  + +AEAV CSP+ELS C GAITSSS PS+TCC K+REQ
Sbjct: 3  MMKKVCGFAIVVMAALF-LVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQ 62

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +PCLCGY++NP+LRPYV SPG+R+VA+ CGVPFP+C
Sbjct: 63 RPCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of CmoCh14G011980 vs. TrEMBL
Match: A0A151RN87_CAJCA (Non-specific lipid-transfer protein 2 OS=Cajanus cajan GN=KK1_034539 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-24
Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MKK   T A + +A++  L+      E+V CSP+ELS C GAITSSS PSSTCC K+REQ
Sbjct: 3  MKKKVCTYAIVLVALL--LVEVIPKGESVTCSPVELSPCLGAITSSSPPSSTCCQKVREQ 62

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +PCLCGY++NP+LR YV SPGAR+VA+ CGVPFP+C
Sbjct: 63 RPCLCGYLKNPSLRQYVNSPGARRVASSCGVPFPTC 96

[Close]
BLAST of CmoCh14G011980 vs. TrEMBL
Match: B9H330_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.1e-24
Identity = 57/96 (59.38%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MKK  + +    M V+V LL+ A+V++AV C+P +LS C  AI+SSS PS+TCC+KL+EQ
Sbjct: 1  MKKASLLVT---MVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQ 60

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          KPCLCGY+++PAL+ +V SPGARKVA+ CGVP+PSC
Sbjct: 61 KPCLCGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

[Close]
BLAST of CmoCh14G011980 vs. TrEMBL
Match: A0A0B2S483_GLYSO (Non-specific lipid-transfer protein 2 OS=Glycine soja GN=glysoja_035381 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.1e-24
Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MKK     A + +  +V L+   + AEAV CSP+ELS C GAITSSS PS+TCC K+REQ
Sbjct: 4  MKKVCGGFALIVLVALVLLVIPPK-AEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQ 63

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +PCLCGY++NP+LR YV SPG+R+VA+ CGVPFP+C
Sbjct: 64 RPCLCGYLQNPSLRQYVNSPGSRRVASSCGVPFPTC 98

[Close]
BLAST of CmoCh14G011980 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-24
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 1 

Query: 8  IAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGY 67
          ++ L +A  + LL+   VAE V CSPM+L+SCA A+TSSS PS  CC KLREQ+PCLCGY
Sbjct: 7  VSVLALAAAILLLT-VPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCGY 66

Query: 68 IRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +RNP LR YV SP ARKV+  C +P PSC
Sbjct: 67 MRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]
BLAST of CmoCh14G011980 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 6.3e-24
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 1 

Query: 7  TIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCG 66
          T+  LF    V L+  A  AEAV CSPM+LS CA AITSSS PS+ CC KL+EQ+PCLCG
Sbjct: 7  TMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCG 66

Query: 67 YIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          Y+RNP+LR +V +P ARKV+  C +P P C
Sbjct: 67 YMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]
BLAST of CmoCh14G011980 vs. TAIR10
Match: AT5G38195.1 (AT5G38195.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-15
Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MK   IT+  + M+  + + S      + +C P EL  C  A+T+   P+  CC+KL EQ
Sbjct: 4  MKLMVITVVIVVMSSPILIKSEV----SSSCIPTELMPCLPAMTTGGQPTKDCCDKLIEQ 63

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          K CLCGYI NP    +V SP ARKV   C +P+PSC
Sbjct: 64 KECLCGYINNPLYSTFVSSPVARKVLEVCNIPYPSC 95

[Close]
BLAST of CmoCh14G011980 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 6.9e-15
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 1 

Query: 29  VNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGYIRNPALRPYVQSPGARKVAAK 88
           V C  ++LSSCA  + +   PS+ CC KL+EQ+PC C YI++P    YV S  A+K  A 
Sbjct: 36  VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLAT 95

Query: 89  CGVPFPSC 97
           CGVP+P+C
Sbjct: 96  CGVPYPTC 103

[Close]
BLAST of CmoCh14G011980 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.6e-14
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1 

Query: 15  VMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQKPCLCGYIRNPALR 74
           V   ++ G+     V C   +LSSC  A+++ + PS+ CC KL+E + CLC YI+NP   
Sbjct: 22  VKARVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYS 81

Query: 75  PYVQSPGARKVAAKCGVPFPSC 97
            YV SP ARK  A C V +P+C
Sbjct: 82  SYVTSPNARKTLAACDVAYPTC 103

[Close]
BLAST of CmoCh14G011980 vs. NCBI nr
Match: gi|659086721|ref|XP_008444081.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-27
Identity = 63/95 (66.32%), Postives = 76/95 (80.00%), Query Frame = 1 

Query: 2  KKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQK 61
          K  P T+  LF+   VA+L   RVAEAV+C+P+ELSSC+GAITS + PSS CCNKL++QK
Sbjct: 3  KVLPFTVVCLFV---VAVLGRVRVAEAVSCNPVELSSCSGAITSGTNPSSICCNKLKQQK 62

Query: 62 PCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
           CLCGYI+NPAL PYV SPGA+ VA+KCGVP PSC
Sbjct: 63 ACLCGYIKNPALGPYVNSPGAKNVASKCGVPIPSC 94

[Close]
BLAST of CmoCh14G011980 vs. NCBI nr
Match: gi|734371828|gb|KHN19692.1| (Putative non-specific lipid-transfer protein AKCS9 [Glycine soja])

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          M K     A + MA +  L+  + +AEAV CSP+ELS C GAITSSS PS+TCC K+REQ
Sbjct: 3  MMKKVCGFAIVVMAALF-LVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQ 62

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +PCLCGY++NP+LRPYV SPG+R+VA+ CGVPFP+C
Sbjct: 63 RPCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of CmoCh14G011980 vs. NCBI nr
Match: gi|1012332591|gb|KYP44017.1| (Non-specific lipid-transfer protein 2 [Cajanus cajan])

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-24
Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MKK   T A + +A++  L+      E+V CSP+ELS C GAITSSS PSSTCC K+REQ
Sbjct: 3  MKKKVCTYAIVLVALL--LVEVIPKGESVTCSPVELSPCLGAITSSSPPSSTCCQKVREQ 62

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          +PCLCGY++NP+LR YV SPGAR+VA+ CGVPFP+C
Sbjct: 63 RPCLCGYLKNPSLRQYVNSPGARRVASSCGVPFPTC 96

[Close]
BLAST of CmoCh14G011980 vs. NCBI nr
Match: gi|224079367|ref|XP_002305838.1| (hypothetical protein POPTR_0004s09510g [Populus trichocarpa])

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-24
Identity = 57/96 (59.38%), Postives = 77/96 (80.21%), Query Frame = 1 

Query: 1  MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
          MKK  + +    M V+V LL+ A+V++AV C+P +LS C  AI+SSS PS+TCC+KL+EQ
Sbjct: 1  MKKASLLVT---MVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQ 60

Query: 61 KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
          KPCLCGY+++PAL+ +V SPGARKVA+ CGVP+PSC
Sbjct: 61 KPCLCGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

[Close]
BLAST of CmoCh14G011980 vs. NCBI nr
Match: gi|947084850|gb|KRH33571.1| (hypothetical protein GLYMA_10G132500 [Glycine max])

HSP 1 Score: 118.6 bits (296), Expect = 5.9e-24
Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 1 

Query: 1   MKKFPITIAFLFMAVMVALLSGARVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKLREQ 60
           MKK     A + +  +V L+   + AEAV CSP+ELS C GAITSSS PS+TCC K+REQ
Sbjct: 6   MKKVCGGFALIVLVALVLLVIPPK-AEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQ 65

Query: 61  KPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPSC 97
           +PCLCGY++NP+LR YV SPG+R+VA+ CGVPFP+C
Sbjct: 66  RPCLCGYLQNPSLRQYVNSPGSRRVASSCGVPFPTC 100

The following BLAST results are available for this feature:
BLAST of CmoCh14G011980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP_VIGUN2.5e-2253.19Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_PRUAR3.0e-2061.76Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP2_APIGA2.4e-1762.30Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
NLTP2_HORVU1.0e-1240.70Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=... [more]
NLT2G_WHEAT1.2e-1139.58Non-specific lipid-transfer protein 2G OS=Triticum aestivum PE=1 SV=2[more]
BLAST of CmoCh14G011980 vs. TrEMBL
Match NameE-valueIdentityDescription
I1N5L5_SOYBN8.3e-2561.46Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1[more]
A0A0B2QIV0_GLYSO8.3e-2561.46Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_03... [more]
A0A151RN87_CAJCA1.8e-2461.46Non-specific lipid-transfer protein 2 OS=Cajanus cajan GN=KK1_034539 PE=4 SV=1[more]
B9H330_POPTR3.1e-2459.38Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1[more]
A0A0B2S483_GLYSO4.1e-2460.42Non-specific lipid-transfer protein 2 OS=Glycine soja GN=glysoja_035381 PE=4 SV=... [more]
BLAST of CmoCh14G011980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48750.11.3e-2460.67 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G18280.16.3e-2458.89 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38195.13.1e-1542.71 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38170.16.9e-1548.53 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38160.12.6e-1442.68 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of CmoCh14G011980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086721|ref|XP_008444081.1|2.6e-2766.32PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|734371828|gb|KHN19692.1|1.2e-2461.46Putative non-specific lipid-transfer protein AKCS9 [Glycine soja][more]
gi|1012332591|gb|KYP44017.1|2.6e-2461.46Non-specific lipid-transfer protein 2 [Cajanus cajan][more]
gi|224079367|ref|XP_002305838.1|4.5e-2459.38hypothetical protein POPTR_0004s09510g [Populus trichocarpa][more]
gi|947084850|gb|KRH33571.1|5.9e-2460.42hypothetical protein GLYMA_10G132500 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G011980.1CmoCh14G011980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 13..93
score: 6.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 31..96
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 30..96
score: 9.92
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 30..96
score: 7.3
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 1..96
score: 9.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G011980Bhi01G001685Wax gourdcmowgoB0312
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G011980Cucurbita moschata (Rifu)cmocmoB204
CmoCh14G011980Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G011980Cucurbita maxima (Rimu)cmacmoB463
CmoCh14G011980Melon (DHL92) v3.5.1cmomeB234
CmoCh14G011980Cucurbita pepo (Zucchini)cmocpeB242
CmoCh14G011980Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G011980Melon (DHL92) v3.6.1cmomedB266
CmoCh14G011980Silver-seed gourdcarcmoB0445