CmoCh14G011380 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh14G011380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
LocationCmo_Chr14 : 8081973 .. 8086011 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCAAGACGAGGAAAATGGAAGGGAGATCAATGATCTAGTTGAAGAAGTCAAGAAGAATGAGGAGGAACTGGAAGATGATATTCATTTGGCACTTATAACAAGAAGACTTGTTAAAACTCAAGTTACGGAGAATGATGTTGATGATCAAAGAGACAACCTGTTCCACACGCGGTGTTTCGTCAAGGGGACTGCTTGTAGTCTTGTCATTGATAGTGGAAGTTGCACCAATGTTGTAAGTACCATGTTGATCAAAAGGTTACAAATTCCAACCCAAAATCATCCTAAACCTTACAAGCTCCAATGGCTCAATGATAGTGGAACAATGAAGGTAGTTTCCCAAGCTTTAATATCTTTTACTTTTGGAAAATATAAAGATGAAGTTCTTTGTGATGTATTATTACCAATGCAAGCTGGAGATATATTGCTTGGCCGACCATGGCAATTTGACAGGAGGGTTATGTATGATGGTTATTTGAATAGGTATTCTTTTGTAAAAGATGGTAGAAAAACCACTCTTGTACCTTTGAGTTCAGCAAATGTATTTGCTGATCAATTAAAATTGGAGGAAAGAAAGAAAGAGTTTGAGGAAAAAGAGTTAAAAGAAAACAAGAGTTTGACTGAAAAAATAGAGAAAAAGAGAAGAGAAAAAGAGATGAATGAAAAAAGAGATGAAATTGAAGAAAAAAGGAAGAGAGAGAGTTATTTGGCTGCAGTTGGAGAGGTGAGAAGGTTTTCACAAAAAGCAATCTTTGTACTTATGTACAATGGAGGATTTTTGGTCTCTAACTATAACAACTTGGCTTTGCCTAGTGTTTTTCAATCTCTTTTACATGAATTTGAAGACATGTTTCAAGATAAAGAAATACCTCCCATTAGAGGTACTGAACATAAAATAGATTTCATTCCAAGGACTGCCATTCCTTATAAGCCAGCTTATCGAGTCAATCCAACCGAGACAAAAGAAATTCAAAGGCAAGTGGAGGAGCTCATGGAGAAGGGCTATGTACGAGAAAGTTTGAGTCCATGTTCTATATGACACTTATTGGTGCCAAAGAAAGATGAAACTTGGCGCATATGCATGGATAATAGAGTGATCAACAAAATCACGGTAAAGTATCGACATCCTATTCCTAGGTTAGACGATATACTTGATTTATTGCATGATTCGTGTCTATTTATAAAAATTATTTTGAAATCTGGATATCATCAAAATAGAATGCACGTTGGAGATGAATGGAAAACAACTTTCAATATTAAGTTTGGATTGTATGAATGGCTTGTTATGCCTTTTAGATTAACTAATACTCCTAGTACACCTATGCGCTTGATATATAATGTTTTGGGAAAATATATGAGAAAACATGTTGTTGGTTATATTGTTGATATTATAATGTATTTGAAGATTTTGCTTGAGCATGTGGAGCATGTTAAATTAGTTTTGATTACACATAGAAAAGAGAAATTTAATTTTAATAAGGGTAGTTTTTGCATGGAAAAAGTTCACTCTATTGGCTTCATAGTTGATAAAAGTAGAGTAGCTTTAGATAGAGACAAAGTTAAATTCATTAAGGATTTGCCAACACCAAAAAGTGCACGTAAATTTCGGAGTTTTCATGAGTTAGCTAATGTAATAACCCGAAAATAATAAATAAATTAATTAATTAATTAAATAAAAAATAATAAAAAATAATAATAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTGGTTGAAGGGAAAAGAAAGAAAAGAGAGGAAGATGGAGGTGTGGGAGGTGGTTGGCGTTGGCAAGGCCGACGAGGAAGCACCAAAAAAAAAAAAACATCGAAGAAACAGAGGAAGAGGGAAACAGAAAACAGGGAGTGTTATAATCCGTGTTTTCCGACAAAACCTTAAAGTTTTTTGGCGTTCGCTGTGACAACGTGCAAACGTGAGGATGGGGAGACGATTGTGAAGGCTTTTCAGCCATTGAAGCTCTGAACTAAGCTGATTTAAGCGGTTGTCGCGAAGGTAACGAAAAACCCATATCACCGAACCTTTAAATCTCGATATCTTGGTTCGTATTGTATAATAAGTTATGAAATAGGGCTTGTTAGAAACGTAATAAGGAGATCTATAAAGTTGTAGAAGGAATCAGAATGAAATTCGAACCGTAGAAGGAGAATATGACTTCGGGATATAGTAGGTATTAACAGAAAAGATGGAAAATTTCAGAAAAACGCAAGGAAGAAGAAGAAGCGCGTGCACTACACGCAGGCGCGTGAGGGCCGCGACTGGGCGTGCGACTGGCGTGCTCCTGGCGCGTGGGACAGCCACACCGAGGCGCGTGAGGGCGCGTGAAGCATCAGTTCGATTCCCGGTTTGTCCCGTTCGATTTGTTTTGACCTGTTCTACCTAGATTGACCTATACTTACCTTGAAAATGGTGAAATATAGGTCTAATTGGAAGGCATTGTGTTGAAATACCCTATTAAATGTACAATCAAGAGAGAAAGGGATTCGAAACCAGGTAAGTAGCGTATCGACCTTTGAACTAGTTCTTAACTTGTTTTACAACATGTGAGTATGTTGTTTACCTGATTAAGAGCTTAATAAGTTATGATGAGCTTTGATGATAGTTCGTGTTTATTGTATATTGTGACTGCTTGCCTGTGATGTAAGCGTGATATGAACGATTGTCAGAATGTTCTATGTGTTGATCATGATATATGTATGAAAGCATGCAGTAACTGTGAGTATGTTATGCATGTTAATGGAAAGGTTATGATTCTAGATATGCTTATTGGTGGTTGAGCTATGGCTTATTTACTGAGTATGATAGTCTACTAATTCCCGCGGAGTTCCTGGCCAATGCGCTGTGTGCTAAGTCAGGGAGCATGAGTACTCCTGACCGTTGGTATATGAGATAAACAGGCCGCCAGAGCAATTAGTAGACGGGCCGTATTTGACCGAGAGCGAGTCTTACATACGAGTCCGAAAATTCTAGATAAGCATATCGAGAGAGAGTCAATAACCTAGCTGGAGGTAGCTGAGATACCTCATTAACGAACCGATGACCCTAGTAAGAGAACTAGGAGTCAATGATGAATAAAACCTAAAAACATCTGGAAGGATTAGTTATGAACTCTTGAATGATAAGCTAGCTACTTACCGAGTAATCTAATTACTCATCAAAATTATTATAACTTTTCTTTCCAGATTTAGATGATGCAGGCCAACCGAGGACGGGACCAGCGGACTGAAGACTACTGGGAATCCATGTCTGGGTCTGTTTTGTATAATTATGTTTTCGTTGTCAAGAATTTACTCCGGTTGTTTTAAGTTTAAAATAGCACCGGTTTTAAATGTTTTACTGGATGTTTTTTTTAAATATTTTGAGATTATGGTTGGGTGTTAGAGTATGTTGTCGTTGATGATGGTAACTCCTGTTAATCGCGTTGACGATGAGCGGGCGTTACAAGTTGGTATCAGAGCCTAGGTTATAGGTTCTGTAGACAGTCTAGAATAGACAGTATGGATCCCGTTAGTCCAGCCCAACGGTATCTCACCTCGGTCAGGTAAGTGATGCATGACTAAATTGTATGAAAGAATAGTATGAAAGTTTAAAAGAATTGATTATGAATACTTAATTATGTGTATAACAGATATGGTAGTGTTAAAATGTTTAGACCCTAGAATGTCCAATGTGGACCTGGGGGTTGAGGGGCAGCCTATAGAAAGAACTGCTCCAGGAGTGGCGATTCCGGTGACTACTTCTCAGTCGGCATCTAGAGATCAGCCGACTGTTGTTATTACTCTGGAGGCCTTGCAATCGCTGATTCAAAGTTAAGTGAATCAAGCGGTGCAGAGCCGAATGGATTAGGTGGTACAGATAGCTTTTGTTGGTTTTGGAAGGTGGGCGGCTCCGACAGCACCTGTACCTAGCCATGTGACTTTAGTGCCTGAAGCACAAGTAGGTGTTCAGGTAGCGATACCTCGAACAATTTCGAAGGAGCTACCT

mRNA sequence

ATGAACCAAGACGAGGAAAATGGAAGGGAGATCAATGATCTAGTTGAAGAAGTCAAGAAGAATGAGGAGGAACTGGAAGATGATATTCATTTGGCACTTATAACAAGAAGACTTGTTAAAACTCAAGTTACGGAGAATGATGTTGATGATCAAAGAGACAACCTGTTCCACACGCGGTGTTTCGTCAAGGGGACTGCTTGTAGTCTTGTCATTGATAGTGGAAGTTGCACCAATGTTGTAAGTACCATGTTGATCAAAAGGTTACAAATTCCAACCCAAAATCATCCTAAACCTTACAAGCTCCAATGGCTCAATGATAGTGGAACAATGAAGGTAGTTTCCCAAGCTTTAATATCTTTTACTTTTGGAAAATATAAAGATGAAGTTCTTTGTGATGTATTATTACCAATGCAAGCTGGAGATATATTGCTTGGCCGACCATGGCAATTTGACAGGAGGGTTATGTATGATGGTTATTTGAATAGTGTTTTTCAATCTCTTTTACATGAATTTGAAGACATGTTTCAAGATAAAGAAATACCTCCCATTAGAGGTTATGATTCTAGATATGCTTATTGGTGGTTGAGCTATGGCTTATTTACTGAGTATGATAGTCTACTAATTCCCGCGGAGTTCCTGGCCAATGCGCTGTGTGCTAAGTCAGGGAGCATGAGTACTCCTGACCGTTGGTGGGCGGCTCCGACAGCACCTGTACCTAGCCATGTGACTTTAGTGCCTGAAGCACAAGTAGGTGTTCAGGTAGCGATACCTCGAACAATTTCGAAGGAGCTACCT

Coding sequence (CDS)

ATGAACCAAGACGAGGAAAATGGAAGGGAGATCAATGATCTAGTTGAAGAAGTCAAGAAGAATGAGGAGGAACTGGAAGATGATATTCATTTGGCACTTATAACAAGAAGACTTGTTAAAACTCAAGTTACGGAGAATGATGTTGATGATCAAAGAGACAACCTGTTCCACACGCGGTGTTTCGTCAAGGGGACTGCTTGTAGTCTTGTCATTGATAGTGGAAGTTGCACCAATGTTGTAAGTACCATGTTGATCAAAAGGTTACAAATTCCAACCCAAAATCATCCTAAACCTTACAAGCTCCAATGGCTCAATGATAGTGGAACAATGAAGGTAGTTTCCCAAGCTTTAATATCTTTTACTTTTGGAAAATATAAAGATGAAGTTCTTTGTGATGTATTATTACCAATGCAAGCTGGAGATATATTGCTTGGCCGACCATGGCAATTTGACAGGAGGGTTATGTATGATGGTTATTTGAATAGTGTTTTTCAATCTCTTTTACATGAATTTGAAGACATGTTTCAAGATAAAGAAATACCTCCCATTAGAGGTTATGATTCTAGATATGCTTATTGGTGGTTGAGCTATGGCTTATTTACTGAGTATGATAGTCTACTAATTCCCGCGGAGTTCCTGGCCAATGCGCTGTGTGCTAAGTCAGGGAGCATGAGTACTCCTGACCGTTGGTGGGCGGCTCCGACAGCACCTGTACCTAGCCATGTGACTTTAGTGCCTGAAGCACAAGTAGGTGTTCAGGTAGCGATACCTCGAACAATTTCGAAGGAGCTACCT
Homology
[Close]
BLAST of CmoCh14G011380 vs. TrEMBL
Match: A5AQZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034834 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.6e-40
Identity = 73/130 (56.15%), Postives = 98/130 (75.38%), Query Frame = 1 

Query: 32  ALITRRLVKTQVTENDVDDQRDNLFHTRCFVKGTACSLVIDSGSCTNVVSTMLIKRLQIP 91
           +L+ R  +  Q  ++D++ QR+N+FHTRC +    CS++ID GSCTNV ST L++ L +P
Sbjct: 392 SLVARCALSAQAKKDDLEQQRENIFHTRCHINNKVCSMIIDGGSCTNVASTTLVENLNLP 451

Query: 92  TQNHPKPYKLQWLNDSGTMKVVSQALISFTFGKYKDEVLCDVLLPMQAGDILLGRPWQFD 151
           T  HP+PYKLQWLND G  KV  + L+SF+ G+YKDEVLCD+ +PM AG ILLGRPWQFD
Sbjct: 452 TLKHPRPYKLQWLNDFGEDKVNKEVLVSFSIGRYKDEVLCDI-VPMHAGHILLGRPWQFD 511

Query: 152 RRVMYDGYLN 162
           R+V +DG+ N
Sbjct: 512 RKVNHDGFKN 520

[Close]
BLAST of CmoCh14G011380 vs. TrEMBL
Match: E7BQD7_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.1e-38
Identity = 86/167 (51.50%), Postives = 114/167 (68.26%), Query Frame = 1 

Query: 16  EEVKKNEEELEDDIHLA--LITRRLVKTQVTENDVDDQRDNLFHTRCFVKGTACSLVIDS 75
           EE    +EE E++I     L+ RR++ +Q+ E D   QR+NLFHTRCFV+G  CSL+ID 
Sbjct: 325 EEDGDYDEEFEEEIPSGDLLMVRRMLGSQIKEEDTG-QRENLFHTRCFVQGKVCSLIIDG 384

Query: 76  GSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTFGKYKDEVLCDV 135
           GSCTNV ST L+ +L++ T+ HPKPYKLQWLN+S  M V  Q  I F  GKY+D VLCDV
Sbjct: 385 GSCTNVASTRLVSKLKLETKPHPKPYKLQWLNESVEMLVNKQVEICFKIGKYEDVVLCDV 444

Query: 136 LLPMQAGDILLGRPWQFDRRVMYDGYLNSVFQSLLHEFEDMFQDKEI 181
            +PM+A  +LLGRPWQFDR+  +DGY N        ++  M+ D++I
Sbjct: 445 -VPMEASHLLLGRPWQFDRKANHDGYSN--------KYSFMYHDQKI 481

[Close]
BLAST of CmoCh14G011380 vs. TrEMBL
Match: Q6VPE8_PETHY (Putative gag-pol polyprotein OS=Petunia hybrida PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 83/167 (49.70%), Postives = 117/167 (70.06%), Query Frame = 1 

Query: 4   DEENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDDQRDNLFHTRCFVK 63
           +E+ G E ++ VEE  +++   +++ H  L+ RR +   + E+    QR+NLFH RC VK
Sbjct: 416 EEDEGVEGDEGVEEDGEDDTVEDEEPHTFLVVRRSLGAMIAEDGETLQRENLFHARCRVK 475

Query: 64  GTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTFG 123
           G  CS++IDSGSCTNVVS  LI +L++PT  HPKPY+LQWL++ G +KVV QA+I F  G
Sbjct: 476 GVVCSMIIDSGSCTNVVSQSLITQLKLPTMKHPKPYRLQWLSECGELKVVKQAMIKFKMG 535

Query: 124 KYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLNSVFQSLLHE 171
            Y DE L DV +PMQA  +L GRPWQFDR+V+++G +N+   +L HE
Sbjct: 536 SYVDEHLFDV-VPMQACHLLFGRPWQFDRQVVHNGRVNN--YTLQHE 579

[Close]
BLAST of CmoCh14G011380 vs. TrEMBL
Match: E7BQD6_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.0e-37
Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 1 

Query: 4   DEENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDDQRDNLFHTRCFVK 63
           +EE+G    +  EE+   +          L+ RR++ +Q+ E D   QR+NLFH RCFV+
Sbjct: 324 EEEDGDYDKEFGEEIPSGD---------LLMVRRMLGSQIKEEDTS-QRENLFHIRCFVQ 383

Query: 64  GTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTFG 123
           G  CSL+ID GSCTNV ST L+ RL++ T+ HPKPYKLQWLN+S  M V  Q  I F  G
Sbjct: 384 GKVCSLIIDGGSCTNVASTRLVSRLKLETKPHPKPYKLQWLNESVEMLVNKQVEICFKIG 443

Query: 124 KYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLNSVFQSLLHEFEDMFQDKEI 181
           KY+D VLCDV +PM+A  +LLGRPWQFDR+  +DGY N        ++  M+ D++I
Sbjct: 444 KYEDVVLCDV-VPMEASHLLLGRPWQFDRKANHDGYSN--------KYSFMYHDQKI 481

[Close]
BLAST of CmoCh14G011380 vs. TrEMBL
Match: A0A151R7Z9_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_040065 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.0e-37
Identity = 80/169 (47.34%), Postives = 116/169 (68.64%), Query Frame = 1 

Query: 1   MNQDEENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDDQRDNLFHTRC 60
           M +D +   E     EEV+K EE L+ DI   L+ RRL+ +Q+   +   QR+N+FHTRC
Sbjct: 226 MKEDGQITSESEPDEEEVEKEEEALQGDI---LMVRRLLGSQIQPLE-QTQRENIFHTRC 285

Query: 61  FVKGTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISF 120
            +KG  CSL++D GSCTNV S+ L+ +L + T+ HP+PYKLQWL++ G MKV  Q  + F
Sbjct: 286 SIKGKLCSLIVDGGSCTNVASSRLVSKLNLGTKPHPRPYKLQWLSEDGEMKVTQQVEVCF 345

Query: 121 TFGKYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLNSVFQSLLH 170
           + G+Y D+VLCDV +PM+A  +LLGRPWQ+D + ++DG+ N +  S +H
Sbjct: 346 SIGRYNDKVLCDV-VPMEATHLLLGRPWQYDTKALHDGFTNKI--SFMH 387

[Close]
BLAST of CmoCh14G011380 vs. NCBI nr
Match: gi|823218650|ref|XP_012442006.1| (PREDICTED: uncharacterized protein LOC105767021 [Gossypium raimondii])

HSP 1 Score: 191.0 bits (484), Expect = 2.6e-45
Identity = 97/190 (51.05%), Postives = 129/190 (67.89%), Query Frame = 1 

Query: 5   EENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDD--QRDNLFHTRCFV 64
           E    E+    E V  NEEE+E  +   L+   +VK  ++   +DD  QR N+FHTRC V
Sbjct: 329 ESEEEELEHEAENVSDNEEEVEHALDGELL---VVKRSLSIQSIDDEQQRKNIFHTRCQV 388

Query: 65  KGTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTF 124
           +G  CS++ID GSCTNV ST+++++L +PT  HP PYKLQWLND G +KV  Q L+SF+ 
Sbjct: 389 QGKLCSVIIDGGSCTNVASTLMVEKLNLPTTKHPTPYKLQWLNDGGELKVTKQVLVSFSI 448

Query: 125 GKYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLN--SVFQSLLHEFEDMFQDK-- 184
           GKY DEVLCDV+ PM AG +LLGRPWQFDRRVM+DGY N  S      ++F+D+F D+  
Sbjct: 449 GKYSDEVLCDVV-PMHAGHLLLGRPWQFDRRVMHDGYSNRYSFKHMGRNDFKDVFPDEVP 508

Query: 185 -EIPPIRGYD 188
             +PP+RG +
Sbjct: 509 SGLPPLRGIE 514

[Close]
BLAST of CmoCh14G011380 vs. NCBI nr
Match: gi|823145103|ref|XP_012472415.1| (PREDICTED: uncharacterized protein LOC105789589 [Gossypium raimondii])

HSP 1 Score: 188.3 bits (477), Expect = 1.7e-44
Identity = 99/211 (46.92%), Postives = 134/211 (63.51%), Query Frame = 1 

Query: 5   EENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDD--QRDNLFHTRCFV 64
           E    E+ D +E V  N+EE+E  +   L+   +VK  ++   +DD  QR+N+FHTRC V
Sbjct: 355 ESEEEELEDELEIVSDNDEEVEHALDGELL---IVKRSLSIQSIDDEQQRENIFHTRCQV 414

Query: 65  KGTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTF 124
           +G  CS++ID GSCTNV ST+++++L +PT  HP PYKLQWLND G +KV  Q L+SF+ 
Sbjct: 415 QGKLCSVIIDGGSCTNVASTLMVEKLNLPTTKHPTPYKLQWLNDGGELKVTKQVLVSFSI 474

Query: 125 GKYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLN-------------------SV 184
           GKY DEVLCDV+ PM AG +LLGRPWQFDRRVM+DGY N                    V
Sbjct: 475 GKYSDEVLCDVV-PMHAGHLLLGRPWQFDRRVMHDGYSNRYSFKHLGRNVTLAPLTPKQV 534

Query: 185 FQSLL----HEFEDMFQDK---EIPPIRGYD 188
           ++  L     EF+D+F D+    +PP+RG +
Sbjct: 535 YEDQLKLKNSEFKDVFPDEVPSGLPPLRGIE 561

[Close]
BLAST of CmoCh14G011380 vs. NCBI nr
Match: gi|923929740|ref|XP_013733665.1| (PREDICTED: uncharacterized protein LOC106437302, partial [Brassica napus])

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 108/240 (45.00%), Postives = 143/240 (59.58%), Query Frame = 1 

Query: 4   DEENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDDQRDNLFHTRCFVK 63
           +EEN  E N  VEE    E+ +E ++   LI +R +  Q  E++   QR+N+FH+RC V+
Sbjct: 213 EEENDPESNFEVEE--DLEQPVEGEL---LIVKRSLSLQSVEDE--QQRENIFHSRCQVQ 272

Query: 64  GTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTFG 123
           G  CS++ID GSCTNV ST+++++L + T  HP PYKLQWLND G +KV  Q L+SF+ G
Sbjct: 273 GKVCSIIIDGGSCTNVASTLMVEKLGLSTTKHPNPYKLQWLNDGGELKVTKQVLVSFSIG 332

Query: 124 KYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLNSV-FQSL-----------LHEF 183
           KY DEVLCDV +PM AG +LLGRPWQFDRRVM+DGY N   F+ L             EF
Sbjct: 333 KYSDEVLCDV-VPMHAGHLLLGRPWQFDRRVMHDGYTNRYSFKHLGKNVTLAPLTPKQEF 392

Query: 184 EDMFQDK---EIPPIRGYDSRYAYWWLSYGLFTEYDSLLIPAEFLANALCAKSGSMSTPD 229
           ED+F D+    +PPIRG                E+   L+P   L N L  +S    T +
Sbjct: 393 EDIFPDEIPSGLPPIRG---------------IEHQIDLVPGAALPNRLAYRSNPEETKE 429

[Close]
BLAST of CmoCh14G011380 vs. NCBI nr
Match: gi|823241507|ref|XP_012453402.1| (PREDICTED: uncharacterized protein LOC105775432 [Gossypium raimondii])

HSP 1 Score: 184.5 bits (467), Expect = 2.4e-43
Identity = 98/211 (46.45%), Postives = 132/211 (62.56%), Query Frame = 1 

Query: 5   EENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDD--QRDNLFHTRCFV 64
           E    E+ D  E V  NEEE+E  +   L+   +VK  ++   +DD  QR+N+FHTRC V
Sbjct: 139 ESEEEELEDEPETVSDNEEEVEHALDGELL---VVKRSLSIQSIDDEQQRENIFHTRCQV 198

Query: 65  KGTACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTF 124
           +G  CS++ID GSCTNV ST+++++L +PT  HP PYKLQWLND G +KV  Q L+SF+ 
Sbjct: 199 QGKLCSVIIDGGSCTNVASTLMVEKLNLPTTKHPTPYKLQWLNDGGELKVTKQVLVSFSI 258

Query: 125 GKYKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLN-------------------SV 184
           GKY DEVLCDV+ PM AG +LLG PWQFDRRVM+DGY N                    V
Sbjct: 259 GKYSDEVLCDVV-PMHAGHLLLGCPWQFDRRVMHDGYSNRYSFKHMGRNVTLAPLTPKQV 318

Query: 185 FQSLL----HEFEDMFQDK---EIPPIRGYD 188
           ++  L     +F+D+F D+    +PP+RG +
Sbjct: 319 YEDQLKLKISDFKDVFPDEVPSGLPPLRGIE 345

[Close]
BLAST of CmoCh14G011380 vs. NCBI nr
Match: gi|823232051|ref|XP_012448731.1| (PREDICTED: uncharacterized protein LOC105771899 [Gossypium raimondii])

HSP 1 Score: 183.0 bits (463), Expect = 7.0e-43
Identity = 93/190 (48.95%), Postives = 128/190 (67.37%), Query Frame = 1 

Query: 5   EENGREINDLVEEVKKNEEELEDDIHLALITRRLVKTQVTENDVDDQRDNLFHTRCFVKG 64
           E    + N+ VE++++ E+  + +    L+ +R +  Q  END   QR+N+FHTRC V+G
Sbjct: 257 ESKSEQENEAVEQLEEEEDIEQAENGEILVVKRSLTLQGVEND--QQRENIFHTRCQVQG 316

Query: 65  TACSLVIDSGSCTNVVSTMLIKRLQIPTQNHPKPYKLQWLNDSGTMKVVSQALISFTFGK 124
             C ++ID GSCTNV ST+++++L + T  HP PYKLQWLND G +KV  Q LISFT GK
Sbjct: 317 KICCVIIDGGSCTNVASTLMVEKLGLATTKHPHPYKLQWLNDGGELKVTKQVLISFTIGK 376

Query: 125 YKDEVLCDVLLPMQAGDILLGRPWQFDRRVMYDGYLNSVFQSLLH----EFEDMFQDK-- 184
           Y+DEVLCDV +PM AG ILLG PWQFD+R ++DGY N    S  H    EF+D+F ++  
Sbjct: 377 YQDEVLCDV-VPMHAGHILLGCPWQFDKRAIHDGYTNRF--SFKHMGRMEFQDVFPEEIP 436

Query: 185 -EIPPIRGYD 188
             +PPIRG +
Sbjct: 437 SGLPPIRGIE 441

The following BLAST results are available for this feature:
BLAST of CmoCh14G011380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh14G011380 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AQZ7_VITVI8.6e-4056.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034834 PE=4 SV=1[more]
E7BQD7_PEA2.1e-3851.50Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1[more]
Q6VPE8_PETHY1.1e-3749.70Putative gag-pol polyprotein OS=Petunia hybrida PE=4 SV=1[more]
E7BQD6_PEA4.0e-3748.02Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1[more]
A0A151R7Z9_CAJCA4.0e-3747.34Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_... [more]
BLAST of CmoCh14G011380 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh14G011380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|823218650|ref|XP_012442006.1|2.6e-4551.05PREDICTED: uncharacterized protein LOC105767021 [Gossypium raimondii][more]
gi|823145103|ref|XP_012472415.1|1.7e-4446.92PREDICTED: uncharacterized protein LOC105789589 [Gossypium raimondii][more]
gi|923929740|ref|XP_013733665.1|1.1e-4345.00PREDICTED: uncharacterized protein LOC106437302, partial [Brassica napus][more]
gi|823241507|ref|XP_012453402.1|2.4e-4346.45PREDICTED: uncharacterized protein LOC105775432 [Gossypium raimondii][more]
gi|823232051|ref|XP_012448731.1|7.0e-4348.95PREDICTED: uncharacterized protein LOC105771899 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021109Peptidase_aspartic_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G011380.1CmoCh14G011380.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 52..148
score: 3.8
NoneNo IPR availableunknownCoilCoilcoord: 8..28
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G011380Cucumber (Gy14) v1cgycmoB0928
CmoCh14G011380Cucurbita maxima (Rimu)cmacmoB245
CmoCh14G011380Cucurbita maxima (Rimu)cmacmoB463
CmoCh14G011380Wild cucumber (PI 183967)cmocpiB236
CmoCh14G011380Cucumber (Chinese Long) v2cmocuB233
CmoCh14G011380Melon (DHL92) v3.5.1cmomeB219
CmoCh14G011380Watermelon (Charleston Gray)cmowcgB208
CmoCh14G011380Watermelon (Charleston Gray)cmowcgB229
CmoCh14G011380Watermelon (97103) v1cmowmB215
CmoCh14G011380Cucurbita pepo (Zucchini)cmocpeB242
CmoCh14G011380Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G011380Bottle gourd (USVL1VR-Ls)cmolsiB231
CmoCh14G011380Bottle gourd (USVL1VR-Ls)cmolsiB245
CmoCh14G011380Cucumber (Gy14) v2cgybcmoB286
CmoCh14G011380Silver-seed gourdcarcmoB0953
CmoCh14G011380Cucumber (Chinese Long) v3cmocucB0277
CmoCh14G011380Watermelon (97103) v2cmowmbB231
CmoCh14G011380Wax gourdcmowgoB0291
CmoCh14G011380Wax gourdcmowgoB0312
CmoCh14G011380Cucurbita moschata (Rifu)cmocmoB204