CmoCh14G011010 (gene) Cucurbita moschata (Rifu)

NameCmoCh14G011010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP synthase subunit 9, mitochondrial
LocationCmo_Chr14 : 7259663 .. 7259890 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCCGGAGCTGCTACAATTGCTTCACCGGGAGCTGCTGTCGGTATTGGAAACGTGTTCAGTTCTTTGATCCATTCCGTGGCGAGAAATCCCTCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGGCTTTGCTCTAACAGAAGCTATTGCATTGTTTGCTCCAATGATGGCCTTTTTGATCTCATTCGTATTCCGATCGAAGAAGGGTTCAGTCTCATAA

mRNA sequence

ATGGGTGCCGGAGCTGCTACAATTGCTTCACCGGGAGCTGCTGTCGGTATTGGAAACGTGTTCAGTTCTTTGATCCATTCCGTGGCGAGAAATCCCTCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGGCTTTGCTCTAACAGAAGCTATTGCATTGTTTGCTCCAATGATGGCCTTTTTGATCTCATTCGTATTCCGATCGAAGAAGGGTTCAGTCTCATAA

Coding sequence (CDS)

ATGGGTGCCGGAGCTGCTACAATTGCTTCACCGGGAGCTGCTGTCGGTATTGGAAACGTGTTCAGTTCTTTGATCCATTCCGTGGCGAGAAATCCCTCATTGGCTAAACAATCATTTGGTTATGCCATTTTGGGCTTTGCTCTAACAGAAGCTATTGCATTGTTTGCTCCAATGATGGCCTTTTTGATCTCATTCGTATTCCGATCGAAGAAGGGTTCAGTCTCATAA
BLAST of CmoCh14G011010 vs. Swiss-Prot
Match: ATP9_MALDO (ATP synthase subunit 9, mitochondrial OS=Malus domestica GN=ATP9 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.2e-25
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIAS GAA+GIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA FAPMMA
Sbjct: 8  IGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMA 67

Query: 61 FLISFVFRS 70
          FLIS VFRS
Sbjct: 68 FLISSVFRS 76

BLAST of CmoCh14G011010 vs. Swiss-Prot
Match: ATP9_BRANA (ATP synthase subunit 9, mitochondrial OS=Brassica napus GN=ATP9 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-25
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIAS GAA+GIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 8  IGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 67

Query: 61 FLISFVF 68
          FLI FVF
Sbjct: 68 FLILFVF 74

BLAST of CmoCh14G011010 vs. Swiss-Prot
Match: ATP9_PETHY (ATP synthase subunit 9, mitochondrial OS=Petunia hybrida GN=ATP9 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-23
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIA  GAA+GIGNVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIALFA MMA
Sbjct: 8  MGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMA 67

Query: 61 FLISFVF 68
          FLISFVF
Sbjct: 68 FLISFVF 74

BLAST of CmoCh14G011010 vs. Swiss-Prot
Match: ATP9_SOLLC (ATP synthase subunit 9, mitochondrial OS=Solanum lycopersicum GN=ATP9 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-23
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIA  GAA+GIGNVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIALFA MMA
Sbjct: 8  MGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMA 67

Query: 61 FLISFVF 68
          FLISFVF
Sbjct: 68 FLISFVF 74

BLAST of CmoCh14G011010 vs. Swiss-Prot
Match: ATP9_TOBAC (ATP synthase subunit 9, mitochondrial OS=Nicotiana tabacum GN=ATP9 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-23
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIA  GAA+GIGNVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIALFA MMA
Sbjct: 8  MGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMA 67

Query: 61 FLISFVF 68
          FLISFVF
Sbjct: 68 FLISFVF 74

BLAST of CmoCh14G011010 vs. TrEMBL
Match: G3EU40_CUCME (ATP synthase subunit 9, mitochondrial OS=Cucumis melo subsp. melo GN=atp9 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.8e-25
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIAS GAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFA MMA
Sbjct: 8  MGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFALMMA 67

Query: 61 FLISFVFRSKK 72
          FLISFVFRSK+
Sbjct: 68 FLISFVFRSKR 78

BLAST of CmoCh14G011010 vs. TrEMBL
Match: W5XKB5_AEGLO (ATP synthase subunit 9, mitochondrial OS=Aegilops longissima PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-24
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIA  GAAVGIGNV SSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 8  IGAGAATIALAGAAVGIGNVLSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 67

Query: 61 FLISFVFRSKKGS 74
          FLISFVFRS K S
Sbjct: 68 FLISFVFRSHKKS 80

BLAST of CmoCh14G011010 vs. TrEMBL
Match: Q37724_SECCE (ATP synthase subunit 9, mitochondrial OS=Secale cereale GN=atp9 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-24
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIA  GAAVGIGNV SSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 8  IGAGAATIALAGAAVGIGNVLSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 67

Query: 61 FLISFVFRSKKGS 74
          FLISFVFRS K S
Sbjct: 68 FLISFVFRSHKKS 80

BLAST of CmoCh14G011010 vs. TrEMBL
Match: W5AAD2_WHEAT (Uncharacterized protein OS=Triticum aestivum GN=atp9 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-24
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 1

Query: 1   MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
           +GAGAATIA  GAAVGIGNV SSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 41  IGAGAATIALAGAAVGIGNVLSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 100

Query: 61  FLISFVFRSKKGS 74
           FLISFVFRS K S
Sbjct: 101 FLISFVFRSHKKS 113

BLAST of CmoCh14G011010 vs. TrEMBL
Match: Q42931_9POAL (ATP synthase subunit 9 OS=Triticum durum x Triticosecale sp. GN=atp9 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.9e-24
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIA  GAAVGIGNV SSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 8  IGAGAATIALAGAAVGIGNVLSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 67

Query: 61 FLISFVFRSKKGS 74
          FLISFVFRS K S
Sbjct: 68 FLISFVFRSHKKS 80

BLAST of CmoCh14G011010 vs. TAIR10
Match: AT2G07671.1 (AT2G07671.1 ATP synthase subunit C family protein)

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-26
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIAS GAA+GIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 19 IGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 78

Query: 61 FLISFVF 68
          FLI FVF
Sbjct: 79 FLILFVF 85

BLAST of CmoCh14G011010 vs. TAIR10
Match: ATMG01080.1 (ATMG01080.1 mitochondrial F0-ATPase subunit 9)

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-26
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIAS GAA+GIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 19 IGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 78

Query: 61 FLISFVF 68
          FLI FVF
Sbjct: 79 FLILFVF 85

BLAST of CmoCh14G011010 vs. TAIR10
Match: ATMG00040.1 (ATMG00040.1 ATP synthase subunit C family protein)

HSP 1 Score: 60.5 bits (145), Expect = 5.2e-10
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLA 36
          +GAGAATIAS GAA+GIGNVFSSLIHSVARNPSLA
Sbjct: 19 IGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLA 53

BLAST of CmoCh14G011010 vs. NCBI nr
Match: gi|345034446|gb|AEN56131.1| (ATPase subunit 9 [Cucumis melo subsp. melo])

HSP 1 Score: 121.7 bits (304), Expect = 5.4e-25
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIAS GAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFA MMA
Sbjct: 8  MGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFALMMA 67

Query: 61 FLISFVFRSKK 72
          FLISFVFRSK+
Sbjct: 68 FLISFVFRSKR 78

BLAST of CmoCh14G011010 vs. NCBI nr
Match: gi|81176510|ref|YP_398394.1| (atp9 (mitochondrion) [Triticum aestivum])

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          +GAGAATIA  GAAVGIGNV SSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 8  IGAGAATIALAGAAVGIGNVLSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 67

Query: 61 FLISFVFRSKKGS 74
          FLISFVFRS K S
Sbjct: 68 FLISFVFRSHKKS 80

BLAST of CmoCh14G011010 vs. NCBI nr
Match: gi|1016880306|ref|YP_009243662.1| (ATPase subunit 9 (mitochondrion) [Cannabis sativa])

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-24
Identity = 66/70 (94.29%), Postives = 67/70 (95.71%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIAS GAA+GIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA FAPMMA
Sbjct: 8  MGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIASFAPMMA 67

Query: 61 FLISFVFRSK 71
          FLIS VFRSK
Sbjct: 68 FLISSVFRSK 77

BLAST of CmoCh14G011010 vs. NCBI nr
Match: gi|849123220|ref|YP_009153923.1| (ATP synthase F1 subunit 9 (mitochondrion) [Gossypium hirsutum])

HSP 1 Score: 118.6 bits (296), Expect = 4.6e-24
Identity = 68/75 (90.67%), Postives = 68/75 (90.67%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIAS GAAVGIGNVFSSLIHSVARNPSLAKQ FGYAILGFALTEAIA FAPMMA
Sbjct: 8  MGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIASFAPMMA 67

Query: 61 FLISFVFRSKKGSVS 76
          FLI  VFRSKK S S
Sbjct: 68 FLILSVFRSKKESFS 82

BLAST of CmoCh14G011010 vs. NCBI nr
Match: gi|661813580|ref|YP_009045770.1| (ATP synthase subunit 9 (mitochondrion) [Batis maritima])

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-24
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 1

Query: 1  MGAGAATIASPGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 60
          MGAGAATIAS GAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA
Sbjct: 8  MGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIALFAPMMA 67

Query: 61 FLISFVFR 69
          FLIS VFR
Sbjct: 68 FLISSVFR 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ATP9_MALDO3.2e-2592.75ATP synthase subunit 9, mitochondrial OS=Malus domestica GN=ATP9 PE=3 SV=1[more]
ATP9_BRANA4.2e-2594.03ATP synthase subunit 9, mitochondrial OS=Brassica napus GN=ATP9 PE=2 SV=1[more]
ATP9_PETHY1.0e-2392.54ATP synthase subunit 9, mitochondrial OS=Petunia hybrida GN=ATP9 PE=2 SV=1[more]
ATP9_SOLLC1.0e-2392.54ATP synthase subunit 9, mitochondrial OS=Solanum lycopersicum GN=ATP9 PE=3 SV=1[more]
ATP9_TOBAC1.0e-2392.54ATP synthase subunit 9, mitochondrial OS=Nicotiana tabacum GN=ATP9 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
G3EU40_CUCME3.8e-2595.77ATP synthase subunit 9, mitochondrial OS=Cucumis melo subsp. melo GN=atp9 PE=3 S... [more]
W5XKB5_AEGLO1.9e-2491.78ATP synthase subunit 9, mitochondrial OS=Aegilops longissima PE=3 SV=1[more]
Q37724_SECCE1.9e-2491.78ATP synthase subunit 9, mitochondrial OS=Secale cereale GN=atp9 PE=3 SV=1[more]
W5AAD2_WHEAT1.9e-2491.78Uncharacterized protein OS=Triticum aestivum GN=atp9 PE=3 SV=1[more]
Q42931_9POAL1.9e-2491.78ATP synthase subunit 9 OS=Triticum durum x Triticosecale sp. GN=atp9 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G07671.12.3e-2694.03 ATP synthase subunit C family protein[more]
ATMG01080.12.3e-2694.03ATMG01080.1 mitochondrial F0-ATPase subunit 9[more]
ATMG00040.15.2e-1091.43ATMG00040.1 ATP synthase subunit C family protein[more]
Match NameE-valueIdentityDescription
gi|345034446|gb|AEN56131.1|5.4e-2595.77ATPase subunit 9 [Cucumis melo subsp. melo][more]
gi|81176510|ref|YP_398394.1|2.7e-2491.78atp9 (mitochondrion) [Triticum aestivum][more]
gi|1016880306|ref|YP_009243662.1|3.5e-2494.29ATPase subunit 9 (mitochondrion) [Cannabis sativa][more]
gi|849123220|ref|YP_009153923.1|4.6e-2490.67ATP synthase F1 subunit 9 (mitochondrion) [Gossypium hirsutum][more]
gi|661813580|ref|YP_009045770.1|7.8e-2497.06ATP synthase subunit 9 (mitochondrion) [Batis maritima][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000454ATP_synth_F0_csu
IPR002379ATPase_proteolipid_c-like_dom
IPR020537ATP_synth_F0_csu_DDCD_BS
Vocabulary: Cellular Component
TermDefinition
GO:0045263proton-transporting ATP synthase complex, coupling factor F(o)
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO:0015991ATP hydrolysis coupled proton transport
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function GO:0005524 ATP binding
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008289 lipid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G011010.1CmoCh14G011010.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000454ATPase, F0 complex, subunit CPRINTSPR00124ATPASECcoord: 39..64
score: 3.0E-30coord: 1..20
score: 3.0E-30coord: 22..37
score: 3.0
IPR000454ATPase, F0 complex, subunit CGENE3DG3DSA:1.20.20.10coord: 1..65
score: 9.2
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 1..63
score: 8.9
IPR002379V-ATPase proteolipid subunit C-like domainunknownSSF81333F1F0 ATP synthase subunit Ccoord: 1..65
score: 2.88
IPR020537ATPase, F0 complex, subunit C, DCCD-binding sitePROSITEPS00605ATPASE_Ccoord: 29..50
scor
NoneNo IPR availableHAMAPMF_01396ATP_synth_c_bactcoord: 1..66
score: 10
NoneNo IPR availablePANTHERPTHR10031ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIALcoord: 1..67
score: 5.8
NoneNo IPR availablePANTHERPTHR10031:SF10SUBFAMILY NOT NAMEDcoord: 1..67
score: 5.8

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh14G011010Watermelon (97103) v2cmowmbB229
CmoCh14G011010Wax gourdcmowgoB0279
CmoCh14G011010Watermelon (Charleston Gray)cmowcgB206
CmoCh14G011010Watermelon (97103) v1cmowmB213
CmoCh14G011010Cucurbita pepo (Zucchini)cmocpeB245
CmoCh14G011010Bottle gourd (USVL1VR-Ls)cmolsiB228