CmoCh14G011790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGCTCTTCTCGGTTCTCAACATGCATGGGAGGTGGTCAAAAAAGGTTTCGAAGAACCAAAAGATACCACGGGTTATATGGCGGCACAAAGCAAGGCGTTGAAAGAGGTGCGATCAAAGGATAAGGCGACACTATACATGTTGTTCCGAGCCATTGACGAGTCAGGCTTTGAGAAGATTACCAGTGCAACTACTTCAAAAGAAGTGTGGGACATTTTAGGAAAAGTGTTCAAAGAGGCCGACCAAGTCAAGCAAGTGCGTCTCCAAACTCTTCATTGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAAAAAGTGTATTTGACTACATCACGCGTGTACTAACTGTGATAAACCAACTCAACCGAAACGGAGAAGTATTAACCGAGACGCAGTTGTGGAGAAGATTTTGAGATCATTAACCAACAATTTTGAGAACGTTGTATGCGTGATAGAAGAGTCAAAGGACCTAGCGACGTTCATGGTCGATGAGCTTGCCGGTTCTCTCGAGACACAAGAGCAACGTAAGAAAAAGAAGGAGGAAACACTCGATCAAGCACTTCCAATCAAAGATGAAAAGGTACTCTATTCTCAAAATTTTCAAGGTAGAGGTCGTGATCATGGAAGTCGTGGTCGCAGTGATCAAGGCAGCTGTGTCATGAAGGATTTTATAAGGAGAAGGGACAGTCGAGCCAAGCAAATTGGCGTGGAAGAGGACGCGGTCGAGGAAGAGGCGGCCAATTAA ATGAAAGCTCTTCTCGGTTCTCAACATGCATGGGAGGTGGTCAAAAAAGGTTTCGAAGAACCAAAAGATACCACGGGTTATATGGCGGCACAAAGCAAGGCGTTGAAAGAGGTGCGATCAAAGGATAAGGCGACACTATACATGTTGTTCCGAGCCATTGACGAGTCAGGCTTTGAGAAGATTACCAGTGCAACTACTTCAAAAGAAGTGTGGGACATTTTAGGAAAAGTGTTCAAAGAGGCCGACCAAGTCAAGCAAGTGCGTCTCCAAACTCTTCATTGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAAAAAAAGAGTCAAAGGACCTAGCGACGTTCATGGTCGATGAGCTTGCCGGTTCTCTCGAGACACAAGAGCAACGTAAGAAAAAGAAGGAGGAAACACTCGATCAAGCACTTCCAATCAAAGATGAAAAGGTACTCTATTCTCAAAATTTTCAAGGTAGAGGTCGTGATCATGGAAGTCGTGGTCGCAGTGATCAAGGCAGCTGTGTCATGAAGGATTTTATAAGGAGAAGGGACAGTCGAGCCAAGCAAATTGGCGTGGAAGAGGACGCGGTCGAGGAAGAGGCGGCCAATTAA ATGAAAGCTCTTCTCGGTTCTCAACATGCATGGGAGGTGGTCAAAAAAGGTTTCGAAGAACCAAAAGATACCACGGGTTATATGGCGGCACAAAGCAAGGCGTTGAAAGAGGTGCGATCAAAGGATAAGGCGACACTATACATGTTGTTCCGAGCCATTGACGAGTCAGGCTTTGAGAAGATTACCAGTGCAACTACTTCAAAAGAAGTGTGGGACATTTTAGGAAAAGTGTTCAAAGAGGCCGACCAAGTCAAGCAAGTGCGTCTCCAAACTCTTCATTGCGAGTTGGAGAGCATGAAGATGAAGGAGTCAAAAAAAGAGTCAAAGGACCTAGCGACGTTCATGGTCGATGAGCTTGCCGGTTCTCTCGAGACACAAGAGCAACGTAAGAAAAAGAAGGAGGAAACACTCGATCAAGCACTTCCAATCAAAGATGAAAAGGTACTCTATTCTCAAAATTTTCAAGGTAGAGGTCGTGATCATGGAAGTCGTGGTCGCAGTGATCAAGGCAGCTGTGTCATGAAGGATTTTATAAGGAGAAGGGACAGTCGAGCCAAGCAAATTGGCGTGGAAGAGGACGCGGTCGAGGAAGAGGCGGCCAATTAA
BLAST of CmoCh14G011790 vs. TrEMBL
Match: A0A151RCL3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_038469 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.7e-38 Identity = 109/205 (53.17%), Postives = 125/205 (60.98%), Query Frame = 1
BLAST of CmoCh14G011790 vs. TrEMBL
Match: A0A151RNB3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_034467 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.9e-35 Identity = 101/181 (55.80%), Postives = 124/181 (68.51%), Query Frame = 1
BLAST of CmoCh14G011790 vs. TrEMBL
Match: A0A059QBK0_PHAVU (Polyprotein OS=Phaseolus vulgaris PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34 Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1
BLAST of CmoCh14G011790 vs. TrEMBL
Match: A0A151QV96_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_044903 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28 Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 1
BLAST of CmoCh14G011790 vs. TrEMBL
Match: A0A151SYY3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_015466 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27 Identity = 84/213 (39.44%), Postives = 115/213 (53.99%), Query Frame = 1
BLAST of CmoCh14G011790 vs. TAIR10
Match: AT1G48720.1 (AT1G48720.1 unknown protein) HSP 1 Score: 64.3 bits (155), Expect = 9.7e-11 Identity = 27/69 (39.13%), Postives = 45/69 (65.22%), Query Frame = 1
BLAST of CmoCh14G011790 vs. TAIR10
Match: AT3G21000.1 (AT3G21000.1 Gag-Pol-related retrotransposon family protein) HSP 1 Score: 48.9 bits (115), Expect = 4.2e-06 Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = 1
BLAST of CmoCh14G011790 vs. NCBI nr
Match: gi|1012328580|gb|KYP40213.1| (hypothetical protein KK1_038469 [Cajanus cajan]) HSP 1 Score: 166.0 bits (419), Expect = 6.7e-38 Identity = 109/205 (53.17%), Postives = 125/205 (60.98%), Query Frame = 1
BLAST of CmoCh14G011790 vs. NCBI nr
Match: gi|823190427|ref|XP_012491142.1| (PREDICTED: uncharacterized protein LOC105803474 [Gossypium raimondii]) HSP 1 Score: 162.9 bits (411), Expect = 5.7e-37 Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 1
BLAST of CmoCh14G011790 vs. NCBI nr
Match: gi|1012332620|gb|KYP44044.1| (hypothetical protein KK1_034467 [Cajanus cajan]) HSP 1 Score: 156.0 bits (393), Expect = 7.0e-35 Identity = 101/181 (55.80%), Postives = 124/181 (68.51%), Query Frame = 1
BLAST of CmoCh14G011790 vs. NCBI nr
Match: gi|545693870|gb|AGW47867.1| (polyprotein [Phaseolus vulgaris]) HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34 Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 1
BLAST of CmoCh14G011790 vs. NCBI nr
Match: gi|1012321727|gb|KYP34173.1| (hypothetical protein KK1_044903 [Cajanus cajan]) HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28 Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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