CmoCh14G011950 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G011950
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionLipid transfer protein
LocationCmo_Chr14 : 10085602 .. 10085886 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG

mRNA sequence

ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG

Coding sequence (CDS)

ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG
Homology
[Close]
BLAST of CmoCh14G011950 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-19
Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 1 

Query: 1  MKKRLCLLVAVVAMVVLLTGAG-VAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 60
          MK ++ ++ AVV + + L   G VAEAV C+P E+ +C+PAI     P++ CC K+K QE
Sbjct: 5  MKMKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQE 64

Query: 61 GCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
           CLC Y+K+P LK Y+ SP AKK+ S+CGV  P C
Sbjct: 65 PCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]
BLAST of CmoCh14G011950 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.5e-16
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1 

Query: 27 VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASS 86
          V C P+++  CL  I S  P    CC K+++Q  CLC YLK+P L+ Y+ SPNA+K+AS+
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 87 CGVPIPTC 95
          CGVP+P C
Sbjct: 61 CGVPVPQC 68

[Close]
BLAST of CmoCh14G011950 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-14
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 1 

Query: 1   MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 60
           M+K   + V +V +V L  GA       C+P ++  C  AI     P+ ECC  ++ Q+G
Sbjct: 9   MRKEAAVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQG 68

Query: 61  CLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
           CLC+Y+K P    Y+ SP+A+   + CG+P+P C
Sbjct: 69  CLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]
BLAST of CmoCh14G011950 vs. Swiss-Prot
Match: NLTPX_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-14
Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 1 

Query: 1  MKKRLCLLVAVVAMVVLLTGAGVAEA-VKCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 60
          M +RL +LV  VAMV    G  V  A   C+  ++  C  AI     PTA CC  ++ Q+
Sbjct: 1  MMRRLAVLVLAVAMVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQ 60

Query: 61 GCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
          GC C++ K P    Y+ SPNA+K  SSCG+ +PTC
Sbjct: 61 GCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 95

[Close]
BLAST of CmoCh14G011950 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.2e-14
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 

Query: 29 CDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCG 88
          C  +++  CL AI  + PP+A CC+K+K+Q+ CLC YLK P LK Y+ SP A+K ASSCG
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 89 VPI 92
          V +
Sbjct: 63 VAL 65

[Close]
BLAST of CmoCh14G011950 vs. TrEMBL
Match: A0A0A0KW09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-30
Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 5   LCLLVAVVAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGC 64
           LCL V V+AMV+   L+TGAG+A+AV C+PMEMR CLPA++SS PPTAECC+K+K+QE C
Sbjct: 10  LCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 65  LCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
            C YLKSP+ KPYLESPNAKKIA+SC VPIPTC
Sbjct: 70  FCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of CmoCh14G011950 vs. TrEMBL
Match: B9H330_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-20
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1 

Query: 3  KRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCL 62
          K+  LLV +V +V+LL  A V++AV C+P ++  CLPAI SS PP+  CC K+K+Q+ CL
Sbjct: 2  KKASLLVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCL 61

Query: 63 CEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
          C YLK P LK ++ SP A+K+AS+CGVP P+C
Sbjct: 62 CGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

[Close]
BLAST of CmoCh14G011950 vs. TrEMBL
Match: A5JUZ7_SESIN (Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.6e-20
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 1 

Query: 1  MKKRLCLLVAVVAMVVLLTGAGVAE--AVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQ 60
          MKK    +  VVA+VV+L  A V E  A  C+P+E+  CL AI  S+PP+AECC K+K+Q
Sbjct: 1  MKKGAAAVWWVVAIVVVLAVAEVHETGAAPCNPVELSPCLAAISGSQPPSAECCSKLKEQ 60

Query: 61 EGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
            C C+Y+K+P+ KPY++SPNAKK+A++CGV  PTC
Sbjct: 61 VPCFCDYVKNPVFKPYVDSPNAKKVAATCGVAFPTC 96

[Close]
BLAST of CmoCh14G011950 vs. TrEMBL
Match: A0A0B2QIV0_GLYSO (Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_037194 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = 1 

Query: 1  MKKRLC-LLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 60
          M K++C   + V+A + L+  + +AEAV C P+E+  CL AI SS PP+  CC KV++Q 
Sbjct: 3  MMKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQR 62

Query: 61 GCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
           CLC YLK+P L+PY+ SP ++++ASSCGVP PTC
Sbjct: 63 PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of CmoCh14G011950 vs. TrEMBL
Match: I1N5L5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-19
Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = 1 

Query: 1  MKKRLC-LLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQE 60
          M K++C   + V+A + L+  + +AEAV C P+E+  CL AI SS PP+  CC KV++Q 
Sbjct: 3  MMKKVCGFAIVVMAALFLVEMSPMAEAVTCSPVELSPCLGAITSSSPPSTTCCQKVREQR 62

Query: 61 GCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
           CLC YLK+P L+PY+ SP ++++ASSCGVP PTC
Sbjct: 63 PCLCGYLKNPSLRPYVNSPGSRRVASSCGVPFPTC 97

[Close]
BLAST of CmoCh14G011950 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 3.5e-19
Identity = 40/94 (42.55%), Postives = 64/94 (68.09%), Query Frame = 1 

Query: 1  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 60
          M K + + V  +A  +LL    VAE V C PM++ +C  A+ SS PP+  CC K+++Q+ 
Sbjct: 1  MVKVMWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQP 60

Query: 61 CLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
          CLC Y+++P L+ Y+ SPNA+K+++SC +P P+C
Sbjct: 61 CLCGYMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]
BLAST of CmoCh14G011950 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 2.3e-18
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 1 

Query: 1  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 60
          M K   + +  +A V+L+  A  AEAV C PM++  C  AI SS PP+A CC K+K+Q  
Sbjct: 3  MIKTTMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRP 62

Query: 61 CLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
          CLC Y+++P L+ ++ +PNA+K++ SC +PIP C
Sbjct: 63 CLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]
BLAST of CmoCh14G011950 vs. TAIR10
Match: AT1G07747.1 (AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 6.8e-15
Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 1 

Query: 1  MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEG 60
          MK +   LV V  ++  +      E   C   +++ACLP I    PP+ +CC K+K ++ 
Sbjct: 1  MKMKFTTLVFVAFVLSSMAPTKAEEKAACVVTDLKACLPDIIGETPPSTKCCTKLKDKKS 60

Query: 61 CLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
          C CEYLK+P++ PY+ S  AK++  +CGVP+P C
Sbjct: 61 CFCEYLKNPLIAPYMTS--AKQVLEACGVPVPVC 92

[Close]
BLAST of CmoCh14G011950 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 8.9e-15
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 1 

Query: 9   VAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKS 68
           V V A VV   G+G    V CD  ++ +C+ A+ +  PP+ +CC K+K+ E CLC Y+++
Sbjct: 20  VPVKARVV--KGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQN 79

Query: 69  PILKPYLESPNAKKIASSCGVPIPTC 95
           P+   Y+ SPNA+K  ++C V  PTC
Sbjct: 80  PLYSSYVTSPNARKTLAACDVAYPTC 103

[Close]
BLAST of CmoCh14G011950 vs. TAIR10
Match: AT2G14846.1 (AT2G14846.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-14
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1 

Query: 25 EAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIA 84
          E V C   ++R CLPA+++   P+ +CC K+K+Q  CLC YLK P    Y+ S  A+K+ 
Sbjct: 30 EKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVL 89

Query: 85 SSCGVPIPTC 95
          ++C +PIP C
Sbjct: 90 TACAIPIPKC 99

[Close]
BLAST of CmoCh14G011950 vs. NCBI nr
Match: gi|700198657|gb|KGN53815.1| (hypothetical protein Csa_4G141230 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 7.0e-30
Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 1 

Query: 5   LCLLVAVVAMVV---LLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGC 64
           LCL V V+AMV+   L+TGAG+A+AV C+PMEMR CLPA++SS PPTAECC+K+K+QE C
Sbjct: 10  LCLSVPVMAMVMVVALITGAGLADAVNCNPMEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 65  LCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
            C YLKSP+ KPYLESPNAKKIA+SC VPIPTC
Sbjct: 70  FCAYLKSPVFKPYLESPNAKKIATSCRVPIPTC 102

[Close]
BLAST of CmoCh14G011950 vs. NCBI nr
Match: gi|659086709|ref|XP_008444077.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28
Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 1 

Query: 5   LCL---LVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGC 64
           LCL   ++A V +V L+TGA +A+AV C+P EMR CLPA++SS PPTAECC+K+K+QE C
Sbjct: 10  LCLSASMMATVMVVALITGARLADAVNCNPTEMRPCLPALESSVPPTAECCEKLKEQEPC 69

Query: 65  LCEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
            CEYLKSPI K YLESPNAKKIASSCG+PIPTC
Sbjct: 70  FCEYLKSPIFKRYLESPNAKKIASSCGIPIPTC 102

[Close]
BLAST of CmoCh14G011950 vs. NCBI nr
Match: gi|694439405|ref|XP_009346593.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri])

HSP 1 Score: 111.3 bits (277), Expect = 9.2e-22
Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 1 

Query: 6  CLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEY 65
          CL+VA+V  V L   A   EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ C CEY
Sbjct: 11 CLMVAMV--VALCDEARTVEAVTCSPLELSPCLEAIRSGAPPSATCCEKLKEQQPCFCEY 70

Query: 66 LKSPILKPYLESPNAKKIASSCGVPIPTC 95
          +K+P+LKPY+++PNAKK+AS+CGVP P C
Sbjct: 71 IKNPVLKPYIDNPNAKKVASACGVPFPQC 97

[Close]
BLAST of CmoCh14G011950 vs. NCBI nr
Match: gi|224079367|ref|XP_002305838.1| (hypothetical protein POPTR_0004s09510g [Populus trichocarpa])

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-20
Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 1 

Query: 3  KRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCL 62
          K+  LLV +V +V+LL  A V++AV C+P ++  CLPAI SS PP+  CC K+K+Q+ CL
Sbjct: 2  KKASLLVTMVVVVMLLAEAKVSQAVTCNPAQLSPCLPAISSSSPPSTTCCSKLKEQKPCL 61

Query: 63 CEYLKSPILKPYLESPNAKKIASSCGVPIPTC 95
          C YLK P LK ++ SP A+K+AS+CGVP P+C
Sbjct: 62 CGYLKDPALKQFVSSPGARKVASACGVPYPSC 93

[Close]
BLAST of CmoCh14G011950 vs. NCBI nr
Match: gi|658053478|ref|XP_008362493.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Malus domestica])

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 1 

Query: 6  CLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEY 65
          CL+VAV   V L       EAV C P+E+  CL AI+S  PP+A CC+K+K+Q+ CLCEY
Sbjct: 11 CLMVAVX--VALCDEVRTTEAVTCSPLELSPCLEAIRSXTPPSATCCEKLKEQQPCLCEY 70

Query: 66 LKSPILKPYLESPNAKKIASSCGVPIPTC 95
          +K+P LKPY+ +PNAKK+A +CGVP P C
Sbjct: 71 IKNPALKPYINNPNAKKVAXACGVPFPQC 97

The following BLAST results are available for this feature:
BLAST of CmoCh14G011950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP_VIGUN1.5e-1948.42Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_PRUAR7.5e-1650.00Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP2_HORVU3.2e-1436.17Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=... [more]
NLTPX_ORYSI3.2e-1442.11Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP-2 PE=... [more]
NLTP2_APIGA9.2e-1452.38Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
BLAST of CmoCh14G011950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW09_CUCSA4.9e-3072.04Uncharacterized protein OS=Cucumis sativus GN=Csa_4G141230 PE=4 SV=1[more]
B9H330_POPTR1.2e-2053.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09510g PE=4 SV=1[more]
A5JUZ7_SESIN4.6e-2053.13Lipid transfer protein OS=Sesamum indicum GN=LTP1 PE=2 SV=1[more]
A0A0B2QIV0_GLYSO1.7e-1950.53Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_03... [more]
I1N5L5_SOYBN1.7e-1950.53Uncharacterized protein OS=Glycine max GN=GLYMA_19G002300 PE=4 SV=1[more]
BLAST of CmoCh14G011950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G48750.13.5e-1942.55 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G18280.12.3e-1844.68 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G07747.16.8e-1538.30 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38160.18.9e-1540.70 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G14846.13.4e-1442.86 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of CmoCh14G011950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198657|gb|KGN53815.1|7.0e-3072.04hypothetical protein Csa_4G141230 [Cucumis sativus][more]
gi|659086709|ref|XP_008444077.1|1.3e-2869.89PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo][more]
gi|694439405|ref|XP_009346593.1|9.2e-2256.18PREDICTED: non-specific lipid-transfer protein 2-like [Pyrus x bretschneideri][more]
gi|224079367|ref|XP_002305838.1|1.7e-2053.26hypothetical protein POPTR_0004s09510g [Populus trichocarpa][more]
gi|658053478|ref|XP_008362493.1|3.9e-2055.06PREDICTED: non-specific lipid-transfer protein 2-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G011950.1CmoCh14G011950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 12..92
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 29..94
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 28..94
score: 5.27
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 28..94
score: 5.1
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 1..94
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh14G011950MELO3C010391Melon (DHL92) v3.5.1cmomeB234
CmoCh14G011950Bhi01G001755Wax gourdcmowgoB0309
CmoCh14G011950Bhi01G001684Wax gourdcmowgoB0312
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G011950Cucumber (Chinese Long) v2cmocuB247
CmoCh14G011950Watermelon (Charleston Gray)cmowcgB232
CmoCh14G011950Watermelon (97103) v1cmowmB221
CmoCh14G011950Cucurbita pepo (Zucchini)cmocpeB242
CmoCh14G011950Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G011950Cucumber (Gy14) v2cgybcmoB457
CmoCh14G011950Melon (DHL92) v3.6.1cmomedB266
CmoCh14G011950Silver-seed gourdcarcmoB0445
CmoCh14G011950Cucurbita moschata (Rifu)cmocmoB204
CmoCh14G011950Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G011950Cucurbita maxima (Rimu)cmacmoB463
CmoCh14G011950Wild cucumber (PI 183967)cmocpiB252